RLG00000033957

Zinc finger MYM-type protein 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000122
Physical Location & Seq
Reverse (-)
34723590 .. 34726039
2450 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033957

Sequence Viewer

Length: 1785 bp
ATGGGTCCACAATCTTCGGAGCAAGTCTTGCAGGATCGTTTGGAAATTTTGTCCACAATAGAACATGTTAAATGGGTTACAGAAAAGGGATATAGATTTACGCTTGATTTCTTTCAAGGGATGGAGTTTTTTTTAACGTGGAATGGCGAACTTCCGAAATTGGCAGATGTTCCTGGAAATTCCAAGTATTCGTCACTGAAAGTTCAAAAGGAGATCTTGAATATTCTCGGCGACAAGGTGAGAAATAAGATTCGTGAAGAAGTTGGAGATTCCAAATTCTGCATTATCCTTGACGATGCTTGTGATCAATCTAAGAGGCAACTATTGGTTGTTATTCTGAGATTTGTGGACTGTCGAGGTTGTGTTCAAGAACGATTGTTTGAAGTTGTAGATGTTGATAATGACTTTACTGCCTCAGCTCTTGAAAAAGAGATATCCAATTTACTTGCTCGGAATAATCTCTGTGTTGGAAATATGCGAGGTCAAGGGTACAATGGTGCAAGGAGTATGGATGACGCATGGAATACATTACAAGCATCGTTTCTCAGAGATTCCCCATGTGCATATTATGTACATTGCTTTGCTCATGATCTACATGTAGCATTGTTCACTGCATCTTACAAAGTATTTGCTATGTACAGATTTTTTAAAGGGCTGCGCTCCATTGTCAGTTTTCTTAGTGTTTACTCCAATTGTCATTCTGATCTAAAACCAGCTGGAGATGTTGAAATTGCAGATTTGGTTGCTTTTGTAGAGCTTGAATCACAGAGTTTCCAGCGAGACCCAACTGTGAATTGGAGCTTCCATTATGGTTTGATTACTAGATTGATTAATATGTTTGATGCTACTTGCACATTCTTTGAAAACATTGAAACAAGTAGACTCAATGCAGATATACGTGGGGAAGCTTGGGGTATTTATAAGGTGGTAGCGTCCTTCAAATTTGTATTTAGTTTGCTGCTTTTTAAAGAAATTATGGAAATCACTGGTGAAGTTTGTCATGCGGTGCAACAGAAATCTCAGCCCATCTTGAATGCTTTTGATTTGGTCTCAAGTACAAAAACTATTCTTCAGAAGTTTCAACAAGATGGTTGGGATAATTTCATTGGAAGAGTGGTATCATTTTGTGAAAGAAATCAAATAAATATTCCTGATATGGGTGCTCATCATAAGGTGCACAAACATCGTTCTCCTCAGCAAGAATTTATTACGGTTAAGCATCATTACCACATTGATAGATTCAATGCGGTAATAGATTTACAGTTGAAGGAGTTAAACAGTAAGTTTCCACAGCAAACAATGGAACTTTTTATTCTTAGCACAGCTTTAGATCCTACTGATGCATTTAAATCATTTAAAATTGATGATATTTGCAATCTTGCTGGGAAGTTCTATCCTCAAGATTTCACTCAAGATGAGATGCATGCGTTGAGACTACAATTGAAAAACTATGAGCTTGAAGTTCTTTGTGATCCACAGTTTCAGAATATGTCTTCTCTATCTGAACTTTGTCAAGGATTAATTGAAACAGGAAAGTCAGCCTTGTATTTCTTAATCGACAGATTGATTCGTCTAGTGTTGACTCTTCCAGTTCATACGGCAATGACTGAACGAGCATTTTCAGCAATGGGACCTATCAATGAACTCTGCAACAAGATAGAAGACGAGTTTCTCCCAAATTATTTGGTTGTCCACATTGAGAGAGATCACGCTGAAAGTATTGATTCAGATTCAGTAATAGATGATCTTTATTCTGTGAATCATGCGAGGGCACTACTTCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

595

Amino Acids

68.17

Weight (kDa)

5.43

Isoelectric Point (pI)

45.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 54 - 175 7e-18 Domain of unknown function (DUF4371)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19260 AT1G41920 AT1G42710 AT2G06541 AT2G06541 AT3G29450 AT3G29763 AT3G29765 AT3G31402 AT3G31402 AT4G09660
fragaria_vesca FvH4_1g22711 FvH4_3g10612 FvH4_3g23261 FvH4_3g31623 FvH4_3g33391 FvH4_3g37321 FvH4_3g43192 FvH4_3g43193 FvH4_4g00181 FvH4_4g00251 FvH4_4g08751 FvH4_4g15271 FvH4_5g27190 FvH4_6g02122 FvH4_6g26880 FvH4_6g35121 FvH4_7g16871 FvH4_7g19080 FvH4_7g30071
malus_domestica MD02G1162100.v1.1 MD03G1081700.v1.1 MD09G1280500.v1.1 MD12G1083800.v1.1 MD12G1128200.v1.1
prunus_persica Prupe.7G129800_v2.0.a1
pyrus_communis pycom01g08000 pycom02g13840 pycom02g18030 pycom04g01290 pycom04g12580 pycom05g02550 pycom05g06740 pycom05g26200 pycom07g09850 pycom08g10610 pycom10g11280 pycom11g12580 pycom11g22260 pycom12g18440 pycom13g20080 pycom15g25600 pycom16g23600 pycom17g10070
rosa_chinensis RchiOBHm_Chr1g0313551 RchiOBHm_Chr1g0364331 RchiOBHm_Chr1g0369741 RchiOBHm_Chr1g0380371 RchiOBHm_Chr2g0097391 RchiOBHm_Chr2g0113561 RchiOBHm_Chr2g0114151 RchiOBHm_Chr2g0119761 RchiOBHm_Chr2g0149851 RchiOBHm_Chr2g0151931 RchiOBHm_Chr2g0166411 RchiOBHm_Chr3g0453661 RchiOBHm_Chr3g0466101 RchiOBHm_Chr3g0477911 RchiOBHm_Chr3g0486441 RchiOBHm_Chr4g0390161 RchiOBHm_Chr4g0392191 RchiOBHm_Chr4g0414461 RchiOBHm_Chr4g0421421 RchiOBHm_Chr5g0023801 RchiOBHm_Chr5g0040121 RchiOBHm_Chr5g0045381 RchiOBHm_Chr5g0061511 RchiOBHm_Chr5g0062621 RchiOBHm_Chr5g0064161 RchiOBHm_Chr5g0068711 RchiOBHm_Chr6g0246041 RchiOBHm_Chr6g0252511 RchiOBHm_Chr6g0252521 RchiOBHm_Chr6g0263361 RchiOBHm_Chr6g0269451 RchiOBHm_Chr6g0275351 RchiOBHm_Chr6g0288481 RchiOBHm_Chr6g0310011 RchiOBHm_Chr6g0310021 RchiOBHm_Chr7g0223071 RchiOBHm_Chr7g0227621 RchiOBHm_Chr7g0242581
rosa_laevigata RLG00000033957
rosa_multiflora Rmu_co8455865.1_g000001 Rmu_sc0000021.1_g000011 Rmu_sc0000079.1_g000049 Rmu_sc0000087.1_g000015 Rmu_sc0000151.1_g000008 Rmu_sc0000365.1_g000014 Rmu_sc0000446.1_g000054 Rmu_sc0000446.1_g000055 Rmu_sc0000534.1_g000006 Rmu_sc0000724.1_g000020 Rmu_sc0000859.1_g000001 Rmu_sc0000876.1_g000002 Rmu_sc0000881.1_g000005 Rmu_sc0000929.1_g000014 Rmu_sc0001112.1_g000004 Rmu_sc0001136.1_g000009 Rmu_sc0001353.1_g000064 Rmu_sc0001662.1_g000005 Rmu_sc0001764.1_g000006 Rmu_sc0001982.1_g000015 Rmu_sc0002052.1_g000008 Rmu_sc0002052.1_g000009 Rmu_sc0002158.1_g000011 Rmu_sc0002285.1_g000005 Rmu_sc0002983.1_g000025 Rmu_sc0003063.1_g000006 Rmu_sc0003076.1_g000005 Rmu_sc0003221.1_g000053 Rmu_sc0003382.1_g000010 Rmu_sc0003733.1_g000054 Rmu_sc0003997.1_g000005 Rmu_sc0004283.1_g000008 Rmu_sc0004283.1_g000053 Rmu_sc0004509.1_g000007 Rmu_sc0004540.1_g000028 Rmu_sc0004657.1_g000005 Rmu_sc0004935.1_g000006 Rmu_sc0005072.1_g000003 Rmu_sc0005248.1_g000001 Rmu_sc0006161.1_g000001 Rmu_sc0006209.1_g000005 Rmu_sc0006576.1_g000018 Rmu_sc0006576.1_g000019 Rmu_sc0007121.1_g000016 Rmu_sc0007121.1_g000032 Rmu_sc0007753.1_g000016 Rmu_sc0007795.1_g000009 Rmu_sc0007841.1_g000019 Rmu_sc0008339.1_g000021 Rmu_sc0008339.1_g000022 Rmu_sc0008432.1_g000001 Rmu_sc0008633.1_g000009 Rmu_sc0009104.1_g000013 Rmu_sc0011469.1_g000001 Rmu_sc0012039.1_g000001 Rmu_sc0013947.1_g000007 Rmu_sc0015560.1_g000001 Rmu_sc0017369.1_g000001 Rmu_sc0021648.1_g000001 Rmu_sc0022867.1_g000003 Rmu_sc0027801.1_g000001 Rmu_sc0027801.1_g000002 Rmu_sc0029861.1_g000001 Rmu_sc0030314.1_g000001 Rmu_sc0040149.1_g000001 Rmu_ssc0000089.1_g000028 Rmu_ssc0000480.1_g000033
rosa_roxburghii Rroxscaffold_1G00002540 Rroxscaffold_1G00013960 Rroxscaffold_1G00041160 Rroxscaffold_1G00045580 Rroxscaffold_3G00247310 Rroxscaffold_3G00267070 Rroxscaffold_4G00313830 Rroxscaffold_5G00372270 Rroxscaffold_6G00404800 Rroxscaffold_6G00406090
rosa_rugosa Rorug03G0269800 Rorug04G0142900 Rorug04G0152600 Rorug05G0223300.1 Rorug05G0266400 Rorug06G0008900 Rorug07G0086000 Rorug07G0205800 Rorug07G0270900
rosa_wichuraiana Rw0G001600 Rw0G017220 Rw0G017620 Rw0G018380 Rw1G002320 Rw1G020940 Rw1G021200 Rw1G022610 Rw1G038680 Rw2G013320 Rw2G016850 Rw2G024020 Rw2G025210 Rw2G032270 Rw2G039490 Rw2G041630 Rw2G048450 Rw2G051510 Rw3G025320 Rw4G003260 Rw4G007300 Rw4G009290 Rw4G010910 Rw4G013260 Rw5G008190 Rw5G008290 Rw5G018740 Rw5G023640 Rw5G028800 Rw5G031830 Rw5G041280 Rw5G044050 Rw6G007060 Rw6G008230 Rw6G009960 Rw6G013460 Rw6G014610 Rw6G017780 Rw6G033200 Rw7G021340 Rw7G023750 Rw7G032290 Rw7G032450 Rw7G033880 Rw7G038580 Rw7G040180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 921
AccI GTMKAC 1 cut(s) 880
AciI CCGC 2 cut(s) 1004, 1247
AclWI GGATC 3 cut(s) 42, 1325, 1466
AcsI RAATTY 5 cut(s) 45, 178, 275, 941, 1202
AcuI CTGAAG 1 cut(s) 1055
AfaI GTAC 4 cut(s) 491, 573, 638, 1057
AfiI CCNNNNNNNGG 1 cut(s) 1157
AflIII ACRYGT 2 cut(s) 64, 595
AjnI CCWGG 1 cut(s) 172
AluBI AGCT 7 cut(s) 419, 716, 757, 801, 908, 1325, 1456
AluI AGCT 7 cut(s) 419, 716, 757, 801, 908, 1325, 1456
Alw21I GWGCWC 2 cut(s) 1165, 1179
Alw26I GTCTC 3 cut(s) 774, 1054, 1426
Alw44I GTGCAC 1 cut(s) 1175
AlwI GGATC 3 cut(s) 42, 1325, 1466
ApaLI GTGCAC 1 cut(s) 1175
ApeKI GCWGC 2 cut(s) 655, 958
ApoI RAATTY 5 cut(s) 45, 178, 275, 941, 1202
AseI ATTAAT 2 cut(s) 831, 1520
AspLEI GCGC 1 cut(s) 660
AspS9I GGNCC 2 cut(s) 5, 1631
AsuHPI GGTGA 2 cut(s) 250, 1001
AvaII GGWCC 2 cut(s) 5, 1631
BaeGI GKGCMC 2 cut(s) 1179, 1774
BaeI ACNNNNGTAYC 2 cut(s) 481, 514
BbsI GAAGAC 2 cut(s) 1485, 1668
Bbv12I GWGCWC 2 cut(s) 1165, 1179
BbvCI CCTCAGC 2 cut(s) 415, 1194
BbvI GCAGC 2 cut(s) 642, 945
BccI CCATC 3 cut(s) 115, 1034, 1082
BceAI ACGGC 1 cut(s) 1614
BcgI CGANNNNNNTGC 2 cut(s) 1166, 1200
BciT130I CCWGG 1 cut(s) 174
BclI TGATCA 1 cut(s) 304
BcoDI GTCTC 3 cut(s) 774, 1054, 1426
BfaI CTAG 2 cut(s) 822, 1574
BglII AGATCT 1 cut(s) 213
BisI GCNGC 2 cut(s) 656, 959
BlsI GCNGC 2 cut(s) 657, 960
Bme1390I CCNGG 1 cut(s) 174
Bme18I GGWCC 2 cut(s) 5, 1631
BmgT120I GGNCC 2 cut(s) 5, 1631
BmiI GGNNCC 2 cut(s) 6, 1632
BmrFI CCNGG 1 cut(s) 174
BmsI GCATC 7 cut(s) 286, 545, 623, 832, 1228, 1330, 1410
BpiI GAAGAC 2 cut(s) 1485, 1668
BpmI CTGGAG 1 cut(s) 738
Bpu10I CCTNAGC 2 cut(s) 415, 1194
BpuEI CTTGAG 3 cut(s) 1036, 1383, 1395
BsaAI YACGTR 1 cut(s) 899
BsaI GGTCTC 2 cut(s) 774, 1054
Bsc4I CCNNNNNNNGG 1 cut(s) 1157
Bse1I ACTGG 2 cut(s) 991, 1589
Bse3DI GCAATG 3 cut(s) 574, 1608, 1632
BseBI CCWGG 1 cut(s) 174
BseGI GGATG 2 cut(s) 126, 517
BseLI CCNNNNNNNGG 1 cut(s) 1157
BseMI GCAATG 3 cut(s) 574, 1608, 1632
BseMII CTCAG 5 cut(s) 329, 429, 559, 1034, 1208
BseNI ACTGG 2 cut(s) 991, 1589
BseRI GAGGAG 1 cut(s) 1182
BseSI GKGCMC 2 cut(s) 1179, 1774
BseXI GCAGC 2 cut(s) 642, 945
BseYI CCCAGC 1 cut(s) 1382
BsiHKAI GWGCWC 2 cut(s) 1165, 1179
BslFI GGGAC 1 cut(s) 1644
BslI CCNNNNNNNGG 1 cut(s) 1157
BsmAI GTCTC 3 cut(s) 774, 1054, 1426
BsmFI GGGAC 1 cut(s) 1644
BsmI GAATGC 1 cut(s) 1039
Bso31I GGTCTC 2 cut(s) 774, 1054
Bsp1286I GDGCHC 3 cut(s) 1165, 1179, 1774
Bsp1407I TGTACA 2 cut(s) 571, 636
Bsp143I GATC 9 cut(s) 34, 213, 304, 589, 703, 1330, 1471, 1705, 1744
BspACI CCGC 2 cut(s) 1004, 1247
BspCNI CTCAG 5 cut(s) 330, 428, 558, 1033, 1207
BspHI TCATGA 1 cut(s) 586
BspLI GGNNCC 2 cut(s) 6, 1632
BspPI GGATC 3 cut(s) 42, 1325, 1466
BspTNI GGTCTC 2 cut(s) 774, 1054
BsrDI GCAATG 3 cut(s) 574, 1608, 1632
BsrGI TGTACA 2 cut(s) 571, 636
BsrI ACTGG 2 cut(s) 991, 1589
BssMI GATC 9 cut(s) 34, 213, 304, 589, 703, 1330, 1471, 1705, 1744
Bst2UI CCWGG 1 cut(s) 174
Bst4CI ACNGT 6 cut(s) 353, 790, 1213, 1263, 1280, 1479
Bst6I CTCTTC 2 cut(s) 1105, 1590
BstAPI GCANNNNNTGC 1 cut(s) 28
BstAUI TGTACA 2 cut(s) 571, 636
BstBAI YACGTR 1 cut(s) 899
BstC8I GCNNGC 1 cut(s) 1425
BstDEI CTNAG 8 cut(s) 312, 338, 415, 545, 677, 1020, 1194, 1316
BstF5I GGATG 2 cut(s) 126, 517
BstHHI GCGC 1 cut(s) 660
BstKTI GATC 9 cut(s) 37, 216, 307, 592, 706, 1333, 1474, 1708, 1747
BstMAI GTCTC 3 cut(s) 774, 1054, 1426
BstMBI GATC 9 cut(s) 34, 213, 304, 589, 703, 1330, 1471, 1705, 1744
BstMWI GCNNNNNNNGC 2 cut(s) 28, 1622
BstNI CCWGG 1 cut(s) 174
BstNSI RCATGY 3 cut(s) 68, 599, 1427
BstSCI CCNGG 1 cut(s) 172
BstSLI GKGCMC 2 cut(s) 1179, 1774
BstV1I GCAGC 2 cut(s) 642, 945
BstV2I GAAGAC 2 cut(s) 1485, 1668
BstX2I RGATCY 2 cut(s) 213, 1330
BstYI RGATCY 2 cut(s) 213, 1330
BtsCI GGATG 2 cut(s) 126, 517
BtsI GCAGTG 1 cut(s) 609
BtsIMutI CAGTG 3 cut(s) 194, 609, 984
Cac8I GCNNGC 1 cut(s) 1425
CciI TCATGA 1 cut(s) 586
CfoI GCGC 1 cut(s) 660
Cfr13I GGNCC 2 cut(s) 5, 1631
CseI GACGC 2 cut(s) 524, 921
Csp6I GTAC 4 cut(s) 490, 572, 637, 1056
CviAII CATG 8 cut(s) 65, 519, 558, 587, 596, 1001, 1424, 1763
CviQI GTAC 4 cut(s) 490, 572, 637, 1056
DdeI CTNAG 8 cut(s) 312, 338, 415, 545, 677, 1020, 1194, 1316
DpnI GATC 9 cut(s) 36, 215, 306, 591, 705, 1332, 1473, 1707, 1746
DpnII GATC 9 cut(s) 34, 213, 304, 589, 703, 1330, 1471, 1705, 1744
DraI TTTAAA 4 cut(s) 649, 967, 1348, 1357
Eam1104I CTCTTC 2 cut(s) 1105, 1590
EarI CTCTTC 2 cut(s) 1105, 1590
Eco31I GGTCTC 2 cut(s) 774, 1054
Eco32I GATATC 1 cut(s) 435
Eco47I GGWCC 2 cut(s) 5, 1631
Eco57I CTGAAG 1 cut(s) 1055
EcoO109I RGGNCCY 1 cut(s) 1631
EcoRII CCWGG 1 cut(s) 172
EcoRV GATATC 1 cut(s) 435
EcoT22I ATGCAT 2 cut(s) 1345, 1425
FaeI CATG 8 cut(s) 68, 522, 561, 590, 599, 1004, 1427, 1766
FalI AAGNNNNNCTT 4 cut(s) 200, 232, 1526, 1558
FaqI GGGAC 1 cut(s) 1644
FatI CATG 8 cut(s) 64, 518, 557, 586, 595, 1000, 1423, 1762
FbaI TGATCA 1 cut(s) 304
FblI GTMKAC 1 cut(s) 880
Fnu4HI GCNGC 2 cut(s) 656, 959
FokI GGATG 2 cut(s) 133, 524
Fsp4HI GCNGC 2 cut(s) 656, 959
FspBI CTAG 2 cut(s) 822, 1574
GlaI GCGC 1 cut(s) 659
GluI GCNGC 2 cut(s) 656, 959
GsaI CCCAGC 1 cut(s) 1386
GsuI CTGGAG 1 cut(s) 738
HgaI GACGC 2 cut(s) 524, 921
HhaI GCGC 1 cut(s) 660
Hin1II CATG 8 cut(s) 68, 522, 561, 590, 599, 1004, 1427, 1766
Hin6I GCGC 1 cut(s) 658
HinP1I GCGC 1 cut(s) 658
HincII GTYRAC 1 cut(s) 1581
HindII GTYRAC 1 cut(s) 1581
HindIII AAGCTT 1 cut(s) 906
HphI GGTGA 2 cut(s) 250, 1001
Hpy166II GTNNAC 9 cut(s) 8, 54, 349, 609, 685, 881, 1177, 1581, 1693
Hpy188III TCNNGA 9 cut(s) 217, 254, 368, 422, 587, 1030, 1151, 1400, 1412
Hpy8I GTNNAC 9 cut(s) 8, 54, 349, 609, 685, 881, 1177, 1581, 1693
HpyAV CCTTC 2 cut(s) 946, 1261
HpyCH4III ACNGT 6 cut(s) 353, 790, 1213, 1263, 1280, 1479
HpyCH4IV ACGT 2 cut(s) 137, 898
HpyF10VI GCNNNNNNNGC 2 cut(s) 28, 1622
HpyF3I CTNAG 8 cut(s) 312, 338, 415, 545, 677, 1020, 1194, 1316
HpySE526I ACGT 2 cut(s) 137, 898
Hsp92II CATG 8 cut(s) 68, 522, 561, 590, 599, 1004, 1427, 1766
HspAI GCGC 1 cut(s) 658
Ksp22I TGATCA 1 cut(s) 304
Kzo9I GATC 9 cut(s) 34, 213, 304, 589, 703, 1330, 1471, 1705, 1744
LmnI GCTCC 3 cut(s) 19, 665, 798
Lsp1109I GCAGC 2 cut(s) 642, 945
LweI GCATC 7 cut(s) 286, 545, 623, 832, 1228, 1330, 1410
MaeI CTAG 2 cut(s) 822, 1574
MaeII ACGT 2 cut(s) 137, 898
MaeIII GTNAC 2 cut(s) 76, 192
MalI GATC 9 cut(s) 36, 215, 306, 591, 705, 1332, 1473, 1707, 1746
MboI GATC 9 cut(s) 34, 213, 304, 589, 703, 1330, 1471, 1705, 1744
MboII GAAGA 7 cut(s) 6, 269, 1061, 1122, 1485, 1577, 1673
MfeI CAATTG 2 cut(s) 691, 1439
MflI RGATCY 2 cut(s) 213, 1330
MhlI GDGCHC 3 cut(s) 1165, 1179, 1774
MlyI GAGTC 2 cut(s) 876, 1576
MmeI TCCRAC 2 cut(s) 244, 448
MnlI CCTC 7 cut(s) 309, 350, 424, 473, 1203, 1407, 1761
Mph1103I ATGCAT 2 cut(s) 1345, 1425
MspA1I CMGCKG 1 cut(s) 716
MspR9I CCNGG 1 cut(s) 174
MunI CAATTG 2 cut(s) 691, 1439
Mva1269I GAATGC 1 cut(s) 1039
MvaI CCWGG 1 cut(s) 174
MwoI GCNNNNNNNGC 2 cut(s) 28, 1622
NdeII GATC 9 cut(s) 34, 213, 304, 589, 703, 1330, 1471, 1705, 1744
NlaIII CATG 8 cut(s) 68, 522, 561, 590, 599, 1004, 1427, 1766
NlaIV GGNNCC 2 cut(s) 6, 1632
NmeAIII GCCGAG 1 cut(s) 207
NmuCI GTSAC 1 cut(s) 192
NsiI ATGCAT 2 cut(s) 1345, 1425
NspI RCATGY 3 cut(s) 68, 599, 1427
PaeI GCATGC 1 cut(s) 1427
PagI TCATGA 1 cut(s) 586
PciI ACATGT 2 cut(s) 64, 595
PctI GAATGC 1 cut(s) 1039
PfeI GAWTC 9 cut(s) 250, 269, 551, 761, 1239, 1567, 1724, 1730, 1759
PfoI TCCNGGA 1 cut(s) 172
PkrI GCNGC 2 cut(s) 657, 960
PleI GAGTC 2 cut(s) 876, 1576
PpsI GAGTC 2 cut(s) 876, 1576
Ppu21I YACGTR 1 cut(s) 899
PpuMI RGGWCCY 1 cut(s) 1631
PscI ACATGT 2 cut(s) 64, 595
PshBI ATTAAT 2 cut(s) 831, 1520
PsiI TTATAA 1 cut(s) 921
Psp5II RGGWCCY 1 cut(s) 1631
Psp6I CCWGG 1 cut(s) 172
PspFI CCCAGC 1 cut(s) 1382
PspGI CCWGG 1 cut(s) 172
PspN4I GGNNCC 2 cut(s) 6, 1632
PspPI GGNCC 2 cut(s) 5, 1631
PspPPI RGGWCCY 1 cut(s) 1631
PsuI RGATCY 2 cut(s) 213, 1330
PvuII CAGCTG 1 cut(s) 716
RsaI GTAC 4 cut(s) 491, 573, 638, 1057
RsaNI GTAC 4 cut(s) 490, 572, 637, 1056
SatI GCNGC 2 cut(s) 656, 959
Sau3AI GATC 9 cut(s) 34, 213, 304, 589, 703, 1330, 1471, 1705, 1744
Sau96I GGNCC 2 cut(s) 5, 1631
SchI GAGTC 2 cut(s) 876, 1576
ScrFI CCNGG 1 cut(s) 174
SduI GDGCHC 3 cut(s) 1165, 1179, 1774
SfaNI GCATC 7 cut(s) 286, 545, 623, 832, 1228, 1330, 1410
SinI GGWCC 2 cut(s) 5, 1631
SmiI ATTTAAAT 1 cut(s) 1348
SmlI CTYRAG 3 cut(s) 1051, 1398, 1410
SmoI CTYRAG 3 cut(s) 1051, 1398, 1410
SphI GCATGC 1 cut(s) 1427
SsiI CCGC 2 cut(s) 1004, 1247
SspI AATATT 2 cut(s) 223, 1147
SspMI CTAG 2 cut(s) 822, 1574
StyD4I CCNGG 1 cut(s) 172
SwaI ATTTAAAT 1 cut(s) 1348
TaaI ACNGT 6 cut(s) 353, 790, 1213, 1263, 1280, 1479
TaiI ACGT 2 cut(s) 140, 901
TaqI TCGA 2 cut(s) 355, 1557
TatI WGTACW 3 cut(s) 571, 636, 1055
TfiI GAWTC 9 cut(s) 250, 269, 551, 761, 1239, 1567, 1724, 1730, 1759
TscAI CASTG 3 cut(s) 201, 616, 991
TseFI GTSAC 1 cut(s) 192
TseI GCWGC 2 cut(s) 655, 958
Tsp45I GTSAC 1 cut(s) 192
TspDTI ATGAA 3 cut(s) 1093, 1583, 1656
TspRI CASTG 3 cut(s) 201, 616, 991
VneI GTGCAC 1 cut(s) 1175
VpaK11BI GGWCC 2 cut(s) 5, 1631
VspI ATTAAT 2 cut(s) 831, 1520
XapI RAATTY 5 cut(s) 45, 178, 275, 941, 1202
XceI RCATGY 3 cut(s) 68, 599, 1427
XcmI CCANNNNNNNNNTGG 1 cut(s) 792
XmiI GTMKAC 1 cut(s) 880
XspI CTAG 2 cut(s) 822, 1574
Zsp2I ATGCAT 2 cut(s) 1345, 1425
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.