RchiOBHm_Chr1g0380371

Zinc finger MYM-type protein 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000122
Physical Location & Seq
Forward (+)
66062518 .. 66065874
3357 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ60364

Sequence Viewer

Length: 2406 bp
ATGCAGGTTCAGTGGAGATATTTTAAAAAAATATCGAGACCAGAGGAGACTTCATCTTCTACAAAGAACAATGTTGATAGTGAAAGCTCAAAGAAAAATGAACTTGAAGCAATTTTGGATGATCTTCCTTCAGACCCTGCACGTCGAAAGCGTATCTTGGATTATGATCCAAATATTCGTGATCAAGTTCGACGACGTTATTTGCTTAAGGGTCCTTGTCAGCCTCGAAACCATGAGTTTCCCCAAAAGGTAATAAGTGGAACAAAACGACGTTTTGTCCCTTCTTGGTTTGATGAACATCCTGAATGGTTAGAGTATAGCATAGAAAATGATGCTATGTTTTGTCTATGTTGTTATCTCTTTAAACCACATCATGGTGACCAAGGAGGCGGTGATACATTTACTTGCAAAGGTTTCTCTAATTGGAAGAATAAAAAAGGACTTCAAGATCATGTTGGAGGTCTCGGTAGTGTTCACAACCAAGCTTTACTAAATTGCCAAGCTTTAATGGATCAAAAACAGCATCTTGAGTCAGTAATTAGTCGTCAAGTGGAATCCTCTAAGCATAACTATTACACTCTCTTGAATGCTTCCATTGATTGTGTTCGTTTCTTGTTGCGGCAAGGTCTTGCTTTTCGTGGTCATTATGAATCTGAATCCTCTAATAATAGAGGGAACTTTCTTGAACTTCTAGAATTTCTTGCTGAACATAATGACAGGGTGAAGGCTGTTGCCTTTGAAAATGCTCCTGGAAATCTACAGTTGACATCACCTGTTATACAGAAAGATATTATAAATGCAGCTGCAGTTGAAACTTTAAATGCAATCATGTTTGATATGGGTGATGCCCCATTCTCTATTTTGGTTGATGAAGCACGAGATCATTCAATAAAAGAGCAAATGGCAGTTGTTCTGCGCTATGTAGACAATAAAGGCCAAGTCATTGAAAGGTTTGTTGGCATCCAACATGTTAAAAGCACTGATGCACGGTCCTTAAAACTTGCAATAGACGAGTTATTCTCCAGAAATGGGTTGAGCATATCAAATCTTCGAGGACAGGGCTATGATGGGGCTAGTAATATGCAAGGTGAGTTCAATGGTCTTAAGGCACTTATCTTGAAAGAAAATGATTGTGCATTTTATGTTCATTGTTTTGCACATCAACTTCAACTTGCCCTTGTTGCTTTAGCTAAAAATCATGTTCTAGTTGCTTCATTCTTTTTCTTAGTAACAAGAGTGGTTAACATTGTTGGAGCATCATGTAAACGTCGTGATCTTCTTCGAGAGCAACAACAAAATGAAGTGATGGAAGCTCTTCACAATGATGATCTTCTAAGTGGAAGAGGGTTGAATCAAGAAACTACTCTCAAGCGTCCTGGTGATACACGTTGGGGTTCACATTACGGCACCTTACTGAGTATTATTTCTATGTTTTCTTCCATAATTAAGGTGATTGAAATGATTATTGAAGATGGAGCATACCCTGATCAGAGAGGGGAATGTAATCTTTTGCTAGCACAAATGCAATCGTTTGACTTCATATTTTGTCTGTTTTTAATGAGGCAAGTGTTAGGAGTCACGAATGATTTATCACAAGCATTACAAAAGAATGATCAAGATATTGTCAATGCTATGGATTTAGTCAAGGCATGCAAGCAGAAACTACAAAAAATGAGGGAAGATGAATGTGAATGGGATGATTTTCTTGACAAGGTTTATTCTTTTTGTGGCAAGCATGGTATCAAGATTCCCAATATGGATGATGTCTTTGTTGCTCAAGGGAAATCCCAACGGAGAGCTGAAAAAATAACAAACCTTCATCATTATCGAGTAGAGGTCTTTTATACTGTGATTGATAGACAACTTTCAGACTTGAATGATCGTTTTAATGAGGTAAACTCTGAGCTTCTTCTTTGTGTTGCAAGTTTAAGTCCAGATAATTTATTCTCCGCTTTTGATAAGCAAAAGTTACTCCGTCTTGCCAAATTCTATCCAAGAGATTTTTCTGAAAGAGATATCTTATCACTTGAAGACAAGCTTGATATTTATGCTAACGAAATGCGATTCAACAATGAATTTTCTCAATTGAAAGGAATTGGTAGTCTTGCAAAAAAATTGGTGGAGACAGGAAAGCACAAAACACATGCATCAGTCTACAAGCTTCTAACTTTGGCTTTAGTTCTACCGGTTGCAACAGCTTCAGTGGAAAGAGTATTCTCAGCTATGAACATTGTGAAGAATCCACTTCGTAATAGAATGGGAGATCAATGGATGAATGATAGTTTGCTTGTTTACATTGAGAAAGATATATTCAATAGCATTGGTAATGATGCTATAATGCAGCGTTTTCAAAATATGAAATCGCGCCGTGGACAATTACCGTCTCGTACTAAATTTGTAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

801

Amino Acids

91.64

Weight (kDa)

7.56

Isoelectric Point (pI)

41.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 132 - 367 1.3e-73 Domain of unknown function (DUF4371)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19260 AT1G41920 AT1G42710 AT2G06541 AT2G06541 AT3G29450 AT3G29763 AT3G29765 AT3G31402 AT3G31402 AT4G09660
fragaria_vesca FvH4_1g22711 FvH4_3g10612 FvH4_3g23261 FvH4_3g31623 FvH4_3g33391 FvH4_3g37321 FvH4_3g43192 FvH4_3g43193 FvH4_4g00181 FvH4_4g00251 FvH4_4g08751 FvH4_4g15271 FvH4_5g27190 FvH4_6g02122 FvH4_6g26880 FvH4_6g35121 FvH4_7g16871 FvH4_7g19080 FvH4_7g30071
malus_domestica MD02G1162100.v1.1 MD03G1081700.v1.1 MD09G1280500.v1.1 MD12G1083800.v1.1 MD12G1128200.v1.1
prunus_persica Prupe.7G129800_v2.0.a1
pyrus_communis pycom01g08000 pycom02g13840 pycom02g18030 pycom04g01290 pycom04g12580 pycom05g02550 pycom05g06740 pycom05g26200 pycom07g09850 pycom08g10610 pycom10g11280 pycom11g12580 pycom11g22260 pycom12g18440 pycom13g20080 pycom15g25600 pycom16g23600 pycom17g10070
rosa_chinensis RchiOBHm_Chr1g0313551 RchiOBHm_Chr1g0364331 RchiOBHm_Chr1g0369741 RchiOBHm_Chr1g0380371 RchiOBHm_Chr2g0097391 RchiOBHm_Chr2g0113561 RchiOBHm_Chr2g0114151 RchiOBHm_Chr2g0119761 RchiOBHm_Chr2g0149851 RchiOBHm_Chr2g0151931 RchiOBHm_Chr2g0166411 RchiOBHm_Chr3g0453661 RchiOBHm_Chr3g0466101 RchiOBHm_Chr3g0477911 RchiOBHm_Chr3g0486441 RchiOBHm_Chr4g0390161 RchiOBHm_Chr4g0392191 RchiOBHm_Chr4g0414461 RchiOBHm_Chr4g0421421 RchiOBHm_Chr5g0023801 RchiOBHm_Chr5g0040121 RchiOBHm_Chr5g0045381 RchiOBHm_Chr5g0061511 RchiOBHm_Chr5g0062621 RchiOBHm_Chr5g0064161 RchiOBHm_Chr5g0068711 RchiOBHm_Chr6g0246041 RchiOBHm_Chr6g0252511 RchiOBHm_Chr6g0252521 RchiOBHm_Chr6g0263361 RchiOBHm_Chr6g0269451 RchiOBHm_Chr6g0275351 RchiOBHm_Chr6g0288481 RchiOBHm_Chr6g0310011 RchiOBHm_Chr6g0310021 RchiOBHm_Chr7g0223071 RchiOBHm_Chr7g0227621 RchiOBHm_Chr7g0242581
rosa_laevigata RLG00000033957
rosa_multiflora Rmu_co8455865.1_g000001 Rmu_sc0000021.1_g000011 Rmu_sc0000079.1_g000049 Rmu_sc0000087.1_g000015 Rmu_sc0000151.1_g000008 Rmu_sc0000365.1_g000014 Rmu_sc0000446.1_g000054 Rmu_sc0000446.1_g000055 Rmu_sc0000534.1_g000006 Rmu_sc0000724.1_g000020 Rmu_sc0000859.1_g000001 Rmu_sc0000876.1_g000002 Rmu_sc0000881.1_g000005 Rmu_sc0000929.1_g000014 Rmu_sc0001112.1_g000004 Rmu_sc0001136.1_g000009 Rmu_sc0001353.1_g000064 Rmu_sc0001662.1_g000005 Rmu_sc0001764.1_g000006 Rmu_sc0001982.1_g000015 Rmu_sc0002052.1_g000008 Rmu_sc0002052.1_g000009 Rmu_sc0002158.1_g000011 Rmu_sc0002285.1_g000005 Rmu_sc0002983.1_g000025 Rmu_sc0003063.1_g000006 Rmu_sc0003076.1_g000005 Rmu_sc0003221.1_g000053 Rmu_sc0003382.1_g000010 Rmu_sc0003733.1_g000054 Rmu_sc0003997.1_g000005 Rmu_sc0004283.1_g000008 Rmu_sc0004283.1_g000053 Rmu_sc0004509.1_g000007 Rmu_sc0004540.1_g000028 Rmu_sc0004657.1_g000005 Rmu_sc0004935.1_g000006 Rmu_sc0005072.1_g000003 Rmu_sc0005248.1_g000001 Rmu_sc0006161.1_g000001 Rmu_sc0006209.1_g000005 Rmu_sc0006576.1_g000018 Rmu_sc0006576.1_g000019 Rmu_sc0007121.1_g000016 Rmu_sc0007121.1_g000032 Rmu_sc0007753.1_g000016 Rmu_sc0007795.1_g000009 Rmu_sc0007841.1_g000019 Rmu_sc0008339.1_g000021 Rmu_sc0008339.1_g000022 Rmu_sc0008432.1_g000001 Rmu_sc0008633.1_g000009 Rmu_sc0009104.1_g000013 Rmu_sc0011469.1_g000001 Rmu_sc0012039.1_g000001 Rmu_sc0013947.1_g000007 Rmu_sc0015560.1_g000001 Rmu_sc0017369.1_g000001 Rmu_sc0021648.1_g000001 Rmu_sc0022867.1_g000003 Rmu_sc0027801.1_g000001 Rmu_sc0027801.1_g000002 Rmu_sc0029861.1_g000001 Rmu_sc0030314.1_g000001 Rmu_sc0040149.1_g000001 Rmu_ssc0000089.1_g000028 Rmu_ssc0000480.1_g000033
rosa_roxburghii Rroxscaffold_1G00002540 Rroxscaffold_1G00013960 Rroxscaffold_1G00041160 Rroxscaffold_1G00045580 Rroxscaffold_3G00247310 Rroxscaffold_3G00267070 Rroxscaffold_4G00313830 Rroxscaffold_5G00372270 Rroxscaffold_6G00404800 Rroxscaffold_6G00406090
rosa_rugosa Rorug03G0269800 Rorug04G0142900 Rorug04G0152600 Rorug05G0223300.1 Rorug05G0266400 Rorug06G0008900 Rorug07G0086000 Rorug07G0205800 Rorug07G0270900
rosa_wichuraiana Rw0G001600 Rw0G017220 Rw0G017620 Rw0G018380 Rw1G002320 Rw1G020940 Rw1G021200 Rw1G022610 Rw1G038680 Rw2G013320 Rw2G016850 Rw2G024020 Rw2G025210 Rw2G032270 Rw2G039490 Rw2G041630 Rw2G048450 Rw2G051510 Rw3G025320 Rw4G003260 Rw4G007300 Rw4G009290 Rw4G010910 Rw4G013260 Rw5G008190 Rw5G008290 Rw5G018740 Rw5G023640 Rw5G028800 Rw5G031830 Rw5G041280 Rw5G044050 Rw6G007060 Rw6G008230 Rw6G009960 Rw6G013460 Rw6G014610 Rw6G017780 Rw6G033200 Rw7G021340 Rw7G023750 Rw7G032290 Rw7G032450 Rw7G033880 Rw7G038580 Rw7G040180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 794
AccB1I GGYRCC 1 cut(s) 1406
AccB7I CCANNNNNTGG 1 cut(s) 374
AccI GTMKAC 2 cut(s) 924, 2154
AccII CGCG 1 cut(s) 2365
AciI CCGC 3 cut(s) 390, 619, 1950
AclWI GGATC 2 cut(s) 161, 519
AcsI RAATTY 4 cut(s) 695, 1985, 2075, 2393
AcuI CTGAAG 2 cut(s) 114, 2184
AfaI GTAC 1 cut(s) 2389
AfiI CCNNNNNNNGG 2 cut(s) 374, 1029
AflII CTTAAG 2 cut(s) 206, 1103
AflIII ACRYGT 2 cut(s) 967, 1385
AgeI ACCGGT 1 cut(s) 2185
AhdI GACNNNNNGTC 1 cut(s) 275
AjiI CACGTC 1 cut(s) 143
AjnI CCWGG 2 cut(s) 748, 1375
AjuI GAANNNNNNNTTGG 4 cut(s) 939, 971, 1987, 2019
Alw26I GTCTC 5 cut(s) 31, 41, 467, 2117, 2388
AlwI GGATC 2 cut(s) 161, 519
AlwNI CAGNNNCTG 1 cut(s) 137
AoxI GGCC 1 cut(s) 934
ApeKI GCWGC 3 cut(s) 800, 803, 2341
ApoI RAATTY 4 cut(s) 695, 1985, 2075, 2393
AsiGI ACCGGT 1 cut(s) 2185
Asp700I GAANNNNTTC 1 cut(s) 1314
AspLEI GCGC 2 cut(s) 918, 2367
AspS9I GGNCC 2 cut(s) 212, 990
AsuHPI GGTGA 8 cut(s) 389, 404, 733, 762, 854, 1100, 1391, 1462
AsuNHI GCTAGC 1 cut(s) 1513
AvaII GGWCC 2 cut(s) 212, 990
BanI GGYRCC 1 cut(s) 1406
BauI CACGAG 1 cut(s) 876
BbsI GAAGAC 1 cut(s) 2037
BbvI GCAGC 3 cut(s) 790, 812, 2353
BccI CCATC 3 cut(s) 1061, 1300, 1466
BceAI ACGGC 2 cut(s) 1420, 2352
BciT130I CCWGG 2 cut(s) 750, 1377
BclI TGATCA 3 cut(s) 181, 1486, 1612
BcoDI GTCTC 5 cut(s) 31, 41, 467, 2117, 2388
BfaI CTAG 4 cut(s) 692, 1074, 1205, 1514
BfmI CTRYAG 2 cut(s) 758, 804
BfrI CTTAAG 2 cut(s) 206, 1103
BisI GCNGC 4 cut(s) 620, 801, 804, 2342
BlsI GCNGC 4 cut(s) 621, 802, 805, 2343
Bme1390I CCNGG 2 cut(s) 750, 1377
Bme18I GGWCC 2 cut(s) 212, 990
BmeRI GACNNNNNGTC 1 cut(s) 275
BmgBI CACGTC 1 cut(s) 143
BmgT120I GGNCC 2 cut(s) 212, 990
BmiI GGNNCC 2 cut(s) 213, 1408
BmrFI CCNGG 2 cut(s) 750, 1377
BmsI GCATC 8 cut(s) 322, 532, 835, 969, 973, 1265, 2156, 2320
BmtI GCTAGC 1 cut(s) 1517
BpiI GAAGAC 1 cut(s) 2037
BplI GAGNNNNNCTC 4 cut(s) 1004, 1036, 1883, 1915
BpmI CTGGAG 1 cut(s) 1006
BpuEI CTTGAG 3 cut(s) 548, 1352, 1761
BsaBI GATNNNNATC 2 cut(s) 165, 297
BsaI GGTCTC 2 cut(s) 31, 467
BsaJI CCNNGG 2 cut(s) 382, 2368
BsaWI WCCGGW 1 cut(s) 2185
Bsc4I CCNNNNNNNGG 2 cut(s) 374, 1029
Bse118I RCCGGY 1 cut(s) 2185
Bse8I GATNNNNATC 2 cut(s) 165, 297
BseBI CCWGG 2 cut(s) 750, 1377
BseDI CCNNGG 2 cut(s) 382, 2368
BseGI GGATG 6 cut(s) 124, 298, 960, 1702, 1765, 2277
BseJI GATNNNNATC 2 cut(s) 165, 297
BseLI CCNNNNNNNGG 2 cut(s) 374, 1029
BseMII CTCAG 3 cut(s) 1406, 1893, 2232
BseRI GAGGAG 1 cut(s) 59
BseXI GCAGC 3 cut(s) 790, 812, 2353
BsgI GTGCAG 1 cut(s) 123
Bsh1236I CGCG 1 cut(s) 2365
BshFI GGCC 1 cut(s) 936
BshNI GGYRCC 1 cut(s) 1406
BshTI ACCGGT 1 cut(s) 2185
BsiSI CCGG 1 cut(s) 2186
BslFI GGGAC 1 cut(s) 263
BslI CCNNNNNNNGG 2 cut(s) 374, 1029
BsmAI GTCTC 5 cut(s) 31, 41, 467, 2117, 2388
BsmBI CGTCTC 1 cut(s) 2388
BsmFI GGGAC 1 cut(s) 263
BsmI GAATGC 1 cut(s) 592
BsnI GGCC 1 cut(s) 936
Bso31I GGTCTC 2 cut(s) 31, 467
BspACI CCGC 3 cut(s) 390, 619, 1950
BspANI GGCC 1 cut(s) 936
BspCNI CTCAG 3 cut(s) 1407, 1894, 2231
BspFNI CGCG 1 cut(s) 2365
BspLI GGNNCC 2 cut(s) 213, 1408
BspMAI CTGCAG 1 cut(s) 808
BspOI GCTAGC 1 cut(s) 1517
BspPI GGATC 2 cut(s) 161, 519
BspQI GCTCTTC 1 cut(s) 1320
BspT107I GGYRCC 1 cut(s) 1406
BspTI CTTAAG 2 cut(s) 206, 1103
BspTNI GGTCTC 2 cut(s) 31, 467
BsrFI RCCGGY 1 cut(s) 2185
BssAI RCCGGY 1 cut(s) 2185
BssECI CCNNGG 2 cut(s) 382, 2368
BssSI CACGAG 1 cut(s) 876
BssT1I CCWWGG 1 cut(s) 382
Bst2BI CACGAG 1 cut(s) 876
Bst2UI CCWGG 2 cut(s) 750, 1377
Bst4CI ACNGT 4 cut(s) 762, 990, 1849, 2382
Bst6I CTCTTC 2 cut(s) 1320, 1336
BstAFI CTTAAG 2 cut(s) 206, 1103
BstC8I GCNNGC 4 cut(s) 1515, 1651, 1655, 1733
BstDEI CTNAG 6 cut(s) 561, 1225, 1334, 1415, 1902, 2218
BstDSI CCRYGG 1 cut(s) 2368
BstEII GGTNACC 1 cut(s) 377
BstF5I GGATG 6 cut(s) 124, 298, 960, 1702, 1765, 2277
BstFNI CGCG 1 cut(s) 2365
BstHHI GCGC 2 cut(s) 918, 2367
BstMAI GTCTC 5 cut(s) 31, 41, 467, 2117, 2388
BstMWI GCNNNNNNNGC 1 cut(s) 1181
BstNI CCWGG 2 cut(s) 750, 1377
BstNSI RCATGY 3 cut(s) 971, 1653, 2147
BstPI GGTNACC 1 cut(s) 377
BstSCI CCNGG 2 cut(s) 748, 1375
BstSFI CTRYAG 2 cut(s) 758, 804
BstUI CGCG 1 cut(s) 2365
BstV1I GCAGC 3 cut(s) 790, 812, 2353
BstV2I GAAGAC 1 cut(s) 2037
BsuRI GGCC 1 cut(s) 936
BtgI CCRYGG 1 cut(s) 2368
BtrI CACGTC 1 cut(s) 143
BtsCI GGATG 6 cut(s) 124, 298, 960, 1702, 1765, 2277
BtsIMutI CAGTG 3 cut(s) 17, 978, 2208
Cac8I GCNNGC 4 cut(s) 1515, 1651, 1655, 1733
CaiI CAGNNNCTG 1 cut(s) 137
CfoI GCGC 2 cut(s) 918, 2367
Cfr10I RCCGGY 1 cut(s) 2185
Cfr13I GGNCC 2 cut(s) 212, 990
CseI GACGC 1 cut(s) 1361
Csp6I GTAC 1 cut(s) 2388
CspAI ACCGGT 1 cut(s) 2185
CviQI GTAC 1 cut(s) 2388
DdeI CTNAG 6 cut(s) 561, 1225, 1334, 1415, 1902, 2218
DraI TTTAAA 3 cut(s) 25, 364, 819
DriI GACNNNNNGTC 1 cut(s) 275
Eam1104I CTCTTC 2 cut(s) 1320, 1336
Eam1105I GACNNNNNGTC 1 cut(s) 275
EarI CTCTTC 2 cut(s) 1320, 1336
Eco130I CCWWGG 1 cut(s) 382
Eco31I GGTCTC 2 cut(s) 31, 467
Eco32I GATATC 1 cut(s) 2017
Eco47I GGWCC 2 cut(s) 212, 990
Eco57I CTGAAG 2 cut(s) 114, 2184
Eco91I GGTNACC 1 cut(s) 377
EcoO109I RGGNCCY 1 cut(s) 212
EcoO65I GGTNACC 1 cut(s) 377
EcoRII CCWGG 2 cut(s) 748, 1375
EcoRV GATATC 1 cut(s) 2017
EcoT14I CCWWGG 1 cut(s) 382
EcoT22I ATGCAT 1 cut(s) 2149
ErhI CCWWGG 1 cut(s) 382
Esp3I CGTCTC 1 cut(s) 2388
FalI AAGNNNNNCTT 4 cut(s) 140, 172, 2022, 2054
FaqI GGGAC 1 cut(s) 263
FbaI TGATCA 3 cut(s) 181, 1486, 1612
FblI GTMKAC 2 cut(s) 924, 2154
Fnu4HI GCNGC 4 cut(s) 620, 801, 804, 2342
FokI GGATG 6 cut(s) 131, 285, 947, 1709, 1772, 2284
Fsp4HI GCNGC 4 cut(s) 620, 801, 804, 2342
FspBI CTAG 4 cut(s) 692, 1074, 1205, 1514
GlaI GCGC 2 cut(s) 917, 2366
GluI GCNGC 4 cut(s) 620, 801, 804, 2342
GsuI CTGGAG 1 cut(s) 1006
HaeIII GGCC 1 cut(s) 936
HapII CCGG 1 cut(s) 2186
HgaI GACGC 1 cut(s) 1361
HhaI GCGC 2 cut(s) 918, 2367
Hin6I GCGC 2 cut(s) 916, 2365
HinP1I GCGC 2 cut(s) 916, 2365
HincII GTYRAC 2 cut(s) 765, 1243
HindII GTYRAC 2 cut(s) 765, 1243
HindIII AAGCTT 4 cut(s) 483, 501, 2036, 2159
HinfI GANTC 9 cut(s) 530, 554, 650, 656, 1351, 1575, 1747, 2064, 2239
HpaI GTTAAC 1 cut(s) 1243
HpaII CCGG 1 cut(s) 2186
HphI GGTGA 8 cut(s) 389, 404, 733, 762, 854, 1100, 1391, 1462
Hpy188I TCNGA 6 cut(s) 133, 655, 1491, 1870, 1903, 2008
Hpy99I CGWCG 5 cut(s) 147, 195, 198, 273, 1272
HpyAV CCTTC 4 cut(s) 138, 291, 718, 1826
HpyCH4III ACNGT 4 cut(s) 762, 990, 1849, 2382
HpyCH4IV ACGT 5 cut(s) 142, 196, 271, 1267, 1387
HpyF10VI GCNNNNNNNGC 1 cut(s) 1181
HpyF3I CTNAG 6 cut(s) 561, 1225, 1334, 1415, 1902, 2218
HpySE526I ACGT 5 cut(s) 142, 196, 271, 1267, 1387
HspAI GCGC 2 cut(s) 916, 2365
Ksp22I TGATCA 3 cut(s) 181, 1486, 1612
KspAI GTTAAC 1 cut(s) 1243
LguI GCTCTTC 1 cut(s) 1320
LmnI GCTCC 3 cut(s) 751, 1253, 1475
Lsp1109I GCAGC 3 cut(s) 790, 812, 2353
LweI GCATC 8 cut(s) 322, 532, 835, 969, 973, 1265, 2156, 2320
MaeI CTAG 4 cut(s) 692, 1074, 1205, 1514
MaeII ACGT 5 cut(s) 142, 196, 271, 1267, 1387
MaeIII GTNAC 4 cut(s) 377, 1228, 1576, 1968
MfeI CAATTG 1 cut(s) 2084
MlyI GAGTC 2 cut(s) 539, 1584
MmeI TCCRAC 3 cut(s) 436, 988, 1231
Mph1103I ATGCAT 1 cut(s) 2149
MroXI GAANNNNTTC 1 cut(s) 1314
MslI CAYNNNNRTG 2 cut(s) 375, 1323
MspA1I CMGCKG 1 cut(s) 803
MspCI CTTAAG 2 cut(s) 206, 1103
MspI CCGG 1 cut(s) 2186
MspR9I CCNGG 2 cut(s) 750, 1377
MunI CAATTG 1 cut(s) 2084
Mva1269I GAATGC 1 cut(s) 592
MvaI CCWGG 2 cut(s) 750, 1377
MvnI CGCG 1 cut(s) 2365
MwoI GCNNNNNNNGC 1 cut(s) 1181
NheI GCTAGC 1 cut(s) 1513
NlaIV GGNNCC 2 cut(s) 213, 1408
NmuCI GTSAC 2 cut(s) 377, 1576
NsiI ATGCAT 1 cut(s) 2149
NspI RCATGY 3 cut(s) 971, 1653, 2147
PaeI GCATGC 1 cut(s) 1653
PciI ACATGT 1 cut(s) 967
PciSI GCTCTTC 1 cut(s) 1320
PcsI WCGNNNNNNNCGW 1 cut(s) 148
PctI GAATGC 1 cut(s) 592
PdmI GAANNNNTTC 1 cut(s) 1314
PfeI GAWTC 7 cut(s) 554, 650, 656, 1351, 1747, 2064, 2239
PflMI CCANNNNNTGG 1 cut(s) 374
PfoI TCCNGGA 1 cut(s) 748
PinAI ACCGGT 1 cut(s) 2185
PkrI GCNGC 4 cut(s) 621, 802, 805, 2343
PleI GAGTC 2 cut(s) 538, 1583
PpsI GAGTC 2 cut(s) 538, 1583
PpuMI RGGWCCY 1 cut(s) 212
PscI ACATGT 1 cut(s) 967
PsiI TTATAA 1 cut(s) 794
Psp5II RGGWCCY 1 cut(s) 212
Psp6I CCWGG 2 cut(s) 748, 1375
PspEI GGTNACC 1 cut(s) 377
PspGI CCWGG 2 cut(s) 748, 1375
PspN4I GGNNCC 2 cut(s) 213, 1408
PspPI GGNCC 2 cut(s) 212, 990
PspPPI RGGWCCY 1 cut(s) 212
PstI CTGCAG 1 cut(s) 808
PstNI CAGNNNCTG 1 cut(s) 137
PvuII CAGCTG 1 cut(s) 803
RsaI GTAC 1 cut(s) 2389
RsaNI GTAC 1 cut(s) 2388
RseI CAYNNNNRTG 2 cut(s) 375, 1323
SapI GCTCTTC 1 cut(s) 1320
SatI GCNGC 4 cut(s) 620, 801, 804, 2342
Sau96I GGNCC 2 cut(s) 212, 990
SchI GAGTC 2 cut(s) 539, 1584
ScrFI CCNGG 2 cut(s) 750, 1377
SfaNI GCATC 8 cut(s) 322, 532, 835, 969, 973, 1265, 2156, 2320
SfcI CTRYAG 2 cut(s) 758, 804
SinI GGWCC 2 cut(s) 212, 990
SmiMI CAYNNNNRTG 2 cut(s) 375, 1323
SmlI CTYRAG 5 cut(s) 206, 527, 1103, 1367, 1776
SmoI CTYRAG 5 cut(s) 206, 527, 1103, 1367, 1776
SphI GCATGC 1 cut(s) 1653
SsiI CCGC 3 cut(s) 390, 619, 1950
SspI AATATT 1 cut(s) 175
SspMI CTAG 4 cut(s) 692, 1074, 1205, 1514
StyD4I CCNGG 2 cut(s) 748, 1375
StyI CCWWGG 1 cut(s) 382
TaaI ACNGT 4 cut(s) 762, 990, 1849, 2382
TaiI ACGT 5 cut(s) 145, 199, 274, 1270, 1390
TaqI TCGA 7 cut(s) 35, 145, 190, 226, 1051, 1282, 1828
TauI GCSGC 1 cut(s) 622
TfiI GAWTC 7 cut(s) 554, 650, 656, 1351, 1747, 2064, 2239
TscAI CASTG 3 cut(s) 17, 985, 2208
TseFI GTSAC 2 cut(s) 377, 1576
TseI GCWGC 3 cut(s) 800, 803, 2341
Tsp45I GTSAC 2 cut(s) 377, 1576
TspGWI ACGGA 2 cut(s) 1807, 1964
TspRI CASTG 3 cut(s) 17, 985, 2208
Van91I CCANNNNNTGG 1 cut(s) 374
Vha464I CTTAAG 2 cut(s) 206, 1103
VpaK11BI GGWCC 2 cut(s) 212, 990
XapI RAATTY 4 cut(s) 695, 1985, 2075, 2393
XbaI TCTAGA 1 cut(s) 691
XceI RCATGY 3 cut(s) 971, 1653, 2147
XmiI GTMKAC 2 cut(s) 924, 2154
XmnI GAANNNNTTC 1 cut(s) 1314
XspI CTAG 4 cut(s) 692, 1074, 1205, 1514
Zsp2I ATGCAT 1 cut(s) 2149
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.