MD12G1128200.v1.1

Zinc finger MYM-type protein 1-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
Physical Location & Seq
Forward (+)
20342214 .. 20345307
3094 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1128200.v1.1.491

Sequence Viewer

Length: 2304 bp
ATGGATTTCTGTAACAGTAATGATGTTGCCTGTGTTGGATTATTTGTAGATGAGGGCAAGGTCAGGAAAGTGTTGAAGGTGGAGCCTCTCCCAGACGAATCTGGCCATTTCTTTAACCTGAAAATTAGAAGTATGGAACGATATTACAAGCGAAAATCATCATCGATTAGTTCGGACAATCATATTCCAAATAGTTCATCTCCAAACTTGGATAGTTCCATTCCTATTCCGAACAGTTCCCCTCCAATTCCATGTAGTTCTAATCCAATTGGGGGTAATTCCACTCCACAACAAAATGAGTTAAAAGTTGATTTGGATAATCTTGAGAGAGACCCCGGAAAGAGAATTCCAATGAAGGATTATCCTCCAGATATTCGAGATGAGGTCCGAAGAGCATATATATTAATGGAGCCTTTTAGAGCTAAAGATCATGATTTTCCATTCACTTTCACAATAAAGCTGTTGAAGCTGCTGTCAGAAGAAGCTCGTATGGCTTATCGCACTTGCTTGAATGCGTCAATTGATTGCACTAAGTTTTTGTTGCGACAAGGTCTTTCATTTCGTGGTCACGATGAAAGTGACACTTCAAACAATAGAGGTAATTATTTGGAGCTCTTGCAATTCCTTGCGGATCATGATGAGAAAATAAAGGCCGTTGTGTTAGATAAAGCTCCAGGAAATCTCAAGCTAATAGCTCATTCAATTCAAAAAGATCTTGTTCATTCATGTTCTATTGAAACCATTAAAACTATCATAAGTGATATGAAGAATGCTAGGTTCTTTTCTCTATTGGTTGATGAGGCACGTGATGTTTCTATAAAGGAGCAAATGGCGGTGGTTTTGCGTTATGTGGACAAAACTGGGAAAGTCATTGAAAGGTTTGTAGGAGTTCAACATGTTCCCGACACCACATCAAACACATTAAAGGAGTCTATTGATGCCTTCTTTCATTTCAATGAGTTGAGCTTCTCCAATTTACGAGGGCAAGGTTACGATGGTGCTAGTAATATGAAAGGTGAGTTCAATGGACTCAAGACAAAGATTTTGAATGATCAACCTTGTGCATTCTATGTTCATTGCTTTGCTCATCAACTCCAATTAGCTCTTGTTGCCGTAGCAAAGAATAATGTTGATGTTAACACATTCTTTCTATTGGCTAATAATGTGGTAAATAATATTGGAGCTTCATGTAAGCGTCGTGATGCACTTAGAGAGATGCAACAAAAAGAACTTATGAAAGCTCTTGAAAATGATTCTCTTATGACGGGACGAGGCTTAAATCAAGAAACTAGTCTCAAACGTGCCGGAGCTACAAGATGGAATTCACATTATGGTACTTTGATTAGTTTGATTACTATGTTCTCATCCGTGGTCAATGTGCTTGAAATGATTGTTGATGATAATATCAATGATAGTGTGGCCGAAGCAAATAGGTTATTGAAAGACATACATTCTTTTGAGTTTGTGTTTCTCTTATTTTTGATGAAATCTATATTGGGAATCACGAATGATTTATCACAAGCATTACAAATGGATGATCAAGAGATTGTGAATGCAATGGCTTTAGTCAACACATGTAAAGAACAACTATTCTACATGAGGAATGATGAGGGGTTTGACCTTTTGGTTGACAAAGTATTGTCATTTTGTGTTCAACATCATATTGAGGTTATTAACATGGATGAGACATATGTAGCTCATGGGAGGTCGCGTCGTAATACCCACAAAAAGACCAACCATCATCGTTACAAAGTGGAGCTCTTTTTTGTTGTCATTGATTCCCAACTTACAGAGTTAAATGATCGCTTCAATGAAACAAGTACCGAATTGCTCATTTGTTTGGCTAGTTTGAGTCCAAATAATTCTTTTGCAGCTTTTGACAAAGAAAAGCTACTTCGCCTTGCTCAATTGTACCCTCAAGATTTTACGAAGCAAGACCTATTGGCACTTGAAGATCAACTCGATATTTATATTCATTCTATGCGTTCAAGAAGTGACTTTTCTCAGTTGCAAAGCATTAGTGATCTTGCTAAGAAAATGGTGGAAAAAAGGTTGCATCGAGTATTTCAATATGTGTATTTACTTATTGAATTGGCTTTAGTTTTATCTGTTGCAACTGCTTCAGTGGAGAGAGCATTTTCTGCCATGAATATCATCAAGAGTCCACTCCGCAACAGAATGGGGGATCAATGGTTAAATGATAGCTTAGTTGTTTATATTGAGAAAGATGTTTTTTCTTGTATTGACAATGAAACTATCATGACACGTTTTCAAAGTATGAGATCCCGTCGTGGACAAATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

768

Amino Acids

87.51

Weight (kDa)

6.34

Isoelectric Point (pI)

40.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 163 - 343 5.4e-62 Domain of unknown function (DUF4371)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19260 AT1G41920 AT1G42710 AT2G06541 AT2G06541 AT3G29450 AT3G29763 AT3G29765 AT3G31402 AT3G31402 AT4G09660
fragaria_vesca FvH4_1g22711 FvH4_3g10612 FvH4_3g23261 FvH4_3g31623 FvH4_3g33391 FvH4_3g37321 FvH4_3g43192 FvH4_3g43193 FvH4_4g00181 FvH4_4g00251 FvH4_4g08751 FvH4_4g15271 FvH4_5g27190 FvH4_6g02122 FvH4_6g26880 FvH4_6g35121 FvH4_7g16871 FvH4_7g19080 FvH4_7g30071
malus_domestica MD02G1162100.v1.1 MD03G1081700.v1.1 MD09G1280500.v1.1 MD12G1083800.v1.1 MD12G1128200.v1.1
prunus_persica Prupe.7G129800_v2.0.a1
pyrus_communis pycom01g08000 pycom02g13840 pycom02g18030 pycom04g01290 pycom04g12580 pycom05g02550 pycom05g06740 pycom05g26200 pycom07g09850 pycom08g10610 pycom10g11280 pycom11g12580 pycom11g22260 pycom12g18440 pycom13g20080 pycom15g25600 pycom16g23600 pycom17g10070
rosa_chinensis RchiOBHm_Chr1g0313551 RchiOBHm_Chr1g0364331 RchiOBHm_Chr1g0369741 RchiOBHm_Chr1g0380371 RchiOBHm_Chr2g0097391 RchiOBHm_Chr2g0113561 RchiOBHm_Chr2g0114151 RchiOBHm_Chr2g0119761 RchiOBHm_Chr2g0149851 RchiOBHm_Chr2g0151931 RchiOBHm_Chr2g0166411 RchiOBHm_Chr3g0453661 RchiOBHm_Chr3g0466101 RchiOBHm_Chr3g0477911 RchiOBHm_Chr3g0486441 RchiOBHm_Chr4g0390161 RchiOBHm_Chr4g0392191 RchiOBHm_Chr4g0414461 RchiOBHm_Chr4g0421421 RchiOBHm_Chr5g0023801 RchiOBHm_Chr5g0040121 RchiOBHm_Chr5g0045381 RchiOBHm_Chr5g0061511 RchiOBHm_Chr5g0062621 RchiOBHm_Chr5g0064161 RchiOBHm_Chr5g0068711 RchiOBHm_Chr6g0246041 RchiOBHm_Chr6g0252511 RchiOBHm_Chr6g0252521 RchiOBHm_Chr6g0263361 RchiOBHm_Chr6g0269451 RchiOBHm_Chr6g0275351 RchiOBHm_Chr6g0288481 RchiOBHm_Chr6g0310011 RchiOBHm_Chr6g0310021 RchiOBHm_Chr7g0223071 RchiOBHm_Chr7g0227621 RchiOBHm_Chr7g0242581
rosa_laevigata RLG00000033957
rosa_multiflora Rmu_co8455865.1_g000001 Rmu_sc0000021.1_g000011 Rmu_sc0000079.1_g000049 Rmu_sc0000087.1_g000015 Rmu_sc0000151.1_g000008 Rmu_sc0000365.1_g000014 Rmu_sc0000446.1_g000054 Rmu_sc0000446.1_g000055 Rmu_sc0000534.1_g000006 Rmu_sc0000724.1_g000020 Rmu_sc0000859.1_g000001 Rmu_sc0000876.1_g000002 Rmu_sc0000881.1_g000005 Rmu_sc0000929.1_g000014 Rmu_sc0001112.1_g000004 Rmu_sc0001136.1_g000009 Rmu_sc0001353.1_g000064 Rmu_sc0001662.1_g000005 Rmu_sc0001764.1_g000006 Rmu_sc0001982.1_g000015 Rmu_sc0002052.1_g000008 Rmu_sc0002052.1_g000009 Rmu_sc0002158.1_g000011 Rmu_sc0002285.1_g000005 Rmu_sc0002983.1_g000025 Rmu_sc0003063.1_g000006 Rmu_sc0003076.1_g000005 Rmu_sc0003221.1_g000053 Rmu_sc0003382.1_g000010 Rmu_sc0003733.1_g000054 Rmu_sc0003997.1_g000005 Rmu_sc0004283.1_g000008 Rmu_sc0004283.1_g000053 Rmu_sc0004509.1_g000007 Rmu_sc0004540.1_g000028 Rmu_sc0004657.1_g000005 Rmu_sc0004935.1_g000006 Rmu_sc0005072.1_g000003 Rmu_sc0005248.1_g000001 Rmu_sc0006161.1_g000001 Rmu_sc0006209.1_g000005 Rmu_sc0006576.1_g000018 Rmu_sc0006576.1_g000019 Rmu_sc0007121.1_g000016 Rmu_sc0007121.1_g000032 Rmu_sc0007753.1_g000016 Rmu_sc0007795.1_g000009 Rmu_sc0007841.1_g000019 Rmu_sc0008339.1_g000021 Rmu_sc0008339.1_g000022 Rmu_sc0008432.1_g000001 Rmu_sc0008633.1_g000009 Rmu_sc0009104.1_g000013 Rmu_sc0011469.1_g000001 Rmu_sc0012039.1_g000001 Rmu_sc0013947.1_g000007 Rmu_sc0015560.1_g000001 Rmu_sc0017369.1_g000001 Rmu_sc0021648.1_g000001 Rmu_sc0022867.1_g000003 Rmu_sc0027801.1_g000001 Rmu_sc0027801.1_g000002 Rmu_sc0029861.1_g000001 Rmu_sc0030314.1_g000001 Rmu_sc0040149.1_g000001 Rmu_ssc0000089.1_g000028 Rmu_ssc0000480.1_g000033
rosa_roxburghii Rroxscaffold_1G00002540 Rroxscaffold_1G00013960 Rroxscaffold_1G00041160 Rroxscaffold_1G00045580 Rroxscaffold_3G00247310 Rroxscaffold_3G00267070 Rroxscaffold_4G00313830 Rroxscaffold_5G00372270 Rroxscaffold_6G00404800 Rroxscaffold_6G00406090
rosa_rugosa Rorug03G0269800 Rorug04G0142900 Rorug04G0152600 Rorug05G0223300.1 Rorug05G0266400 Rorug06G0008900 Rorug07G0086000 Rorug07G0205800 Rorug07G0270900
rosa_wichuraiana Rw0G001600 Rw0G017220 Rw0G017620 Rw0G018380 Rw1G002320 Rw1G020940 Rw1G021200 Rw1G022610 Rw1G038680 Rw2G013320 Rw2G016850 Rw2G024020 Rw2G025210 Rw2G032270 Rw2G039490 Rw2G041630 Rw2G048450 Rw2G051510 Rw3G025320 Rw4G003260 Rw4G007300 Rw4G009290 Rw4G010910 Rw4G013260 Rw5G008190 Rw5G008290 Rw5G018740 Rw5G023640 Rw5G028800 Rw5G031830 Rw5G041280 Rw5G044050 Rw6G007060 Rw6G008230 Rw6G009960 Rw6G013460 Rw6G014610 Rw6G017780 Rw6G033200 Rw7G021340 Rw7G023750 Rw7G032290 Rw7G032450 Rw7G033880 Rw7G038580 Rw7G040180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 1711
AciI CCGC 3 cut(s) 629, 833, 2170
AclWI GGATC 3 cut(s) 639, 2193, 2277
AcoI YGGCCR 2 cut(s) 103, 1419
AcsI RAATTY 3 cut(s) 345, 1321, 2298
AcuI CTGAAG 1 cut(s) 2106
AcvI CACGTG 1 cut(s) 806
AfaI GTAC 3 cut(s) 1336, 1822, 1913
AfiI CCNNNNNNNGG 1 cut(s) 272
AflIII ACRYGT 3 cut(s) 895, 1574, 2264
AhlI ACTAGT 1 cut(s) 1289
AjnI CCWGG 1 cut(s) 673
AjuI GAANNNNNNNTTGG 2 cut(s) 1478, 1510
Alw21I GWGCWC 2 cut(s) 615, 1761
Alw26I GTCTC 3 cut(s) 324, 1298, 1679
AlwI GGATC 3 cut(s) 639, 2193, 2277
AoxI GGCC 3 cut(s) 103, 651, 1419
ApeKI GCWGC 2 cut(s) 469, 1871
ApoI RAATTY 3 cut(s) 345, 1321, 2298
ArsI GACNNNNNNTTYG 2 cut(s) 1027, 1059
AseI ATTAAT 1 cut(s) 404
AspS9I GGNCC 1 cut(s) 385
AsuC2I CCSGG 1 cut(s) 336
AsuHPI GGTGA 1 cut(s) 1028
AvaII GGWCC 1 cut(s) 385
BalI TGGCCA 1 cut(s) 105
BanII GRGCYC 2 cut(s) 615, 1761
BbrPI CACGTG 1 cut(s) 806
Bbv12I GWGCWC 2 cut(s) 615, 1761
BbvI GCAGC 2 cut(s) 456, 1883
BccI CCATC 3 cut(s) 989, 1311, 1746
BceAI ACGGC 2 cut(s) 638, 1097
BciT130I CCWGG 1 cut(s) 675
BclI TGATCA 2 cut(s) 1051, 1537
BcnI CCSGG 1 cut(s) 336
BcoDI GTCTC 3 cut(s) 324, 1298, 1679
BcuI ACTAGT 1 cut(s) 1289
BfaI CTAG 4 cut(s) 774, 1002, 1290, 1845
BglII AGATCT 1 cut(s) 712
BisI GCNGC 2 cut(s) 470, 1872
BlsI GCNGC 2 cut(s) 471, 1873
Bme1390I CCNGG 2 cut(s) 336, 675
Bme18I GGWCC 1 cut(s) 385
BmgT120I GGNCC 1 cut(s) 385
BmiI GGNNCC 2 cut(s) 84, 411
BmrFI CCNGG 2 cut(s) 336, 675
BmrI ACTGGG 1 cut(s) 870
BmsI GCATC 4 cut(s) 928, 1192, 1206, 2065
BmuI ACTGGG 1 cut(s) 870
BpmI CTGGAG 2 cut(s) 351, 657
BpuEI CTTGAG 4 cut(s) 344, 668, 1016, 1902
BpuMI CCSGG 1 cut(s) 336
Bsa29I ATCGAT 1 cut(s) 164
BsaAI YACGTR 1 cut(s) 806
BsaI GGTCTC 1 cut(s) 324
BsaJI CCNNGG 2 cut(s) 334, 1368
BsaXI ACNNNNNCTCC 2 cut(s) 1696, 1726
Bsc4I CCNNNNNNNGG 1 cut(s) 272
Bse1I ACTGG 1 cut(s) 865
Bse3DI GCAATG 2 cut(s) 1075, 1563
BseBI CCWGG 1 cut(s) 675
BseCI ATCGAT 1 cut(s) 164
BseDI CCNNGG 2 cut(s) 334, 1368
BseGI GGATG 3 cut(s) 1364, 1540, 1687
BseLI CCNNNNNNNGG 1 cut(s) 272
BseMI GCAATG 2 cut(s) 1075, 1563
BseMII CTCAG 1 cut(s) 2018
BseNI ACTGG 1 cut(s) 865
BseXI GCAGC 2 cut(s) 456, 1883
Bsh1236I CGCG 1 cut(s) 1711
BshFI GGCC 3 cut(s) 105, 653, 1421
BshVI ATCGAT 1 cut(s) 164
BsiHKAI GWGCWC 2 cut(s) 615, 1761
BsiSI CCGG 2 cut(s) 336, 1305
BslFI GGGAC 1 cut(s) 1281
BslI CCNNNNNNNGG 1 cut(s) 272
BsmAI GTCTC 3 cut(s) 324, 1298, 1679
BsmFI GGGAC 1 cut(s) 1281
BsmI GAATGC 4 cut(s) 517, 775, 1064, 1558
BsnI GGCC 3 cut(s) 105, 653, 1421
Bso31I GGTCTC 1 cut(s) 324
Bsp1286I GDGCHC 2 cut(s) 615, 1761
BspACI CCGC 3 cut(s) 629, 833, 2170
BspANI GGCC 3 cut(s) 105, 653, 1421
BspCNI CTCAG 1 cut(s) 2017
BspDI ATCGAT 1 cut(s) 164
BspFNI CGCG 1 cut(s) 1711
BspHI TCATGA 3 cut(s) 430, 634, 2259
BspLI GGNNCC 2 cut(s) 84, 411
BspPI GGATC 3 cut(s) 639, 2193, 2277
BspQI GCTCTTC 1 cut(s) 385
BspTNI GGTCTC 1 cut(s) 324
BsrDI GCAATG 2 cut(s) 1075, 1563
BsrI ACTGG 1 cut(s) 865
BssECI CCNNGG 2 cut(s) 334, 1368
Bst2UI CCWGG 1 cut(s) 675
Bst4CI ACNGT 2 cut(s) 17, 236
Bst6I CTCTTC 1 cut(s) 385
BstAPI GCANNNNNTGC 1 cut(s) 2141
BstBAI YACGTR 1 cut(s) 806
BstDEI CTNAG 5 cut(s) 531, 1208, 2004, 2031, 2206
BstDSI CCRYGG 1 cut(s) 1368
BstF5I GGATG 3 cut(s) 1364, 1540, 1687
BstFNI CGCG 1 cut(s) 1711
BstMAI GTCTC 3 cut(s) 324, 1298, 1679
BstMWI GCNNNNNNNGC 4 cut(s) 466, 491, 1109, 2141
BstNI CCWGG 1 cut(s) 675
BstNSI RCATGY 2 cut(s) 899, 1578
BstSCI CCNGG 2 cut(s) 334, 673
BstUI CGCG 1 cut(s) 1711
BstV1I GCAGC 2 cut(s) 456, 1883
BstX2I RGATCY 2 cut(s) 712, 2282
BstYI RGATCY 2 cut(s) 712, 2282
Bsu15I ATCGAT 1 cut(s) 164
BsuRI GGCC 3 cut(s) 105, 653, 1421
BsuTUI ATCGAT 1 cut(s) 164
BtgI CCRYGG 1 cut(s) 1368
BtsCI GGATG 3 cut(s) 1364, 1540, 1687
BtsIMutI CAGTG 1 cut(s) 2130
CciI TCATGA 3 cut(s) 430, 634, 2259
Cfr13I GGNCC 1 cut(s) 385
ClaI ATCGAT 1 cut(s) 164
CseI GACGC 3 cut(s) 504, 1184, 1700
Csp6I GTAC 3 cut(s) 1335, 1821, 1912
CviQI GTAC 3 cut(s) 1335, 1821, 1912
DdeI CTNAG 5 cut(s) 531, 1208, 2004, 2031, 2206
EaeI YGGCCR 2 cut(s) 103, 1419
Eam1104I CTCTTC 1 cut(s) 385
EarI CTCTTC 1 cut(s) 385
Ecl136II GAGCTC 2 cut(s) 613, 1759
Eco24I GRGCYC 2 cut(s) 615, 1761
Eco31I GGTCTC 1 cut(s) 324
Eco47I GGWCC 1 cut(s) 385
Eco53kI GAGCTC 2 cut(s) 613, 1759
Eco57I CTGAAG 1 cut(s) 2106
Eco72I CACGTG 1 cut(s) 806
EcoICRI GAGCTC 2 cut(s) 613, 1759
EcoRI GAATTC 2 cut(s) 345, 1321
EcoRII CCWGG 1 cut(s) 673
EcoT38I GRGCYC 2 cut(s) 615, 1761
FalI AAGNNNNNCTT 2 cut(s) 568, 600
FaqI GGGAC 1 cut(s) 1281
FauNDI CATATG 1 cut(s) 1690
FbaI TGATCA 2 cut(s) 1051, 1537
Fnu4HI GCNGC 2 cut(s) 470, 1872
FokI GGATG 3 cut(s) 1351, 1547, 1694
FriOI GRGCYC 2 cut(s) 615, 1761
Fsp4HI GCNGC 2 cut(s) 470, 1872
FspBI CTAG 4 cut(s) 774, 1002, 1290, 1845
GluI GCNGC 2 cut(s) 470, 1872
GsuI CTGGAG 2 cut(s) 351, 657
HaeIII GGCC 3 cut(s) 105, 653, 1421
HapII CCGG 2 cut(s) 336, 1305
HgaI GACGC 3 cut(s) 504, 1184, 1700
HincII GTYRAC 3 cut(s) 1138, 1570, 1630
HindII GTYRAC 3 cut(s) 1138, 1570, 1630
HinfI GANTC 8 cut(s) 98, 929, 1029, 1253, 1500, 1778, 1852, 2161
HpaI GTTAAC 1 cut(s) 1138
HpaII CCGG 2 cut(s) 336, 1305
HphI GGTGA 1 cut(s) 1028
Hpy166II GTNNAC 6 cut(s) 853, 1138, 1570, 1630, 2165, 2294
Hpy188I TCNGA 4 cut(s) 175, 231, 389, 478
Hpy8I GTNNAC 6 cut(s) 853, 1138, 1570, 1630, 2165, 2294
Hpy99I CGWCG 3 cut(s) 1200, 1716, 2292
HpyAV CCTTC 3 cut(s) 70, 349, 952
HpyCH4III ACNGT 2 cut(s) 17, 236
HpyCH4IV ACGT 3 cut(s) 805, 1300, 2266
HpyF10VI GCNNNNNNNGC 4 cut(s) 466, 491, 1109, 2141
HpyF3I CTNAG 5 cut(s) 531, 1208, 2004, 2031, 2206
HpySE526I ACGT 3 cut(s) 805, 1300, 2266
Ksp22I TGATCA 2 cut(s) 1051, 1537
KspAI GTTAAC 1 cut(s) 1138
LguI GCTCTTC 1 cut(s) 385
LmnI GCTCC 8 cut(s) 82, 409, 610, 676, 823, 1181, 1307, 1756
Lsp1109I GCAGC 2 cut(s) 456, 1883
LweI GCATC 4 cut(s) 928, 1192, 1206, 2065
MaeI CTAG 4 cut(s) 774, 1002, 1290, 1845
MaeII ACGT 3 cut(s) 805, 1300, 2266
MaeIII GTNAC 6 cut(s) 11, 566, 578, 989, 1745, 1994
MboII GAAGA 4 cut(s) 402, 491, 778, 1964
MfeI CAATTG 3 cut(s) 267, 519, 1907
MflI RGATCY 2 cut(s) 712, 2282
MhlI GDGCHC 2 cut(s) 615, 1761
MlsI TGGCCA 1 cut(s) 105
MluNI TGGCCA 1 cut(s) 105
MlyI GAGTC 4 cut(s) 938, 1023, 1861, 2170
MmeI TCCRAC 1 cut(s) 16
Mox20I TGGCCA 1 cut(s) 105
MscI TGGCCA 1 cut(s) 105
MslI CAYNNNNRTG 1 cut(s) 954
Msp20I TGGCCA 1 cut(s) 105
MspI CCGG 2 cut(s) 336, 1305
MspR9I CCNGG 2 cut(s) 336, 675
MunI CAATTG 3 cut(s) 267, 519, 1907
Mva1269I GAATGC 4 cut(s) 517, 775, 1064, 1558
MvaI CCWGG 1 cut(s) 675
MvnI CGCG 1 cut(s) 1711
MwoI GCNNNNNNNGC 4 cut(s) 466, 491, 1109, 2141
NciI CCSGG 1 cut(s) 336
NdeI CATATG 1 cut(s) 1690
NlaIV GGNNCC 2 cut(s) 84, 411
NmuCI GTSAC 3 cut(s) 566, 578, 1994
NspI RCATGY 2 cut(s) 899, 1578
PagI TCATGA 3 cut(s) 430, 634, 2259
PciI ACATGT 2 cut(s) 895, 1574
PciSI GCTCTTC 1 cut(s) 385
PctI GAATGC 4 cut(s) 517, 775, 1064, 1558
PfeI GAWTC 4 cut(s) 98, 1253, 1500, 1778
PflFI GACNNNGTC 1 cut(s) 549
PfoI TCCNGGA 1 cut(s) 673
PkrI GCNGC 2 cut(s) 471, 1873
PleI GAGTC 4 cut(s) 937, 1023, 1860, 2169
PmaCI CACGTG 1 cut(s) 806
PmlI CACGTG 1 cut(s) 806
PpsI GAGTC 4 cut(s) 937, 1023, 1860, 2169
Ppu21I YACGTR 1 cut(s) 806
PscI ACATGT 2 cut(s) 895, 1574
PshBI ATTAAT 1 cut(s) 404
Psp124BI GAGCTC 2 cut(s) 615, 1761
Psp6I CCWGG 1 cut(s) 673
PspCI CACGTG 1 cut(s) 806
PspGI CCWGG 1 cut(s) 673
PspN4I GGNNCC 2 cut(s) 84, 411
PspPI GGNCC 1 cut(s) 385
PsuI RGATCY 2 cut(s) 712, 2282
PsyI GACNNNGTC 1 cut(s) 549
RsaI GTAC 3 cut(s) 1336, 1822, 1913
RsaNI GTAC 3 cut(s) 1335, 1821, 1912
RseI CAYNNNNRTG 1 cut(s) 954
SacI GAGCTC 2 cut(s) 615, 1761
SapI GCTCTTC 1 cut(s) 385
SatI GCNGC 2 cut(s) 470, 1872
Sau96I GGNCC 1 cut(s) 385
SchI GAGTC 4 cut(s) 938, 1023, 1861, 2170
ScrFI CCNGG 2 cut(s) 336, 675
SduI GDGCHC 2 cut(s) 615, 1761
SfaNI GCATC 4 cut(s) 928, 1192, 1206, 2065
SinI GGWCC 1 cut(s) 385
SmiMI CAYNNNNRTG 1 cut(s) 954
SmlI CTYRAG 4 cut(s) 323, 683, 1031, 1917
SmoI CTYRAG 4 cut(s) 323, 683, 1031, 1917
SpeI ACTAGT 1 cut(s) 1289
SsiI CCGC 3 cut(s) 629, 833, 2170
SspI AATATT 1 cut(s) 1177
SspMI CTAG 4 cut(s) 774, 1002, 1290, 1845
SstI GAGCTC 2 cut(s) 615, 1761
StyD4I CCNGG 2 cut(s) 334, 673
TaaI ACNGT 2 cut(s) 17, 236
TaiI ACGT 3 cut(s) 808, 1303, 2269
TaqI TCGA 4 cut(s) 164, 376, 1962, 2059
TfiI GAWTC 4 cut(s) 98, 1253, 1500, 1778
TscAI CASTG 1 cut(s) 2130
TseFI GTSAC 3 cut(s) 566, 578, 1994
TseI GCWGC 2 cut(s) 469, 1871
Tsp45I GTSAC 3 cut(s) 566, 578, 1994
TspGWI ACGGA 1 cut(s) 1357
TspRI CASTG 1 cut(s) 2130
Tth111I GACNNNGTC 1 cut(s) 549
VpaK11BI GGWCC 1 cut(s) 385
VspI ATTAAT 1 cut(s) 404
XapI RAATTY 3 cut(s) 345, 1321, 2298
XceI RCATGY 2 cut(s) 899, 1578
XspI CTAG 4 cut(s) 774, 1002, 1290, 1845
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.