Rw6G008230

Zinc finger MYM-type protein 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000122
Physical Location & Seq
Reverse (-)
13972447 .. 13974831
2385 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G008230.1

Sequence Viewer

Length: 2250 bp
ATGTTAAGATACTTTAAAAGAAAAGAAAATTCTGGTGCAGAGGAGTCGTCGGGTATAAATACCTCATTGGAGCCATCCCCTGCAAAAAAAACAAAGAAGAATGATAGTAATTCAGAGAAGCCTTGTCCGGAATTTAATGAAAAATATCCTCCTGATCCTGGAAATCGTCCTCCAATTTCAAGCTATCATTCTAATGTTCAAGATGAAGTACGCAGATATTATCTACAAAAAGGTCCTTGTCAACCTAGACCTCACGAGTTTCCTATCACAGAATTTGGGAGAAAGAAAAGAAGATTTGTTAAAGAGTGGTTTGATGATTTTCCTACTTGGTTAGAGTACAGCATAAAAAACGATGCTGCATATTGTCTATGTTGTTATCTTTTTAAACAAGGAGGTGGTGATGCTTTTGTGGGTGATGGATTTAAGAACTGGAAGAAGAAGAGTATAGTATATGGTCATGTTGGAGGGCCAAACAGTACCCATAACGAGGCTCAGAGAAACTGTGACGCATTACTAAATCAAAAACAACAGATTGAAACCATATTGTCAAATCATACAAGCCAAGATCGGATTGACTATCGGATTCGCTTAAGTGCATCAATCGGTGTTGTTAGAATTCTTTTGAAGCAAGGACTTCCATTTCATGGGCATGATGAATCTGAAAATTCAAATAATCGAGGAAACTTTCTTGAAATTTTGGAATGGTTATGCGGTTATAATGAAGATATAAAAGCTGTCACATTGAAAAATGCTTCTGAAAATTTGAAGTTAACATCACCTGATATTCAAAAGGACATTGTAAGTGCTATTTCAGTTGAAATTGTCAATACAATTGCTAGTGAACTTGGTGATTCTTTATTTACCATTCTTGTTGATGAATCTCGAGATATGTCCTCAAAGGAGCAAATGGCCATTGTACTACGGTATGTGGATGATGGAAAGGTGATTGAGCGTTTTGTAGGTATTGAGCATGTTACGAATACCAATGCTATCACACTGAAGGAAGCTATTGATGATTTTTTAAGTCAAGGATATGACGGAGCAAGTAATATGAGAGGTGAGCTGAATGGTTTGAAAACACTTATTTTGAATGAAAATAAATGTGCCTTTTATGTGCATTGTTTTGCTCATCAACTACAATTAGCTTTGGTAGCAGTGGCCAAGAATCATGATTTGGTTTCAGATTTCTTTACTTTGGTTGCTAATGTGGTGAATGTGGTTGGAGCGTCAGCTAAAAGACGAGACATTCTTCAAGAAAAACATGGTGATGACATATTAGAAGCACTAGAAAACAATGAGCTTTCAAGTGGTCAAGGCTTGAATCAGGAAACTAGTGTGAAGCGAACTACTGTACTCGAGGTTGTCAGAATGGATGGAACAAGTTCTGAACAAAAGCTAGAAGCAAGGGTTTTATTGGATTATATGCGATCATATGAATTCTTTTTCTGTCTACACTTGATGAGAAAAGTGTTGGGAATCACAAACGATTTGTCAAAAGCATTGCAAAAGAAAGATCAAGATATTGTGAATGCTATGAACTTGGTTACTGTATGCAAGGAACGATTGCAAGCAATGAGAGAGAGTGGTTGGGATTCTTTACTCACACAAATTGCAGTTTTTTGTGAGAAGCATTCTATTAAAGTTCTAAACATGGATGAATGCTATTCAGCTCAAGGGAAATCAAAGTGCAATGCTCAAGTGATCACAAACTTGCATCATTATCGTCTTCAAGAGTTGGATGATCGTTTCAATGAGAAGAATACTGAGTTGCTTCTTTGTATGTCATGTTTGAACCCGAGAAATTCATTCTCAGCTTTTGACAAAGAAAAGCTGATAAAGCTGGCCCAATATTATCCTCAGGATTTTTCTGCACATGATCTAGAGGTACTAGATGATCAACTTGAAAATTACATAGTGGACATGCGCTCCAACATTGAGTTTTCTGAATTGAAGGGAATTACTGATCTTGCACAAAAGATGGTTCAGACCAAAAAAGATGTGACATATCCACTGGTGTACTTGCTTGTGACATTAGCATTGATTTTACCAGTTGCAACTGCAAGTGTAGAGAGAGTATTTTCTGCTATGAATATTGTGAAGACTCGTTTACGTAGTCGAATGGGTGACGAGTTTATGAATGATTGCTTGATTTCATATATTGAGAAAGACATTTTTACTAGTATAGATGATGAGACTATCATGCAACGATTTCAAAATATGAAATCTCGTCGAGGACAATTGCCATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

749

Amino Acids

85.39

Weight (kDa)

5.95

Isoelectric Point (pI)

38.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 134 - 357 6.5e-65 Domain of unknown function (DUF4371)
Dimer_Tnp_hAT PF05699 665 - 723 8.2e-08 hAT family C-terminal dimerisation region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19260 AT1G41920 AT1G42710 AT2G06541 AT2G06541 AT3G29450 AT3G29763 AT3G29765 AT3G31402 AT3G31402 AT4G09660
fragaria_vesca FvH4_1g22711 FvH4_3g10612 FvH4_3g23261 FvH4_3g31623 FvH4_3g33391 FvH4_3g37321 FvH4_3g43192 FvH4_3g43193 FvH4_4g00181 FvH4_4g00251 FvH4_4g08751 FvH4_4g15271 FvH4_5g27190 FvH4_6g02122 FvH4_6g26880 FvH4_6g35121 FvH4_7g16871 FvH4_7g19080 FvH4_7g30071
malus_domestica MD02G1162100.v1.1 MD03G1081700.v1.1 MD09G1280500.v1.1 MD12G1083800.v1.1 MD12G1128200.v1.1
prunus_persica Prupe.7G129800_v2.0.a1
pyrus_communis pycom01g08000 pycom02g13840 pycom02g18030 pycom04g01290 pycom04g12580 pycom05g02550 pycom05g06740 pycom05g26200 pycom07g09850 pycom08g10610 pycom10g11280 pycom11g12580 pycom11g22260 pycom12g18440 pycom13g20080 pycom15g25600 pycom16g23600 pycom17g10070
rosa_chinensis RchiOBHm_Chr1g0313551 RchiOBHm_Chr1g0364331 RchiOBHm_Chr1g0369741 RchiOBHm_Chr1g0380371 RchiOBHm_Chr2g0097391 RchiOBHm_Chr2g0113561 RchiOBHm_Chr2g0114151 RchiOBHm_Chr2g0119761 RchiOBHm_Chr2g0149851 RchiOBHm_Chr2g0151931 RchiOBHm_Chr2g0166411 RchiOBHm_Chr3g0453661 RchiOBHm_Chr3g0466101 RchiOBHm_Chr3g0477911 RchiOBHm_Chr3g0486441 RchiOBHm_Chr4g0390161 RchiOBHm_Chr4g0392191 RchiOBHm_Chr4g0414461 RchiOBHm_Chr4g0421421 RchiOBHm_Chr5g0023801 RchiOBHm_Chr5g0040121 RchiOBHm_Chr5g0045381 RchiOBHm_Chr5g0061511 RchiOBHm_Chr5g0062621 RchiOBHm_Chr5g0064161 RchiOBHm_Chr5g0068711 RchiOBHm_Chr6g0246041 RchiOBHm_Chr6g0252511 RchiOBHm_Chr6g0252521 RchiOBHm_Chr6g0263361 RchiOBHm_Chr6g0269451 RchiOBHm_Chr6g0275351 RchiOBHm_Chr6g0288481 RchiOBHm_Chr6g0310011 RchiOBHm_Chr6g0310021 RchiOBHm_Chr7g0223071 RchiOBHm_Chr7g0227621 RchiOBHm_Chr7g0242581
rosa_laevigata RLG00000033957
rosa_multiflora Rmu_co8455865.1_g000001 Rmu_sc0000021.1_g000011 Rmu_sc0000079.1_g000049 Rmu_sc0000087.1_g000015 Rmu_sc0000151.1_g000008 Rmu_sc0000365.1_g000014 Rmu_sc0000446.1_g000054 Rmu_sc0000446.1_g000055 Rmu_sc0000534.1_g000006 Rmu_sc0000724.1_g000020 Rmu_sc0000859.1_g000001 Rmu_sc0000876.1_g000002 Rmu_sc0000881.1_g000005 Rmu_sc0000929.1_g000014 Rmu_sc0001112.1_g000004 Rmu_sc0001136.1_g000009 Rmu_sc0001353.1_g000064 Rmu_sc0001662.1_g000005 Rmu_sc0001764.1_g000006 Rmu_sc0001982.1_g000015 Rmu_sc0002052.1_g000008 Rmu_sc0002052.1_g000009 Rmu_sc0002158.1_g000011 Rmu_sc0002285.1_g000005 Rmu_sc0002983.1_g000025 Rmu_sc0003063.1_g000006 Rmu_sc0003076.1_g000005 Rmu_sc0003221.1_g000053 Rmu_sc0003382.1_g000010 Rmu_sc0003733.1_g000054 Rmu_sc0003997.1_g000005 Rmu_sc0004283.1_g000008 Rmu_sc0004283.1_g000053 Rmu_sc0004509.1_g000007 Rmu_sc0004540.1_g000028 Rmu_sc0004657.1_g000005 Rmu_sc0004935.1_g000006 Rmu_sc0005072.1_g000003 Rmu_sc0005248.1_g000001 Rmu_sc0006161.1_g000001 Rmu_sc0006209.1_g000005 Rmu_sc0006576.1_g000018 Rmu_sc0006576.1_g000019 Rmu_sc0007121.1_g000016 Rmu_sc0007121.1_g000032 Rmu_sc0007753.1_g000016 Rmu_sc0007795.1_g000009 Rmu_sc0007841.1_g000019 Rmu_sc0008339.1_g000021 Rmu_sc0008339.1_g000022 Rmu_sc0008432.1_g000001 Rmu_sc0008633.1_g000009 Rmu_sc0009104.1_g000013 Rmu_sc0011469.1_g000001 Rmu_sc0012039.1_g000001 Rmu_sc0013947.1_g000007 Rmu_sc0015560.1_g000001 Rmu_sc0017369.1_g000001 Rmu_sc0021648.1_g000001 Rmu_sc0022867.1_g000003 Rmu_sc0027801.1_g000001 Rmu_sc0027801.1_g000002 Rmu_sc0029861.1_g000001 Rmu_sc0030314.1_g000001 Rmu_sc0040149.1_g000001 Rmu_ssc0000089.1_g000028 Rmu_ssc0000480.1_g000033
rosa_roxburghii Rroxscaffold_1G00002540 Rroxscaffold_1G00013960 Rroxscaffold_1G00041160 Rroxscaffold_1G00045580 Rroxscaffold_3G00247310 Rroxscaffold_3G00267070 Rroxscaffold_4G00313830 Rroxscaffold_5G00372270 Rroxscaffold_6G00404800 Rroxscaffold_6G00406090
rosa_rugosa Rorug03G0269800 Rorug04G0142900 Rorug04G0152600 Rorug05G0223300.1 Rorug05G0266400 Rorug06G0008900 Rorug07G0086000 Rorug07G0205800 Rorug07G0270900
rosa_wichuraiana Rw0G001600 Rw0G017220 Rw0G017620 Rw0G018380 Rw1G002320 Rw1G020940 Rw1G021200 Rw1G022610 Rw1G038680 Rw2G013320 Rw2G016850 Rw2G024020 Rw2G025210 Rw2G032270 Rw2G039490 Rw2G041630 Rw2G048450 Rw2G051510 Rw3G025320 Rw4G003260 Rw4G007300 Rw4G009290 Rw4G010910 Rw4G013260 Rw5G008190 Rw5G008290 Rw5G018740 Rw5G023640 Rw5G028800 Rw5G031830 Rw5G041280 Rw5G044050 Rw6G007060 Rw6G008230 Rw6G009960 Rw6G013460 Rw6G014610 Rw6G017780 Rw6G033200 Rw7G021340 Rw7G023750 Rw7G032290 Rw7G032450 Rw7G033880 Rw7G038580 Rw7G040180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 717
AccB7I CCANNNNNTGG 1 cut(s) 644
AccI GTMKAC 1 cut(s) 1450
AccIII TCCGGA 1 cut(s) 127
AciI CCGC 1 cut(s) 711
AclWI GGATC 1 cut(s) 149
AcoI YGGCCR 2 cut(s) 909, 1158
AcsI RAATTY 9 cut(s) 28, 131, 272, 615, 664, 693, 760, 1436, 1801
AcuI CTGAAG 1 cut(s) 1019
AfaI GTAC 7 cut(s) 210, 338, 478, 918, 1353, 1887, 2018
AfiI CCNNNNNNNGG 3 cut(s) 158, 487, 644
AflII CTTAAG 1 cut(s) 589
AhlI ACTAGT 2 cut(s) 1331, 2177
AjnI CCWGG 1 cut(s) 157
AjuI GAANNNNNNNTTGG 2 cut(s) 1157, 1189
Alw26I GTCTC 2 cut(s) 1236, 2186
AlwI GGATC 1 cut(s) 149
Ama87I CYCGRG 3 cut(s) 882, 1355, 1795
Aor13HI TCCGGA 1 cut(s) 127
AoxI GGCC 4 cut(s) 467, 909, 1158, 1842
ApeKI GCWGC 1 cut(s) 356
ApoI RAATTY 9 cut(s) 28, 131, 272, 615, 664, 693, 760, 1436, 1801
ArsI GACNNNNNNTTYG 2 cut(s) 1475, 1507
Asp700I GAANNNNTTC 1 cut(s) 1381
AspLEI GCGC 1 cut(s) 1926
AspS9I GGNCC 3 cut(s) 233, 467, 1843
AsuHPI GGTGA 9 cut(s) 410, 425, 768, 860, 955, 1070, 1222, 1277, 2135
AvaI CYCGRG 3 cut(s) 882, 1355, 1795
AvaII GGWCC 1 cut(s) 233
AxyI CCTNAGG 1 cut(s) 1857
BalI TGGCCA 2 cut(s) 911, 1160
BauI CACGAG 1 cut(s) 254
BbsI GAAGAC 2 cut(s) 1718, 2105
BbvI GCAGC 1 cut(s) 343
BccI CCATC 5 cut(s) 82, 410, 929, 1367, 1972
BcgI CGANNNNNNTGC 4 cut(s) 27, 61, 1703, 1737
BciT130I CCWGG 1 cut(s) 159
BclI TGATCA 2 cut(s) 1701, 1894
BcoDI GTCTC 2 cut(s) 1236, 2186
BcuI ACTAGT 2 cut(s) 1331, 2177
BfaI CTAG 8 cut(s) 246, 837, 1286, 1332, 1397, 1880, 1889, 2178
BfrI CTTAAG 1 cut(s) 589
BisI GCNGC 1 cut(s) 357
BlsI GCNGC 1 cut(s) 358
Bme1390I CCNGG 1 cut(s) 159
Bme18I GGWCC 1 cut(s) 233
BmeT110I CYCGRG 3 cut(s) 882, 1355, 1795
BmgT120I GGNCC 3 cut(s) 233, 467, 1843
BmiI GGNNCC 1 cut(s) 72
BmrFI CCNGG 1 cut(s) 159
BmsI GCATC 4 cut(s) 343, 391, 605, 1723
BpiI GAAGAC 2 cut(s) 1718, 2105
BpuEI CTTGAG 2 cut(s) 1656, 1680
BsaAI YACGTR 1 cut(s) 2111
BsaWI WCCGGW 1 cut(s) 127
BsaXI ACNNNNNCTCC 2 cut(s) 1910, 1940
Bsc4I CCNNNNNNNGG 3 cut(s) 158, 487, 644
Bse1I ACTGG 3 cut(s) 434, 2016, 2048
Bse21I CCTNAGG 1 cut(s) 1857
Bse3DI GCAATG 3 cut(s) 1499, 1578, 1696
BseAI TCCGGA 1 cut(s) 127
BseBI CCWGG 1 cut(s) 159
BseGI GGATG 5 cut(s) 74, 937, 1378, 1660, 1744
BseLI CCNNNNNNNGG 3 cut(s) 158, 487, 644
BseMI GCAATG 3 cut(s) 1499, 1578, 1696
BseMII CTCAG 4 cut(s) 506, 1755, 1824, 1871
BseNI ACTGG 3 cut(s) 434, 2016, 2048
BseRI GAGGAG 1 cut(s) 56
BseXI GCAGC 1 cut(s) 343
BsgI GTGCAG 2 cut(s) 57, 1854
BshFI GGCC 4 cut(s) 469, 911, 1160, 1844
BsiHKCI CYCGRG 3 cut(s) 882, 1355, 1795
BsiSI CCGG 1 cut(s) 128
BslI CCNNNNNNNGG 3 cut(s) 158, 487, 644
BsmAI GTCTC 2 cut(s) 1236, 2186
BsmI GAATGC 3 cut(s) 1534, 1630, 1664
BsnI GGCC 4 cut(s) 469, 911, 1160, 1844
BsoBI CYCGRG 3 cut(s) 882, 1355, 1795
Bsp13I TCCGGA 1 cut(s) 127
Bsp143I GATC 9 cut(s) 154, 565, 1427, 1513, 1701, 1741, 1876, 1894, 1963
BspACI CCGC 1 cut(s) 711
BspANI GGCC 4 cut(s) 469, 911, 1160, 1844
BspCNI CTCAG 4 cut(s) 505, 1756, 1823, 1870
BspEI TCCGGA 1 cut(s) 127
BspHI TCATGA 1 cut(s) 1168
BspLI GGNNCC 1 cut(s) 72
BspPI GGATC 1 cut(s) 149
BspTI CTTAAG 1 cut(s) 589
BsrDI GCAATG 3 cut(s) 1499, 1578, 1696
BsrI ACTGG 3 cut(s) 434, 2016, 2048
BssMI GATC 9 cut(s) 154, 565, 1427, 1513, 1701, 1741, 1876, 1894, 1963
BssSI CACGAG 1 cut(s) 254
Bst2BI CACGAG 1 cut(s) 254
Bst2UI CCWGG 1 cut(s) 159
Bst4CI ACNGT 5 cut(s) 476, 503, 924, 1351, 1549
Bst6I CTCTTC 1 cut(s) 434
BstAFI CTTAAG 1 cut(s) 589
BstBAI YACGTR 1 cut(s) 2111
BstC8I GCNNGC 2 cut(s) 1569, 1842
BstDEI CTNAG 4 cut(s) 492, 1764, 1810, 1857
BstF5I GGATG 5 cut(s) 74, 937, 1378, 1660, 1744
BstHHI GCGC 1 cut(s) 1926
BstKTI GATC 9 cut(s) 157, 568, 1430, 1516, 1704, 1744, 1879, 1897, 1966
BstMAI GTCTC 2 cut(s) 1236, 2186
BstMBI GATC 9 cut(s) 154, 565, 1427, 1513, 1701, 1741, 1876, 1894, 1963
BstMWI GCNNNNNNNGC 2 cut(s) 1151, 1837
BstNI CCWGG 1 cut(s) 159
BstNSI RCATGY 2 cut(s) 974, 1924
BstSCI CCNGG 1 cut(s) 157
BstSNI TACGTA 1 cut(s) 2111
BstV1I GCAGC 1 cut(s) 343
BstV2I GAAGAC 2 cut(s) 1718, 2105
Bsu36I CCTNAGG 1 cut(s) 1857
BsuRI GGCC 4 cut(s) 469, 911, 1160, 1844
BtsCI GGATG 5 cut(s) 74, 937, 1378, 1660, 1744
BtsI GCAGTG 1 cut(s) 1161
BtsIMutI CAGTG 3 cut(s) 995, 1161, 2009
Cac8I GCNNGC 2 cut(s) 1569, 1842
CciI TCATGA 1 cut(s) 1168
CfoI GCGC 1 cut(s) 1926
Cfr13I GGNCC 3 cut(s) 233, 467, 1843
CseI GACGC 2 cut(s) 515, 1215
Csp6I GTAC 7 cut(s) 209, 337, 477, 917, 1352, 1886, 2017
CviQI GTAC 7 cut(s) 209, 337, 477, 917, 1352, 1886, 2017
DdeI CTNAG 4 cut(s) 492, 1764, 1810, 1857
DpnI GATC 9 cut(s) 156, 567, 1429, 1515, 1703, 1743, 1878, 1896, 1965
DpnII GATC 9 cut(s) 154, 565, 1427, 1513, 1701, 1741, 1876, 1894, 1963
DraI TTTAAA 2 cut(s) 16, 385
EaeI YGGCCR 2 cut(s) 909, 1158
Eam1104I CTCTTC 1 cut(s) 434
EarI CTCTTC 1 cut(s) 434
Eco105I TACGTA 1 cut(s) 2111
Eco47I GGWCC 1 cut(s) 233
Eco57I CTGAAG 1 cut(s) 1019
Eco81I CCTNAGG 1 cut(s) 1857
Eco88I CYCGRG 3 cut(s) 882, 1355, 1795
EcoO109I RGGNCCY 1 cut(s) 233
EcoRI GAATTC 2 cut(s) 615, 1436
EcoRII CCWGG 1 cut(s) 157
FauNDI CATATG 1 cut(s) 1432
FbaI TGATCA 2 cut(s) 1701, 1894
FblI GTMKAC 1 cut(s) 1450
Fnu4HI GCNGC 1 cut(s) 357
FokI GGATG 5 cut(s) 61, 944, 1385, 1667, 1751
Fsp4HI GCNGC 1 cut(s) 357
FspBI CTAG 8 cut(s) 246, 837, 1286, 1332, 1397, 1880, 1889, 2178
GlaI GCGC 1 cut(s) 1925
GluI GCNGC 1 cut(s) 357
HaeIII GGCC 4 cut(s) 469, 911, 1160, 1844
HapII CCGG 1 cut(s) 128
HgaI GACGC 2 cut(s) 515, 1215
HhaI GCGC 1 cut(s) 1926
Hin6I GCGC 1 cut(s) 1924
HinP1I GCGC 1 cut(s) 1924
HincII GTYRAC 2 cut(s) 242, 771
HindII GTYRAC 2 cut(s) 242, 771
HpaI GTTAAC 1 cut(s) 771
HpaII CCGG 1 cut(s) 128
HphI GGTGA 9 cut(s) 410, 425, 768, 860, 955, 1070, 1222, 1277, 2135
Hpy166II GTNNAC 7 cut(s) 242, 771, 842, 1451, 1918, 2017, 2108
Hpy8I GTNNAC 7 cut(s) 242, 771, 842, 1451, 1918, 2017, 2108
Hpy99I CGWCG 2 cut(s) 52, 2232
HpyAV CCTTC 2 cut(s) 994, 1945
HpyCH4III ACNGT 5 cut(s) 476, 503, 924, 1351, 1549
HpyCH4IV ACGT 1 cut(s) 2110
HpyF10VI GCNNNNNNNGC 2 cut(s) 1151, 1837
HpyF3I CTNAG 4 cut(s) 492, 1764, 1810, 1857
HpySE526I ACGT 1 cut(s) 2110
HspAI GCGC 1 cut(s) 1924
Kpn2I TCCGGA 1 cut(s) 127
Ksp22I TGATCA 2 cut(s) 1701, 1894
KspAI GTTAAC 1 cut(s) 771
Kzo9I GATC 9 cut(s) 154, 565, 1427, 1513, 1701, 1741, 1876, 1894, 1963
LmnI GCTCC 5 cut(s) 70, 901, 1040, 1223, 1931
Lsp1109I GCAGC 1 cut(s) 343
LweI GCATC 4 cut(s) 343, 391, 605, 1723
MaeI CTAG 8 cut(s) 246, 837, 1286, 1332, 1397, 1880, 1889, 2178
MaeII ACGT 1 cut(s) 2110
MaeIII GTNAC 7 cut(s) 503, 736, 973, 1543, 1999, 2026, 2123
MalI GATC 9 cut(s) 156, 567, 1429, 1515, 1703, 1743, 1878, 1896, 1965
MboI GATC 9 cut(s) 154, 565, 1427, 1513, 1701, 1741, 1876, 1894, 1963
MfeI CAATTG 2 cut(s) 831, 2237
MlsI TGGCCA 2 cut(s) 911, 1160
MluNI TGGCCA 2 cut(s) 911, 1160
MlyI GAGTC 2 cut(s) 53, 2095
MmeI TCCRAC 4 cut(s) 442, 1201, 1716, 1953
Mox20I TGGCCA 2 cut(s) 911, 1160
MroI TCCGGA 1 cut(s) 127
MroXI GAANNNNTTC 1 cut(s) 1381
MscI TGGCCA 2 cut(s) 911, 1160
MslI CAYNNNNRTG 3 cut(s) 192, 648, 1266
Msp20I TGGCCA 2 cut(s) 911, 1160
MspCI CTTAAG 1 cut(s) 589
MspI CCGG 1 cut(s) 128
MspR9I CCNGG 1 cut(s) 159
MunI CAATTG 2 cut(s) 831, 2237
Mva1269I GAATGC 3 cut(s) 1534, 1630, 1664
MvaI CCWGG 1 cut(s) 159
MwoI GCNNNNNNNGC 2 cut(s) 1151, 1837
NdeI CATATG 1 cut(s) 1432
NdeII GATC 9 cut(s) 154, 565, 1427, 1513, 1701, 1741, 1876, 1894, 1963
NlaIV GGNNCC 1 cut(s) 72
NmuCI GTSAC 5 cut(s) 503, 736, 1999, 2026, 2123
NspI RCATGY 2 cut(s) 974, 1924
PaeR7I CTCGAG 2 cut(s) 882, 1355
PagI TCATGA 1 cut(s) 1168
PctI GAATGC 3 cut(s) 1534, 1630, 1664
PdmI GAANNNNTTC 1 cut(s) 1381
PfeI GAWTC 8 cut(s) 583, 656, 851, 878, 1165, 1321, 1476, 1592
PflMI CCANNNNNTGG 1 cut(s) 644
PfoI TCCNGGA 1 cut(s) 157
PkrI GCNGC 1 cut(s) 358
PleI GAGTC 2 cut(s) 52, 2095
PpsI GAGTC 2 cut(s) 52, 2095
Ppu21I YACGTR 1 cut(s) 2111
PpuMI RGGWCCY 1 cut(s) 233
PsiI TTATAA 1 cut(s) 717
Psp5II RGGWCCY 1 cut(s) 233
Psp6I CCWGG 1 cut(s) 157
PspGI CCWGG 1 cut(s) 157
PspN4I GGNNCC 1 cut(s) 72
PspPI GGNCC 3 cut(s) 233, 467, 1843
PspPPI RGGWCCY 1 cut(s) 233
PspXI VCTCGAGB 1 cut(s) 1355
RsaI GTAC 7 cut(s) 210, 338, 478, 918, 1353, 1887, 2018
RsaNI GTAC 7 cut(s) 209, 337, 477, 917, 1352, 1886, 2017
RseI CAYNNNNRTG 3 cut(s) 192, 648, 1266
SatI GCNGC 1 cut(s) 357
Sau3AI GATC 9 cut(s) 154, 565, 1427, 1513, 1701, 1741, 1876, 1894, 1963
Sau96I GGNCC 3 cut(s) 233, 467, 1843
SchI GAGTC 2 cut(s) 53, 2095
ScrFI CCNGG 1 cut(s) 159
SfaNI GCATC 4 cut(s) 343, 391, 605, 1723
Sfr274I CTCGAG 2 cut(s) 882, 1355
SinI GGWCC 1 cut(s) 233
SlaI CTCGAG 2 cut(s) 882, 1355
SmiMI CAYNNNNRTG 3 cut(s) 192, 648, 1266
SmlI CTYRAG 5 cut(s) 589, 882, 1355, 1671, 1695
SmoI CTYRAG 5 cut(s) 589, 882, 1355, 1671, 1695
SnaBI TACGTA 1 cut(s) 2111
SpeI ACTAGT 2 cut(s) 1331, 2177
SsiI CCGC 1 cut(s) 711
SspI AATATT 2 cut(s) 1850, 2092
SspMI CTAG 8 cut(s) 246, 837, 1286, 1332, 1397, 1880, 1889, 2178
StyD4I CCNGG 1 cut(s) 157
TaaI ACNGT 5 cut(s) 476, 503, 924, 1351, 1549
TaiI ACGT 1 cut(s) 2113
TaqI TCGA 5 cut(s) 676, 883, 1356, 2116, 2230
TatI WGTACW 4 cut(s) 336, 916, 1351, 2016
TfiI GAWTC 8 cut(s) 583, 656, 851, 878, 1165, 1321, 1476, 1592
TscAI CASTG 3 cut(s) 1002, 1161, 2016
TseFI GTSAC 5 cut(s) 503, 736, 1999, 2026, 2123
TseI GCWGC 1 cut(s) 356
Tsp45I GTSAC 5 cut(s) 503, 736, 1999, 2026, 2123
TspGWI ACGGA 1 cut(s) 1053
TspRI CASTG 3 cut(s) 1002, 1161, 2016
Van91I CCANNNNNTGG 1 cut(s) 644
Vha464I CTTAAG 1 cut(s) 589
VpaK11BI GGWCC 1 cut(s) 233
XapI RAATTY 9 cut(s) 28, 131, 272, 615, 664, 693, 760, 1436, 1801
XbaI TCTAGA 1 cut(s) 1879
XceI RCATGY 2 cut(s) 974, 1924
XhoI CTCGAG 2 cut(s) 882, 1355
XmiI GTMKAC 1 cut(s) 1450
XmnI GAANNNNTTC 1 cut(s) 1381
XspI CTAG 8 cut(s) 246, 837, 1286, 1332, 1397, 1880, 1889, 2178
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.