Rw6G033200

Zinc finger MYM-type protein 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000122
Physical Location & Seq
Forward (+)
57696447 .. 57698660
2214 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G033200.1

Sequence Viewer

Length: 1827 bp
ATGGAGAGATTCTTTAAACGAACATCAAATGAGTTATCATCACCCCTCATAGAGAGTGAAAGATCAAAACAGAGTCAGGTAGAAATTGATTTGGCTAATCTTCCTTCTGATCCTGGAGAAAGAACTAAAATTTCAGATTATCATCCCGATATTAGGGATCAAATTAGAAGAGAGTATCTGCTAAGAGATTATCGAGTTCGACTAGAAGCTTCAGTTGATTGCATTCGGTTTCTTCTAAGACAAGGCCTTGCCTTTCGTGGTCATGACGAGTCAGAGAACTCAAGCAATCAAGGTAACTTTCTTCAGCTTTTGCAATTTCTCGTTGATCACAATGATGAAGTGAGAGCTGTTGCATTGAAGAATGCTCCTGCAAATCTTAGATTGACATCTCCTAGGATTCAAAAGGACATTGTTAACGCTGCTGCTGTTGAAACTACAAATGTTATTATGAGAAACATGAGTGATGCCTTTTTTTCTATCCTAGTTGATGAATCTAGGGATGTATATGTGAAGGAGCAAATAGCTGTTACCTTTCGTTATGTGGATAAAAATGGGTGTGTGATTGAATCCTTCATAGGCATTGAACATGTAGCGAGTACTACTGCAATCTCACTTAAGAAAGCTATAGATGCACTATTCTCTAAACATGGATTAAGCTTCTCTAGGCTACGTGGTCAAGGTTACGATGGGGCCAGTAATATGAGTGGAGAACTTAATGGTCTGAAGACCCTTATTTTGAAGGAGAACTCGAGTGCTTTTTATGTTCATTGTTTCGCACATCAGCTTCAATTAGCTTTGGTCAGTGTAGCCAAGAAACATGAAATTGTAGGTGCTTTCTTTGCATCAATTGGTAGTGTTGTAAACATTGTTGGGGCATCTTCTAAACGTCGAGACATTCTGCTAGAAAAGCAAGCTCTTAAAGTCATTGAGGCACTTAAAGTTGGAGAACTTACAAGTGGACACAGACTCAATCAAGAAACTGAAATTAAGCGTTCATGTGATACGCGTTGGAGCTCACATTATGGTACTCTTCTAAACTTTACTGTCATGTTTTCTTCCATAATTGATGTGTTGGATGAAATAGCATTTGATAAAGTGAGTTTTGATCAGAAGCATGAAGCTTTTATTTCTTTGAATTTGCATTTGATGAGAATTATACTTGGAATCACTCATGAGTTATCACAAGCACTACAAAAAGATGATAAGGACATAGTGAATGCTATGGATTTAGTGAAAGTGTGCAAGAGAAAATTGCAGACTTTTAGGGAGAGTGGATGGCTTTCTTTGTTTGAGCAGGTTGTTCTATTTTGTGGAAAAGAGAATATTAGTGTTCCAAACATGGATGATCAATATATATGTCCAGGAAAATCAAGGCGTAGAGCTCCTGAAATGACAAATATGCATTACTATCGCTTTGACTTCTTTTGTGCAGTAATTGATTTCCAACTTCAGGAGCTAGATAACCGTTTCAATGAGGCTACTACTGAACTTCTCCTTTGTTTGGCATCTCTAAGTCCTAATTATTCATTTGCAACTTATAATAAGCAACGTTTGATGCGTCTTGCTAAGCTTTATCCTCATGATTTTTCTGCATCAGAGTTGTTGTTGTTAGAATGTCAGTTAGAGACTTATATCGATGATATGCGATCTAACAACAAGTTCCAACAATTGCAAGGGATTGTTGATCTTGCAAAGAAATTAGTTGAGACAAGAAAGCATAAGACATATCCGTATGTTTATTTGCTGATCACTTTGGCTCTAGTACTTCCTGTTGCAACAGCCTCTGTTGAAAGAGCTTTCTCTGCCATGAATATTATAAAGAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

608

Amino Acids

69.31

Weight (kDa)

7.25

Isoelectric Point (pI)

44.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 61 - 240 1.6e-65 Domain of unknown function (DUF4371)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19260 AT1G41920 AT1G42710 AT2G06541 AT2G06541 AT3G29450 AT3G29763 AT3G29765 AT3G31402 AT3G31402 AT4G09660
fragaria_vesca FvH4_1g22711 FvH4_3g10612 FvH4_3g23261 FvH4_3g31623 FvH4_3g33391 FvH4_3g37321 FvH4_3g43192 FvH4_3g43193 FvH4_4g00181 FvH4_4g00251 FvH4_4g08751 FvH4_4g15271 FvH4_5g27190 FvH4_6g02122 FvH4_6g26880 FvH4_6g35121 FvH4_7g16871 FvH4_7g19080 FvH4_7g30071
malus_domestica MD02G1162100.v1.1 MD03G1081700.v1.1 MD09G1280500.v1.1 MD12G1083800.v1.1 MD12G1128200.v1.1
prunus_persica Prupe.7G129800_v2.0.a1
pyrus_communis pycom01g08000 pycom02g13840 pycom02g18030 pycom04g01290 pycom04g12580 pycom05g02550 pycom05g06740 pycom05g26200 pycom07g09850 pycom08g10610 pycom10g11280 pycom11g12580 pycom11g22260 pycom12g18440 pycom13g20080 pycom15g25600 pycom16g23600 pycom17g10070
rosa_chinensis RchiOBHm_Chr1g0313551 RchiOBHm_Chr1g0364331 RchiOBHm_Chr1g0369741 RchiOBHm_Chr1g0380371 RchiOBHm_Chr2g0097391 RchiOBHm_Chr2g0113561 RchiOBHm_Chr2g0114151 RchiOBHm_Chr2g0119761 RchiOBHm_Chr2g0149851 RchiOBHm_Chr2g0151931 RchiOBHm_Chr2g0166411 RchiOBHm_Chr3g0453661 RchiOBHm_Chr3g0466101 RchiOBHm_Chr3g0477911 RchiOBHm_Chr3g0486441 RchiOBHm_Chr4g0390161 RchiOBHm_Chr4g0392191 RchiOBHm_Chr4g0414461 RchiOBHm_Chr4g0421421 RchiOBHm_Chr5g0023801 RchiOBHm_Chr5g0040121 RchiOBHm_Chr5g0045381 RchiOBHm_Chr5g0061511 RchiOBHm_Chr5g0062621 RchiOBHm_Chr5g0064161 RchiOBHm_Chr5g0068711 RchiOBHm_Chr6g0246041 RchiOBHm_Chr6g0252511 RchiOBHm_Chr6g0252521 RchiOBHm_Chr6g0263361 RchiOBHm_Chr6g0269451 RchiOBHm_Chr6g0275351 RchiOBHm_Chr6g0288481 RchiOBHm_Chr6g0310011 RchiOBHm_Chr6g0310021 RchiOBHm_Chr7g0223071 RchiOBHm_Chr7g0227621 RchiOBHm_Chr7g0242581
rosa_laevigata RLG00000033957
rosa_multiflora Rmu_co8455865.1_g000001 Rmu_sc0000021.1_g000011 Rmu_sc0000079.1_g000049 Rmu_sc0000087.1_g000015 Rmu_sc0000151.1_g000008 Rmu_sc0000365.1_g000014 Rmu_sc0000446.1_g000054 Rmu_sc0000446.1_g000055 Rmu_sc0000534.1_g000006 Rmu_sc0000724.1_g000020 Rmu_sc0000859.1_g000001 Rmu_sc0000876.1_g000002 Rmu_sc0000881.1_g000005 Rmu_sc0000929.1_g000014 Rmu_sc0001112.1_g000004 Rmu_sc0001136.1_g000009 Rmu_sc0001353.1_g000064 Rmu_sc0001662.1_g000005 Rmu_sc0001764.1_g000006 Rmu_sc0001982.1_g000015 Rmu_sc0002052.1_g000008 Rmu_sc0002052.1_g000009 Rmu_sc0002158.1_g000011 Rmu_sc0002285.1_g000005 Rmu_sc0002983.1_g000025 Rmu_sc0003063.1_g000006 Rmu_sc0003076.1_g000005 Rmu_sc0003221.1_g000053 Rmu_sc0003382.1_g000010 Rmu_sc0003733.1_g000054 Rmu_sc0003997.1_g000005 Rmu_sc0004283.1_g000008 Rmu_sc0004283.1_g000053 Rmu_sc0004509.1_g000007 Rmu_sc0004540.1_g000028 Rmu_sc0004657.1_g000005 Rmu_sc0004935.1_g000006 Rmu_sc0005072.1_g000003 Rmu_sc0005248.1_g000001 Rmu_sc0006161.1_g000001 Rmu_sc0006209.1_g000005 Rmu_sc0006576.1_g000018 Rmu_sc0006576.1_g000019 Rmu_sc0007121.1_g000016 Rmu_sc0007121.1_g000032 Rmu_sc0007753.1_g000016 Rmu_sc0007795.1_g000009 Rmu_sc0007841.1_g000019 Rmu_sc0008339.1_g000021 Rmu_sc0008339.1_g000022 Rmu_sc0008432.1_g000001 Rmu_sc0008633.1_g000009 Rmu_sc0009104.1_g000013 Rmu_sc0011469.1_g000001 Rmu_sc0012039.1_g000001 Rmu_sc0013947.1_g000007 Rmu_sc0015560.1_g000001 Rmu_sc0017369.1_g000001 Rmu_sc0021648.1_g000001 Rmu_sc0022867.1_g000003 Rmu_sc0027801.1_g000001 Rmu_sc0027801.1_g000002 Rmu_sc0029861.1_g000001 Rmu_sc0030314.1_g000001 Rmu_sc0040149.1_g000001 Rmu_ssc0000089.1_g000028 Rmu_ssc0000480.1_g000033
rosa_roxburghii Rroxscaffold_1G00002540 Rroxscaffold_1G00013960 Rroxscaffold_1G00041160 Rroxscaffold_1G00045580 Rroxscaffold_3G00247310 Rroxscaffold_3G00267070 Rroxscaffold_4G00313830 Rroxscaffold_5G00372270 Rroxscaffold_6G00404800 Rroxscaffold_6G00406090
rosa_rugosa Rorug03G0269800 Rorug04G0142900 Rorug04G0152600 Rorug05G0223300.1 Rorug05G0266400 Rorug06G0008900 Rorug07G0086000 Rorug07G0205800 Rorug07G0270900
rosa_wichuraiana Rw0G001600 Rw0G017220 Rw0G017620 Rw0G018380 Rw1G002320 Rw1G020940 Rw1G021200 Rw1G022610 Rw1G038680 Rw2G013320 Rw2G016850 Rw2G024020 Rw2G025210 Rw2G032270 Rw2G039490 Rw2G041630 Rw2G048450 Rw2G051510 Rw3G025320 Rw4G003260 Rw4G007300 Rw4G009290 Rw4G010910 Rw4G013260 Rw5G008190 Rw5G008290 Rw5G018740 Rw5G023640 Rw5G028800 Rw5G031830 Rw5G041280 Rw5G044050 Rw6G007060 Rw6G008230 Rw6G009960 Rw6G013460 Rw6G014610 Rw6G017780 Rw6G033200 Rw7G021340 Rw7G023750 Rw7G032290 Rw7G032450 Rw7G033880 Rw7G038580 Rw7G040180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1539, 1817
Acc36I ACCTGC 1 cut(s) 1285
AccII CGCG 1 cut(s) 1006
AclI AACGTT 1 cut(s) 1549
AclWI GGATC 2 cut(s) 104, 165
AcsI RAATTY 2 cut(s) 129, 1135
AcuI CTGAAG 4 cut(s) 195, 287, 743, 1433
AfaI GTAC 3 cut(s) 598, 1027, 1764
AfiI CCNNNNNNNGG 3 cut(s) 153, 1450, 1501
AflII CTTAAG 1 cut(s) 614
AflIII ACRYGT 2 cut(s) 586, 1004
AjnI CCWGG 2 cut(s) 112, 1360
Alw21I GWGCWC 2 cut(s) 1016, 1384
Alw26I GTCTC 3 cut(s) 885, 1619, 1700
AlwI GGATC 2 cut(s) 104, 165
AlwNI CAGNNNCTG 1 cut(s) 1784
Ama87I CYCGRG 1 cut(s) 748
AoxI GGCC 2 cut(s) 244, 690
ApeKI GCWGC 2 cut(s) 419, 422
ApoI RAATTY 2 cut(s) 129, 1135
ArsI GACNNNNNNTTYG 2 cut(s) 718, 750
AspA2I CCTAGG 1 cut(s) 392
AspS9I GGNCC 1 cut(s) 690
AsuHPI GGTGA 1 cut(s) 33
AvaI CYCGRG 1 cut(s) 748
AvrII CCTAGG 1 cut(s) 392
BanII GRGCYC 2 cut(s) 1016, 1384
BbsI GAAGAC 1 cut(s) 731
Bbv12I GWGCWC 2 cut(s) 1016, 1384
BbvI GCAGC 2 cut(s) 406, 409
BccI CCATC 2 cut(s) 680, 1269
BcgI CGANNNNNNTGC 2 cut(s) 1391, 1425
BciT130I CCWGG 2 cut(s) 114, 1362
BclI TGATCA 4 cut(s) 325, 1105, 1345, 1746
BcoDI GTCTC 3 cut(s) 885, 1619, 1700
BfaI CTAG 8 cut(s) 203, 393, 482, 495, 663, 902, 1457, 1760
BfmI CTRYAG 1 cut(s) 624
BfrI CTTAAG 1 cut(s) 614
BfuAI ACCTGC 1 cut(s) 1285
BisI GCNGC 2 cut(s) 420, 423
BlnI CCTAGG 1 cut(s) 392
BlpI GCTNAGC 1 cut(s) 1566
BlsI GCNGC 2 cut(s) 421, 424
BmcAI AGTACT 2 cut(s) 598, 1764
Bme1390I CCNGG 2 cut(s) 114, 1362
BmeT110I CYCGRG 1 cut(s) 748
BmgT120I GGNCC 1 cut(s) 690
BmiI GGNNCC 1 cut(s) 691
BmrFI CCNGG 2 cut(s) 114, 1362
BmsI GCATC 7 cut(s) 454, 619, 851, 884, 1514, 1545, 1601
BpiI GAAGAC 1 cut(s) 731
BpmI CTGGAG 1 cut(s) 135
Bpu1102I GCTNAGC 1 cut(s) 1566
BpuEI CTTGAG 1 cut(s) 265
Bsa29I ATCGAT 1 cut(s) 1635
BsaAI YACGTR 1 cut(s) 671
BsaBI GATNNNNATC 2 cut(s) 141, 385
BsaJI CCNNGG 1 cut(s) 392
Bsc4I CCNNNNNNNGG 3 cut(s) 153, 1450, 1501
Bse1I ACTGG 1 cut(s) 693
Bse8I GATNNNNATC 2 cut(s) 141, 385
BseBI CCWGG 2 cut(s) 114, 1362
BseCI ATCGAT 1 cut(s) 1635
BseDI CCNNGG 1 cut(s) 392
BseGI GGATG 5 cut(s) 142, 505, 1081, 1280, 1348
BseJI GATNNNNATC 2 cut(s) 141, 385
BseLI CCNNNNNNNGG 3 cut(s) 153, 1450, 1501
BseNI ACTGG 1 cut(s) 693
BseXI GCAGC 2 cut(s) 406, 409
BsgI GTGCAG 1 cut(s) 1449
Bsh1236I CGCG 1 cut(s) 1006
BshFI GGCC 2 cut(s) 246, 692
BshVI ATCGAT 1 cut(s) 1635
BsiHKAI GWGCWC 2 cut(s) 1016, 1384
BsiHKCI CYCGRG 1 cut(s) 748
BslI CCNNNNNNNGG 3 cut(s) 153, 1450, 1501
BsmAI GTCTC 3 cut(s) 885, 1619, 1700
BsmI GAATGC 3 cut(s) 222, 367, 1222
BsnI GGCC 2 cut(s) 246, 692
BsoBI CYCGRG 1 cut(s) 748
Bsp1286I GDGCHC 2 cut(s) 1016, 1384
Bsp143I GATC 9 cut(s) 62, 109, 157, 325, 1105, 1345, 1646, 1684, 1746
Bsp1720I GCTNAGC 1 cut(s) 1566
BspANI GGCC 2 cut(s) 246, 692
BspDI ATCGAT 1 cut(s) 1635
BspFNI CGCG 1 cut(s) 1006
BspHI TCATGA 3 cut(s) 262, 1171, 1579
BspLI GGNNCC 1 cut(s) 691
BspMI ACCTGC 1 cut(s) 1285
BspPI GGATC 2 cut(s) 104, 165
BspTI CTTAAG 1 cut(s) 614
BsrI ACTGG 1 cut(s) 693
BssECI CCNNGG 1 cut(s) 392
BssMI GATC 9 cut(s) 62, 109, 157, 325, 1105, 1345, 1646, 1684, 1746
BssT1I CCWWGG 1 cut(s) 392
Bst2UI CCWGG 2 cut(s) 114, 1362
Bst4CI ACNGT 2 cut(s) 1045, 1466
Bst6I CTCTTC 2 cut(s) 163, 1035
BstAFI CTTAAG 1 cut(s) 614
BstBAI YACGTR 1 cut(s) 671
BstC8I GCNNGC 1 cut(s) 912
BstDEI CTNAG 5 cut(s) 182, 236, 377, 1511, 1566
BstF5I GGATG 5 cut(s) 142, 505, 1081, 1280, 1348
BstFNI CGCG 1 cut(s) 1006
BstKTI GATC 9 cut(s) 65, 112, 160, 328, 1108, 1348, 1649, 1687, 1749
BstMAI GTCTC 3 cut(s) 885, 1619, 1700
BstMBI GATC 9 cut(s) 62, 109, 157, 325, 1105, 1345, 1646, 1684, 1746
BstMWI GCNNNNNNNGC 4 cut(s) 629, 839, 907, 1802
BstNI CCWGG 2 cut(s) 114, 1362
BstNSI RCATGY 1 cut(s) 590
BstSCI CCNGG 2 cut(s) 112, 1360
BstSFI CTRYAG 1 cut(s) 624
BstUI CGCG 1 cut(s) 1006
BstV1I GCAGC 2 cut(s) 406, 409
BstV2I GAAGAC 1 cut(s) 731
Bsu15I ATCGAT 1 cut(s) 1635
BsuRI GGCC 2 cut(s) 246, 692
BsuTUI ATCGAT 1 cut(s) 1635
BtsCI GGATG 5 cut(s) 142, 505, 1081, 1280, 1348
BtsIMutI CAGTG 1 cut(s) 808
BveI ACCTGC 1 cut(s) 1285
Cac8I GCNNGC 1 cut(s) 912
CaiI CAGNNNCTG 1 cut(s) 1784
CciI TCATGA 3 cut(s) 262, 1171, 1579
Cfr13I GGNCC 1 cut(s) 690
ClaI ATCGAT 1 cut(s) 1635
CseI GACGC 1 cut(s) 1547
Csp6I GTAC 3 cut(s) 597, 1026, 1763
CviQI GTAC 3 cut(s) 597, 1026, 1763
DdeI CTNAG 5 cut(s) 182, 236, 377, 1511, 1566
DpnI GATC 9 cut(s) 64, 111, 159, 327, 1107, 1347, 1648, 1686, 1748
DpnII GATC 9 cut(s) 62, 109, 157, 325, 1105, 1345, 1646, 1684, 1746
DraI TTTAAA 1 cut(s) 16
Eam1104I CTCTTC 2 cut(s) 163, 1035
EarI CTCTTC 2 cut(s) 163, 1035
Ecl136II GAGCTC 2 cut(s) 1014, 1382
Eco130I CCWWGG 1 cut(s) 392
Eco147I AGGCCT 1 cut(s) 246
Eco24I GRGCYC 2 cut(s) 1016, 1384
Eco53kI GAGCTC 2 cut(s) 1014, 1382
Eco57I CTGAAG 4 cut(s) 195, 287, 743, 1433
Eco88I CYCGRG 1 cut(s) 748
EcoICRI GAGCTC 2 cut(s) 1014, 1382
EcoRII CCWGG 2 cut(s) 112, 1360
EcoT14I CCWWGG 1 cut(s) 392
EcoT22I ATGCAT 1 cut(s) 1404
EcoT38I GRGCYC 2 cut(s) 1016, 1384
ErhI CCWWGG 1 cut(s) 392
FbaI TGATCA 4 cut(s) 325, 1105, 1345, 1746
Fnu4HI GCNGC 2 cut(s) 420, 423
FokI GGATG 5 cut(s) 129, 512, 1088, 1287, 1355
FriOI GRGCYC 2 cut(s) 1016, 1384
Fsp4HI GCNGC 2 cut(s) 420, 423
FspBI CTAG 8 cut(s) 203, 393, 482, 495, 663, 902, 1457, 1760
GluI GCNGC 2 cut(s) 420, 423
GsuI CTGGAG 1 cut(s) 135
HaeIII GGCC 2 cut(s) 246, 692
HgaI GACGC 1 cut(s) 1547
HincII GTYRAC 1 cut(s) 415
HindII GTYRAC 1 cut(s) 415
HindIII AAGCTT 4 cut(s) 207, 655, 1119, 1568
HinfI GANTC 8 cut(s) 9, 73, 269, 397, 491, 566, 966, 1164
HpaI GTTAAC 1 cut(s) 415
HphI GGTGA 1 cut(s) 33
Hpy166II GTNNAC 3 cut(s) 415, 862, 959
Hpy188I TCNGA 6 cut(s) 109, 136, 274, 723, 1110, 1597
Hpy188III TCNNGA 8 cut(s) 146, 263, 890, 974, 1172, 1385, 1451, 1580
Hpy8I GTNNAC 3 cut(s) 415, 862, 959
Hpy99I CGWCG 1 cut(s) 891
HpyAV CCTTC 4 cut(s) 114, 505, 580, 733
HpyCH4III ACNGT 2 cut(s) 1045, 1466
HpyCH4IV ACGT 3 cut(s) 670, 886, 1549
HpyF10VI GCNNNNNNNGC 4 cut(s) 629, 839, 907, 1802
HpyF3I CTNAG 5 cut(s) 182, 236, 377, 1511, 1566
HpySE526I ACGT 3 cut(s) 670, 886, 1549
Ksp22I TGATCA 4 cut(s) 325, 1105, 1345, 1746
KspAI GTTAAC 1 cut(s) 415
Kzo9I GATC 9 cut(s) 62, 109, 157, 325, 1105, 1345, 1646, 1684, 1746
LmnI GCTCC 5 cut(s) 370, 514, 1011, 1387, 1453
Lsp1109I GCAGC 2 cut(s) 406, 409
LweI GCATC 7 cut(s) 454, 619, 851, 884, 1514, 1545, 1601
MaeI CTAG 8 cut(s) 203, 393, 482, 495, 663, 902, 1457, 1760
MaeII ACGT 3 cut(s) 670, 886, 1549
MaeIII GTNAC 3 cut(s) 293, 526, 680
MalI GATC 9 cut(s) 64, 111, 159, 327, 1107, 1347, 1648, 1686, 1748
MboI GATC 9 cut(s) 62, 109, 157, 325, 1105, 1345, 1646, 1684, 1746
MboII GAAGA 9 cut(s) 92, 180, 224, 293, 370, 736, 870, 1022, 1047
MfeI CAATTG 2 cut(s) 846, 1667
MhlI GDGCHC 2 cut(s) 1016, 1384
MluI ACGCGT 1 cut(s) 1004
MlyI GAGTC 3 cut(s) 82, 278, 960
MmeI TCCRAC 5 cut(s) 922, 989, 1053, 1468, 1687
MnlI CCTC 5 cut(s) 56, 922, 1468, 1587, 1792
Mph1103I ATGCAT 1 cut(s) 1404
MseI TTAA 8 cut(s) 15, 414, 615, 653, 714, 918, 936, 987
MslI CAYNNNNRTG 1 cut(s) 333
MspCI CTTAAG 1 cut(s) 614
MspR9I CCNGG 2 cut(s) 114, 1362
MunI CAATTG 2 cut(s) 846, 1667
Mva1269I GAATGC 3 cut(s) 222, 367, 1222
MvaI CCWGG 2 cut(s) 114, 1362
MvnI CGCG 1 cut(s) 1006
MwoI GCNNNNNNNGC 4 cut(s) 629, 839, 907, 1802
NdeII GATC 9 cut(s) 62, 109, 157, 325, 1105, 1345, 1646, 1684, 1746
NlaIV GGNNCC 1 cut(s) 691
NsiI ATGCAT 1 cut(s) 1404
NspI RCATGY 1 cut(s) 590
PaeR7I CTCGAG 1 cut(s) 748
PagI TCATGA 3 cut(s) 262, 1171, 1579
PceI AGGCCT 1 cut(s) 246
PciI ACATGT 1 cut(s) 586
PcsI WCGNNNNNNNCGW 1 cut(s) 1555
PctI GAATGC 3 cut(s) 222, 367, 1222
PfeI GAWTC 5 cut(s) 9, 397, 491, 566, 1164
PfoI TCCNGGA 2 cut(s) 112, 1360
PkrI GCNGC 2 cut(s) 421, 424
PleI GAGTC 3 cut(s) 81, 277, 960
PpsI GAGTC 3 cut(s) 81, 277, 960
Ppu21I YACGTR 1 cut(s) 671
PscI ACATGT 1 cut(s) 586
PsiI TTATAA 2 cut(s) 1539, 1817
Psp124BI GAGCTC 2 cut(s) 1016, 1384
Psp1406I AACGTT 1 cut(s) 1549
Psp6I CCWGG 2 cut(s) 112, 1360
PspGI CCWGG 2 cut(s) 112, 1360
PspN4I GGNNCC 1 cut(s) 691
PspPI GGNCC 1 cut(s) 690
PspXI VCTCGAGB 1 cut(s) 748
PstNI CAGNNNCTG 1 cut(s) 1784
RsaI GTAC 3 cut(s) 598, 1027, 1764
RsaNI GTAC 3 cut(s) 597, 1026, 1763
RseI CAYNNNNRTG 1 cut(s) 333
SacI GAGCTC 2 cut(s) 1016, 1384
SaqAI TTAA 8 cut(s) 15, 414, 615, 653, 714, 918, 936, 987
SatI GCNGC 2 cut(s) 420, 423
Sau3AI GATC 9 cut(s) 62, 109, 157, 325, 1105, 1345, 1646, 1684, 1746
Sau96I GGNCC 1 cut(s) 690
ScaI AGTACT 2 cut(s) 598, 1764
SchI GAGTC 3 cut(s) 82, 278, 960
ScrFI CCNGG 2 cut(s) 114, 1362
SduI GDGCHC 2 cut(s) 1016, 1384
SfaNI GCATC 7 cut(s) 454, 619, 851, 884, 1514, 1545, 1601
SfcI CTRYAG 1 cut(s) 624
Sfr274I CTCGAG 1 cut(s) 748
SlaI CTCGAG 1 cut(s) 748
SmiMI CAYNNNNRTG 1 cut(s) 333
SmlI CTYRAG 3 cut(s) 280, 614, 748
SmoI CTYRAG 3 cut(s) 280, 614, 748
SseBI AGGCCT 1 cut(s) 246
SspI AATATT 2 cut(s) 1324, 1813
SspMI CTAG 8 cut(s) 203, 393, 482, 495, 663, 902, 1457, 1760
SstI GAGCTC 2 cut(s) 1016, 1384
StuI AGGCCT 1 cut(s) 246
StyD4I CCNGG 2 cut(s) 112, 1360
StyI CCWWGG 1 cut(s) 392
TaaI ACNGT 2 cut(s) 1045, 1466
TaiI ACGT 3 cut(s) 673, 889, 1552
TaqI TCGA 5 cut(s) 193, 199, 749, 889, 1635
TatI WGTACW 2 cut(s) 596, 1762
TfiI GAWTC 5 cut(s) 9, 397, 491, 566, 1164
Tru1I TTAA 8 cut(s) 15, 414, 615, 653, 714, 918, 936, 987
Tru9I TTAA 8 cut(s) 15, 414, 615, 653, 714, 918, 936, 987
TscAI CASTG 1 cut(s) 808
TseI GCWGC 2 cut(s) 419, 422
TspGWI ACGGA 1 cut(s) 1719
TspRI CASTG 1 cut(s) 808
Vha464I CTTAAG 1 cut(s) 614
XapI RAATTY 2 cut(s) 129, 1135
XceI RCATGY 1 cut(s) 590
XhoI CTCGAG 1 cut(s) 748
XmaJI CCTAGG 1 cut(s) 392
XspI CTAG 8 cut(s) 203, 393, 482, 495, 663, 902, 1457, 1760
ZrmI AGTACT 2 cut(s) 598, 1764
Zsp2I ATGCAT 1 cut(s) 1404
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.