Rmu_sc0002285.1_g000005

Zinc finger MYM-type protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002285.1
OG0000122
Physical Location & Seq
Forward (+)
29522 .. 33450
3929 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002285.1_g000005.1.cds

Sequence Viewer

Length: 1545 bp
atgacagatcacctgaaacccaagaggtacaaaaatcttttgtcatggtttacaagtggtactccatcaagtgatagtgtcgatgagattagaagtgggagtgggagtaggagtagaaatgtgactgagaattctgttaatgatgtccctttaaacccttctccatctattccactagaagagtgtcataatgaaataattgagagagaagaaagttttgatgttagttctctagaacgtgatccaggaatatggcgtccaatatgcaagtactctttgaatgagtgtgacaatattcgaagagcttatgtggtcttaggaccgtatctacctcacttaagtagttacccattatcatttgacgaaggtcaaggtcgaaaatttaatcctaagtggttcaaagaatggtcgtggcttgagtattccgcagagttggacaaagcattttgcttcccttgtttcttttttgatagttatccatcccatcatccagcatttactgagcatgggtttcaaggttggaaaaatgttatgtcaaaaaaatctggcattgtctctcacatgggagtcttaaattccccacataatattgccatgcacaagtgggagtcactaagaaacccatctaagcatattgaaagggtgattagcacacaatcatcacaagaagtagcagataaccgactccggcttattactactatagagagtgtaaggttgttggcacgccaaggatgtgcttttagaggccatgatgaatcggttaattcatctaatggtggcaatttcaatgcggatgtggattcctttggaagaatgaatatagatattcgcaaagtcttacaaaatgctcgtgggaatgccaagtatacttctcccattattctaaaacaaattttaaatatacttggtaacaaagttagaaccaagattcgggaggaagtgggagatgccaagttttgtatccttgttgatgaagctgttgatgtatctaatagggaacaaatggctatcattcttcgatttgttgattgtgatgggtttattagagaactgtttttcaaagtgcttagtgtggcaaacacttgttctcaaactctaaaagatgatatatccaaagttcttactcaatatgatcttcaagtagaaaatatgcatgggcaaggatatgatggtgctagcaatatgcggggtgaatttaatggtttacaagctttgttttgtgaagagttggcccggcccaagacccccaaccccccgcaaaggccaagcactgcagacaaccacacacgccgccggcaagccccatcgccaccaccacgccgccctgcagcaacaagccgccgcgccaaagccttccattgcagcacagccatgtcactccagagccagccccaacaccagacagcccacctcagaacgaatccagaccagatcggagccagaaccctttcgagatcaccactgccccgatccgaactgaatcgccacaaccacaacccgatcgatgacgccagagaccgccaccggaaagacgaagaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

514

Amino Acids

58.47

Weight (kDa)

8.67

Isoelectric Point (pI)

63.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19260 AT1G41920 AT1G42710 AT2G06541 AT2G06541 AT3G29450 AT3G29763 AT3G29765 AT3G31402 AT3G31402 AT4G09660
fragaria_vesca FvH4_1g22711 FvH4_3g10612 FvH4_3g23261 FvH4_3g31623 FvH4_3g33391 FvH4_3g37321 FvH4_3g43192 FvH4_3g43193 FvH4_4g00181 FvH4_4g00251 FvH4_4g08751 FvH4_4g15271 FvH4_5g27190 FvH4_6g02122 FvH4_6g26880 FvH4_6g35121 FvH4_7g16871 FvH4_7g19080 FvH4_7g30071
malus_domestica MD02G1162100.v1.1 MD03G1081700.v1.1 MD09G1280500.v1.1 MD12G1083800.v1.1 MD12G1128200.v1.1
prunus_persica Prupe.7G129800_v2.0.a1
pyrus_communis pycom01g08000 pycom02g13840 pycom02g18030 pycom04g01290 pycom04g12580 pycom05g02550 pycom05g06740 pycom05g26200 pycom07g09850 pycom08g10610 pycom10g11280 pycom11g12580 pycom11g22260 pycom12g18440 pycom13g20080 pycom15g25600 pycom16g23600 pycom17g10070
rosa_chinensis RchiOBHm_Chr1g0313551 RchiOBHm_Chr1g0364331 RchiOBHm_Chr1g0369741 RchiOBHm_Chr1g0380371 RchiOBHm_Chr2g0097391 RchiOBHm_Chr2g0113561 RchiOBHm_Chr2g0114151 RchiOBHm_Chr2g0119761 RchiOBHm_Chr2g0149851 RchiOBHm_Chr2g0151931 RchiOBHm_Chr2g0166411 RchiOBHm_Chr3g0453661 RchiOBHm_Chr3g0466101 RchiOBHm_Chr3g0477911 RchiOBHm_Chr3g0486441 RchiOBHm_Chr4g0390161 RchiOBHm_Chr4g0392191 RchiOBHm_Chr4g0414461 RchiOBHm_Chr4g0421421 RchiOBHm_Chr5g0023801 RchiOBHm_Chr5g0040121 RchiOBHm_Chr5g0045381 RchiOBHm_Chr5g0061511 RchiOBHm_Chr5g0062621 RchiOBHm_Chr5g0064161 RchiOBHm_Chr5g0068711 RchiOBHm_Chr6g0246041 RchiOBHm_Chr6g0252511 RchiOBHm_Chr6g0252521 RchiOBHm_Chr6g0263361 RchiOBHm_Chr6g0269451 RchiOBHm_Chr6g0275351 RchiOBHm_Chr6g0288481 RchiOBHm_Chr6g0310011 RchiOBHm_Chr6g0310021 RchiOBHm_Chr7g0223071 RchiOBHm_Chr7g0227621 RchiOBHm_Chr7g0242581
rosa_laevigata RLG00000033957
rosa_multiflora Rmu_co8455865.1_g000001 Rmu_sc0000021.1_g000011 Rmu_sc0000079.1_g000049 Rmu_sc0000087.1_g000015 Rmu_sc0000151.1_g000008 Rmu_sc0000365.1_g000014 Rmu_sc0000446.1_g000054 Rmu_sc0000446.1_g000055 Rmu_sc0000534.1_g000006 Rmu_sc0000724.1_g000020 Rmu_sc0000859.1_g000001 Rmu_sc0000876.1_g000002 Rmu_sc0000881.1_g000005 Rmu_sc0000929.1_g000014 Rmu_sc0001112.1_g000004 Rmu_sc0001136.1_g000009 Rmu_sc0001353.1_g000064 Rmu_sc0001662.1_g000005 Rmu_sc0001764.1_g000006 Rmu_sc0001982.1_g000015 Rmu_sc0002052.1_g000008 Rmu_sc0002052.1_g000009 Rmu_sc0002158.1_g000011 Rmu_sc0002285.1_g000005 Rmu_sc0002983.1_g000025 Rmu_sc0003063.1_g000006 Rmu_sc0003076.1_g000005 Rmu_sc0003221.1_g000053 Rmu_sc0003382.1_g000010 Rmu_sc0003733.1_g000054 Rmu_sc0003997.1_g000005 Rmu_sc0004283.1_g000008 Rmu_sc0004283.1_g000053 Rmu_sc0004509.1_g000007 Rmu_sc0004540.1_g000028 Rmu_sc0004657.1_g000005 Rmu_sc0004935.1_g000006 Rmu_sc0005072.1_g000003 Rmu_sc0005248.1_g000001 Rmu_sc0006161.1_g000001 Rmu_sc0006209.1_g000005 Rmu_sc0006576.1_g000018 Rmu_sc0006576.1_g000019 Rmu_sc0007121.1_g000016 Rmu_sc0007121.1_g000032 Rmu_sc0007753.1_g000016 Rmu_sc0007795.1_g000009 Rmu_sc0007841.1_g000019 Rmu_sc0008339.1_g000021 Rmu_sc0008339.1_g000022 Rmu_sc0008432.1_g000001 Rmu_sc0008633.1_g000009 Rmu_sc0009104.1_g000013 Rmu_sc0011469.1_g000001 Rmu_sc0012039.1_g000001 Rmu_sc0013947.1_g000007 Rmu_sc0015560.1_g000001 Rmu_sc0017369.1_g000001 Rmu_sc0021648.1_g000001 Rmu_sc0022867.1_g000003 Rmu_sc0027801.1_g000001 Rmu_sc0027801.1_g000002 Rmu_sc0029861.1_g000001 Rmu_sc0030314.1_g000001 Rmu_sc0040149.1_g000001 Rmu_ssc0000089.1_g000028 Rmu_ssc0000480.1_g000033
rosa_roxburghii Rroxscaffold_1G00002540 Rroxscaffold_1G00013960 Rroxscaffold_1G00041160 Rroxscaffold_1G00045580 Rroxscaffold_3G00247310 Rroxscaffold_3G00267070 Rroxscaffold_4G00313830 Rroxscaffold_5G00372270 Rroxscaffold_6G00404800 Rroxscaffold_6G00406090
rosa_rugosa Rorug03G0269800 Rorug04G0142900 Rorug04G0152600 Rorug05G0223300.1 Rorug05G0266400 Rorug06G0008900 Rorug07G0086000 Rorug07G0205800 Rorug07G0270900
rosa_wichuraiana Rw0G001600 Rw0G017220 Rw0G017620 Rw0G018380 Rw1G002320 Rw1G020940 Rw1G021200 Rw1G022610 Rw1G038680 Rw2G013320 Rw2G016850 Rw2G024020 Rw2G025210 Rw2G032270 Rw2G039490 Rw2G041630 Rw2G048450 Rw2G051510 Rw3G025320 Rw4G003260 Rw4G007300 Rw4G009290 Rw4G010910 Rw4G013260 Rw5G008190 Rw5G008290 Rw5G018740 Rw5G023640 Rw5G028800 Rw5G031830 Rw5G041280 Rw5G044050 Rw6G007060 Rw6G008230 Rw6G009960 Rw6G013460 Rw6G014610 Rw6G017780 Rw6G033200 Rw7G021340 Rw7G023750 Rw7G032290 Rw7G032450 Rw7G033880 Rw7G038580 Rw7G040180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 869
AccII CGCG 1 cut(s) 1347
AciI CCGC 9 cut(s) 426, 794, 1189, 1259, 1294, 1324, 1342, 1345, 1522
AclWI GGATC 2 cut(s) 236, 1467
AcsI RAATTY 5 cut(s) 130, 380, 574, 894, 1196
AcyI GRCGYC 2 cut(s) 256, 1512
AfaI GTAC 3 cut(s) 29, 61, 272
AfiI CCNNNNNNNGG 2 cut(s) 933, 1263
AflII CTTAAG 1 cut(s) 337
AgsI TTSAA 7 cut(s) 280, 400, 515, 638, 790, 1063, 1142
AjnI CCWGG 1 cut(s) 244
AluBI AGCT 3 cut(s) 305, 980, 1214
AluI AGCT 3 cut(s) 305, 980, 1214
Alw26I GTCTC 2 cut(s) 559, 1512
AlwI GGATC 2 cut(s) 236, 1467
AoxI GGCC 4 cut(s) 748, 1233, 1238, 1265
ApeKI GCWGC 2 cut(s) 1331, 1365
ApoI RAATTY 5 cut(s) 130, 380, 574, 894, 1196
Asp700I GAANNNNTTC 1 cut(s) 1450
AspLEI GCGC 1 cut(s) 1349
AspS9I GGNCC 3 cut(s) 320, 1234, 1239
AsuC2I CCSGG 1 cut(s) 1237
AsuHPI GGTGA 3 cut(s) 655, 1205, 1452
AsuII TTCGAA 1 cut(s) 298
AsuNHI GCTAGC 1 cut(s) 1178
AvaII GGWCC 1 cut(s) 320
BauI CACGAG 1 cut(s) 852
BbvI GCAGC 2 cut(s) 1343, 1377
BccI CCATC 8 cut(s) 73, 172, 487, 492, 631, 1031, 1166, 1315
BciT130I CCWGG 1 cut(s) 246
BciVI GTATCC 1 cut(s) 974
BcnI CCSGG 1 cut(s) 1237
BcoDI GTCTC 2 cut(s) 559, 1512
BfaI CTAG 3 cut(s) 176, 233, 1179
BfmI CTRYAG 3 cut(s) 702, 1275, 1329
BfrI CTTAAG 1 cut(s) 337
BfuI GTATCC 1 cut(s) 974
BisI GCNGC 6 cut(s) 1294, 1324, 1332, 1342, 1345, 1366
BlsI GCNGC 6 cut(s) 1295, 1325, 1333, 1343, 1346, 1367
BmcAI AGTACT 1 cut(s) 272
Bme1390I CCNGG 2 cut(s) 246, 1237
Bme18I GGWCC 1 cut(s) 320
BmgT120I GGNCC 3 cut(s) 320, 1234, 1239
BmiI GGNNCC 1 cut(s) 1441
BmrFI CCNGG 2 cut(s) 246, 1237
BmsI GCATC 1 cut(s) 940
BmtI GCTAGC 1 cut(s) 1182
BoxI GACNNNNGTC 1 cut(s) 366
BpmI CTGGAG 1 cut(s) 1367
Bpu14I TTCGAA 1 cut(s) 298
BpuEI CTTGAG 1 cut(s) 437
BpuMI CCSGG 1 cut(s) 1237
Bsa29I ATCGAT 1 cut(s) 1506
BsaBI GATNNNNATC 1 cut(s) 474
BsaHI GRCGYC 2 cut(s) 256, 1512
BsaI GGTCTC 1 cut(s) 1512
BsaJI CCNNGG 1 cut(s) 730
BsaWI WCCGGW 1 cut(s) 1527
BsaXI ACNNNNNCTCC 4 cut(s) 91, 97, 121, 127
Bsc4I CCNNNNNNNGG 2 cut(s) 933, 1263
Bse118I RCCGGY 1 cut(s) 1296
Bse3DI GCAATG 1 cut(s) 1360
Bse8I GATNNNNATC 1 cut(s) 474
BseBI CCWGG 1 cut(s) 246
BseCI ATCGAT 1 cut(s) 1506
BseDI CCNNGG 1 cut(s) 730
BseGI GGATG 4 cut(s) 479, 487, 740, 802
BseJI GATNNNNATC 1 cut(s) 474
BseLI CCNNNNNNNGG 2 cut(s) 933, 1263
BseMI GCAATG 1 cut(s) 1360
BseMII CTCAG 3 cut(s) 117, 492, 1429
BseXI GCAGC 2 cut(s) 1343, 1377
Bsh1236I CGCG 1 cut(s) 1347
Bsh1285I CGRYCG 1 cut(s) 1506
BshFI GGCC 4 cut(s) 750, 1235, 1240, 1267
BshVI ATCGAT 1 cut(s) 1506
BsiEI CGRYCG 1 cut(s) 1506
BsiSI CCGG 4 cut(s) 688, 1237, 1297, 1528
BslFI GGGAC 1 cut(s) 131
BslI CCNNNNNNNGG 2 cut(s) 933, 1263
BsmAI GTCTC 2 cut(s) 559, 1512
BsmFI GGGAC 1 cut(s) 131
BsmI GAATGC 1 cut(s) 865
BsnI GGCC 4 cut(s) 750, 1235, 1240, 1267
Bso31I GGTCTC 1 cut(s) 1512
Bsp119I TTCGAA 1 cut(s) 298
Bsp143I GATC 7 cut(s) 7, 241, 1135, 1434, 1457, 1472, 1503
BspACI CCGC 9 cut(s) 426, 794, 1189, 1259, 1294, 1324, 1342, 1345, 1522
BspANI GGCC 4 cut(s) 750, 1235, 1240, 1267
BspCNI CTCAG 3 cut(s) 118, 493, 1428
BspDI ATCGAT 1 cut(s) 1506
BspFNI CGCG 1 cut(s) 1347
BspLI GGNNCC 1 cut(s) 1441
BspMAI CTGCAG 2 cut(s) 1279, 1333
BspOI GCTAGC 1 cut(s) 1182
BspPI GGATC 2 cut(s) 236, 1467
BspQI GCTCTTC 1 cut(s) 295
BspT104I TTCGAA 1 cut(s) 298
BspTI CTTAAG 1 cut(s) 337
BspTNI GGTCTC 1 cut(s) 1512
BsrDI GCAATG 1 cut(s) 1360
BsrFI RCCGGY 1 cut(s) 1296
BssAI RCCGGY 1 cut(s) 1296
BssECI CCNNGG 1 cut(s) 730
BssMI GATC 7 cut(s) 7, 241, 1135, 1434, 1457, 1472, 1503
BssNAI GTATAC 1 cut(s) 870
BssNI GRCGYC 2 cut(s) 256, 1512
BssSI CACGAG 1 cut(s) 852
BssT1I CCWWGG 1 cut(s) 730
Bst1107I GTATAC 1 cut(s) 870
Bst2BI CACGAG 1 cut(s) 852
Bst2UI CCWGG 1 cut(s) 246
Bst4CI ACNGT 2 cut(s) 324, 1056
Bst6I CTCTTC 3 cut(s) 174, 295, 1221
BstACI GRCGYC 2 cut(s) 256, 1512
BstAFI CTTAAG 1 cut(s) 337
BstBI TTCGAA 1 cut(s) 298
BstC8I GCNNGC 5 cut(s) 727, 1180, 1298, 1302, 1391
BstDEI CTNAG 8 cut(s) 126, 316, 390, 501, 614, 627, 1070, 1415
BstF5I GGATG 4 cut(s) 479, 487, 740, 802
BstFNI CGCG 1 cut(s) 1347
BstHHI GCGC 1 cut(s) 1349
BstKTI GATC 7 cut(s) 10, 244, 1138, 1437, 1460, 1475, 1506
BstMAI GTCTC 2 cut(s) 559, 1512
BstMBI GATC 7 cut(s) 7, 241, 1135, 1434, 1457, 1472, 1503
BstMCI CGRYCG 1 cut(s) 1506
BstNI CCWGG 1 cut(s) 246
BstPAI GACNNNNGTC 1 cut(s) 366
BstSCI CCNGG 2 cut(s) 244, 1235
BstSFI CTRYAG 3 cut(s) 702, 1275, 1329
BstUI CGCG 1 cut(s) 1347
BstV1I GCAGC 2 cut(s) 1343, 1377
BstXI CCANNNNNNTGG 1 cut(s) 252
BstZ17I GTATAC 1 cut(s) 870
Bsu15I ATCGAT 1 cut(s) 1506
BsuI GTATCC 1 cut(s) 974
BsuRI GGCC 4 cut(s) 750, 1235, 1240, 1267
BsuTUI ATCGAT 1 cut(s) 1506
BtgZI GCGATG 1 cut(s) 1293
BtsCI GGATG 4 cut(s) 479, 487, 740, 802
BtsI GCAGTG 2 cut(s) 1272, 1463
BtsIMutI CAGTG 2 cut(s) 1272, 1463
Cac8I GCNNGC 5 cut(s) 727, 1180, 1298, 1302, 1391
CfoI GCGC 1 cut(s) 1349
Cfr10I RCCGGY 1 cut(s) 1296
Cfr13I GGNCC 3 cut(s) 320, 1234, 1239
ClaI ATCGAT 1 cut(s) 1506
CseI GACGC 2 cut(s) 245, 1520
Csp6I GTAC 3 cut(s) 28, 60, 271
CviAII CATG 7 cut(s) 45, 506, 562, 595, 752, 1157, 1375
CviQI GTAC 3 cut(s) 28, 60, 271
DdeI CTNAG 8 cut(s) 126, 316, 390, 501, 614, 627, 1070, 1415
DpnI GATC 7 cut(s) 9, 243, 1137, 1436, 1459, 1474, 1505
DpnII GATC 7 cut(s) 7, 241, 1135, 1434, 1457, 1472, 1503
DraI TTTAAA 2 cut(s) 153, 900
Eam1104I CTCTTC 3 cut(s) 174, 295, 1221
EarI CTCTTC 3 cut(s) 174, 295, 1221
Eco130I CCWWGG 1 cut(s) 730
Eco31I GGTCTC 1 cut(s) 1512
Eco47I GGWCC 1 cut(s) 320
EcoRI GAATTC 1 cut(s) 130
EcoRII CCWGG 1 cut(s) 244
EcoT14I CCWWGG 1 cut(s) 730
EcoT22I ATGCAT 1 cut(s) 1158
ErhI CCWWGG 1 cut(s) 730
FaeI CATG 7 cut(s) 48, 509, 565, 598, 755, 1160, 1378
FaqI GGGAC 1 cut(s) 131
FatI CATG 7 cut(s) 44, 505, 561, 594, 751, 1156, 1374
FauI CCCGC 2 cut(s) 1182, 1266
FblI GTMKAC 1 cut(s) 869
Fnu4HI GCNGC 6 cut(s) 1294, 1324, 1332, 1342, 1345, 1366
FokI GGATG 4 cut(s) 466, 474, 747, 809
Fsp4HI GCNGC 6 cut(s) 1294, 1324, 1332, 1342, 1345, 1366
FspBI CTAG 3 cut(s) 176, 233, 1179
GlaI GCGC 1 cut(s) 1348
GluI GCNGC 6 cut(s) 1294, 1324, 1332, 1342, 1345, 1366
GsuI CTGGAG 1 cut(s) 1367
HaeIII GGCC 4 cut(s) 750, 1235, 1240, 1267
HapII CCGG 4 cut(s) 688, 1237, 1297, 1528
HgaI GACGC 2 cut(s) 245, 1520
HhaI GCGC 1 cut(s) 1349
Hin1I GRCGYC 2 cut(s) 256, 1512
Hin1II CATG 7 cut(s) 48, 509, 565, 598, 755, 1160, 1378
Hin6I GCGC 1 cut(s) 1347
HinP1I GCGC 1 cut(s) 1347
HindIII AAGCTT 1 cut(s) 1212
HinfI GANTC 8 cut(s) 567, 608, 684, 758, 803, 931, 1423, 1483
HpaII CCGG 4 cut(s) 688, 1237, 1297, 1528
HphI GGTGA 3 cut(s) 655, 1205, 1452
Hpy166II GTNNAC 3 cut(s) 51, 870, 1208
Hpy188I TCNGA 3 cut(s) 1418, 1439, 1477
Hpy188III TCNNGA 5 cut(s) 233, 935, 1384, 1427, 1455
Hpy8I GTNNAC 3 cut(s) 51, 870, 1208
HpyAV CCTTC 3 cut(s) 168, 359, 1366
HpyCH4III ACNGT 2 cut(s) 324, 1056
HpyCH4IV ACGT 1 cut(s) 238
HpyCH4V TGCA 6 cut(s) 267, 598, 1156, 1277, 1331, 1365
HpyF3I CTNAG 8 cut(s) 126, 316, 390, 501, 614, 627, 1070, 1415
HpySE526I ACGT 1 cut(s) 238
Hsp92I GRCGYC 2 cut(s) 256, 1512
Hsp92II CATG 7 cut(s) 48, 509, 565, 598, 755, 1160, 1378
HspAI GCGC 1 cut(s) 1347
KroI GCCGGC 1 cut(s) 1296
KroNI GCCGGC 1 cut(s) 1298
Kzo9I GATC 7 cut(s) 7, 241, 1135, 1434, 1457, 1472, 1503
LguI GCTCTTC 1 cut(s) 295
LmnI GCTCC 1 cut(s) 1439
Lsp1109I GCAGC 2 cut(s) 1343, 1377
LweI GCATC 1 cut(s) 940
MaeI CTAG 3 cut(s) 176, 233, 1179
MaeII ACGT 1 cut(s) 238
MaeIII GTNAC 6 cut(s) 121, 287, 344, 609, 911, 1377
MalI GATC 7 cut(s) 9, 243, 1137, 1436, 1459, 1474, 1505
MboI GATC 7 cut(s) 7, 241, 1135, 1434, 1457, 1472, 1503
MboII GAAGA 7 cut(s) 191, 221, 312, 825, 1010, 1130, 1238
MluCI AATT 8 cut(s) 130, 198, 380, 574, 766, 784, 894, 1196
MlyI GAGTC 3 cut(s) 576, 617, 678
MmeI TCCRAC 2 cut(s) 414, 500
MnlI CCTC 5 cut(s) 18, 342, 740, 931, 1424
Mph1103I ATGCAT 1 cut(s) 1158
MroNI GCCGGC 1 cut(s) 1296
MroXI GAANNNNTTC 1 cut(s) 1450
MseI TTAA 8 cut(s) 138, 152, 338, 384, 572, 765, 899, 1200
MslI CAYNNNNRTG 1 cut(s) 1373
MspCI CTTAAG 1 cut(s) 337
MspI CCGG 4 cut(s) 688, 1237, 1297, 1528
MspR9I CCNGG 2 cut(s) 246, 1237
Mva1269I GAATGC 1 cut(s) 865
MvaI CCWGG 1 cut(s) 246
MvnI CGCG 1 cut(s) 1347
NaeI GCCGGC 1 cut(s) 1298
NciI CCSGG 1 cut(s) 1237
NdeII GATC 7 cut(s) 7, 241, 1135, 1434, 1457, 1472, 1503
NgoMIV GCCGGC 1 cut(s) 1296
NheI GCTAGC 1 cut(s) 1178
NlaIII CATG 7 cut(s) 48, 509, 565, 598, 755, 1160, 1378
NlaIV GGNNCC 1 cut(s) 1441
NmuCI GTSAC 4 cut(s) 121, 287, 609, 1377
NsiI ATGCAT 1 cut(s) 1158
NspV TTCGAA 1 cut(s) 298
PciSI GCTCTTC 1 cut(s) 295
PctI GAATGC 1 cut(s) 865
PdiI GCCGGC 1 cut(s) 1298
PdmI GAANNNNTTC 1 cut(s) 1450
PfeI GAWTC 5 cut(s) 758, 803, 931, 1423, 1483
PfoI TCCNGGA 1 cut(s) 244
PkrI GCNGC 6 cut(s) 1295, 1325, 1333, 1343, 1346, 1367
Ple19I CGATCG 1 cut(s) 1506
PleI GAGTC 3 cut(s) 575, 616, 678
PpsI GAGTC 3 cut(s) 575, 616, 678
PshAI GACNNNNGTC 1 cut(s) 366
Psp6I CCWGG 1 cut(s) 244
PspGI CCWGG 1 cut(s) 244
PspN4I GGNNCC 1 cut(s) 1441
PspPI GGNCC 3 cut(s) 320, 1234, 1239
PstI CTGCAG 2 cut(s) 1279, 1333
PvuI CGATCG 1 cut(s) 1506
RsaI GTAC 3 cut(s) 29, 61, 272
RsaNI GTAC 3 cut(s) 28, 60, 271
RseI CAYNNNNRTG 1 cut(s) 1373
SapI GCTCTTC 1 cut(s) 295
SaqAI TTAA 8 cut(s) 138, 152, 338, 384, 572, 765, 899, 1200
SatI GCNGC 6 cut(s) 1294, 1324, 1332, 1342, 1345, 1366
Sau3AI GATC 7 cut(s) 7, 241, 1135, 1434, 1457, 1472, 1503
Sau96I GGNCC 3 cut(s) 320, 1234, 1239
ScaI AGTACT 1 cut(s) 272
SchI GAGTC 3 cut(s) 576, 617, 678
ScrFI CCNGG 2 cut(s) 246, 1237
SfaNI GCATC 1 cut(s) 940
SfcI CTRYAG 3 cut(s) 702, 1275, 1329
SfuI TTCGAA 1 cut(s) 298
SinI GGWCC 1 cut(s) 320
SmiMI CAYNNNNRTG 1 cut(s) 1373
SmlI CTYRAG 2 cut(s) 337, 416
SmoI CTYRAG 2 cut(s) 337, 416
Sse9I AATT 8 cut(s) 130, 198, 380, 574, 766, 784, 894, 1196
SsiI CCGC 9 cut(s) 426, 794, 1189, 1259, 1294, 1324, 1342, 1345, 1522
SspI AATATT 2 cut(s) 295, 589
SspMI CTAG 3 cut(s) 176, 233, 1179
StyD4I CCNGG 2 cut(s) 244, 1235
StyI CCWWGG 1 cut(s) 730
TaaI ACNGT 2 cut(s) 324, 1056
TaiI ACGT 1 cut(s) 241
TaqI TCGA 6 cut(s) 81, 298, 376, 1021, 1454, 1506
TasI AATT 8 cut(s) 130, 198, 380, 574, 766, 784, 894, 1196
TatI WGTACW 1 cut(s) 270
TauI GCSGC 4 cut(s) 1296, 1326, 1344, 1347
TfiI GAWTC 5 cut(s) 758, 803, 931, 1423, 1483
Tru1I TTAA 8 cut(s) 138, 152, 338, 384, 572, 765, 899, 1200
Tru9I TTAA 8 cut(s) 138, 152, 338, 384, 572, 765, 899, 1200
TscAI CASTG 2 cut(s) 1279, 1470
TseFI GTSAC 4 cut(s) 121, 287, 609, 1377
TseI GCWGC 2 cut(s) 1331, 1365
Tsp45I GTSAC 4 cut(s) 121, 287, 609, 1377
TspDTI ATGAA 5 cut(s) 207, 759, 771, 833, 990
TspRI CASTG 2 cut(s) 1279, 1470
Vha464I CTTAAG 1 cut(s) 337
VpaK11BI GGWCC 1 cut(s) 320
XapI RAATTY 5 cut(s) 130, 380, 574, 894, 1196
XbaI TCTAGA 1 cut(s) 232
XmiI GTMKAC 1 cut(s) 869
XmnI GAANNNNTTC 1 cut(s) 1450
XspI CTAG 3 cut(s) 176, 233, 1179
ZrmI AGTACT 1 cut(s) 272
Zsp2I ATGCAT 1 cut(s) 1158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.