FvH4_7g16871

Zinc finger MYM-type protein 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000122
Physical Location & Seq
Forward (+)
14427155 .. 14429194
2040 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g16871.t1

Sequence Viewer

Length: 1926 bp
ATGGAAAGGTTCTTTAAAAGGAAATCAGACATGTTGCAACCCCATGCAAATTGTGAAATATCAAAGGACATTCGTGTTGAGGCAGAGATAAATTTGTCAGAGCTACCATCAGATCCTGGATTGCGAAAGAAAATTTCAGACTACCCTTTGAGTATTCAAGACCAAGTTCGAAGAGTATATTTGCAAAGGGGTCCTTGTCAGCCTAAAGATCACAAATTTGTTAAGACCAAGTGTGGAGCTAAAGATCAAGCAGGTGGTGATGCTTTTAGTAGTAAGGGTTATCGGAATTGGAAGGAGAAATCAAGGCTATATGTTCATGTCGGAGACCTCAACAGCGCCCATAATCATGCTTTGAGAAAGTGTGAGGATCTCGTGAATGAAAGACAACACATTCGAAATATCATCAACAAGAATGCTAAGCAATCCAGAACAGATTATCGAATTTGCCTCACTGCATCAGTAGAATGTATACGGTTCCTTCTAAGACAAGGTCTTGCATTCCGGGGCCATGATGAGTCAGAAAATTCAAGCAATCAAGGTAACTTTGTTGAGCTTTTACAATTTCTTGCTGATCATGATGAACAAGTTAGAGCTGTGGCATTGAAAAACGCTCCAGCAAACCTCAAATTGACATCACCAACAATTCAGAAAGAGATAGTAAATGTTGCAGCAGATGCTATAATTAGAGACATAGATAATGCATTGTTCTCCATTCTAGTTGATGAAGCTAGAGATGTTTCTATAAAAGAGCAAATGGCTGTAATTTTTCGTTATGTGGATAAAAGGGGTTGTGTGATTGAACGTTTTATTGGCATTGTACATGTTGCCAATACCACTGCCAGAACACTCAAAAAAGCTGTAGATGAATTGCTTAGTAAGCATAAACTGAGCATATCAAGTTTACGTGGTCAAGGCTTCGATGGAGCAAGTAATATGAGTGGGGAACTAAATGGCTTAAAGACATTTATTTTGAAGGATAATCCCACTGCTTTCTATGTCCACTGTTTTGCACATCAGCTTCAGTTAGCTTTGGTGACTGTGGCAAAGAAACATAGTATTGTAGGTGCTTTCTTCACATCAGTTGCTAATGTTGTGAATATTGTTAGTGCCTCTTCCAAACGTCGAGACATTCTTCGAGAAAAGCAGGCTCTTAATGTTATTCAAGCATTGAAAGTTGGAGAACTTTCAAGTGGAAGAGGGTTAAATCAAGAAATTGAGATTAAACGTACAGCCGATACACGTTGGAGCTCACATTATGGTACGCTCATAAACTTTATAGCCTTGTTCCCTTCCATAGTTGATGTGCTAGATGAAATTGCAAATGACAAAGTAGGTTCTGATCAAAAAGATAATGCATACATTTCATTGGGGTTATTACAATCTTTTGATTACATATTTAGTTTGCATTTGATGAGGATTGTACTTGGTATTAGTCATGAGTTGTCCCAAGCATTGCAAAGAGATGATCAAGATATAGTAAATGCAATGGATTTAGTGAAAATATGCAAGAGAAAGTTGCAGGATTTGAGGGATAATGGATGGGATTCTTTACTAGACCAAGTTGTTATTTTTTGTGGCAAAGAGAATATCATGTTTCCCAACATGAGTGAGAAGCATATATGTAAAGGAAAATCAAAGCGGAAAAGTCCAGAAATCACAAACTTGCACTATTATCGTTTTGATTTCTTTTGTGCTGTGATAGATCTCCAACTTCAAGAGTTGAACAATCATTTCAATGAGGGTAATACAGAGCTACTCCTTTGTATTGCATGTTTGAGTCCGAATTATTCATTTTCTGCTTTCAACAAGGAACGTTTGATGCTTCTTGCTAGCTTTTATCCAACTGATTTTTCTACAACTGAGCTATTGTTACTGGAGTCACAGCTAGATATATATATATATATATATATATATATATATCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

642

Amino Acids

72.91

Weight (kDa)

8.57

Isoelectric Point (pI)

42.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 87 - 318 7.9e-79 Domain of unknown function (DUF4371)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19260 AT1G41920 AT1G42710 AT2G06541 AT2G06541 AT3G29450 AT3G29763 AT3G29765 AT3G31402 AT3G31402 AT4G09660
fragaria_vesca FvH4_1g22711 FvH4_3g10612 FvH4_3g23261 FvH4_3g31623 FvH4_3g33391 FvH4_3g37321 FvH4_3g43192 FvH4_3g43193 FvH4_4g00181 FvH4_4g00251 FvH4_4g08751 FvH4_4g15271 FvH4_5g27190 FvH4_6g02122 FvH4_6g26880 FvH4_6g35121 FvH4_7g16871 FvH4_7g19080 FvH4_7g30071
malus_domestica MD02G1162100.v1.1 MD03G1081700.v1.1 MD09G1280500.v1.1 MD12G1083800.v1.1 MD12G1128200.v1.1
prunus_persica Prupe.7G129800_v2.0.a1
pyrus_communis pycom01g08000 pycom02g13840 pycom02g18030 pycom04g01290 pycom04g12580 pycom05g02550 pycom05g06740 pycom05g26200 pycom07g09850 pycom08g10610 pycom10g11280 pycom11g12580 pycom11g22260 pycom12g18440 pycom13g20080 pycom15g25600 pycom16g23600 pycom17g10070
rosa_chinensis RchiOBHm_Chr1g0313551 RchiOBHm_Chr1g0364331 RchiOBHm_Chr1g0369741 RchiOBHm_Chr1g0380371 RchiOBHm_Chr2g0097391 RchiOBHm_Chr2g0113561 RchiOBHm_Chr2g0114151 RchiOBHm_Chr2g0119761 RchiOBHm_Chr2g0149851 RchiOBHm_Chr2g0151931 RchiOBHm_Chr2g0166411 RchiOBHm_Chr3g0453661 RchiOBHm_Chr3g0466101 RchiOBHm_Chr3g0477911 RchiOBHm_Chr3g0486441 RchiOBHm_Chr4g0390161 RchiOBHm_Chr4g0392191 RchiOBHm_Chr4g0414461 RchiOBHm_Chr4g0421421 RchiOBHm_Chr5g0023801 RchiOBHm_Chr5g0040121 RchiOBHm_Chr5g0045381 RchiOBHm_Chr5g0061511 RchiOBHm_Chr5g0062621 RchiOBHm_Chr5g0064161 RchiOBHm_Chr5g0068711 RchiOBHm_Chr6g0246041 RchiOBHm_Chr6g0252511 RchiOBHm_Chr6g0252521 RchiOBHm_Chr6g0263361 RchiOBHm_Chr6g0269451 RchiOBHm_Chr6g0275351 RchiOBHm_Chr6g0288481 RchiOBHm_Chr6g0310011 RchiOBHm_Chr6g0310021 RchiOBHm_Chr7g0223071 RchiOBHm_Chr7g0227621 RchiOBHm_Chr7g0242581
rosa_laevigata RLG00000033957
rosa_multiflora Rmu_co8455865.1_g000001 Rmu_sc0000021.1_g000011 Rmu_sc0000079.1_g000049 Rmu_sc0000087.1_g000015 Rmu_sc0000151.1_g000008 Rmu_sc0000365.1_g000014 Rmu_sc0000446.1_g000054 Rmu_sc0000446.1_g000055 Rmu_sc0000534.1_g000006 Rmu_sc0000724.1_g000020 Rmu_sc0000859.1_g000001 Rmu_sc0000876.1_g000002 Rmu_sc0000881.1_g000005 Rmu_sc0000929.1_g000014 Rmu_sc0001112.1_g000004 Rmu_sc0001136.1_g000009 Rmu_sc0001353.1_g000064 Rmu_sc0001662.1_g000005 Rmu_sc0001764.1_g000006 Rmu_sc0001982.1_g000015 Rmu_sc0002052.1_g000008 Rmu_sc0002052.1_g000009 Rmu_sc0002158.1_g000011 Rmu_sc0002285.1_g000005 Rmu_sc0002983.1_g000025 Rmu_sc0003063.1_g000006 Rmu_sc0003076.1_g000005 Rmu_sc0003221.1_g000053 Rmu_sc0003382.1_g000010 Rmu_sc0003733.1_g000054 Rmu_sc0003997.1_g000005 Rmu_sc0004283.1_g000008 Rmu_sc0004283.1_g000053 Rmu_sc0004509.1_g000007 Rmu_sc0004540.1_g000028 Rmu_sc0004657.1_g000005 Rmu_sc0004935.1_g000006 Rmu_sc0005072.1_g000003 Rmu_sc0005248.1_g000001 Rmu_sc0006161.1_g000001 Rmu_sc0006209.1_g000005 Rmu_sc0006576.1_g000018 Rmu_sc0006576.1_g000019 Rmu_sc0007121.1_g000016 Rmu_sc0007121.1_g000032 Rmu_sc0007753.1_g000016 Rmu_sc0007795.1_g000009 Rmu_sc0007841.1_g000019 Rmu_sc0008339.1_g000021 Rmu_sc0008339.1_g000022 Rmu_sc0008432.1_g000001 Rmu_sc0008633.1_g000009 Rmu_sc0009104.1_g000013 Rmu_sc0011469.1_g000001 Rmu_sc0012039.1_g000001 Rmu_sc0013947.1_g000007 Rmu_sc0015560.1_g000001 Rmu_sc0017369.1_g000001 Rmu_sc0021648.1_g000001 Rmu_sc0022867.1_g000003 Rmu_sc0027801.1_g000001 Rmu_sc0027801.1_g000002 Rmu_sc0029861.1_g000001 Rmu_sc0030314.1_g000001 Rmu_sc0040149.1_g000001 Rmu_ssc0000089.1_g000028 Rmu_ssc0000480.1_g000033
rosa_roxburghii Rroxscaffold_1G00002540 Rroxscaffold_1G00013960 Rroxscaffold_1G00041160 Rroxscaffold_1G00045580 Rroxscaffold_3G00247310 Rroxscaffold_3G00267070 Rroxscaffold_4G00313830 Rroxscaffold_5G00372270 Rroxscaffold_6G00404800 Rroxscaffold_6G00406090
rosa_rugosa Rorug03G0269800 Rorug04G0142900 Rorug04G0152600 Rorug05G0223300.1 Rorug05G0266400 Rorug06G0008900 Rorug07G0086000 Rorug07G0205800 Rorug07G0270900
rosa_wichuraiana Rw0G001600 Rw0G017220 Rw0G017620 Rw0G018380 Rw1G002320 Rw1G020940 Rw1G021200 Rw1G022610 Rw1G038680 Rw2G013320 Rw2G016850 Rw2G024020 Rw2G025210 Rw2G032270 Rw2G039490 Rw2G041630 Rw2G048450 Rw2G051510 Rw3G025320 Rw4G003260 Rw4G007300 Rw4G009290 Rw4G010910 Rw4G013260 Rw5G008190 Rw5G008290 Rw5G018740 Rw5G023640 Rw5G028800 Rw5G031830 Rw5G041280 Rw5G044050 Rw6G007060 Rw6G008230 Rw6G009960 Rw6G013460 Rw6G014610 Rw6G017780 Rw6G033200 Rw7G021340 Rw7G023750 Rw7G032290 Rw7G032450 Rw7G033880 Rw7G038580 Rw7G040180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 242
Acc36I ACCTGC 1 cut(s) 242
AccI GTMKAC 1 cut(s) 469
AciI CCGC 1 cut(s) 1639
AclI AACGTT 2 cut(s) 802, 1813
AclWI GGATC 2 cut(s) 107, 375
AcsI RAATTY 5 cut(s) 91, 132, 215, 441, 523
AcuI CTGAAG 1 cut(s) 1004
AfaI GTAC 4 cut(s) 819, 1228, 1261, 1422
AflIII ACRYGT 3 cut(s) 30, 820, 1238
AjnI CCWGG 1 cut(s) 115
AjuI GAANNNNNNNTTGG 4 cut(s) 792, 824, 1834, 1866
Alw21I GWGCWC 1 cut(s) 1250
Alw26I GTCTC 3 cut(s) 318, 681, 1119
AlwI GGATC 2 cut(s) 107, 375
AlwNI CAGNNNCTG 1 cut(s) 116
AoxI GGCC 1 cut(s) 505
ApeKI GCWGC 1 cut(s) 668
ApoI RAATTY 5 cut(s) 91, 132, 215, 441, 523
ArsI GACNNNNNNTTYG 4 cut(s) 375, 407, 952, 984
AspLEI GCGC 1 cut(s) 338
AspS9I GGNCC 2 cut(s) 191, 505
AsuC2I CCSGG 1 cut(s) 503
AsuHPI GGTGA 3 cut(s) 269, 627, 1045
AsuII TTCGAA 2 cut(s) 169, 394
AsuNHI GCTAGC 1 cut(s) 1829
AvaII GGWCC 1 cut(s) 191
BanII GRGCYC 1 cut(s) 1250
BauI CACGAG 1 cut(s) 371
Bbv12I GWGCWC 1 cut(s) 1250
BbvI GCAGC 1 cut(s) 680
BccI CCATC 3 cut(s) 115, 914, 1533
BcgI CGANNNNNNTGC 2 cut(s) 1655, 1689
BciT130I CCWGG 1 cut(s) 117
BclI TGATCA 3 cut(s) 571, 1339, 1465
BcnI CCSGG 1 cut(s) 503
BcoDI GTCTC 3 cut(s) 318, 681, 1119
BfaI CTAG 6 cut(s) 716, 729, 1307, 1553, 1830, 1886
BfmI CTRYAG 1 cut(s) 858
BfoI RGCGCY 1 cut(s) 339
BfuAI ACCTGC 1 cut(s) 242
BglII AGATCT 1 cut(s) 1702
BisI GCNGC 1 cut(s) 669
BlpI GCTNAGC 1 cut(s) 417
BlsI GCNGC 1 cut(s) 670
Bme1390I CCNGG 2 cut(s) 117, 503
Bme18I GGWCC 1 cut(s) 191
BmgT120I GGNCC 2 cut(s) 191, 505
BmiI GGNNCC 3 cut(s) 192, 476, 506
BmrFI CCNGG 2 cut(s) 117, 503
BmsI GCATC 4 cut(s) 250, 464, 664, 1809
BmtI GCTAGC 1 cut(s) 1833
BpmI CTGGAG 2 cut(s) 597, 1895
Bpu1102I GCTNAGC 1 cut(s) 417
Bpu14I TTCGAA 2 cut(s) 169, 394
BpuMI CCSGG 1 cut(s) 503
Bsa29I ATCGAT 1 cut(s) 1921
BsaAI YACGTR 1 cut(s) 905
BsaI GGTCTC 1 cut(s) 318
BsaJI CCNNGG 1 cut(s) 502
Bse1I ACTGG 1 cut(s) 1878
Bse3DI GCAATG 2 cut(s) 1451, 1491
BseBI CCWGG 1 cut(s) 117
BseCI ATCGAT 1 cut(s) 1921
BseDI CCNNGG 1 cut(s) 502
BseGI GGATG 1 cut(s) 1544
BseMI GCAATG 2 cut(s) 1451, 1491
BseMII CTCAG 2 cut(s) 878, 1851
BseNI ACTGG 1 cut(s) 1878
BseXI GCAGC 1 cut(s) 680
BshFI GGCC 1 cut(s) 507
BshVI ATCGAT 1 cut(s) 1921
BsiHKAI GWGCWC 1 cut(s) 1250
BsiSI CCGG 1 cut(s) 502
BslFI GGGAC 1 cut(s) 1429
BsmAI GTCTC 3 cut(s) 318, 681, 1119
BsmFI GGGAC 1 cut(s) 1429
BsmI GAATGC 2 cut(s) 418, 497
BsnI GGCC 1 cut(s) 507
Bso31I GGTCTC 1 cut(s) 318
Bsp119I TTCGAA 2 cut(s) 169, 394
Bsp1286I GDGCHC 1 cut(s) 1250
Bsp1407I TGTACA 1 cut(s) 817
Bsp143I GATC 8 cut(s) 112, 208, 244, 367, 571, 1339, 1465, 1702
Bsp1720I GCTNAGC 1 cut(s) 417
BspACI CCGC 1 cut(s) 1639
BspANI GGCC 1 cut(s) 507
BspCNI CTCAG 2 cut(s) 879, 1852
BspDI ATCGAT 1 cut(s) 1921
BspHI TCATGA 2 cut(s) 574, 1435
BspLI GGNNCC 3 cut(s) 192, 476, 506
BspMI ACCTGC 1 cut(s) 242
BspOI GCTAGC 1 cut(s) 1833
BspPI GGATC 2 cut(s) 107, 375
BspT104I TTCGAA 2 cut(s) 169, 394
BspTNI GGTCTC 1 cut(s) 318
BsrDI GCAATG 2 cut(s) 1451, 1491
BsrGI TGTACA 1 cut(s) 817
BsrI ACTGG 1 cut(s) 1878
BssECI CCNNGG 1 cut(s) 502
BssMI GATC 8 cut(s) 112, 208, 244, 367, 571, 1339, 1465, 1702
BssNAI GTATAC 1 cut(s) 470
BssSI CACGAG 1 cut(s) 371
Bst1107I GTATAC 1 cut(s) 470
Bst2BI CACGAG 1 cut(s) 371
Bst2UI CCWGG 1 cut(s) 117
Bst4CI ACNGT 3 cut(s) 474, 1004, 1039
Bst6I CTCTTC 3 cut(s) 166, 1117, 1189
BstAPI GCANNNNNTGC 1 cut(s) 674
BstAUI TGTACA 1 cut(s) 817
BstBAI YACGTR 1 cut(s) 905
BstBI TTCGAA 2 cut(s) 169, 394
BstC8I GCNNGC 2 cut(s) 1146, 1831
BstDEI CTNAG 5 cut(s) 417, 482, 872, 887, 1860
BstF5I GGATG 1 cut(s) 1544
BstH2I RGCGCY 1 cut(s) 339
BstHHI GCGC 1 cut(s) 338
BstKTI GATC 8 cut(s) 115, 211, 247, 370, 574, 1342, 1468, 1705
BstMAI GTCTC 3 cut(s) 318, 681, 1119
BstMBI GATC 8 cut(s) 112, 208, 244, 367, 571, 1339, 1465, 1702
BstMWI GCNNNNNNNGC 2 cut(s) 674, 877
BstNI CCWGG 1 cut(s) 117
BstNSI RCATGY 3 cut(s) 34, 824, 1773
BstSCI CCNGG 2 cut(s) 115, 501
BstSFI CTRYAG 1 cut(s) 858
BstV1I GCAGC 1 cut(s) 680
BstX2I RGATCY 3 cut(s) 112, 367, 1702
BstYI RGATCY 3 cut(s) 112, 367, 1702
BstZ17I GTATAC 1 cut(s) 470
Bsu15I ATCGAT 1 cut(s) 1921
BsuRI GGCC 1 cut(s) 507
BsuTUI ATCGAT 1 cut(s) 1921
BtsCI GGATG 1 cut(s) 1544
BtsI GCAGTG 3 cut(s) 450, 834, 984
BtsIMutI CAGTG 4 cut(s) 450, 834, 984, 1000
BveI ACCTGC 1 cut(s) 242
Cac8I GCNNGC 2 cut(s) 1146, 1831
CaiI CAGNNNCTG 1 cut(s) 116
CciI TCATGA 2 cut(s) 574, 1435
CfoI GCGC 1 cut(s) 338
Cfr13I GGNCC 2 cut(s) 191, 505
ClaI ATCGAT 1 cut(s) 1921
Csp6I GTAC 4 cut(s) 818, 1227, 1260, 1421
CviQI GTAC 4 cut(s) 818, 1227, 1260, 1421
DdeI CTNAG 5 cut(s) 417, 482, 872, 887, 1860
DpnI GATC 8 cut(s) 114, 210, 246, 369, 573, 1341, 1467, 1704
DpnII GATC 8 cut(s) 112, 208, 244, 367, 571, 1339, 1465, 1702
DraI TTTAAA 1 cut(s) 16
Eam1104I CTCTTC 3 cut(s) 166, 1117, 1189
EarI CTCTTC 3 cut(s) 166, 1117, 1189
Ecl136II GAGCTC 1 cut(s) 1248
Eco24I GRGCYC 1 cut(s) 1250
Eco31I GGTCTC 1 cut(s) 318
Eco47I GGWCC 1 cut(s) 191
Eco53kI GAGCTC 1 cut(s) 1248
Eco57I CTGAAG 1 cut(s) 1004
EcoICRI GAGCTC 1 cut(s) 1248
EcoO109I RGGNCCY 1 cut(s) 191
EcoRII CCWGG 1 cut(s) 115
EcoT22I ATGCAT 2 cut(s) 703, 1357
EcoT38I GRGCYC 1 cut(s) 1250
FalI AAGNNNNNCTT 2 cut(s) 178, 210
FaqI GGGAC 1 cut(s) 1429
FbaI TGATCA 3 cut(s) 571, 1339, 1465
FblI GTMKAC 1 cut(s) 469
Fnu4HI GCNGC 1 cut(s) 669
FokI GGATG 1 cut(s) 1551
FriOI GRGCYC 1 cut(s) 1250
Fsp4HI GCNGC 1 cut(s) 669
FspBI CTAG 6 cut(s) 716, 729, 1307, 1553, 1830, 1886
GlaI GCGC 1 cut(s) 337
GluI GCNGC 1 cut(s) 669
GsuI CTGGAG 2 cut(s) 597, 1895
HaeII RGCGCY 1 cut(s) 339
HaeIII GGCC 1 cut(s) 507
HapII CCGG 1 cut(s) 502
HhaI GCGC 1 cut(s) 338
Hin6I GCGC 1 cut(s) 336
HinP1I GCGC 1 cut(s) 336
HinfI GANTC 4 cut(s) 515, 1544, 1777, 1877
HpaII CCGG 1 cut(s) 502
HphI GGTGA 3 cut(s) 269, 627, 1045
Hpy166II GTNNAC 3 cut(s) 470, 902, 1000
Hpy8I GTNNAC 3 cut(s) 470, 902, 1000
Hpy99I CGWCG 1 cut(s) 1125
HpyAV CCTTC 4 cut(s) 286, 488, 967, 1299
HpyCH4III ACNGT 3 cut(s) 474, 1004, 1039
HpyCH4IV ACGT 6 cut(s) 802, 904, 1120, 1225, 1240, 1813
HpyF10VI GCNNNNNNNGC 2 cut(s) 674, 877
HpyF3I CTNAG 5 cut(s) 417, 482, 872, 887, 1860
HpySE526I ACGT 6 cut(s) 802, 904, 1120, 1225, 1240, 1813
HspAI GCGC 1 cut(s) 336
Ksp22I TGATCA 3 cut(s) 571, 1339, 1465
Kzo9I GATC 8 cut(s) 112, 208, 244, 367, 571, 1339, 1465, 1702
LmnI GCTCC 4 cut(s) 236, 616, 923, 1245
Lsp1109I GCAGC 1 cut(s) 680
LweI GCATC 4 cut(s) 250, 464, 664, 1809
MaeI CTAG 6 cut(s) 716, 729, 1307, 1553, 1830, 1886
MaeII ACGT 6 cut(s) 802, 904, 1120, 1225, 1240, 1813
MaeIII GTNAC 4 cut(s) 539, 1033, 1869, 1878
MalI GATC 8 cut(s) 114, 210, 246, 369, 573, 1341, 1467, 1704
MboI GATC 8 cut(s) 112, 208, 244, 367, 571, 1339, 1465, 1702
MboII GAAGA 5 cut(s) 183, 1063, 1104, 1124, 1206
MflI RGATCY 3 cut(s) 112, 367, 1702
MhlI GDGCHC 1 cut(s) 1250
MlyI GAGTC 3 cut(s) 524, 1786, 1886
MmeI TCCRAC 5 cut(s) 301, 1156, 1223, 1732, 1865
Mph1103I ATGCAT 2 cut(s) 703, 1357
MseI TTAA 6 cut(s) 15, 222, 956, 1152, 1202, 1221
MslI CAYNNNNRTG 2 cut(s) 345, 1734
MspI CCGG 1 cut(s) 502
MspR9I CCNGG 2 cut(s) 117, 503
Mva1269I GAATGC 2 cut(s) 418, 497
MvaI CCWGG 1 cut(s) 117
MwoI GCNNNNNNNGC 2 cut(s) 674, 877
NciI CCSGG 1 cut(s) 503
NdeII GATC 8 cut(s) 112, 208, 244, 367, 571, 1339, 1465, 1702
NheI GCTAGC 1 cut(s) 1829
NlaIV GGNNCC 3 cut(s) 192, 476, 506
NmuCI GTSAC 2 cut(s) 1033, 1878
NsiI ATGCAT 2 cut(s) 703, 1357
NspI RCATGY 3 cut(s) 34, 824, 1773
NspV TTCGAA 2 cut(s) 169, 394
PagI TCATGA 2 cut(s) 574, 1435
PaqCI CACCTGC 1 cut(s) 242
PciI ACATGT 2 cut(s) 30, 820
PctI GAATGC 2 cut(s) 418, 497
PfeI GAWTC 1 cut(s) 1544
PflFI GACNNNGTC 1 cut(s) 489
PfoI TCCNGGA 1 cut(s) 115
PkrI GCNGC 1 cut(s) 670
PleI GAGTC 3 cut(s) 523, 1785, 1885
PpsI GAGTC 3 cut(s) 523, 1785, 1885
Ppu21I YACGTR 1 cut(s) 905
PpuMI RGGWCCY 1 cut(s) 191
PscI ACATGT 2 cut(s) 30, 820
Psp124BI GAGCTC 1 cut(s) 1250
Psp1406I AACGTT 2 cut(s) 802, 1813
Psp5II RGGWCCY 1 cut(s) 191
Psp6I CCWGG 1 cut(s) 115
PspGI CCWGG 1 cut(s) 115
PspN4I GGNNCC 3 cut(s) 192, 476, 506
PspPI GGNCC 2 cut(s) 191, 505
PspPPI RGGWCCY 1 cut(s) 191
PstNI CAGNNNCTG 1 cut(s) 116
PsuI RGATCY 3 cut(s) 112, 367, 1702
PsyI GACNNNGTC 1 cut(s) 489
RsaI GTAC 4 cut(s) 819, 1228, 1261, 1422
RsaNI GTAC 4 cut(s) 818, 1227, 1260, 1421
RseI CAYNNNNRTG 2 cut(s) 345, 1734
SacI GAGCTC 1 cut(s) 1250
SaqAI TTAA 6 cut(s) 15, 222, 956, 1152, 1202, 1221
SatI GCNGC 1 cut(s) 669
Sau3AI GATC 8 cut(s) 112, 208, 244, 367, 571, 1339, 1465, 1702
Sau96I GGNCC 2 cut(s) 191, 505
SchI GAGTC 3 cut(s) 524, 1786, 1886
ScrFI CCNGG 2 cut(s) 117, 503
SduI GDGCHC 1 cut(s) 1250
SfaNI GCATC 4 cut(s) 250, 464, 664, 1809
SfcI CTRYAG 1 cut(s) 858
SfuI TTCGAA 2 cut(s) 169, 394
SinI GGWCC 1 cut(s) 191
SmiMI CAYNNNNRTG 2 cut(s) 345, 1734
SsiI CCGC 1 cut(s) 1639
SspI AATATT 1 cut(s) 1099
SspMI CTAG 6 cut(s) 716, 729, 1307, 1553, 1830, 1886
SstI GAGCTC 1 cut(s) 1250
StyD4I CCNGG 2 cut(s) 115, 501
TaaI ACNGT 3 cut(s) 474, 1004, 1039
TaiI ACGT 6 cut(s) 805, 907, 1123, 1228, 1243, 1816
TaqI TCGA 7 cut(s) 169, 394, 439, 918, 1123, 1135, 1921
TatI WGTACW 2 cut(s) 817, 1420
TfiI GAWTC 1 cut(s) 1544
Tru1I TTAA 6 cut(s) 15, 222, 956, 1152, 1202, 1221
Tru9I TTAA 6 cut(s) 15, 222, 956, 1152, 1202, 1221
TscAI CASTG 4 cut(s) 457, 841, 991, 1007
TseFI GTSAC 2 cut(s) 1033, 1878
TseI GCWGC 1 cut(s) 668
Tsp45I GTSAC 2 cut(s) 1033, 1878
TspDTI ATGAA 8 cut(s) 305, 393, 594, 738, 879, 1326, 1353, 1779
TspRI CASTG 4 cut(s) 457, 841, 991, 1007
Tth111I GACNNNGTC 1 cut(s) 489
VpaK11BI GGWCC 1 cut(s) 191
XapI RAATTY 5 cut(s) 91, 132, 215, 441, 523
XceI RCATGY 3 cut(s) 34, 824, 1773
XmiI GTMKAC 1 cut(s) 469
XspI CTAG 6 cut(s) 716, 729, 1307, 1553, 1830, 1886
Zsp2I ATGCAT 2 cut(s) 703, 1357
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.