RchiOBHm_Chr2g0149851

52 kDa repressor of the inhibitor of the protein kinase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000122
Physical Location & Seq
Forward (+)
67677915 .. 67680465
2551 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ51924

Sequence Viewer

Length: 1671 bp
ATGCTATTCGTTTTCTCGCAGTTCAGGGATGTGCTTTTAGAGGTCACGACAGAGTCACAAAATCAAGCAATACAAAAGGAAATTTTGCAAGTTATTGCGAGCAAAGTGCGGAAAAAGATTCGAGAAGATGTTGGAGATTCTAAATTTTGTATTATCGTTGATGAGGCCCGTGACGAGTCTAAGAGAGAACAAATGGCTCTTGTTTTGAGATTTGTTGATGGAGAAGGTTTTATACAAGAGCGCTTCTTTGATCTTTCTCATGTTAAAGACACTGGAGCTGCAACTCTAAAGAATGAAATATGTGTCATTCTTTCTCGTCATTCACTTGATGTTCAAAATATTCGTGGACAAGGGTATGATGGAGCAAGCAATATGCGAGGTGAGTGGAAAGGATTGCAAGCATTATTTCTAAATGATTGTCCATATACATACTATGTACATTGCTTCGCACACCGCTTGCAATTGGCATTAGTTGCTGCATCAAGAGAGGTAATTCCTGTCCATAATTTTTTCTCTCATTTGAGCTTTGTTATAAATGTGGTTGTTTCTTCTTGTAAATGTCATGATGAGTTACAAGATGCTCAAATAGAAGAAATAGCACATTTATTATCTATTGATGAACTTGAAAGTGGAAAGGGAGCTAATCAGATTGGCACTTTGAAACGACCTAGTGATACTCGATGGAGCTCATATTTTCTTTCTTTATGTAGCCTAGTGAGACTATTTGGTCCAACTATTGCAGTGCTTGAAAAAATTGAGAAAGAAAGTTCCAATTATTGCCAACTTGGTGATGCTAATGCAGCTTGCAAAATGGTTACTTCATTTGAGTTTATTTTCATCCTCCATTTGATGAAGGAGATCATGGGTATCACAAATGGTCTTTGTCAAGCCTTGCAACAGAAAAATCAAGACATTTTGAATGCTATGCATTTAGTTTCAGATACAAAGGCACTTATCCAAAAGTTTAGAGAAGATGGTTGGGAAAATTTTCTTGGGAAAGTCATTTCATTCTCTAATAAATATGAAATTGATATTCCTGACTTAAATGCTCCTTATTTTGAAGGTCGAAGTCGTCGTCGCAAAAGAGATGTTACATTGGAGCATCATTTTCATGTTGATATATTTGTTGCTGCTATAGATGTTCAATTGCAGGAGCTTAATTGTAGGTTTGGTGAATCTGCTATGGAGCTTCTAACACTTGGCAGTGCTTTGGAACCCAAAAATGCATACAAGTCATTCAATATTGAAACCATATGTCTTCTTGTTGAGAAGTATTATCCTCTTGATTTTACTGAGCAAGAGAAAATTAATTTGAGATTTCAATTGAGGTCTTTTGAGATTGATGTGCATAGTCATCCAGAATTGCAATCACTGTCATCTATTCCACAATTATGTCGGAGGTTAGTGGAGACTGAAAGGGTAAGTAGATATTATCTTATTGATAGATTAATTCGTTTTATATTAACTCTTCCAGTATCTACTGCAACCAGTGAGAGAGCATTTTCGGCGATGAAAATCATTAAAACAAGGCTTAGAAACAAAATGGAGGATGATTTTTTGGCAGATAACTTGGCGGTCTACATTGAGAGAGAAATTGCTAAGAGCTTCAATTCTGATTCTATACTTGATGGCTTTAGTTCTATAAAAGAGCGTAGAGTACTATTTAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

556

Amino Acids

63.9

Weight (kDa)

6.06

Isoelectric Point (pI)

46.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 21 - 131 1.9e-26 Domain of unknown function (DUF4371)
Dimer_Tnp_hAT PF05699 474 - 531 2.1e-07 hAT family C-terminal dimerisation region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19260 AT1G41920 AT1G42710 AT2G06541 AT2G06541 AT3G29450 AT3G29763 AT3G29765 AT3G31402 AT3G31402 AT4G09660
fragaria_vesca FvH4_1g22711 FvH4_3g10612 FvH4_3g23261 FvH4_3g31623 FvH4_3g33391 FvH4_3g37321 FvH4_3g43192 FvH4_3g43193 FvH4_4g00181 FvH4_4g00251 FvH4_4g08751 FvH4_4g15271 FvH4_5g27190 FvH4_6g02122 FvH4_6g26880 FvH4_6g35121 FvH4_7g16871 FvH4_7g19080 FvH4_7g30071
malus_domestica MD02G1162100.v1.1 MD03G1081700.v1.1 MD09G1280500.v1.1 MD12G1083800.v1.1 MD12G1128200.v1.1
prunus_persica Prupe.7G129800_v2.0.a1
pyrus_communis pycom01g08000 pycom02g13840 pycom02g18030 pycom04g01290 pycom04g12580 pycom05g02550 pycom05g06740 pycom05g26200 pycom07g09850 pycom08g10610 pycom10g11280 pycom11g12580 pycom11g22260 pycom12g18440 pycom13g20080 pycom15g25600 pycom16g23600 pycom17g10070
rosa_chinensis RchiOBHm_Chr1g0313551 RchiOBHm_Chr1g0364331 RchiOBHm_Chr1g0369741 RchiOBHm_Chr1g0380371 RchiOBHm_Chr2g0097391 RchiOBHm_Chr2g0113561 RchiOBHm_Chr2g0114151 RchiOBHm_Chr2g0119761 RchiOBHm_Chr2g0149851 RchiOBHm_Chr2g0151931 RchiOBHm_Chr2g0166411 RchiOBHm_Chr3g0453661 RchiOBHm_Chr3g0466101 RchiOBHm_Chr3g0477911 RchiOBHm_Chr3g0486441 RchiOBHm_Chr4g0390161 RchiOBHm_Chr4g0392191 RchiOBHm_Chr4g0414461 RchiOBHm_Chr4g0421421 RchiOBHm_Chr5g0023801 RchiOBHm_Chr5g0040121 RchiOBHm_Chr5g0045381 RchiOBHm_Chr5g0061511 RchiOBHm_Chr5g0062621 RchiOBHm_Chr5g0064161 RchiOBHm_Chr5g0068711 RchiOBHm_Chr6g0246041 RchiOBHm_Chr6g0252511 RchiOBHm_Chr6g0252521 RchiOBHm_Chr6g0263361 RchiOBHm_Chr6g0269451 RchiOBHm_Chr6g0275351 RchiOBHm_Chr6g0288481 RchiOBHm_Chr6g0310011 RchiOBHm_Chr6g0310021 RchiOBHm_Chr7g0223071 RchiOBHm_Chr7g0227621 RchiOBHm_Chr7g0242581
rosa_laevigata RLG00000033957
rosa_multiflora Rmu_co8455865.1_g000001 Rmu_sc0000021.1_g000011 Rmu_sc0000079.1_g000049 Rmu_sc0000087.1_g000015 Rmu_sc0000151.1_g000008 Rmu_sc0000365.1_g000014 Rmu_sc0000446.1_g000054 Rmu_sc0000446.1_g000055 Rmu_sc0000534.1_g000006 Rmu_sc0000724.1_g000020 Rmu_sc0000859.1_g000001 Rmu_sc0000876.1_g000002 Rmu_sc0000881.1_g000005 Rmu_sc0000929.1_g000014 Rmu_sc0001112.1_g000004 Rmu_sc0001136.1_g000009 Rmu_sc0001353.1_g000064 Rmu_sc0001662.1_g000005 Rmu_sc0001764.1_g000006 Rmu_sc0001982.1_g000015 Rmu_sc0002052.1_g000008 Rmu_sc0002052.1_g000009 Rmu_sc0002158.1_g000011 Rmu_sc0002285.1_g000005 Rmu_sc0002983.1_g000025 Rmu_sc0003063.1_g000006 Rmu_sc0003076.1_g000005 Rmu_sc0003221.1_g000053 Rmu_sc0003382.1_g000010 Rmu_sc0003733.1_g000054 Rmu_sc0003997.1_g000005 Rmu_sc0004283.1_g000008 Rmu_sc0004283.1_g000053 Rmu_sc0004509.1_g000007 Rmu_sc0004540.1_g000028 Rmu_sc0004657.1_g000005 Rmu_sc0004935.1_g000006 Rmu_sc0005072.1_g000003 Rmu_sc0005248.1_g000001 Rmu_sc0006161.1_g000001 Rmu_sc0006209.1_g000005 Rmu_sc0006576.1_g000018 Rmu_sc0006576.1_g000019 Rmu_sc0007121.1_g000016 Rmu_sc0007121.1_g000032 Rmu_sc0007753.1_g000016 Rmu_sc0007795.1_g000009 Rmu_sc0007841.1_g000019 Rmu_sc0008339.1_g000021 Rmu_sc0008339.1_g000022 Rmu_sc0008432.1_g000001 Rmu_sc0008633.1_g000009 Rmu_sc0009104.1_g000013 Rmu_sc0011469.1_g000001 Rmu_sc0012039.1_g000001 Rmu_sc0013947.1_g000007 Rmu_sc0015560.1_g000001 Rmu_sc0017369.1_g000001 Rmu_sc0021648.1_g000001 Rmu_sc0022867.1_g000003 Rmu_sc0027801.1_g000001 Rmu_sc0027801.1_g000002 Rmu_sc0029861.1_g000001 Rmu_sc0030314.1_g000001 Rmu_sc0040149.1_g000001 Rmu_ssc0000089.1_g000028 Rmu_ssc0000480.1_g000033
rosa_roxburghii Rroxscaffold_1G00002540 Rroxscaffold_1G00013960 Rroxscaffold_1G00041160 Rroxscaffold_1G00045580 Rroxscaffold_3G00247310 Rroxscaffold_3G00267070 Rroxscaffold_4G00313830 Rroxscaffold_5G00372270 Rroxscaffold_6G00404800 Rroxscaffold_6G00406090
rosa_rugosa Rorug03G0269800 Rorug04G0142900 Rorug04G0152600 Rorug05G0223300.1 Rorug05G0266400 Rorug06G0008900 Rorug07G0086000 Rorug07G0205800 Rorug07G0270900
rosa_wichuraiana Rw0G001600 Rw0G017220 Rw0G017620 Rw0G018380 Rw1G002320 Rw1G020940 Rw1G021200 Rw1G022610 Rw1G038680 Rw2G013320 Rw2G016850 Rw2G024020 Rw2G025210 Rw2G032270 Rw2G039490 Rw2G041630 Rw2G048450 Rw2G051510 Rw3G025320 Rw4G003260 Rw4G007300 Rw4G009290 Rw4G010910 Rw4G013260 Rw5G008190 Rw5G008290 Rw5G018740 Rw5G023640 Rw5G028800 Rw5G031830 Rw5G041280 Rw5G044050 Rw6G007060 Rw6G008230 Rw6G009960 Rw6G013460 Rw6G014610 Rw6G017780 Rw6G033200 Rw7G021340 Rw7G023750 Rw7G032290 Rw7G032450 Rw7G033880 Rw7G038580 Rw7G040180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 533
AasI GACNNNNNNGTC 1 cut(s) 726
AccI GTMKAC 1 cut(s) 1578
AciI CCGC 3 cut(s) 109, 454, 1574
AcsI RAATTY 3 cut(s) 81, 143, 985
AfaI GTAC 2 cut(s) 438, 1659
AfeI AGCGCT 1 cut(s) 242
AjuI GAANNNNNNNTTGG 2 cut(s) 975, 1007
AluBI AGCT 8 cut(s) 278, 525, 641, 687, 803, 1156, 1189, 1605
AluI AGCT 8 cut(s) 278, 525, 641, 687, 803, 1156, 1189, 1605
Alw21I GWGCWC 1 cut(s) 689
Alw26I GTCTC 2 cut(s) 712, 1403
Aor51HI AGCGCT 1 cut(s) 242
AoxI GGCC 1 cut(s) 165
ApeKI GCWGC 4 cut(s) 278, 476, 800, 1130
ApoI RAATTY 3 cut(s) 81, 143, 985
ArsI GACNNNNNNTTYG 2 cut(s) 1060, 1092
AseI ATTAAT 2 cut(s) 1308, 1448
Asp700I GAANNNNTTC 1 cut(s) 987
AspLEI GCGC 1 cut(s) 243
AspS9I GGNCC 2 cut(s) 166, 728
AsuHPI GGTGA 3 cut(s) 392, 800, 1184
AvaII GGWCC 1 cut(s) 728
BanII GRGCYC 1 cut(s) 689
BarI GAAGNNNNNNTAC 2 cut(s) 216, 248
BbsI GAAGAC 1 cut(s) 1250
Bbv12I GWGCWC 1 cut(s) 689
BbvI GCAGC 4 cut(s) 265, 463, 812, 1117
BccI CCATC 5 cut(s) 212, 353, 675, 968, 1622
BcgI CGANNNNNNTGC 2 cut(s) 88, 122
BcoDI GTCTC 2 cut(s) 712, 1403
BfaI CTAG 2 cut(s) 669, 713
BfmI CTRYAG 1 cut(s) 1134
BfoI RGCGCY 1 cut(s) 244
BisI GCNGC 4 cut(s) 279, 477, 801, 1131
BlsI GCNGC 4 cut(s) 280, 478, 802, 1132
BmcAI AGTACT 1 cut(s) 1659
Bme18I GGWCC 1 cut(s) 728
BmgT120I GGNCC 2 cut(s) 166, 728
BmiI GGNNCC 1 cut(s) 1215
BmsI GCATC 4 cut(s) 488, 568, 781, 1111
BpiI GAAGAC 1 cut(s) 1250
BpmI CTGGAG 1 cut(s) 294
BsaBI GATNNNNATC 1 cut(s) 1514
Bse1I ACTGG 3 cut(s) 277, 1472, 1488
Bse3DI GCAATG 1 cut(s) 439
Bse8I GATNNNNATC 1 cut(s) 1514
BseGI GGATG 4 cut(s) 34, 837, 1354, 1555
BseJI GATNNNNATC 1 cut(s) 1514
BseMI GCAATG 1 cut(s) 439
BseMII CTCAG 1 cut(s) 1284
BseNI ACTGG 3 cut(s) 277, 1472, 1488
BseXI GCAGC 4 cut(s) 265, 463, 812, 1117
BshFI GGCC 1 cut(s) 167
BsiHKAI GWGCWC 1 cut(s) 689
BsmAI GTCTC 2 cut(s) 712, 1403
BsmI GAATGC 1 cut(s) 925
BsnI GGCC 1 cut(s) 167
Bsp1286I GDGCHC 1 cut(s) 689
Bsp1407I TGTACA 1 cut(s) 436
Bsp143I GATC 2 cut(s) 250, 858
BspACI CCGC 3 cut(s) 109, 454, 1574
BspANI GGCC 1 cut(s) 167
BspCNI CTCAG 1 cut(s) 1285
BspHI TCATGA 1 cut(s) 562
BspLI GGNNCC 1 cut(s) 1215
BsrDI GCAATG 1 cut(s) 439
BsrGI TGTACA 1 cut(s) 436
BsrI ACTGG 3 cut(s) 277, 1472, 1488
BssMI GATC 2 cut(s) 250, 858
Bst4CI ACNGT 1 cut(s) 1374
Bst6I CTCTTC 1 cut(s) 1473
BstAPI GCANNNNNTGC 1 cut(s) 473
BstAUI TGTACA 1 cut(s) 436
BstC8I GCNNGC 5 cut(s) 100, 367, 399, 458, 805
BstDEI CTNAG 4 cut(s) 180, 1293, 1532, 1599
BstF5I GGATG 4 cut(s) 34, 837, 1354, 1555
BstH2I RGCGCY 1 cut(s) 244
BstHHI GCGC 1 cut(s) 243
BstKTI GATC 2 cut(s) 253, 861
BstMAI GTCTC 2 cut(s) 712, 1403
BstMBI GATC 2 cut(s) 250, 858
BstMWI GCNNNNNNNGC 3 cut(s) 473, 800, 1505
BstSFI CTRYAG 1 cut(s) 1134
BstV1I GCAGC 4 cut(s) 265, 463, 812, 1117
BstV2I GAAGAC 1 cut(s) 1250
BsuRI GGCC 1 cut(s) 167
BtgZI GCGATG 1 cut(s) 1523
BtsCI GGATG 4 cut(s) 34, 837, 1354, 1555
BtsI GCAGTG 2 cut(s) 747, 1210
BtsIMutI CAGTG 5 cut(s) 270, 747, 1210, 1370, 1495
Cac8I GCNNGC 5 cut(s) 100, 367, 399, 458, 805
CciI TCATGA 1 cut(s) 562
CfoI GCGC 1 cut(s) 243
Cfr13I GGNCC 2 cut(s) 166, 728
Csp6I GTAC 2 cut(s) 437, 1658
CviAII CATG 4 cut(s) 260, 563, 862, 1112
CviQI GTAC 2 cut(s) 437, 1658
DdeI CTNAG 4 cut(s) 180, 1293, 1532, 1599
DpnI GATC 2 cut(s) 252, 860
DpnII GATC 2 cut(s) 250, 858
DraI TTTAAA 1 cut(s) 1666
DrdI GACNNNNNNGTC 1 cut(s) 726
DseDI GACNNNNNNGTC 1 cut(s) 726
Eam1104I CTCTTC 1 cut(s) 1473
EarI CTCTTC 1 cut(s) 1473
Ecl136II GAGCTC 1 cut(s) 687
Eco24I GRGCYC 1 cut(s) 689
Eco47I GGWCC 1 cut(s) 728
Eco47III AGCGCT 1 cut(s) 242
Eco53kI GAGCTC 1 cut(s) 687
EcoICRI GAGCTC 1 cut(s) 687
EcoT22I ATGCAT 2 cut(s) 930, 1228
EcoT38I GRGCYC 1 cut(s) 689
FaeI CATG 4 cut(s) 263, 566, 865, 1115
FatI CATG 4 cut(s) 259, 562, 861, 1111
FauNDI CATATG 1 cut(s) 1253
FblI GTMKAC 1 cut(s) 1578
Fnu4HI GCNGC 4 cut(s) 279, 477, 801, 1131
FokI GGATG 4 cut(s) 41, 824, 1341, 1562
FriOI GRGCYC 1 cut(s) 689
Fsp4HI GCNGC 4 cut(s) 279, 477, 801, 1131
FspBI CTAG 2 cut(s) 669, 713
GlaI GCGC 1 cut(s) 242
GluI GCNGC 4 cut(s) 279, 477, 801, 1131
GsuI CTGGAG 1 cut(s) 294
HaeII RGCGCY 1 cut(s) 244
HaeIII GGCC 1 cut(s) 167
HhaI GCGC 1 cut(s) 243
Hin1II CATG 4 cut(s) 263, 566, 865, 1115
Hin6I GCGC 1 cut(s) 241
HinP1I GCGC 1 cut(s) 241
HinfI GANTC 6 cut(s) 53, 118, 137, 176, 1175, 1616
HphI GGTGA 3 cut(s) 392, 800, 1184
Hpy166II GTNNAC 2 cut(s) 347, 1579
Hpy188I TCNGA 4 cut(s) 648, 940, 1398, 1615
Hpy188III TCNNGA 8 cut(s) 46, 122, 483, 563, 908, 1037, 1283, 1358
Hpy8I GTNNAC 2 cut(s) 347, 1579
Hpy99I CGWCG 2 cut(s) 1077, 1080
HpyAV CCTTC 3 cut(s) 218, 847, 1055
HpyCH4III ACNGT 1 cut(s) 1374
HpyF10VI GCNNNNNNNGC 3 cut(s) 473, 800, 1505
HpyF3I CTNAG 4 cut(s) 180, 1293, 1532, 1599
Hsp92II CATG 4 cut(s) 263, 566, 865, 1115
HspAI GCGC 1 cut(s) 241
Kzo9I GATC 2 cut(s) 250, 858
LmnI GCTCC 8 cut(s) 275, 362, 638, 684, 1054, 1099, 1153, 1186
LpnPI CCDG 8 cut(s) 10, 258, 510, 1050, 1136, 1371, 1485, 1501
Lsp1109I GCAGC 4 cut(s) 265, 463, 812, 1117
LweI GCATC 4 cut(s) 488, 568, 781, 1111
MaeI CTAG 2 cut(s) 669, 713
MaeIII GTNAC 6 cut(s) 43, 54, 170, 570, 814, 1090
MalI GATC 2 cut(s) 252, 860
MboI GATC 2 cut(s) 250, 858
MboII GAAGA 6 cut(s) 137, 540, 602, 983, 1250, 1460
MfeI CAATTG 3 cut(s) 461, 1145, 1322
MhlI GDGCHC 1 cut(s) 689
MlyI GAGTC 2 cut(s) 62, 185
MmeI TCCRAC 3 cut(s) 112, 755, 1376
MnlI CCTC 9 cut(s) 34, 157, 371, 481, 851, 1290, 1320, 1392, 1540
Mph1103I ATGCAT 2 cut(s) 930, 1228
MroXI GAANNNNTTC 1 cut(s) 987
MseI TTAA 8 cut(s) 264, 1043, 1158, 1308, 1448, 1463, 1521, 1665
MslI CAYNNNNRTG 2 cut(s) 1110, 1390
MunI CAATTG 3 cut(s) 461, 1145, 1322
Mva1269I GAATGC 1 cut(s) 925
MwoI GCNNNNNNNGC 3 cut(s) 473, 800, 1505
NdeI CATATG 1 cut(s) 1253
NdeII GATC 2 cut(s) 250, 858
NlaIII CATG 4 cut(s) 263, 566, 865, 1115
NlaIV GGNNCC 1 cut(s) 1215
NmuCI GTSAC 3 cut(s) 43, 54, 170
NsiI ATGCAT 2 cut(s) 930, 1228
PagI TCATGA 1 cut(s) 562
PcsI WCGNNNNNNNCGW 1 cut(s) 1072
PctI GAATGC 1 cut(s) 925
PdmI GAANNNNTTC 1 cut(s) 987
PfeI GAWTC 4 cut(s) 118, 137, 1175, 1616
PflFI GACNNNGTC 1 cut(s) 52
PkrI GCNGC 4 cut(s) 280, 478, 802, 1132
PleI GAGTC 2 cut(s) 61, 184
PpsI GAGTC 2 cut(s) 61, 184
PshBI ATTAAT 2 cut(s) 1308, 1448
PsiI TTATAA 1 cut(s) 533
Psp124BI GAGCTC 1 cut(s) 689
PspN4I GGNNCC 1 cut(s) 1215
PspPI GGNCC 2 cut(s) 166, 728
PsyI GACNNNGTC 1 cut(s) 52
RsaI GTAC 2 cut(s) 438, 1659
RsaNI GTAC 2 cut(s) 437, 1658
RseI CAYNNNNRTG 2 cut(s) 1110, 1390
SacI GAGCTC 1 cut(s) 689
SaqAI TTAA 8 cut(s) 264, 1043, 1158, 1308, 1448, 1463, 1521, 1665
SatI GCNGC 4 cut(s) 279, 477, 801, 1131
Sau3AI GATC 2 cut(s) 250, 858
Sau96I GGNCC 2 cut(s) 166, 728
ScaI AGTACT 1 cut(s) 1659
SchI GAGTC 2 cut(s) 62, 185
SduI GDGCHC 1 cut(s) 689
SfaNI GCATC 4 cut(s) 488, 568, 781, 1111
SfcI CTRYAG 1 cut(s) 1134
SinI GGWCC 1 cut(s) 728
SmiI ATTTAAAT 1 cut(s) 1666
SmiMI CAYNNNNRTG 2 cut(s) 1110, 1390
SsiI CCGC 3 cut(s) 109, 454, 1574
SspI AATATT 2 cut(s) 340, 1243
SspMI CTAG 2 cut(s) 669, 713
SstI GAGCTC 1 cut(s) 689
SwaI ATTTAAAT 1 cut(s) 1666
TaaI ACNGT 1 cut(s) 1374
TaqI TCGA 3 cut(s) 121, 679, 1066
TatI WGTACW 2 cut(s) 436, 1657
TfiI GAWTC 4 cut(s) 118, 137, 1175, 1616
Tru1I TTAA 8 cut(s) 264, 1043, 1158, 1308, 1448, 1463, 1521, 1665
Tru9I TTAA 8 cut(s) 264, 1043, 1158, 1308, 1448, 1463, 1521, 1665
TscAI CASTG 5 cut(s) 277, 747, 1210, 1377, 1495
TseFI GTSAC 3 cut(s) 43, 54, 170
TseI GCWGC 4 cut(s) 278, 476, 800, 1130
Tsp45I GTSAC 3 cut(s) 43, 54, 170
TspDTI ATGAA 9 cut(s) 309, 633, 810, 826, 866, 996, 1038, 1100, 1526
TspRI CASTG 5 cut(s) 277, 747, 1210, 1377, 1495
Tth111I GACNNNGTC 1 cut(s) 52
VpaK11BI GGWCC 1 cut(s) 728
VspI ATTAAT 2 cut(s) 1308, 1448
XapI RAATTY 3 cut(s) 81, 143, 985
XmiI GTMKAC 1 cut(s) 1578
XmnI GAANNNNTTC 1 cut(s) 987
XspI CTAG 2 cut(s) 669, 713
ZrmI AGTACT 1 cut(s) 1659
Zsp2I ATGCAT 2 cut(s) 930, 1228
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.