Rw5G008190

Zinc finger MYM-type protein 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000122
Physical Location & Seq
Reverse (-)
8788400 .. 8790877
2478 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G008190.1

Sequence Viewer

Length: 2415 bp
ATGAAAGCCTTTTTAGAGAGGTATCATAAGAGAAAAGCAACCGAACAGTTGACACCACCTGAAGCTCCTCAAATAAGAAACACATCCAATGATGGTACTTCAGAACATCATTCTGAAGAATTGAACTTGACAAATCAGTTGGCACCCCCTCAATCCCATCGGACAAATAATGCATCTGAAGATATTGGTACTTCAAAATATTCTGTCAATGAGATTAATATAGAAGATCTTCCTGGAGATCCTGGACTTCGAACTCCGATTTTAGAGTACCATCCTAATGTTCAAGATCGAGTGCGAAGACATTATTTACTGCAAGGTCCTTGTCAACCAAAAAACTATAATTTTCCTCAAACAGAATTTAGTGGTGTTAAGCGAAGGTTTAACGTCAATTGGTTTAAGGATCATCCTAGTTGGTTGGAGTATAGTATAGAAAAGGATGCTGCATATTGTTTGCATTGTTATCTTTTTAAACCAAATATTGGAGACCAAGCAGGTGGTGATGTATTTGTTGACAAGCTTAAAGATCATGTTGGAGGGATCAATAGCGCTCACAACAATGCTAGAAGAATGTGTGAAGTTTTATTAAATCAAAGACAGCATGTTGATACAATTTTGGTGAACCAAACACAACAAGATCGAATTAACTATCGCACTCGTTTGAATGCATCAGTTGATTGTGCTCGTTTTCTACTACGACAAGGATTGCCATTTCGTGGACATGATGAATCTGATTATTCAAATAACCAAGGAAATTTTAGAGAGCTTTTGAAGTGGTATTCTGATAAAGTTGATGATATAAAAAAGGTTGTCTTGAAAAATGCTCCAAGAAATCATCAATTAACATCACCTGATATTCAACATGATATTGTCAAGGCTGCTGCAACTGAAACTCTCAATGTCATAATTAGTGACATTGGTGACGCATTATTCTCTATTCTTGTTGACGAGTCTCGTGATGTATCAGGAAAAGAGCAAATGGCAATTGTATTGCGATATGTGAGCAAAGGACAAGTAATTGAGCGTTTTGTCGGTGTTAAACATGTCACTGATACTACTTCTGCATCACTGAAGGCAGCCATTGATCAATTCTTTTCAGAGAATGGATTAAGCATATCTAGCCTCCGTGGTCAAGGTTATGATGGAGCTAGTAATATGAGAGGAGAATTCAATGGTCTAAAAGCACTTATTTTAAAGGAGAATGGGTCAACCTTTTACGTTCATTTCTTTGCTCACCAGCTTCAGCTGGCTATTGTGGCTGTAGCAAAAAATCATATCTTAATCTCTAATCTCTACATGTTTGTTGGTAATCTGGTGAATGTTGCTGGAAACTCATGTAAACGTCGTGATTCTCTTCGAGAGAAACAAGTTGCCAAGATTATCGAAGAACTTAATATTGGTTCTATTTTAAGTGGGAGGGGCTTGAATCAGGAAACCACCCTAAAGCGAGCTGGTGATACAAGATGGAGCTCACATTATGGTACTTTGATTAGTATCATCAACTTATTTCCATCTTTAGTTGAATTGCTTGAAGAAATAAAAGAGGATGGATCATCTACAGATCAGAAACAAGATGCAAGCAGATTCTTAGACTCATTGGAATCATTCGACTTTGTATTTAGTCTGCATTTGATGAAGGTTTTGTTGGGGACTACAAATCAATTATCACAGGCATTGCAAAGAATAGACCAAGATATTGTGAATGCAATGAACTTAGTTAAAGTGTGTAAGGAGCAATTGCAAAATATGAGAGACAATGGATGGGATTCTCTTCTTAGTCAAGTTGTTTCATTTTGTGAAAAACAGGAGATTGATGTTCCTAACATGGATGATGTTCCTTTTATTCCAGGAAAATCACGGCGCAGAGCTCCAAAGGTCACTAATCTGCATAGGTATCGAGTTGAATTATTTTGTGCAGTCATAGATTTGCAACTTCAAGAGCTAAATGATCATTTTACAGAGACTACTACCGAGCTACTTCTCTGTATGGCATGTCTTAATCCATCTAATTCATTCTCAGCTTTTAGCAAAGAAAAATTGATTCGGCTTGCTCAGTTTTATCTTAAAGATTTTTCTGCAGTATCTCTCTTGGCTCTTGAAGATGAAGTGGACACTTATATATCTGATATGCGAAGCAGTAGTGTGTTTACACAATTGAAAGGAATTAGTGACCTTGGAGAAAAAATGGTTGAGACACAGAAGGACAAGGTTTATCCATTAGTTTACTTGCTCATAACATTGACGCTAATTCTTCCAGTTGCAACTGCCACTGTAGAAAGAGCATTTTCTGCCATGAAGATCATAAAAAGTGATTTCAGCATGATTACATATATCGAGAAAGAAATATTTGATGGTATTGATAATGAAACCATCATGAAAAGATTTCAAAATATGAGCAATCGTCGTGGACAATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

804

Amino Acids

91.28

Weight (kDa)

6.29

Isoelectric Point (pI)

42.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 170 - 391 3.4e-77 Domain of unknown function (DUF4371)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19260 AT1G41920 AT1G42710 AT2G06541 AT2G06541 AT3G29450 AT3G29763 AT3G29765 AT3G31402 AT3G31402 AT4G09660
fragaria_vesca FvH4_1g22711 FvH4_3g10612 FvH4_3g23261 FvH4_3g31623 FvH4_3g33391 FvH4_3g37321 FvH4_3g43192 FvH4_3g43193 FvH4_4g00181 FvH4_4g00251 FvH4_4g08751 FvH4_4g15271 FvH4_5g27190 FvH4_6g02122 FvH4_6g26880 FvH4_6g35121 FvH4_7g16871 FvH4_7g19080 FvH4_7g30071
malus_domestica MD02G1162100.v1.1 MD03G1081700.v1.1 MD09G1280500.v1.1 MD12G1083800.v1.1 MD12G1128200.v1.1
prunus_persica Prupe.7G129800_v2.0.a1
pyrus_communis pycom01g08000 pycom02g13840 pycom02g18030 pycom04g01290 pycom04g12580 pycom05g02550 pycom05g06740 pycom05g26200 pycom07g09850 pycom08g10610 pycom10g11280 pycom11g12580 pycom11g22260 pycom12g18440 pycom13g20080 pycom15g25600 pycom16g23600 pycom17g10070
rosa_chinensis RchiOBHm_Chr1g0313551 RchiOBHm_Chr1g0364331 RchiOBHm_Chr1g0369741 RchiOBHm_Chr1g0380371 RchiOBHm_Chr2g0097391 RchiOBHm_Chr2g0113561 RchiOBHm_Chr2g0114151 RchiOBHm_Chr2g0119761 RchiOBHm_Chr2g0149851 RchiOBHm_Chr2g0151931 RchiOBHm_Chr2g0166411 RchiOBHm_Chr3g0453661 RchiOBHm_Chr3g0466101 RchiOBHm_Chr3g0477911 RchiOBHm_Chr3g0486441 RchiOBHm_Chr4g0390161 RchiOBHm_Chr4g0392191 RchiOBHm_Chr4g0414461 RchiOBHm_Chr4g0421421 RchiOBHm_Chr5g0023801 RchiOBHm_Chr5g0040121 RchiOBHm_Chr5g0045381 RchiOBHm_Chr5g0061511 RchiOBHm_Chr5g0062621 RchiOBHm_Chr5g0064161 RchiOBHm_Chr5g0068711 RchiOBHm_Chr6g0246041 RchiOBHm_Chr6g0252511 RchiOBHm_Chr6g0252521 RchiOBHm_Chr6g0263361 RchiOBHm_Chr6g0269451 RchiOBHm_Chr6g0275351 RchiOBHm_Chr6g0288481 RchiOBHm_Chr6g0310011 RchiOBHm_Chr6g0310021 RchiOBHm_Chr7g0223071 RchiOBHm_Chr7g0227621 RchiOBHm_Chr7g0242581
rosa_laevigata RLG00000033957
rosa_multiflora Rmu_co8455865.1_g000001 Rmu_sc0000021.1_g000011 Rmu_sc0000079.1_g000049 Rmu_sc0000087.1_g000015 Rmu_sc0000151.1_g000008 Rmu_sc0000365.1_g000014 Rmu_sc0000446.1_g000054 Rmu_sc0000446.1_g000055 Rmu_sc0000534.1_g000006 Rmu_sc0000724.1_g000020 Rmu_sc0000859.1_g000001 Rmu_sc0000876.1_g000002 Rmu_sc0000881.1_g000005 Rmu_sc0000929.1_g000014 Rmu_sc0001112.1_g000004 Rmu_sc0001136.1_g000009 Rmu_sc0001353.1_g000064 Rmu_sc0001662.1_g000005 Rmu_sc0001764.1_g000006 Rmu_sc0001982.1_g000015 Rmu_sc0002052.1_g000008 Rmu_sc0002052.1_g000009 Rmu_sc0002158.1_g000011 Rmu_sc0002285.1_g000005 Rmu_sc0002983.1_g000025 Rmu_sc0003063.1_g000006 Rmu_sc0003076.1_g000005 Rmu_sc0003221.1_g000053 Rmu_sc0003382.1_g000010 Rmu_sc0003733.1_g000054 Rmu_sc0003997.1_g000005 Rmu_sc0004283.1_g000008 Rmu_sc0004283.1_g000053 Rmu_sc0004509.1_g000007 Rmu_sc0004540.1_g000028 Rmu_sc0004657.1_g000005 Rmu_sc0004935.1_g000006 Rmu_sc0005072.1_g000003 Rmu_sc0005248.1_g000001 Rmu_sc0006161.1_g000001 Rmu_sc0006209.1_g000005 Rmu_sc0006576.1_g000018 Rmu_sc0006576.1_g000019 Rmu_sc0007121.1_g000016 Rmu_sc0007121.1_g000032 Rmu_sc0007753.1_g000016 Rmu_sc0007795.1_g000009 Rmu_sc0007841.1_g000019 Rmu_sc0008339.1_g000021 Rmu_sc0008339.1_g000022 Rmu_sc0008432.1_g000001 Rmu_sc0008633.1_g000009 Rmu_sc0009104.1_g000013 Rmu_sc0011469.1_g000001 Rmu_sc0012039.1_g000001 Rmu_sc0013947.1_g000007 Rmu_sc0015560.1_g000001 Rmu_sc0017369.1_g000001 Rmu_sc0021648.1_g000001 Rmu_sc0022867.1_g000003 Rmu_sc0027801.1_g000001 Rmu_sc0027801.1_g000002 Rmu_sc0029861.1_g000001 Rmu_sc0030314.1_g000001 Rmu_sc0040149.1_g000001 Rmu_ssc0000089.1_g000028 Rmu_ssc0000480.1_g000033
rosa_roxburghii Rroxscaffold_1G00002540 Rroxscaffold_1G00013960 Rroxscaffold_1G00041160 Rroxscaffold_1G00045580 Rroxscaffold_3G00247310 Rroxscaffold_3G00267070 Rroxscaffold_4G00313830 Rroxscaffold_5G00372270 Rroxscaffold_6G00404800 Rroxscaffold_6G00406090
rosa_rugosa Rorug03G0269800 Rorug04G0142900 Rorug04G0152600 Rorug05G0223300.1 Rorug05G0266400 Rorug06G0008900 Rorug07G0086000 Rorug07G0205800 Rorug07G0270900
rosa_wichuraiana Rw0G001600 Rw0G017220 Rw0G017620 Rw0G018380 Rw1G002320 Rw1G020940 Rw1G021200 Rw1G022610 Rw1G038680 Rw2G013320 Rw2G016850 Rw2G024020 Rw2G025210 Rw2G032270 Rw2G039490 Rw2G041630 Rw2G048450 Rw2G051510 Rw3G025320 Rw4G003260 Rw4G007300 Rw4G009290 Rw4G010910 Rw4G013260 Rw5G008190 Rw5G008290 Rw5G018740 Rw5G023640 Rw5G028800 Rw5G031830 Rw5G041280 Rw5G044050 Rw6G007060 Rw6G008230 Rw6G009960 Rw6G013460 Rw6G014610 Rw6G017780 Rw6G033200 Rw7G021340 Rw7G023750 Rw7G032290 Rw7G032450 Rw7G033880 Rw7G038580 Rw7G040180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 482
Acc36I ACCTGC 1 cut(s) 482
AccB1I GGYRCC 1 cut(s) 142
AccB7I CCANNNNNTGG 2 cut(s) 479, 713
AclWI GGATC 4 cut(s) 233, 408, 545, 1555
AcsI RAATTY 3 cut(s) 356, 751, 1163
AcuI CTGAAG 6 cut(s) 81, 84, 135, 198, 1088, 1223
AfaI GTAC 4 cut(s) 97, 190, 269, 1480
AfeI AGCGCT 1 cut(s) 547
AfiI CCNNNNNNNGG 2 cut(s) 479, 713
AflIII ACRYGT 2 cut(s) 1039, 1293
AjnI CCWGG 3 cut(s) 232, 241, 1843
AjuI GAANNNNNNNTTGG 4 cut(s) 1377, 1409, 1625, 1657
Alw21I GWGCWC 3 cut(s) 682, 1469, 1867
Alw26I GTCTC 5 cut(s) 477, 954, 1743, 1952, 2183
AlwI GGATC 4 cut(s) 233, 408, 545, 1555
Aor51HI AGCGCT 1 cut(s) 547
ApeKI GCWGC 4 cut(s) 440, 875, 878, 1073
ApoI RAATTY 3 cut(s) 356, 751, 1163
AseI ATTAAT 1 cut(s) 216
Asp700I GAANNNNTTC 1 cut(s) 228
AspLEI GCGC 2 cut(s) 548, 1860
AspS9I GGNCC 1 cut(s) 317
AsuHPI GGTGA 7 cut(s) 509, 628, 837, 929, 1223, 1324, 1463
AsuII TTCGAA 1 cut(s) 250
AvaII GGWCC 1 cut(s) 317
BanI GGYRCC 1 cut(s) 142
BanII GRGCYC 2 cut(s) 1469, 1867
BauI CACGAG 1 cut(s) 951
BbsI GAAGAC 1 cut(s) 304
Bbv12I GWGCWC 3 cut(s) 682, 1469, 1867
BbvI GCAGC 4 cut(s) 427, 862, 865, 1085
BceAI ACGGC 1 cut(s) 1871
BcgI CGANNNNNNTGC 2 cut(s) 1874, 1908
BciT130I CCWGG 3 cut(s) 234, 243, 1845
BclI TGATCA 2 cut(s) 1081, 1945
BcoDI GTCTC 5 cut(s) 477, 954, 1743, 1952, 2183
BfaI CTAG 4 cut(s) 408, 561, 1116, 1146
BfmI CTRYAG 4 cut(s) 1257, 1554, 2073, 2268
BfoI RGCGCY 1 cut(s) 549
BfuAI ACCTGC 1 cut(s) 482
BglII AGATCT 1 cut(s) 226
BisI GCNGC 4 cut(s) 441, 876, 879, 1074
BlsI GCNGC 4 cut(s) 442, 877, 880, 1075
Bme1390I CCNGG 3 cut(s) 234, 243, 1845
Bme18I GGWCC 1 cut(s) 317
BmgT120I GGNCC 1 cut(s) 317
BmiI GGNNCC 1 cut(s) 144
BmrFI CCNGG 3 cut(s) 234, 243, 1845
BmsI GCATC 5 cut(s) 182, 427, 674, 1070, 1561
BpiI GAAGAC 1 cut(s) 304
BpmI CTGGAG 1 cut(s) 255
Bpu14I TTCGAA 1 cut(s) 250
BsaBI GATNNNNATC 1 cut(s) 1490
BsaI GGTCTC 1 cut(s) 477
BsaJI CCNNGG 3 cut(s) 745, 1123, 2170
BsaXI ACNNNNNCTCC 2 cut(s) 1187, 1217
Bsc4I CCNNNNNNNGG 2 cut(s) 479, 713
Bse1I ACTGG 1 cut(s) 2252
Bse3DI GCAATG 2 cut(s) 1670, 1710
Bse8I GATNNNNATC 1 cut(s) 1490
BseBI CCWGG 3 cut(s) 234, 243, 1845
BseDI CCNNGG 3 cut(s) 745, 1123, 2170
BseGI GGATG 7 cut(s) 83, 271, 403, 442, 1549, 1763, 1831
BseJI GATNNNNATC 1 cut(s) 1490
BseLI CCNNNNNNNGG 2 cut(s) 479, 713
BseMI GCAATG 2 cut(s) 1670, 1710
BseMII CTCAG 2 cut(s) 2028, 2063
BseNI ACTGG 1 cut(s) 2252
BseRI GAGGAG 2 cut(s) 57, 1173
BseXI GCAGC 4 cut(s) 427, 862, 865, 1085
BsgI GTGCAG 1 cut(s) 1932
BshNI GGYRCC 1 cut(s) 142
BsiHKAI GWGCWC 3 cut(s) 682, 1469, 1867
BslFI GGGAC 1 cut(s) 1660
BslI CCNNNNNNNGG 2 cut(s) 479, 713
BsmAI GTCTC 5 cut(s) 477, 954, 1743, 1952, 2183
BsmFI GGGAC 1 cut(s) 1660
BsmI GAATGC 2 cut(s) 667, 1705
Bso31I GGTCTC 1 cut(s) 477
Bsp119I TTCGAA 1 cut(s) 250
Bsp1286I GDGCHC 3 cut(s) 682, 1469, 1867
BspCNI CTCAG 2 cut(s) 2027, 2062
BspHI TCATGA 1 cut(s) 2370
BspLI GGNNCC 1 cut(s) 144
BspMAI CTGCAG 1 cut(s) 2077
BspMI ACCTGC 1 cut(s) 482
BspPI GGATC 4 cut(s) 233, 408, 545, 1555
BspT104I TTCGAA 1 cut(s) 250
BspT107I GGYRCC 1 cut(s) 142
BspTNI GGTCTC 1 cut(s) 477
BsrDI GCAATG 2 cut(s) 1670, 1710
BsrI ACTGG 1 cut(s) 2252
BssECI CCNNGG 3 cut(s) 745, 1123, 2170
BssSI CACGAG 1 cut(s) 951
BssT1I CCWWGG 2 cut(s) 745, 2170
Bst2BI CACGAG 1 cut(s) 951
Bst2UI CCWGG 3 cut(s) 234, 243, 1845
Bst4CI ACNGT 2 cut(s) 48, 2269
Bst6I CTCTTC 2 cut(s) 1356, 1773
BstAPI GCANNNNNTGC 1 cut(s) 2285
BstBI TTCGAA 1 cut(s) 250
BstC8I GCNNGC 4 cut(s) 1245, 1446, 1576, 2046
BstDEI CTNAG 5 cut(s) 1585, 1711, 1772, 2014, 2049
BstDSI CCRYGG 1 cut(s) 1123
BstF5I GGATG 7 cut(s) 83, 271, 403, 442, 1549, 1763, 1831
BstH2I RGCGCY 1 cut(s) 549
BstHHI GCGC 2 cut(s) 548, 1860
BstMAI GTCTC 5 cut(s) 477, 954, 1743, 1952, 2183
BstMWI GCNNNNNNNGC 3 cut(s) 1116, 1253, 2285
BstNI CCWGG 3 cut(s) 234, 243, 1845
BstNSI RCATGY 4 cut(s) 602, 1043, 1297, 1992
BstSCI CCNGG 3 cut(s) 232, 241, 1843
BstSFI CTRYAG 4 cut(s) 1257, 1554, 2073, 2268
BstV1I GCAGC 4 cut(s) 427, 862, 865, 1085
BstV2I GAAGAC 1 cut(s) 304
BstX2I RGATCY 2 cut(s) 226, 238
BstXI CCANNNNNNTGG 1 cut(s) 494
BstYI RGATCY 2 cut(s) 226, 238
BtgI CCRYGG 1 cut(s) 1123
BtsCI GGATG 7 cut(s) 83, 271, 403, 442, 1549, 1763, 1831
BtsIMutI CAGTG 3 cut(s) 1044, 1064, 2265
BveI ACCTGC 1 cut(s) 482
Cac8I GCNNGC 4 cut(s) 1245, 1446, 1576, 2046
CciI TCATGA 1 cut(s) 2370
CfoI GCGC 2 cut(s) 548, 1860
Cfr13I GGNCC 1 cut(s) 317
CseI GACGC 2 cut(s) 929, 2248
Csp6I GTAC 4 cut(s) 96, 189, 268, 1479
CspCI CAANNNNNGTGG 1 cut(s) 2383
CviQI GTAC 4 cut(s) 96, 189, 268, 1479
DdeI CTNAG 5 cut(s) 1585, 1711, 1772, 2014, 2049
DraI TTTAAA 2 cut(s) 469, 1191
Eam1104I CTCTTC 2 cut(s) 1356, 1773
EarI CTCTTC 2 cut(s) 1356, 1773
Ecl136II GAGCTC 2 cut(s) 1467, 1865
Eco130I CCWWGG 2 cut(s) 745, 2170
Eco24I GRGCYC 2 cut(s) 1469, 1867
Eco31I GGTCTC 1 cut(s) 477
Eco47I GGWCC 1 cut(s) 317
Eco47III AGCGCT 1 cut(s) 547
Eco53kI GAGCTC 2 cut(s) 1467, 1865
Eco57I CTGAAG 6 cut(s) 81, 84, 135, 198, 1088, 1223
EcoICRI GAGCTC 2 cut(s) 1467, 1865
EcoO109I RGGNCCY 1 cut(s) 317
EcoRI GAATTC 1 cut(s) 1163
EcoRII CCWGG 3 cut(s) 232, 241, 1843
EcoT14I CCWWGG 2 cut(s) 745, 2170
EcoT22I ATGCAT 2 cut(s) 175, 667
EcoT38I GRGCYC 2 cut(s) 1469, 1867
ErhI CCWWGG 2 cut(s) 745, 2170
FalI AAGNNNNNCTT 2 cut(s) 794, 826
FaqI GGGAC 1 cut(s) 1660
FbaI TGATCA 2 cut(s) 1081, 1945
Fnu4HI GCNGC 4 cut(s) 441, 876, 879, 1074
FokI GGATG 7 cut(s) 70, 258, 390, 449, 1556, 1770, 1838
FriOI GRGCYC 2 cut(s) 1469, 1867
Fsp4HI GCNGC 4 cut(s) 441, 876, 879, 1074
FspBI CTAG 4 cut(s) 408, 561, 1116, 1146
GlaI GCGC 2 cut(s) 547, 1859
GluI GCNGC 4 cut(s) 441, 876, 879, 1074
GsuI CTGGAG 1 cut(s) 255
HaeII RGCGCY 1 cut(s) 549
HgaI GACGC 2 cut(s) 929, 2248
HhaI GCGC 2 cut(s) 548, 1860
Hin6I GCGC 2 cut(s) 546, 1858
HinP1I GCGC 2 cut(s) 546, 1858
HincII GTYRAC 5 cut(s) 51, 326, 511, 943, 1206
HindII GTYRAC 5 cut(s) 51, 326, 511, 943, 1206
HindIII AAGCTT 1 cut(s) 515
HinfI GANTC 9 cut(s) 725, 947, 1346, 1423, 1581, 1589, 1598, 1763, 2038
HphI GGTGA 7 cut(s) 509, 628, 837, 929, 1223, 1324, 1463
Hpy99I CGWCG 2 cut(s) 1344, 2403
HpyAV CCTTC 4 cut(s) 369, 1063, 1627, 2191
HpyCH4III ACNGT 2 cut(s) 48, 2269
HpyCH4IV ACGT 3 cut(s) 384, 1215, 1339
HpyF10VI GCNNNNNNNGC 3 cut(s) 1116, 1253, 2285
HpyF3I CTNAG 5 cut(s) 1585, 1711, 1772, 2014, 2049
HpySE526I ACGT 3 cut(s) 384, 1215, 1339
HspAI GCGC 2 cut(s) 546, 1858
Ksp22I TGATCA 2 cut(s) 1081, 1945
LmnI GCTCC 6 cut(s) 70, 826, 1142, 1464, 1729, 1870
Lsp1109I GCAGC 4 cut(s) 427, 862, 865, 1085
LweI GCATC 5 cut(s) 182, 427, 674, 1070, 1561
MaeI CTAG 4 cut(s) 408, 561, 1116, 1146
MaeII ACGT 3 cut(s) 384, 1215, 1339
MaeIII GTNAC 5 cut(s) 908, 917, 1042, 1873, 2165
MfeI CAATTG 5 cut(s) 388, 981, 1733, 2150, 2408
MflI RGATCY 2 cut(s) 226, 238
MhlI GDGCHC 3 cut(s) 682, 1469, 1867
MlyI GAGTC 2 cut(s) 956, 1583
MmeI TCCRAC 2 cut(s) 396, 511
MnlI CCTC 9 cut(s) 12, 78, 159, 357, 527, 1130, 1151, 1407, 1534
Mph1103I ATGCAT 2 cut(s) 175, 667
MroXI GAANNNNTTC 1 cut(s) 228
MslI CAYNNNNRTG 2 cut(s) 276, 555
MspA1I CMGCKG 1 cut(s) 1243
MspR9I CCNGG 3 cut(s) 234, 243, 1845
MunI CAATTG 5 cut(s) 388, 981, 1733, 2150, 2408
Mva1269I GAATGC 2 cut(s) 667, 1705
MvaI CCWGG 3 cut(s) 234, 243, 1845
MwoI GCNNNNNNNGC 3 cut(s) 1116, 1253, 2285
NlaIV GGNNCC 1 cut(s) 144
NmuCI GTSAC 5 cut(s) 908, 917, 1042, 1873, 2165
NsiI ATGCAT 2 cut(s) 175, 667
NspI RCATGY 4 cut(s) 602, 1043, 1297, 1992
NspV TTCGAA 1 cut(s) 250
PagI TCATGA 1 cut(s) 2370
PaqCI CACCTGC 1 cut(s) 482
PciI ACATGT 2 cut(s) 1039, 1293
PctI GAATGC 2 cut(s) 667, 1705
PdmI GAANNNNTTC 1 cut(s) 228
PfeI GAWTC 7 cut(s) 725, 1346, 1423, 1581, 1598, 1763, 2038
PflMI CCANNNNNTGG 2 cut(s) 479, 713
PfoI TCCNGGA 3 cut(s) 232, 241, 1843
PkrI GCNGC 4 cut(s) 442, 877, 880, 1075
PleI GAGTC 2 cut(s) 955, 1583
PpsI GAGTC 2 cut(s) 955, 1583
PpuMI RGGWCCY 1 cut(s) 317
PscI ACATGT 2 cut(s) 1039, 1293
PshBI ATTAAT 1 cut(s) 216
Psp124BI GAGCTC 2 cut(s) 1469, 1867
Psp5II RGGWCCY 1 cut(s) 317
Psp6I CCWGG 3 cut(s) 232, 241, 1843
PspGI CCWGG 3 cut(s) 232, 241, 1843
PspN4I GGNNCC 1 cut(s) 144
PspPI GGNCC 1 cut(s) 317
PspPPI RGGWCCY 1 cut(s) 317
PstI CTGCAG 1 cut(s) 2077
PsuI RGATCY 2 cut(s) 226, 238
PvuII CAGCTG 1 cut(s) 1243
RsaI GTAC 4 cut(s) 97, 190, 269, 1480
RsaNI GTAC 4 cut(s) 96, 189, 268, 1479
RseI CAYNNNNRTG 2 cut(s) 276, 555
SacI GAGCTC 2 cut(s) 1469, 1867
SatI GCNGC 4 cut(s) 441, 876, 879, 1074
Sau96I GGNCC 1 cut(s) 317
SchI GAGTC 2 cut(s) 956, 1583
ScrFI CCNGG 3 cut(s) 234, 243, 1845
SduI GDGCHC 3 cut(s) 682, 1469, 1867
SfaNI GCATC 5 cut(s) 182, 427, 674, 1070, 1561
SfcI CTRYAG 4 cut(s) 1257, 1554, 2073, 2268
SfuI TTCGAA 1 cut(s) 250
SinI GGWCC 1 cut(s) 317
SmiMI CAYNNNNRTG 2 cut(s) 276, 555
SspI AATATT 4 cut(s) 200, 478, 1393, 2343
SspMI CTAG 4 cut(s) 408, 561, 1116, 1146
SstI GAGCTC 2 cut(s) 1469, 1867
StyD4I CCNGG 3 cut(s) 232, 241, 1843
StyI CCWWGG 2 cut(s) 745, 2170
TaaI ACNGT 2 cut(s) 48, 2269
TaiI ACGT 3 cut(s) 387, 1218, 1342
TaqI TCGA 8 cut(s) 250, 289, 637, 1354, 1380, 1605, 1894, 2331
TfiI GAWTC 7 cut(s) 725, 1346, 1423, 1581, 1598, 1763, 2038
TscAI CASTG 3 cut(s) 1051, 1071, 2272
TseFI GTSAC 5 cut(s) 908, 917, 1042, 1873, 2165
TseI GCWGC 4 cut(s) 440, 875, 878, 1073
Tsp45I GTSAC 5 cut(s) 908, 917, 1042, 1873, 2165
TspGWI ACGGA 1 cut(s) 1112
TspRI CASTG 3 cut(s) 1051, 1071, 2272
Van91I CCANNNNNTGG 2 cut(s) 479, 713
VpaK11BI GGWCC 1 cut(s) 317
VspI ATTAAT 1 cut(s) 216
XapI RAATTY 3 cut(s) 356, 751, 1163
XceI RCATGY 4 cut(s) 602, 1043, 1297, 1992
XmnI GAANNNNTTC 1 cut(s) 228
XspI CTAG 4 cut(s) 408, 561, 1116, 1146
Zsp2I ATGCAT 2 cut(s) 175, 667
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.