FvH4_4g08751

Zinc finger MYM-type protein 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000122
Physical Location & Seq
Forward (+)
9349221 .. 9351704
2484 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g08751.t1

Sequence Viewer

Length: 1884 bp
ATGAAAGCTTTTCTCGAGAGATATAATAAAAGAAAAGCGGCGGATCAGTTGACACCATCTCAAGCTCCTCAAATAAGAAATAGATCCAATGAAAGTACTTCGGAACATCATCCTCATCCTAAAGAGTTGAACTTGACAAATCAATCAACACCAGCTCAAGCCCATCAACCAAGTAATGCATCTGAAGATATTGGTACATCAAAACATTCTGTCAATGAGTTTAACATAGAAGACCTTCCAGGAGATCCGGGACTTCGAAGACCAATTTTAGAATATCATCCTAATGTTCGAGATCGAGTGCGAAGACATTATTTGATGCAAGGTCCTTGTCAACCAAAAAACTATGTATTTCCTAAAACGATTTTCAGCGGTGTTAACCGAAAGTTCAAAGAGACATGGTTCAAGGATTATCCCAGTTGGCTAGAGTATAGTATAGAAAAAGATGTTGCATATTGTTTGCATTGTTATCTTTTTAAACCAGATACTGGAGACCAAGCAGGCGGTGATGTATTTGTTGTTGATTGTGCTCGGTTTCTTCTACGACAAGGGTTGCCTTTTCGTGGTCATGATGAATCTGATAGTTCAAAGAACCAAGGGCACTTTAGAGAGCTTTTGAAGTGGCATTCTGATAAAGTTGAAGATATAAAAAAGGTTGTCTTGAAAAATGCCCCAAGAAATCATCAATTGACATCACCGGATATTCAACATGATATTGTCAAGGCGGCTGCGACTGAAACTCTCAATATCATACTTACACAAATTGGTGATGCATTATTCTCTGTTCTCGTTGACGAGTCTCGTGATGTGTCAGGAAAAGAGCAAATGGCTATCGTCTTGCGTCTGGTAAATGTCGCTGGAGGTTCATGCAAACGTCGTGATTCTCTTCGAGAAAAGCAAGTGGCCAAGATCATTGAAGAACTGAATGTTGGTGCTATTTCAAGCGGGAAGGGGTTGAATCAACAAACCACTCTAAAACGAGCTGGTGATACAAGATGGAGCTCTCATTATGGTACTTTGGTAAGTATTATCACTTTATTTCCATCTTTAGTTGAATTGCTTGAAGAGATAAAAGAGGATGGATTGTCCAGTGATCATAAACAAGATGCAAGCAGGCTATTAGACTCATTAGAATCATTTGACTTTGTATTTAGTCTTCATTTGATGAAGGTTTTGCTGGGAATTACAAATCTTTTGTCACAGGCATTGCAAAGAAGAGACCAAGATATTGTGAATGCAATGAAGTTGGTTAAAGTGTGTAAGGAGCAATTGCAAGACATGAGAGACAATGGATGGGATTCACTTCTAGGTCAAGTTGTTTCATTTTGTGAGAAATATGAGATTGATGTTCCTAATATGGATGATGTTCCTATTATTCCAGGAAAATCACGACGCAGAGCTCCAAAGGTCACTAATATGCATAGGTATCGGGTTGAATTGTTTTCTACAGTCATAGATATGCTACTTCAAGAGCTAAATGACCATTTTACAGAAACAACTACTGAGCTACTTCTCTTATCTCTCTTGGCTCTTGAAGATGAATTGGACACTTACATATTTGATATGCAAAGCAATGATCTGTTTAAAGAACTGAAAGGAATTAGTGAGCTTGGAGAAAAAATGGTTGAGACACAGAAAGACCAGGTCTATCTGTTAGTTTACTTGCTCATAACATTGGCACTGATTCTTCCAGTTGCAACTGCCACTGTAGAAAGAGCATTTTCTGCCATGAAGATTATAAAAAGTGATTTGCGAAACCGAATGGGAGACATGTTGATGAACGACAACATGATTACATATATCGAGAAAGATATATTTGATTGTGTTGATAATGAGACCATTATGAAAATATTTCAAAATATGAGCAATCGTCATGGACAATTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

628

Amino Acids

71.62

Weight (kDa)

5.99

Isoelectric Point (pI)

44.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 173 - 287 1.4e-35 Domain of unknown function (DUF4371)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19260 AT1G41920 AT1G42710 AT2G06541 AT2G06541 AT3G29450 AT3G29763 AT3G29765 AT3G31402 AT3G31402 AT4G09660
fragaria_vesca FvH4_1g22711 FvH4_3g10612 FvH4_3g23261 FvH4_3g31623 FvH4_3g33391 FvH4_3g37321 FvH4_3g43192 FvH4_3g43193 FvH4_4g00181 FvH4_4g00251 FvH4_4g08751 FvH4_4g15271 FvH4_5g27190 FvH4_6g02122 FvH4_6g26880 FvH4_6g35121 FvH4_7g16871 FvH4_7g19080 FvH4_7g30071
malus_domestica MD02G1162100.v1.1 MD03G1081700.v1.1 MD09G1280500.v1.1 MD12G1083800.v1.1 MD12G1128200.v1.1
prunus_persica Prupe.7G129800_v2.0.a1
pyrus_communis pycom01g08000 pycom02g13840 pycom02g18030 pycom04g01290 pycom04g12580 pycom05g02550 pycom05g06740 pycom05g26200 pycom07g09850 pycom08g10610 pycom10g11280 pycom11g12580 pycom11g22260 pycom12g18440 pycom13g20080 pycom15g25600 pycom16g23600 pycom17g10070
rosa_chinensis RchiOBHm_Chr1g0313551 RchiOBHm_Chr1g0364331 RchiOBHm_Chr1g0369741 RchiOBHm_Chr1g0380371 RchiOBHm_Chr2g0097391 RchiOBHm_Chr2g0113561 RchiOBHm_Chr2g0114151 RchiOBHm_Chr2g0119761 RchiOBHm_Chr2g0149851 RchiOBHm_Chr2g0151931 RchiOBHm_Chr2g0166411 RchiOBHm_Chr3g0453661 RchiOBHm_Chr3g0466101 RchiOBHm_Chr3g0477911 RchiOBHm_Chr3g0486441 RchiOBHm_Chr4g0390161 RchiOBHm_Chr4g0392191 RchiOBHm_Chr4g0414461 RchiOBHm_Chr4g0421421 RchiOBHm_Chr5g0023801 RchiOBHm_Chr5g0040121 RchiOBHm_Chr5g0045381 RchiOBHm_Chr5g0061511 RchiOBHm_Chr5g0062621 RchiOBHm_Chr5g0064161 RchiOBHm_Chr5g0068711 RchiOBHm_Chr6g0246041 RchiOBHm_Chr6g0252511 RchiOBHm_Chr6g0252521 RchiOBHm_Chr6g0263361 RchiOBHm_Chr6g0269451 RchiOBHm_Chr6g0275351 RchiOBHm_Chr6g0288481 RchiOBHm_Chr6g0310011 RchiOBHm_Chr6g0310021 RchiOBHm_Chr7g0223071 RchiOBHm_Chr7g0227621 RchiOBHm_Chr7g0242581
rosa_laevigata RLG00000033957
rosa_multiflora Rmu_co8455865.1_g000001 Rmu_sc0000021.1_g000011 Rmu_sc0000079.1_g000049 Rmu_sc0000087.1_g000015 Rmu_sc0000151.1_g000008 Rmu_sc0000365.1_g000014 Rmu_sc0000446.1_g000054 Rmu_sc0000446.1_g000055 Rmu_sc0000534.1_g000006 Rmu_sc0000724.1_g000020 Rmu_sc0000859.1_g000001 Rmu_sc0000876.1_g000002 Rmu_sc0000881.1_g000005 Rmu_sc0000929.1_g000014 Rmu_sc0001112.1_g000004 Rmu_sc0001136.1_g000009 Rmu_sc0001353.1_g000064 Rmu_sc0001662.1_g000005 Rmu_sc0001764.1_g000006 Rmu_sc0001982.1_g000015 Rmu_sc0002052.1_g000008 Rmu_sc0002052.1_g000009 Rmu_sc0002158.1_g000011 Rmu_sc0002285.1_g000005 Rmu_sc0002983.1_g000025 Rmu_sc0003063.1_g000006 Rmu_sc0003076.1_g000005 Rmu_sc0003221.1_g000053 Rmu_sc0003382.1_g000010 Rmu_sc0003733.1_g000054 Rmu_sc0003997.1_g000005 Rmu_sc0004283.1_g000008 Rmu_sc0004283.1_g000053 Rmu_sc0004509.1_g000007 Rmu_sc0004540.1_g000028 Rmu_sc0004657.1_g000005 Rmu_sc0004935.1_g000006 Rmu_sc0005072.1_g000003 Rmu_sc0005248.1_g000001 Rmu_sc0006161.1_g000001 Rmu_sc0006209.1_g000005 Rmu_sc0006576.1_g000018 Rmu_sc0006576.1_g000019 Rmu_sc0007121.1_g000016 Rmu_sc0007121.1_g000032 Rmu_sc0007753.1_g000016 Rmu_sc0007795.1_g000009 Rmu_sc0007841.1_g000019 Rmu_sc0008339.1_g000021 Rmu_sc0008339.1_g000022 Rmu_sc0008432.1_g000001 Rmu_sc0008633.1_g000009 Rmu_sc0009104.1_g000013 Rmu_sc0011469.1_g000001 Rmu_sc0012039.1_g000001 Rmu_sc0013947.1_g000007 Rmu_sc0015560.1_g000001 Rmu_sc0017369.1_g000001 Rmu_sc0021648.1_g000001 Rmu_sc0022867.1_g000003 Rmu_sc0027801.1_g000001 Rmu_sc0027801.1_g000002 Rmu_sc0029861.1_g000001 Rmu_sc0030314.1_g000001 Rmu_sc0040149.1_g000001 Rmu_ssc0000089.1_g000028 Rmu_ssc0000480.1_g000033
rosa_roxburghii Rroxscaffold_1G00002540 Rroxscaffold_1G00013960 Rroxscaffold_1G00041160 Rroxscaffold_1G00045580 Rroxscaffold_3G00247310 Rroxscaffold_3G00267070 Rroxscaffold_4G00313830 Rroxscaffold_5G00372270 Rroxscaffold_6G00404800 Rroxscaffold_6G00406090
rosa_rugosa Rorug03G0269800 Rorug04G0142900 Rorug04G0152600 Rorug05G0223300.1 Rorug05G0266400 Rorug06G0008900 Rorug07G0086000 Rorug07G0205800 Rorug07G0270900
rosa_wichuraiana Rw0G001600 Rw0G017220 Rw0G017620 Rw0G018380 Rw1G002320 Rw1G020940 Rw1G021200 Rw1G022610 Rw1G038680 Rw2G013320 Rw2G016850 Rw2G024020 Rw2G025210 Rw2G032270 Rw2G039490 Rw2G041630 Rw2G048450 Rw2G051510 Rw3G025320 Rw4G003260 Rw4G007300 Rw4G009290 Rw4G010910 Rw4G013260 Rw5G008190 Rw5G008290 Rw5G018740 Rw5G023640 Rw5G028800 Rw5G031830 Rw5G041280 Rw5G044050 Rw6G007060 Rw6G008230 Rw6G009960 Rw6G013460 Rw6G014610 Rw6G017780 Rw6G033200 Rw7G021340 Rw7G023750 Rw7G032290 Rw7G032450 Rw7G033880 Rw7G038580 Rw7G040180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1736, 1882
AccB7I CCANNNNNTGG 1 cut(s) 485
AciI CCGC 6 cut(s) 38, 41, 369, 501, 722, 942
AclWI GGATC 3 cut(s) 51, 78, 239
AcoI YGGCCR 1 cut(s) 900
AcuI CTGAAG 1 cut(s) 204
AfaI GTAC 3 cut(s) 97, 196, 1012
AfiI CCNNNNNNNGG 2 cut(s) 485, 560
AflIII ACRYGT 1 cut(s) 1767
AjnI CCWGG 3 cut(s) 238, 1375, 1638
AjuI GAANNNNNNNTTGG 2 cut(s) 909, 941
Alw21I GWGCWC 3 cut(s) 529, 1001, 1399
Alw26I GTCTC 8 cut(s) 386, 483, 801, 1209, 1275, 1619, 1758, 1826
AlwI GGATC 3 cut(s) 51, 78, 239
AlwNI CAGNNNCTG 1 cut(s) 485
Ama87I CYCGRG 1 cut(s) 14
AoxI GGCC 1 cut(s) 900
ApeKI GCWGC 1 cut(s) 725
ArsI GACNNNNNNTTYG 2 cut(s) 1178, 1210
Asp700I GAANNNNTTC 1 cut(s) 234
AspS9I GGNCC 1 cut(s) 323
AsuC2I CCSGG 1 cut(s) 249
AsuHPI GGTGA 4 cut(s) 515, 684, 776, 995
AsuII TTCGAA 1 cut(s) 256
AvaI CYCGRG 1 cut(s) 14
AvaII GGWCC 1 cut(s) 323
BaeGI GKGCMC 1 cut(s) 600
BaeI ACNNNNGTAYC 2 cut(s) 1002, 1035
BalI TGGCCA 1 cut(s) 902
BanII GRGCYC 2 cut(s) 1001, 1399
BarI GAAGNNNNNNTAC 2 cut(s) 1137, 1169
BauI CACGAG 1 cut(s) 798
BbsI GAAGAC 4 cut(s) 237, 265, 310, 1145
Bbv12I GWGCWC 3 cut(s) 529, 1001, 1399
BbvI GCAGC 1 cut(s) 712
BccI CCATC 6 cut(s) 64, 171, 987, 1048, 1070, 1284
BcgI CGANNNNNNTGC 2 cut(s) 1406, 1440
BciT130I CCWGG 3 cut(s) 240, 1377, 1640
BclI TGATCA 1 cut(s) 1090
BcnI CCSGG 1 cut(s) 249
BcoDI GTCTC 8 cut(s) 386, 483, 801, 1209, 1275, 1619, 1758, 1826
BfaI CTAG 2 cut(s) 422, 1304
BfmI CTRYAG 2 cut(s) 1443, 1704
BisI GCNGC 3 cut(s) 39, 723, 726
BlsI GCNGC 3 cut(s) 40, 724, 727
BmcAI AGTACT 1 cut(s) 97
Bme1390I CCNGG 4 cut(s) 240, 249, 1377, 1640
Bme18I GGWCC 1 cut(s) 323
BmeT110I CYCGRG 1 cut(s) 14
BmgT120I GGNCC 1 cut(s) 323
BmrFI CCNGG 4 cut(s) 240, 249, 1377, 1640
BmrI ACTGGG 1 cut(s) 408
BmsI GCATC 4 cut(s) 188, 306, 757, 1093
BmuI ACTGGG 1 cut(s) 408
BpiI GAAGAC 4 cut(s) 237, 265, 310, 1145
BpmI CTGGAG 2 cut(s) 507, 876
Bpu14I TTCGAA 1 cut(s) 256
BpuEI CTTGAG 2 cut(s) 45, 141
BpuMI CCSGG 1 cut(s) 249
BsaI GGTCTC 3 cut(s) 483, 1209, 1826
BsaJI CCNNGG 1 cut(s) 592
BsaWI WCCGGW 1 cut(s) 694
Bsc4I CCNNNNNNNGG 2 cut(s) 485, 560
Bse1I ACTGG 4 cut(s) 414, 490, 1086, 1688
Bse3DI GCAATG 3 cut(s) 1202, 1242, 1576
BseBI CCWGG 3 cut(s) 240, 1377, 1640
BseDI CCNNGG 1 cut(s) 592
BseGI GGATG 6 cut(s) 109, 115, 277, 1081, 1295, 1363
BseLI CCNNNNNNNGG 2 cut(s) 485, 560
BseMI GCAATG 3 cut(s) 1202, 1242, 1576
BseMII CTCAG 1 cut(s) 1491
BseNI ACTGG 4 cut(s) 414, 490, 1086, 1688
BseRI GAGGAG 1 cut(s) 57
BseSI GKGCMC 1 cut(s) 600
BseXI GCAGC 1 cut(s) 712
BseYI CCCAGC 1 cut(s) 1174
BshFI GGCC 1 cut(s) 902
BsiHKAI GWGCWC 3 cut(s) 529, 1001, 1399
BsiHKCI CYCGRG 1 cut(s) 14
BsiSI CCGG 2 cut(s) 248, 695
BslFI GGGAC 1 cut(s) 264
BslI CCNNNNNNNGG 2 cut(s) 485, 560
BsmAI GTCTC 8 cut(s) 386, 483, 801, 1209, 1275, 1619, 1758, 1826
BsmFI GGGAC 1 cut(s) 264
BsmI GAATGC 2 cut(s) 622, 1237
BsnI GGCC 1 cut(s) 902
Bso31I GGTCTC 3 cut(s) 483, 1209, 1826
BsoBI CYCGRG 1 cut(s) 14
Bsp119I TTCGAA 1 cut(s) 256
Bsp1286I GDGCHC 4 cut(s) 529, 600, 1001, 1399
Bsp143I GATC 7 cut(s) 43, 83, 244, 292, 906, 1090, 1573
BspACI CCGC 6 cut(s) 38, 41, 369, 501, 722, 942
BspANI GGCC 1 cut(s) 902
BspCNI CTCAG 1 cut(s) 1492
BspHI TCATGA 1 cut(s) 565
BspPI GGATC 3 cut(s) 51, 78, 239
BspT104I TTCGAA 1 cut(s) 256
BspTNI GGTCTC 3 cut(s) 483, 1209, 1826
BsrDI GCAATG 3 cut(s) 1202, 1242, 1576
BsrI ACTGG 4 cut(s) 414, 490, 1086, 1688
BssECI CCNNGG 1 cut(s) 592
BssMI GATC 7 cut(s) 43, 83, 244, 292, 906, 1090, 1573
BssSI CACGAG 1 cut(s) 798
BssT1I CCWWGG 1 cut(s) 592
Bst2BI CACGAG 1 cut(s) 798
Bst2UI CCWGG 3 cut(s) 240, 1377, 1640
Bst4CI ACNGT 2 cut(s) 1447, 1705
Bst6I CTCTTC 3 cut(s) 888, 1056, 1207
BstAPI GCANNNNNTGC 1 cut(s) 1721
BstBI TTCGAA 1 cut(s) 256
BstC8I GCNNGC 3 cut(s) 499, 1108, 1112
BstDEI CTNAG 1 cut(s) 1500
BstF5I GGATG 6 cut(s) 109, 115, 277, 1081, 1295, 1363
BstKTI GATC 7 cut(s) 46, 86, 247, 295, 909, 1093, 1576
BstMAI GTCTC 8 cut(s) 386, 483, 801, 1209, 1275, 1619, 1758, 1826
BstMBI GATC 7 cut(s) 43, 83, 244, 292, 906, 1090, 1573
BstMWI GCNNNNNNNGC 1 cut(s) 1721
BstNI CCWGG 3 cut(s) 240, 1377, 1640
BstNSI RCATGY 1 cut(s) 1771
BstSCI CCNGG 4 cut(s) 238, 247, 1375, 1638
BstSFI CTRYAG 2 cut(s) 1443, 1704
BstSLI GKGCMC 1 cut(s) 600
BstV1I GCAGC 1 cut(s) 712
BstV2I GAAGAC 4 cut(s) 237, 265, 310, 1145
BstX2I RGATCY 2 cut(s) 83, 244
BstYI RGATCY 2 cut(s) 83, 244
BsuRI GGCC 1 cut(s) 902
BtsCI GGATG 6 cut(s) 109, 115, 277, 1081, 1295, 1363
BtsIMutI CAGTG 3 cut(s) 1093, 1676, 1701
Cac8I GCNNGC 3 cut(s) 499, 1108, 1112
CaiI CAGNNNCTG 1 cut(s) 485
CciI TCATGA 1 cut(s) 565
Cfr13I GGNCC 1 cut(s) 323
CseI GACGC 2 cut(s) 827, 1398
CsiI ACCWGGT 1 cut(s) 1638
Csp6I GTAC 3 cut(s) 96, 195, 1011
CviAII CATG 9 cut(s) 396, 566, 707, 864, 1276, 1726, 1768, 1786, 1871
CviQI GTAC 3 cut(s) 96, 195, 1011
DdeI CTNAG 1 cut(s) 1500
DpnI GATC 7 cut(s) 45, 85, 246, 294, 908, 1092, 1575
DpnII GATC 7 cut(s) 43, 83, 244, 292, 906, 1090, 1573
DraI TTTAAA 2 cut(s) 475, 1582
EaeI YGGCCR 1 cut(s) 900
Eam1104I CTCTTC 3 cut(s) 888, 1056, 1207
EarI CTCTTC 3 cut(s) 888, 1056, 1207
EciI GGCGGA 1 cut(s) 56
Ecl136II GAGCTC 2 cut(s) 999, 1397
Eco130I CCWWGG 1 cut(s) 592
Eco24I GRGCYC 2 cut(s) 1001, 1399
Eco31I GGTCTC 3 cut(s) 483, 1209, 1826
Eco47I GGWCC 1 cut(s) 323
Eco53kI GAGCTC 2 cut(s) 999, 1397
Eco57I CTGAAG 1 cut(s) 204
Eco88I CYCGRG 1 cut(s) 14
EcoICRI GAGCTC 2 cut(s) 999, 1397
EcoO109I RGGNCCY 1 cut(s) 323
EcoRII CCWGG 3 cut(s) 238, 1375, 1638
EcoT14I CCWWGG 1 cut(s) 592
EcoT22I ATGCAT 3 cut(s) 181, 772, 1419
EcoT38I GRGCYC 2 cut(s) 1001, 1399
ErhI CCWWGG 1 cut(s) 592
FaeI CATG 9 cut(s) 399, 569, 710, 867, 1279, 1729, 1771, 1789, 1874
FalI AAGNNNNNCTT 2 cut(s) 641, 673
FaqI GGGAC 1 cut(s) 264
FatI CATG 9 cut(s) 395, 565, 706, 863, 1275, 1725, 1767, 1785, 1870
FauI CCCGC 1 cut(s) 935
FbaI TGATCA 1 cut(s) 1090
Fnu4HI GCNGC 3 cut(s) 39, 723, 726
FokI GGATG 6 cut(s) 96, 102, 264, 1088, 1302, 1370
FriOI GRGCYC 2 cut(s) 1001, 1399
Fsp4HI GCNGC 3 cut(s) 39, 723, 726
FspBI CTAG 2 cut(s) 422, 1304
GluI GCNGC 3 cut(s) 39, 723, 726
GsaI CCCAGC 1 cut(s) 1178
GsuI CTGGAG 2 cut(s) 507, 876
HaeIII GGCC 1 cut(s) 902
HapII CCGG 2 cut(s) 248, 695
HgaI GACGC 2 cut(s) 827, 1398
Hin1II CATG 9 cut(s) 399, 569, 710, 867, 1279, 1729, 1771, 1789, 1874
HincII GTYRAC 4 cut(s) 51, 332, 376, 790
HindII GTYRAC 4 cut(s) 51, 332, 376, 790
HindIII AAGCTT 1 cut(s) 6
HinfI GANTC 8 cut(s) 572, 794, 878, 955, 1121, 1130, 1295, 1681
HpaI GTTAAC 1 cut(s) 376
HpaII CCGG 2 cut(s) 248, 695
HphI GGTGA 4 cut(s) 515, 684, 776, 995
Hpy166II GTNNAC 5 cut(s) 51, 332, 376, 790, 1657
Hpy188I TCNGA 4 cut(s) 103, 184, 577, 628
Hpy8I GTNNAC 5 cut(s) 51, 332, 376, 790, 1657
Hpy99I CGWCG 2 cut(s) 876, 1392
HpyAV CCTTC 3 cut(s) 245, 940, 1159
HpyCH4III ACNGT 2 cut(s) 1447, 1705
HpyCH4IV ACGT 1 cut(s) 871
HpyF10VI GCNNNNNNNGC 1 cut(s) 1721
HpyF3I CTNAG 1 cut(s) 1500
HpySE526I ACGT 1 cut(s) 871
Hsp92II CATG 9 cut(s) 399, 569, 710, 867, 1279, 1729, 1771, 1789, 1874
Ksp22I TGATCA 1 cut(s) 1090
KspAI GTTAAC 1 cut(s) 376
Kzo9I GATC 7 cut(s) 43, 83, 244, 292, 906, 1090, 1573
LmnI GCTCC 4 cut(s) 70, 996, 1261, 1402
Lsp1109I GCAGC 1 cut(s) 712
LweI GCATC 4 cut(s) 188, 306, 757, 1093
MabI ACCWGGT 1 cut(s) 1638
MaeI CTAG 2 cut(s) 422, 1304
MaeII ACGT 1 cut(s) 871
MaeIII GTNAC 2 cut(s) 1194, 1405
MalI GATC 7 cut(s) 45, 85, 246, 294, 908, 1092, 1575
MboI GATC 7 cut(s) 43, 83, 244, 292, 906, 1090, 1573
MfeI CAATTG 2 cut(s) 683, 1265
MflI RGATCY 2 cut(s) 83, 244
MhlI GDGCHC 4 cut(s) 529, 600, 1001, 1399
MlsI TGGCCA 1 cut(s) 902
MluNI TGGCCA 1 cut(s) 902
MlyI GAGTC 2 cut(s) 803, 1115
MnlI CCTC 4 cut(s) 78, 123, 851, 1066
Mox20I TGGCCA 1 cut(s) 902
Mph1103I ATGCAT 3 cut(s) 181, 772, 1419
MroXI GAANNNNTTC 1 cut(s) 234
MscI TGGCCA 1 cut(s) 902
MseI TTAA 5 cut(s) 222, 375, 474, 1248, 1581
MslI CAYNNNNRTG 4 cut(s) 282, 1412, 1454, 1772
Msp20I TGGCCA 1 cut(s) 902
MspA1I CMGCKG 1 cut(s) 369
MspI CCGG 2 cut(s) 248, 695
MspR9I CCNGG 4 cut(s) 240, 249, 1377, 1640
MunI CAATTG 2 cut(s) 683, 1265
Mva1269I GAATGC 2 cut(s) 622, 1237
MvaI CCWGG 3 cut(s) 240, 1377, 1640
MwoI GCNNNNNNNGC 1 cut(s) 1721
NciI CCSGG 1 cut(s) 249
NdeII GATC 7 cut(s) 43, 83, 244, 292, 906, 1090, 1573
NlaIII CATG 9 cut(s) 399, 569, 710, 867, 1279, 1729, 1771, 1789, 1874
NmuCI GTSAC 2 cut(s) 1194, 1405
NsiI ATGCAT 3 cut(s) 181, 772, 1419
NspI RCATGY 1 cut(s) 1771
NspV TTCGAA 1 cut(s) 256
PaeR7I CTCGAG 1 cut(s) 14
PagI TCATGA 1 cut(s) 565
PciI ACATGT 1 cut(s) 1767
PctI GAATGC 2 cut(s) 622, 1237
PdmI GAANNNNTTC 1 cut(s) 234
PfeI GAWTC 6 cut(s) 572, 878, 955, 1130, 1295, 1681
PflFI GACNNNGTC 1 cut(s) 1640
PflMI CCANNNNNTGG 1 cut(s) 485
PfoI TCCNGGA 3 cut(s) 238, 247, 1375
PkrI GCNGC 3 cut(s) 40, 724, 727
PleI GAGTC 2 cut(s) 802, 1115
PpsI GAGTC 2 cut(s) 802, 1115
PpuMI RGGWCCY 1 cut(s) 323
PscI ACATGT 1 cut(s) 1767
PsiI TTATAA 2 cut(s) 1736, 1882
Psp124BI GAGCTC 2 cut(s) 1001, 1399
Psp5II RGGWCCY 1 cut(s) 323
Psp6I CCWGG 3 cut(s) 238, 1375, 1638
PspFI CCCAGC 1 cut(s) 1174
PspGI CCWGG 3 cut(s) 238, 1375, 1638
PspPI GGNCC 1 cut(s) 323
PspPPI RGGWCCY 1 cut(s) 323
PstNI CAGNNNCTG 1 cut(s) 485
PsuI RGATCY 2 cut(s) 83, 244
PsyI GACNNNGTC 1 cut(s) 1640
RsaI GTAC 3 cut(s) 97, 196, 1012
RsaNI GTAC 3 cut(s) 96, 195, 1011
RseI CAYNNNNRTG 4 cut(s) 282, 1412, 1454, 1772
SacI GAGCTC 2 cut(s) 1001, 1399
SaqAI TTAA 5 cut(s) 222, 375, 474, 1248, 1581
SatI GCNGC 3 cut(s) 39, 723, 726
Sau3AI GATC 7 cut(s) 43, 83, 244, 292, 906, 1090, 1573
Sau96I GGNCC 1 cut(s) 323
ScaI AGTACT 1 cut(s) 97
SchI GAGTC 2 cut(s) 803, 1115
ScrFI CCNGG 4 cut(s) 240, 249, 1377, 1640
SduI GDGCHC 4 cut(s) 529, 600, 1001, 1399
SexAI ACCWGGT 1 cut(s) 1638
SfaNI GCATC 4 cut(s) 188, 306, 757, 1093
SfcI CTRYAG 2 cut(s) 1443, 1704
Sfr274I CTCGAG 1 cut(s) 14
SfuI TTCGAA 1 cut(s) 256
SinI GGWCC 1 cut(s) 323
SlaI CTCGAG 1 cut(s) 14
SmiMI CAYNNNNRTG 4 cut(s) 282, 1412, 1454, 1772
SmlI CTYRAG 3 cut(s) 14, 60, 156
SmoI CTYRAG 3 cut(s) 14, 60, 156
SsiI CCGC 6 cut(s) 38, 41, 369, 501, 722, 942
SspI AATATT 1 cut(s) 1848
SspMI CTAG 2 cut(s) 422, 1304
SstI GAGCTC 2 cut(s) 1001, 1399
StyD4I CCNGG 4 cut(s) 238, 247, 1375, 1638
StyI CCWWGG 1 cut(s) 592
TaaI ACNGT 2 cut(s) 1447, 1705
TaiI ACGT 1 cut(s) 874
TaqI TCGA 6 cut(s) 15, 256, 289, 295, 886, 1800
TatI WGTACW 1 cut(s) 95
TauI GCSGC 2 cut(s) 41, 725
TfiI GAWTC 6 cut(s) 572, 878, 955, 1130, 1295, 1681
Tru1I TTAA 5 cut(s) 222, 375, 474, 1248, 1581
Tru9I TTAA 5 cut(s) 222, 375, 474, 1248, 1581
TscAI CASTG 3 cut(s) 1093, 1683, 1708
TseFI GTSAC 2 cut(s) 1194, 1405
TseI GCWGC 1 cut(s) 725
Tsp45I GTSAC 2 cut(s) 1194, 1405
TspRI CASTG 3 cut(s) 1093, 1683, 1708
Tth111I GACNNNGTC 1 cut(s) 1640
Van91I CCANNNNNTGG 1 cut(s) 485
VpaK11BI GGWCC 1 cut(s) 323
XceI RCATGY 1 cut(s) 1771
XhoI CTCGAG 1 cut(s) 14
XmnI GAANNNNTTC 1 cut(s) 234
XspI CTAG 2 cut(s) 422, 1304
ZrmI AGTACT 1 cut(s) 97
Zsp2I ATGCAT 3 cut(s) 181, 772, 1419
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.