Rw1G020940

Zinc finger MYM-type protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000122
Physical Location & Seq
Reverse (-)
44707442 .. 44709337
1896 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G020940.1

Sequence Viewer

Length: 1518 bp
ATGCAAAAATGGGATTTATTAAGAAATCCTACCAAAAAAATTGAAACAATTTTTCAGTCAAAATCTAGTAAGGATATAGAGGACAATCGATTGAGGCTTAAGGCTTCAATAGAAAGTGTAAGATTGCTAGCTAATCAAGGAGTTGCTTTTAGAGGCCATGATGAAACTGAAAACTCATTGAATGCGGGATATTTTAGAGAAGTCATAAAATCTTTTTCAAGAATGAGTATTGAGGTTGAGAGAGTTGTTTTGGGAAATGCTCCCGGAATTGCCAAGTACATTAGTTCATTAATTCAAAAGGAACTTCTAAATATTCTTGGTAATAAAGTGAGGAACAAGATATGTGAAGAAGTTGGAGATTCCAAATATTGTATTCTTGTTAATGAAGCAGTAGATGTATCTAGTAAGGAACAAATGGCCATTATTTTGAGGTTTGTTGATTGTCAAGGTATTATTCGAGAACGATTTTTTAAGATTGTGAGTGTTCCTAACACTATCTCACAAACTCTTAAAGATGAGATTTCTAAAGTACTTACTATGTACAATCTTCAAGTGAGAAATATGCGTGGTCAAGGATATGATGGTGCTAGCAATATGAGAGGTATTTATAATGGGTTACAAGCATTGTTTCTTGAAGAGTGTCCTTATGCTTATTATGTGCATTGTTTTGCTCACCGCTTGCAATTGTCATTGAATGCTACAGCTAAAGGGGTGCCGGAGATTTGGCAATTTTTTTCAAGTTTAAGTTTAATTGTGAATTTTGTTGATTCTTCTGCTAAGCGTCATTCTGCATTAAAAGCTGTGAGAAAGGAAGAAATTGCAGAGTTGGTAGCTTGTGGCCAACTTCAAACAGCTGCTGCTACACGTTGGAGCTCACATTTTCGTTCAATTAAGAGTTTGATTGAATTGTTTAGTTCAACCAAAAAAACTCTTAATTATATGATTGAGCAAGGACCCAAGGAATTGCAAGGAGAAGTTGTGGCTGTTCTTAAAGCTATGATGTCTTTTGATTTTGTGTTCTGCTTGCTTCTAATGCACAAATTGATGAAAATTACTGAAGTTCTTTGTCAGACATTGCAGCGAAAATCTCTTGACTTCGTACATGCTATGAAGTTTGTTGGACATACAAAATCATTTCTTCAAGAGATGAGAGAAGAAGGCTGGGATGACTTGGTAAGAAATGTTGAAACTTTTTGTGAGAAACATGATATTGATATGCCTGATATGAATGCTCGTTATAAGGATGGTACAGGTCGTCGTTGCCAACAAAGAGATTTCATTACAGTTGAGCATCATTACCATATAGATGTCTTCAATGCTTTAGTTGATTTTCAGTTGAGTGAGTTGAATAGAAGATTCTCAGACCAAACATCTGAACTTCTTATACTTAGTTCAACCTTGGATCCTAGTGATAACTTCAGTAATTTTAAAACTGAAGAATATGCTGAATCTATTGACAATGAATCGGTGATCAAAGAGTTTGAAGCTTGTGGAACTCGTAGAGTTAGATTTAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

505

Amino Acids

57.99

Weight (kDa)

7.56

Isoelectric Point (pI)

49.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 14 - 205 2.5e-45 Domain of unknown function (DUF4371)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19260 AT1G41920 AT1G42710 AT2G06541 AT2G06541 AT3G29450 AT3G29763 AT3G29765 AT3G31402 AT3G31402 AT4G09660
fragaria_vesca FvH4_1g22711 FvH4_3g10612 FvH4_3g23261 FvH4_3g31623 FvH4_3g33391 FvH4_3g37321 FvH4_3g43192 FvH4_3g43193 FvH4_4g00181 FvH4_4g00251 FvH4_4g08751 FvH4_4g15271 FvH4_5g27190 FvH4_6g02122 FvH4_6g26880 FvH4_6g35121 FvH4_7g16871 FvH4_7g19080 FvH4_7g30071
malus_domestica MD02G1162100.v1.1 MD03G1081700.v1.1 MD09G1280500.v1.1 MD12G1083800.v1.1 MD12G1128200.v1.1
prunus_persica Prupe.7G129800_v2.0.a1
pyrus_communis pycom01g08000 pycom02g13840 pycom02g18030 pycom04g01290 pycom04g12580 pycom05g02550 pycom05g06740 pycom05g26200 pycom07g09850 pycom08g10610 pycom10g11280 pycom11g12580 pycom11g22260 pycom12g18440 pycom13g20080 pycom15g25600 pycom16g23600 pycom17g10070
rosa_chinensis RchiOBHm_Chr1g0313551 RchiOBHm_Chr1g0364331 RchiOBHm_Chr1g0369741 RchiOBHm_Chr1g0380371 RchiOBHm_Chr2g0097391 RchiOBHm_Chr2g0113561 RchiOBHm_Chr2g0114151 RchiOBHm_Chr2g0119761 RchiOBHm_Chr2g0149851 RchiOBHm_Chr2g0151931 RchiOBHm_Chr2g0166411 RchiOBHm_Chr3g0453661 RchiOBHm_Chr3g0466101 RchiOBHm_Chr3g0477911 RchiOBHm_Chr3g0486441 RchiOBHm_Chr4g0390161 RchiOBHm_Chr4g0392191 RchiOBHm_Chr4g0414461 RchiOBHm_Chr4g0421421 RchiOBHm_Chr5g0023801 RchiOBHm_Chr5g0040121 RchiOBHm_Chr5g0045381 RchiOBHm_Chr5g0061511 RchiOBHm_Chr5g0062621 RchiOBHm_Chr5g0064161 RchiOBHm_Chr5g0068711 RchiOBHm_Chr6g0246041 RchiOBHm_Chr6g0252511 RchiOBHm_Chr6g0252521 RchiOBHm_Chr6g0263361 RchiOBHm_Chr6g0269451 RchiOBHm_Chr6g0275351 RchiOBHm_Chr6g0288481 RchiOBHm_Chr6g0310011 RchiOBHm_Chr6g0310021 RchiOBHm_Chr7g0223071 RchiOBHm_Chr7g0227621 RchiOBHm_Chr7g0242581
rosa_laevigata RLG00000033957
rosa_multiflora Rmu_co8455865.1_g000001 Rmu_sc0000021.1_g000011 Rmu_sc0000079.1_g000049 Rmu_sc0000087.1_g000015 Rmu_sc0000151.1_g000008 Rmu_sc0000365.1_g000014 Rmu_sc0000446.1_g000054 Rmu_sc0000446.1_g000055 Rmu_sc0000534.1_g000006 Rmu_sc0000724.1_g000020 Rmu_sc0000859.1_g000001 Rmu_sc0000876.1_g000002 Rmu_sc0000881.1_g000005 Rmu_sc0000929.1_g000014 Rmu_sc0001112.1_g000004 Rmu_sc0001136.1_g000009 Rmu_sc0001353.1_g000064 Rmu_sc0001662.1_g000005 Rmu_sc0001764.1_g000006 Rmu_sc0001982.1_g000015 Rmu_sc0002052.1_g000008 Rmu_sc0002052.1_g000009 Rmu_sc0002158.1_g000011 Rmu_sc0002285.1_g000005 Rmu_sc0002983.1_g000025 Rmu_sc0003063.1_g000006 Rmu_sc0003076.1_g000005 Rmu_sc0003221.1_g000053 Rmu_sc0003382.1_g000010 Rmu_sc0003733.1_g000054 Rmu_sc0003997.1_g000005 Rmu_sc0004283.1_g000008 Rmu_sc0004283.1_g000053 Rmu_sc0004509.1_g000007 Rmu_sc0004540.1_g000028 Rmu_sc0004657.1_g000005 Rmu_sc0004935.1_g000006 Rmu_sc0005072.1_g000003 Rmu_sc0005248.1_g000001 Rmu_sc0006161.1_g000001 Rmu_sc0006209.1_g000005 Rmu_sc0006576.1_g000018 Rmu_sc0006576.1_g000019 Rmu_sc0007121.1_g000016 Rmu_sc0007121.1_g000032 Rmu_sc0007753.1_g000016 Rmu_sc0007795.1_g000009 Rmu_sc0007841.1_g000019 Rmu_sc0008339.1_g000021 Rmu_sc0008339.1_g000022 Rmu_sc0008432.1_g000001 Rmu_sc0008633.1_g000009 Rmu_sc0009104.1_g000013 Rmu_sc0011469.1_g000001 Rmu_sc0012039.1_g000001 Rmu_sc0013947.1_g000007 Rmu_sc0015560.1_g000001 Rmu_sc0017369.1_g000001 Rmu_sc0021648.1_g000001 Rmu_sc0022867.1_g000003 Rmu_sc0027801.1_g000001 Rmu_sc0027801.1_g000002 Rmu_sc0029861.1_g000001 Rmu_sc0030314.1_g000001 Rmu_sc0040149.1_g000001 Rmu_ssc0000089.1_g000028 Rmu_ssc0000480.1_g000033
rosa_roxburghii Rroxscaffold_1G00002540 Rroxscaffold_1G00013960 Rroxscaffold_1G00041160 Rroxscaffold_1G00045580 Rroxscaffold_3G00247310 Rroxscaffold_3G00267070 Rroxscaffold_4G00313830 Rroxscaffold_5G00372270 Rroxscaffold_6G00404800 Rroxscaffold_6G00406090
rosa_rugosa Rorug03G0269800 Rorug04G0142900 Rorug04G0152600 Rorug05G0223300.1 Rorug05G0266400 Rorug06G0008900 Rorug07G0086000 Rorug07G0205800 Rorug07G0270900
rosa_wichuraiana Rw0G001600 Rw0G017220 Rw0G017620 Rw0G018380 Rw1G002320 Rw1G020940 Rw1G021200 Rw1G022610 Rw1G038680 Rw2G013320 Rw2G016850 Rw2G024020 Rw2G025210 Rw2G032270 Rw2G039490 Rw2G041630 Rw2G048450 Rw2G051510 Rw3G025320 Rw4G003260 Rw4G007300 Rw4G009290 Rw4G010910 Rw4G013260 Rw5G008190 Rw5G008290 Rw5G018740 Rw5G023640 Rw5G028800 Rw5G031830 Rw5G041280 Rw5G044050 Rw6G007060 Rw6G008230 Rw6G009960 Rw6G013460 Rw6G014610 Rw6G017780 Rw6G033200 Rw7G021340 Rw7G023750 Rw7G032290 Rw7G032450 Rw7G033880 Rw7G038580 Rw7G040180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 609, 1239
AccB1I GGYRCC 1 cut(s) 712
AciI CCGC 2 cut(s) 185, 676
AclWI GGATC 2 cut(s) 1397, 1410
AcoI YGGCCR 2 cut(s) 417, 838
AcsI RAATTY 1 cut(s) 757
AcuI CTGAAG 3 cut(s) 1077, 1402, 1455
AfaI GTAC 5 cut(s) 278, 531, 542, 1101, 1249
AflII CTTAAG 1 cut(s) 98
AflIII ACRYGT 1 cut(s) 863
AluBI AGCT 8 cut(s) 131, 704, 800, 833, 854, 873, 995, 1487
AluI AGCT 8 cut(s) 131, 704, 800, 833, 854, 873, 995, 1487
Alw21I GWGCWC 1 cut(s) 875
AlwI GGATC 2 cut(s) 1397, 1410
AlwNI CAGNNNCTG 1 cut(s) 857
AoxI GGCC 3 cut(s) 154, 417, 838
ApeKI GCWGC 3 cut(s) 854, 857, 1078
ApoI RAATTY 1 cut(s) 757
AseI ATTAAT 1 cut(s) 290
AspS9I GGNCC 1 cut(s) 953
AsuC2I CCSGG 1 cut(s) 264
AsuHPI GGTGA 2 cut(s) 665, 1480
AsuNHI GCTAGC 2 cut(s) 127, 587
AvaII GGWCC 1 cut(s) 953
BalI TGGCCA 2 cut(s) 419, 840
BamHI GGATCC 1 cut(s) 1402
BanI GGYRCC 1 cut(s) 712
BanII GRGCYC 1 cut(s) 875
BbsI GAAGAC 1 cut(s) 1303
Bbv12I GWGCWC 1 cut(s) 875
BbvI GCAGC 3 cut(s) 841, 844, 1090
BccI CCATC 2 cut(s) 575, 1238
BclI TGATCA 1 cut(s) 1470
BcnI CCSGG 1 cut(s) 264
BfaI CTAG 5 cut(s) 66, 128, 402, 588, 1407
BfmI CTRYAG 1 cut(s) 699
BfrI CTTAAG 1 cut(s) 98
BisI GCNGC 3 cut(s) 855, 858, 1079
BlpI GCTNAGC 1 cut(s) 777
BlsI GCNGC 3 cut(s) 856, 859, 1080
BmcAI AGTACT 1 cut(s) 531
Bme1390I CCNGG 1 cut(s) 264
Bme18I GGWCC 1 cut(s) 953
BmgT120I GGNCC 1 cut(s) 953
BmiI GGNNCC 3 cut(s) 714, 955, 1404
BmrFI CCNGG 1 cut(s) 264
BmsI GCATC 1 cut(s) 1300
BmtI GCTAGC 2 cut(s) 131, 591
BpiI GAAGAC 1 cut(s) 1303
Bpu1102I GCTNAGC 1 cut(s) 777
BpuMI CCSGG 1 cut(s) 264
Bsa29I ATCGAT 1 cut(s) 88
BsaJI CCNNGG 2 cut(s) 957, 1398
BsaXI ACNNNNNCTCC 2 cut(s) 963, 993
Bse3DI GCAATG 1 cut(s) 1073
BseCI ATCGAT 1 cut(s) 88
BseDI CCNNGG 2 cut(s) 957, 1398
BseGI GGATG 2 cut(s) 1171, 1249
BseMI GCAATG 1 cut(s) 1073
BseMII CTCAG 1 cut(s) 1374
BseXI GCAGC 3 cut(s) 841, 844, 1090
BseYI CCCAGC 1 cut(s) 1161
BshFI GGCC 3 cut(s) 156, 419, 840
BshNI GGYRCC 1 cut(s) 712
BshVI ATCGAT 1 cut(s) 88
BsiHKAI GWGCWC 1 cut(s) 875
BsiSI CCGG 2 cut(s) 264, 716
BsmI GAATGC 3 cut(s) 187, 700, 1234
BsnI GGCC 3 cut(s) 156, 419, 840
Bsp1286I GDGCHC 1 cut(s) 875
Bsp1407I TGTACA 1 cut(s) 540
Bsp143I GATC 2 cut(s) 1402, 1470
Bsp1720I GCTNAGC 1 cut(s) 777
BspACI CCGC 2 cut(s) 185, 676
BspANI GGCC 3 cut(s) 156, 419, 840
BspCNI CTCAG 1 cut(s) 1373
BspDI ATCGAT 1 cut(s) 88
BspLI GGNNCC 3 cut(s) 714, 955, 1404
BspOI GCTAGC 2 cut(s) 131, 591
BspPI GGATC 2 cut(s) 1397, 1410
BspT107I GGYRCC 1 cut(s) 712
BspTI CTTAAG 1 cut(s) 98
BsrDI GCAATG 1 cut(s) 1073
BsrGI TGTACA 1 cut(s) 540
BssECI CCNNGG 2 cut(s) 957, 1398
BssMI GATC 2 cut(s) 1402, 1470
BssT1I CCWWGG 2 cut(s) 957, 1398
Bst4CI ACNGT 1 cut(s) 1285
Bst6I CTCTTC 1 cut(s) 630
BstAFI CTTAAG 1 cut(s) 98
BstAUI TGTACA 1 cut(s) 540
BstC8I GCNNGC 4 cut(s) 129, 589, 680, 1025
BstDEI CTNAG 3 cut(s) 777, 1360, 1388
BstF5I GGATG 2 cut(s) 1171, 1249
BstKTI GATC 2 cut(s) 1405, 1473
BstMBI GATC 2 cut(s) 1402, 1470
BstMWI GCNNNNNNNGC 2 cut(s) 797, 1033
BstNSI RCATGY 1 cut(s) 1106
BstSCI CCNGG 1 cut(s) 262
BstSFI CTRYAG 1 cut(s) 699
BstV1I GCAGC 3 cut(s) 841, 844, 1090
BstV2I GAAGAC 1 cut(s) 1303
BstX2I RGATCY 1 cut(s) 1402
BstYI RGATCY 1 cut(s) 1402
Bsu15I ATCGAT 1 cut(s) 88
BsuRI GGCC 3 cut(s) 156, 419, 840
BsuTUI ATCGAT 1 cut(s) 88
BtsCI GGATG 2 cut(s) 1171, 1249
Cac8I GCNNGC 4 cut(s) 129, 589, 680, 1025
CaiI CAGNNNCTG 1 cut(s) 857
Cfr13I GGNCC 1 cut(s) 953
ClaI ATCGAT 1 cut(s) 88
CseI GACGC 1 cut(s) 770
Csp6I GTAC 5 cut(s) 277, 530, 541, 1100, 1248
CviAII CATG 3 cut(s) 158, 1103, 1205
CviQI GTAC 5 cut(s) 277, 530, 541, 1100, 1248
DdeI CTNAG 3 cut(s) 777, 1360, 1388
DpnI GATC 2 cut(s) 1404, 1472
DpnII GATC 2 cut(s) 1402, 1470
DraI TTTAAA 1 cut(s) 1429
EaeI YGGCCR 2 cut(s) 417, 838
Eam1104I CTCTTC 1 cut(s) 630
EarI CTCTTC 1 cut(s) 630
Ecl136II GAGCTC 1 cut(s) 873
Eco130I CCWWGG 2 cut(s) 957, 1398
Eco24I GRGCYC 1 cut(s) 875
Eco47I GGWCC 1 cut(s) 953
Eco53kI GAGCTC 1 cut(s) 873
Eco57I CTGAAG 3 cut(s) 1077, 1402, 1455
EcoICRI GAGCTC 1 cut(s) 873
EcoO109I RGGNCCY 1 cut(s) 953
EcoT14I CCWWGG 2 cut(s) 957, 1398
EcoT38I GRGCYC 1 cut(s) 875
ErhI CCWWGG 2 cut(s) 957, 1398
FaeI CATG 3 cut(s) 161, 1106, 1208
FatI CATG 3 cut(s) 157, 1102, 1204
FauI CCCGC 1 cut(s) 178
FbaI TGATCA 1 cut(s) 1470
Fnu4HI GCNGC 3 cut(s) 855, 858, 1079
FokI GGATG 2 cut(s) 1178, 1256
FriOI GRGCYC 1 cut(s) 875
Fsp4HI GCNGC 3 cut(s) 855, 858, 1079
FspBI CTAG 5 cut(s) 66, 128, 402, 588, 1407
GluI GCNGC 3 cut(s) 855, 858, 1079
GsaI CCCAGC 1 cut(s) 1165
HaeIII GGCC 3 cut(s) 156, 419, 840
HapII CCGG 2 cut(s) 264, 716
HgaI GACGC 1 cut(s) 770
Hin1II CATG 3 cut(s) 161, 1106, 1208
HindIII AAGCTT 1 cut(s) 1485
HinfI GANTC 5 cut(s) 359, 767, 1356, 1448, 1463
HpaII CCGG 2 cut(s) 264, 716
HphI GGTGA 2 cut(s) 665, 1480
Hpy188I TCNGA 3 cut(s) 1071, 1363, 1375
Hpy188III TCNNGA 5 cut(s) 219, 458, 632, 1091, 1142
Hpy99I CGWCG 1 cut(s) 1260
HpyAV CCTTC 1 cut(s) 1151
HpyCH4III ACNGT 1 cut(s) 1285
HpyCH4IV ACGT 1 cut(s) 865
HpyCH4V TGCA 8 cut(s) 4, 661, 682, 791, 821, 967, 1036, 1078
HpyF10VI GCNNNNNNNGC 2 cut(s) 797, 1033
HpyF3I CTNAG 3 cut(s) 777, 1360, 1388
HpySE526I ACGT 1 cut(s) 865
Hsp92II CATG 3 cut(s) 161, 1106, 1208
Ksp22I TGATCA 1 cut(s) 1470
Kzo9I GATC 2 cut(s) 1402, 1470
LmnI GCTCC 2 cut(s) 265, 870
LpnPI CCDG 5 cut(s) 277, 729, 1147, 1233, 1236
Lsp1109I GCAGC 3 cut(s) 841, 844, 1090
LweI GCATC 1 cut(s) 1300
MaeI CTAG 5 cut(s) 66, 128, 402, 588, 1407
MaeII ACGT 1 cut(s) 865
MaeIII GTNAC 1 cut(s) 615
MalI GATC 2 cut(s) 1404, 1472
MboI GATC 2 cut(s) 1402, 1470
MfeI CAATTG 1 cut(s) 683
MflI RGATCY 1 cut(s) 1402
MhlI GDGCHC 1 cut(s) 875
MlsI TGGCCA 2 cut(s) 419, 840
MluNI TGGCCA 2 cut(s) 419, 840
MmeI TCCRAC 3 cut(s) 334, 848, 1099
MnlI CCTC 7 cut(s) 73, 87, 146, 226, 324, 423, 593
Mox20I TGGCCA 2 cut(s) 419, 840
MscI TGGCCA 2 cut(s) 419, 840
MslI CAYNNNNRTG 1 cut(s) 1305
Msp20I TGGCCA 2 cut(s) 419, 840
MspA1I CMGCKG 1 cut(s) 854
MspCI CTTAAG 1 cut(s) 98
MspI CCGG 2 cut(s) 264, 716
MspR9I CCNGG 1 cut(s) 264
MunI CAATTG 1 cut(s) 683
Mva1269I GAATGC 3 cut(s) 187, 700, 1234
MwoI GCNNNNNNNGC 2 cut(s) 797, 1033
NciI CCSGG 1 cut(s) 264
NdeII GATC 2 cut(s) 1402, 1470
NheI GCTAGC 2 cut(s) 127, 587
NlaIII CATG 3 cut(s) 161, 1106, 1208
NlaIV GGNNCC 3 cut(s) 714, 955, 1404
NspI RCATGY 1 cut(s) 1106
PctI GAATGC 3 cut(s) 187, 700, 1234
PfeI GAWTC 5 cut(s) 359, 767, 1356, 1448, 1463
PfoI TCCNGGA 1 cut(s) 262
PkrI GCNGC 3 cut(s) 856, 859, 1080
PpuMI RGGWCCY 1 cut(s) 953
PshBI ATTAAT 1 cut(s) 290
PsiI TTATAA 2 cut(s) 609, 1239
Psp124BI GAGCTC 1 cut(s) 875
Psp5II RGGWCCY 1 cut(s) 953
PspFI CCCAGC 1 cut(s) 1161
PspN4I GGNNCC 3 cut(s) 714, 955, 1404
PspPI GGNCC 1 cut(s) 953
PspPPI RGGWCCY 1 cut(s) 953
PsrI GAACNNNNNNTAC 2 cut(s) 1368, 1400
PstNI CAGNNNCTG 1 cut(s) 857
PsuI RGATCY 1 cut(s) 1402
PvuII CAGCTG 1 cut(s) 854
RsaI GTAC 5 cut(s) 278, 531, 542, 1101, 1249
RsaNI GTAC 5 cut(s) 277, 530, 541, 1100, 1248
RseI CAYNNNNRTG 1 cut(s) 1305
SacI GAGCTC 1 cut(s) 875
SatI GCNGC 3 cut(s) 855, 858, 1079
Sau3AI GATC 2 cut(s) 1402, 1470
Sau96I GGNCC 1 cut(s) 953
ScaI AGTACT 1 cut(s) 531
ScrFI CCNGG 1 cut(s) 264
SduI GDGCHC 1 cut(s) 875
SfaNI GCATC 1 cut(s) 1300
SfcI CTRYAG 1 cut(s) 699
SinI GGWCC 1 cut(s) 953
SmiMI CAYNNNNRTG 1 cut(s) 1305
SmlI CTYRAG 1 cut(s) 98
SmoI CTYRAG 1 cut(s) 98
SsiI CCGC 2 cut(s) 185, 676
SspI AATATT 2 cut(s) 313, 368
SspMI CTAG 5 cut(s) 66, 128, 402, 588, 1407
SstI GAGCTC 1 cut(s) 875
StyD4I CCNGG 1 cut(s) 262
StyI CCWWGG 2 cut(s) 957, 1398
TaaI ACNGT 1 cut(s) 1285
TaiI ACGT 1 cut(s) 868
TaqI TCGA 2 cut(s) 88, 457
TatI WGTACW 3 cut(s) 276, 529, 540
TfiI GAWTC 5 cut(s) 359, 767, 1356, 1448, 1463
TseI GCWGC 3 cut(s) 854, 857, 1078
TspDTI ATGAA 8 cut(s) 177, 276, 399, 1061, 1124, 1241, 1267, 1476
Vha464I CTTAAG 1 cut(s) 98
VpaK11BI GGWCC 1 cut(s) 953
VspI ATTAAT 1 cut(s) 290
XapI RAATTY 1 cut(s) 757
XceI RCATGY 1 cut(s) 1106
XspI CTAG 5 cut(s) 66, 128, 402, 588, 1407
ZrmI AGTACT 1 cut(s) 531
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.