Rw4G013260

Zinc finger MYM-type protein 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000122
Physical Location & Seq
Reverse (-)
31024729 .. 31027036
2308 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G013260.1

Sequence Viewer

Length: 1920 bp
ATGGAAAGATTCTTTAAAAGAAAATCAGACATGCTACCACCCCTTGAAGATAGCCGTATTCAGGTAGAAATAAACTTGGCAAATCTTCCTTCAGATCCTGGATTACAAATCGGGATTTCAGATTATGATCCGAATATTCGAGACCAAGTTCGAAGAGAATATCTGCAAAGGGGTCCTTACAAAGATCGAGCATATTGTCTGTGCTGCTACCTATTTAAAGCAAATATTGGAGATCAAGCAGGTGGTGATGTCTTTACTAGTGATGGTTTTCGAAATTGGAAAAAGAAAGAAAGATTATATGATCATGTCGGAGACCACAGCAGTGCTCATAATCAAGCTTTGAAGAAGTGTGAAGCCTTGATGAATGAAAATCAACACATTCGAAATATTATCCACAAGAATGCTAAGCAATCCAGAACAAATTATCGAATTCGGCTCACTGCATCAGTTGATTGCATTCGGTTTCTTCTAAGACAAGGCCTTGCATTTCGAGGCCATGATGAGTCGGACAATTCAAGCAATCAGGGTAACTTTCTTCAACTCTTACAATTTCTTGCTGATCATGATCAAGAAGTTAGAGCAACAGTAAATGCTGCTGCAGTTGAAACAACAAATACTATAATTAGAGACATGGATAATGCATTATTCTCTATTATAATGGCTATTATCTTTCGTTATGTGGATAAGAATGGTTGTGTGATTGAACGTTTCATTGGCATTGAACATGTTGCTAATACCACTGCCATAACACTTAAAGAAGCTATAGATGCATTGCTTTGTAAACATGGTTTAAGCATATCAAGTTTACGTGGCCAAGGTTTTGACGGAGCAAGTAATATGAGTGGGGAACTTAATGGCTTAAAAACACTTATTTTGAGGGAGAATTCCAATGCTTTTTATGTCCATTGTTTTGCGCATCAGCTCCAGTTAGCTTTGGTGGCTGTAGCAAAGAAACAAAGCATTGTAGGTGCTTTTTTCACATCAGTTGCTCACGTTGTAAACATTGTTGGTGCATCTTCTAAACGTCGTGATATTCTTCGAGAAAAGCAGGCTCTCAAAGTTATTCAAGCATTGAAAGATGGAGAACTTACAAGTGGAAGATGCTTAAATCAAGAAATTAAGATTAAGCGTCCATCTGATACACGTTGGGGCTCCCATTATGGTACGCTCATAAACTTTACTGCCATTCTGCACTGGATGAGGATTGTACTTGGAATTAGTCATGAGTTGTCACAAGCCTTGCAAAAAGATTATCAAGATATAGTAAATGCAATGGATCTAGTGAAAATTTGCAAAACAAGATTGCAAGATATGAGGGATAATGGATGGGATTCTTTATTACAGCAAGTTGTTGCCTTCTGTGGCAAAGAAAATATTATGGTTCCCAACATGAATCTCCAACTTCAAGAGCTAAACAATCGTTTCAATGAGGTCAATACTGAGTTACTCCTTTGTTTGGCATGTTTAAGTCCTCTTCACTCATTTTCTGCTTTCAACAAGCAACGTTTGATGCTTCTTGCTCAATTTTATCCGAATGATTTTTCTACATCAGCTTTGTTGGTACTAGAGTCTCAGCTTGATATATATATGGATGATATGCAATCTAACACAAAGTTTCAAGACTTGCAAGGAATTTCTTATCTAGCACAGAAACTTGTTGAGACAGGAAAGCACAAGACATATCCATTTGTCTATCTACTCATAACCTTGGCACTAGTACTTCCTGTTACAACAGCCACAGTTGAAAGAGCATTCTCTGCCATGAATATCATAAAAAATCGACTGCGAAATCGAATGGGTGATCAGTGGTTGAATGATAGCTTAACAGTATACCTTGAGAAAGATATATTCAATGTCATTGACAATGAGCTTATAATTCAACGATTCCAAAACATGGCTCCTCGTCGAGGACAACTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

639

Amino Acids

72.76

Weight (kDa)

8.64

Isoelectric Point (pI)

41.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 83 - 200 1.4e-29 Domain of unknown function (DUF4371)
DUF4371 PF14291 200 - 286 1.5e-23 Domain of unknown function (DUF4371)
Dimer_Tnp_hAT PF05699 556 - 615 8.4e-07 hAT family C-terminal dimerisation region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19260 AT1G41920 AT1G42710 AT2G06541 AT2G06541 AT3G29450 AT3G29763 AT3G29765 AT3G31402 AT3G31402 AT4G09660
fragaria_vesca FvH4_1g22711 FvH4_3g10612 FvH4_3g23261 FvH4_3g31623 FvH4_3g33391 FvH4_3g37321 FvH4_3g43192 FvH4_3g43193 FvH4_4g00181 FvH4_4g00251 FvH4_4g08751 FvH4_4g15271 FvH4_5g27190 FvH4_6g02122 FvH4_6g26880 FvH4_6g35121 FvH4_7g16871 FvH4_7g19080 FvH4_7g30071
malus_domestica MD02G1162100.v1.1 MD03G1081700.v1.1 MD09G1280500.v1.1 MD12G1083800.v1.1 MD12G1128200.v1.1
prunus_persica Prupe.7G129800_v2.0.a1
pyrus_communis pycom01g08000 pycom02g13840 pycom02g18030 pycom04g01290 pycom04g12580 pycom05g02550 pycom05g06740 pycom05g26200 pycom07g09850 pycom08g10610 pycom10g11280 pycom11g12580 pycom11g22260 pycom12g18440 pycom13g20080 pycom15g25600 pycom16g23600 pycom17g10070
rosa_chinensis RchiOBHm_Chr1g0313551 RchiOBHm_Chr1g0364331 RchiOBHm_Chr1g0369741 RchiOBHm_Chr1g0380371 RchiOBHm_Chr2g0097391 RchiOBHm_Chr2g0113561 RchiOBHm_Chr2g0114151 RchiOBHm_Chr2g0119761 RchiOBHm_Chr2g0149851 RchiOBHm_Chr2g0151931 RchiOBHm_Chr2g0166411 RchiOBHm_Chr3g0453661 RchiOBHm_Chr3g0466101 RchiOBHm_Chr3g0477911 RchiOBHm_Chr3g0486441 RchiOBHm_Chr4g0390161 RchiOBHm_Chr4g0392191 RchiOBHm_Chr4g0414461 RchiOBHm_Chr4g0421421 RchiOBHm_Chr5g0023801 RchiOBHm_Chr5g0040121 RchiOBHm_Chr5g0045381 RchiOBHm_Chr5g0061511 RchiOBHm_Chr5g0062621 RchiOBHm_Chr5g0064161 RchiOBHm_Chr5g0068711 RchiOBHm_Chr6g0246041 RchiOBHm_Chr6g0252511 RchiOBHm_Chr6g0252521 RchiOBHm_Chr6g0263361 RchiOBHm_Chr6g0269451 RchiOBHm_Chr6g0275351 RchiOBHm_Chr6g0288481 RchiOBHm_Chr6g0310011 RchiOBHm_Chr6g0310021 RchiOBHm_Chr7g0223071 RchiOBHm_Chr7g0227621 RchiOBHm_Chr7g0242581
rosa_laevigata RLG00000033957
rosa_multiflora Rmu_co8455865.1_g000001 Rmu_sc0000021.1_g000011 Rmu_sc0000079.1_g000049 Rmu_sc0000087.1_g000015 Rmu_sc0000151.1_g000008 Rmu_sc0000365.1_g000014 Rmu_sc0000446.1_g000054 Rmu_sc0000446.1_g000055 Rmu_sc0000534.1_g000006 Rmu_sc0000724.1_g000020 Rmu_sc0000859.1_g000001 Rmu_sc0000876.1_g000002 Rmu_sc0000881.1_g000005 Rmu_sc0000929.1_g000014 Rmu_sc0001112.1_g000004 Rmu_sc0001136.1_g000009 Rmu_sc0001353.1_g000064 Rmu_sc0001662.1_g000005 Rmu_sc0001764.1_g000006 Rmu_sc0001982.1_g000015 Rmu_sc0002052.1_g000008 Rmu_sc0002052.1_g000009 Rmu_sc0002158.1_g000011 Rmu_sc0002285.1_g000005 Rmu_sc0002983.1_g000025 Rmu_sc0003063.1_g000006 Rmu_sc0003076.1_g000005 Rmu_sc0003221.1_g000053 Rmu_sc0003382.1_g000010 Rmu_sc0003733.1_g000054 Rmu_sc0003997.1_g000005 Rmu_sc0004283.1_g000008 Rmu_sc0004283.1_g000053 Rmu_sc0004509.1_g000007 Rmu_sc0004540.1_g000028 Rmu_sc0004657.1_g000005 Rmu_sc0004935.1_g000006 Rmu_sc0005072.1_g000003 Rmu_sc0005248.1_g000001 Rmu_sc0006161.1_g000001 Rmu_sc0006209.1_g000005 Rmu_sc0006576.1_g000018 Rmu_sc0006576.1_g000019 Rmu_sc0007121.1_g000016 Rmu_sc0007121.1_g000032 Rmu_sc0007753.1_g000016 Rmu_sc0007795.1_g000009 Rmu_sc0007841.1_g000019 Rmu_sc0008339.1_g000021 Rmu_sc0008339.1_g000022 Rmu_sc0008432.1_g000001 Rmu_sc0008633.1_g000009 Rmu_sc0009104.1_g000013 Rmu_sc0011469.1_g000001 Rmu_sc0012039.1_g000001 Rmu_sc0013947.1_g000007 Rmu_sc0015560.1_g000001 Rmu_sc0017369.1_g000001 Rmu_sc0021648.1_g000001 Rmu_sc0022867.1_g000003 Rmu_sc0027801.1_g000001 Rmu_sc0027801.1_g000002 Rmu_sc0029861.1_g000001 Rmu_sc0030314.1_g000001 Rmu_sc0040149.1_g000001 Rmu_ssc0000089.1_g000028 Rmu_ssc0000480.1_g000033
rosa_roxburghii Rroxscaffold_1G00002540 Rroxscaffold_1G00013960 Rroxscaffold_1G00041160 Rroxscaffold_1G00045580 Rroxscaffold_3G00247310 Rroxscaffold_3G00267070 Rroxscaffold_4G00313830 Rroxscaffold_5G00372270 Rroxscaffold_6G00404800 Rroxscaffold_6G00406090
rosa_rugosa Rorug03G0269800 Rorug04G0142900 Rorug04G0152600 Rorug05G0223300.1 Rorug05G0266400 Rorug06G0008900 Rorug07G0086000 Rorug07G0205800 Rorug07G0270900
rosa_wichuraiana Rw0G001600 Rw0G017220 Rw0G017620 Rw0G018380 Rw1G002320 Rw1G020940 Rw1G021200 Rw1G022610 Rw1G038680 Rw2G013320 Rw2G016850 Rw2G024020 Rw2G025210 Rw2G032270 Rw2G039490 Rw2G041630 Rw2G048450 Rw2G051510 Rw3G025320 Rw4G003260 Rw4G007300 Rw4G009290 Rw4G010910 Rw4G013260 Rw5G008190 Rw5G008290 Rw5G018740 Rw5G023640 Rw5G028800 Rw5G031830 Rw5G041280 Rw5G044050 Rw6G007060 Rw6G008230 Rw6G009960 Rw6G013460 Rw6G014610 Rw6G017780 Rw6G033200 Rw7G021340 Rw7G023750 Rw7G032290 Rw7G032450 Rw7G033880 Rw7G038580 Rw7G040180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 656, 1874
AarI CACCTGC 1 cut(s) 230
Acc16I TGCGCA 1 cut(s) 915
Acc36I ACCTGC 1 cut(s) 230
AccB7I CCANNNNNTGG 1 cut(s) 1894
AccI GTMKAC 1 cut(s) 1830
AclI AACGTT 2 cut(s) 706, 1504
AclWI GGATC 3 cut(s) 89, 122, 1284
AcoI YGGCCR 1 cut(s) 811
AcsI RAATTY 4 cut(s) 429, 883, 1287, 1632
AcuI CTGAAG 1 cut(s) 75
AfaI GTAC 4 cut(s) 1165, 1209, 1563, 1719
AfiI CCNNNNNNNGG 4 cut(s) 61, 1456, 1894, 1907
AflIII ACRYGT 2 cut(s) 724, 1142
AhlI ACTAGT 2 cut(s) 257, 1714
AjnI CCWGG 1 cut(s) 97
AjuI GAANNNNNNNTTGG 2 cut(s) 696, 728
AleI CACNNNNGTG 1 cut(s) 321
AluBI AGCT 9 cut(s) 338, 761, 922, 932, 1411, 1553, 1576, 1821, 1870
AluI AGCT 9 cut(s) 338, 761, 922, 932, 1411, 1553, 1576, 1821, 1870
Alw21I GWGCWC 1 cut(s) 328
Alw26I GTCTC 5 cut(s) 135, 306, 621, 1575, 1655
AlwI GGATC 3 cut(s) 89, 122, 1284
AlwNI CAGNNNCTG 1 cut(s) 98
AoxI GGCC 3 cut(s) 478, 493, 811
ApeKI GCWGC 3 cut(s) 204, 593, 596
ApoI RAATTY 4 cut(s) 429, 883, 1287, 1632
AspLEI GCGC 1 cut(s) 916
AspS9I GGNCC 1 cut(s) 173
AsuHPI GGTGA 2 cut(s) 257, 1811
AsuII TTCGAA 3 cut(s) 151, 271, 382
AvaII GGWCC 1 cut(s) 173
BaeI ACNNNNGTAYC 2 cut(s) 1553, 1586
BalI TGGCCA 1 cut(s) 813
BanII GRGCYC 1 cut(s) 1154
Bbv12I GWGCWC 1 cut(s) 328
BbvI GCAGC 3 cut(s) 191, 580, 583
BccI CCATC 4 cut(s) 257, 1073, 1141, 1320
BceAI ACGGC 1 cut(s) 39
BciT130I CCWGG 1 cut(s) 99
BclI TGATCA 4 cut(s) 301, 559, 565, 1801
BcoDI GTCTC 5 cut(s) 135, 306, 621, 1575, 1655
BcuI ACTAGT 2 cut(s) 257, 1714
BfaI CTAG 5 cut(s) 258, 1280, 1565, 1643, 1715
BfmI CTRYAG 4 cut(s) 597, 762, 942, 1916
BfuAI ACCTGC 1 cut(s) 230
BisI GCNGC 3 cut(s) 205, 594, 597
BlpI GCTNAGC 1 cut(s) 405
BlsI GCNGC 3 cut(s) 206, 595, 598
BmcAI AGTACT 1 cut(s) 1719
Bme1390I CCNGG 1 cut(s) 99
Bme18I GGWCC 1 cut(s) 173
BmgT120I GGNCC 1 cut(s) 173
BmiI GGNNCC 4 cut(s) 174, 1153, 1383, 1899
BmrFI CCNGG 1 cut(s) 99
BmsI GCATC 6 cut(s) 452, 757, 925, 1022, 1091, 1500
BpmI CTGGAG 1 cut(s) 908
Bpu1102I GCTNAGC 1 cut(s) 405
Bpu14I TTCGAA 3 cut(s) 151, 271, 382
BpuEI CTTGAG 1 cut(s) 1856
BsaAI YACGTR 1 cut(s) 809
BsaBI GATNNNNATC 2 cut(s) 126, 564
BsaI GGTCTC 2 cut(s) 135, 306
BsaJI CCNNGG 2 cut(s) 814, 1707
Bsc4I CCNNNNNNNGG 4 cut(s) 61, 1456, 1894, 1907
Bse1I ACTGG 2 cut(s) 925, 1199
Bse3DI GCAATG 2 cut(s) 770, 1278
Bse8I GATNNNNATC 2 cut(s) 126, 564
BseBI CCWGG 1 cut(s) 99
BseDI CCNNGG 2 cut(s) 814, 1707
BseGI GGATG 3 cut(s) 1203, 1331, 1597
BseJI GATNNNNATC 2 cut(s) 126, 564
BseLI CCNNNNNNNGG 4 cut(s) 61, 1456, 1894, 1907
BseMI GCAATG 2 cut(s) 770, 1278
BseMII CTCAG 2 cut(s) 1431, 1586
BseNI ACTGG 2 cut(s) 925, 1199
BseRI GAGGAG 1 cut(s) 1890
BseXI GCAGC 3 cut(s) 191, 580, 583
BsgI GTGCAG 1 cut(s) 1175
BshFI GGCC 3 cut(s) 480, 495, 813
BsiHKAI GWGCWC 1 cut(s) 328
BslI CCNNNNNNNGG 4 cut(s) 61, 1456, 1894, 1907
BsmAI GTCTC 5 cut(s) 135, 306, 621, 1575, 1655
BsmI GAATGC 3 cut(s) 406, 456, 1751
BsnI GGCC 3 cut(s) 480, 495, 813
Bso31I GGTCTC 2 cut(s) 135, 306
Bsp119I TTCGAA 3 cut(s) 151, 271, 382
Bsp1286I GDGCHC 2 cut(s) 328, 1154
Bsp143I GATC 9 cut(s) 94, 127, 184, 232, 301, 559, 565, 1276, 1801
Bsp1720I GCTNAGC 1 cut(s) 405
BspANI GGCC 3 cut(s) 480, 495, 813
BspCNI CTCAG 2 cut(s) 1432, 1585
BspHI TCATGA 2 cut(s) 562, 1222
BspLI GGNNCC 4 cut(s) 174, 1153, 1383, 1899
BspMAI CTGCAG 1 cut(s) 601
BspMI ACCTGC 1 cut(s) 230
BspPI GGATC 3 cut(s) 89, 122, 1284
BspT104I TTCGAA 3 cut(s) 151, 271, 382
BspTNI GGTCTC 2 cut(s) 135, 306
BsrDI GCAATG 2 cut(s) 770, 1278
BsrI ACTGG 2 cut(s) 925, 1199
BssECI CCNNGG 2 cut(s) 814, 1707
BssMI GATC 9 cut(s) 94, 127, 184, 232, 301, 559, 565, 1276, 1801
BssNAI GTATAC 1 cut(s) 1831
BssT1I CCWWGG 2 cut(s) 814, 1707
Bst1107I GTATAC 1 cut(s) 1831
Bst2UI CCWGG 1 cut(s) 99
Bst4CI ACNGT 3 cut(s) 586, 1741, 1828
Bst6I CTCTTC 2 cut(s) 148, 1479
BstAPI GCANNNNNTGC 1 cut(s) 1757
BstBAI YACGTR 1 cut(s) 809
BstBI TTCGAA 3 cut(s) 151, 271, 382
BstC8I GCNNGC 1 cut(s) 1050
BstDEI CTNAG 4 cut(s) 405, 470, 1440, 1572
BstENI CCTNNNNNAGG 1 cut(s) 1905
BstF5I GGATG 3 cut(s) 1203, 1331, 1597
BstHHI GCGC 1 cut(s) 916
BstKTI GATC 9 cut(s) 97, 130, 187, 235, 304, 562, 568, 1279, 1804
BstMAI GTCTC 5 cut(s) 135, 306, 621, 1575, 1655
BstMBI GATC 9 cut(s) 94, 127, 184, 232, 301, 559, 565, 1276, 1801
BstMWI GCNNNNNNNGC 3 cut(s) 767, 938, 1757
BstNI CCWGG 1 cut(s) 99
BstNSI RCATGY 3 cut(s) 34, 728, 1464
BstSCI CCNGG 1 cut(s) 97
BstSFI CTRYAG 4 cut(s) 597, 762, 942, 1916
BstV1I GCAGC 3 cut(s) 191, 580, 583
BstX2I RGATCY 2 cut(s) 94, 1276
BstYI RGATCY 2 cut(s) 94, 1276
BstZ17I GTATAC 1 cut(s) 1831
BsuRI GGCC 3 cut(s) 480, 495, 813
BtsCI GGATG 3 cut(s) 1203, 1331, 1597
BtsI GCAGTG 3 cut(s) 328, 438, 738
BtsIMutI CAGTG 5 cut(s) 328, 438, 738, 1192, 1811
BveI ACCTGC 1 cut(s) 230
Cac8I GCNNGC 1 cut(s) 1050
CaiI CAGNNNCTG 1 cut(s) 98
CciI TCATGA 2 cut(s) 562, 1222
CfoI GCGC 1 cut(s) 916
Cfr13I GGNCC 1 cut(s) 173
CseI GACGC 1 cut(s) 1118
Csp6I GTAC 4 cut(s) 1164, 1208, 1562, 1718
CviQI GTAC 4 cut(s) 1164, 1208, 1562, 1718
DdeI CTNAG 4 cut(s) 405, 470, 1440, 1572
DpnI GATC 9 cut(s) 96, 129, 186, 234, 303, 561, 567, 1278, 1803
DpnII GATC 9 cut(s) 94, 127, 184, 232, 301, 559, 565, 1276, 1801
DraI TTTAAA 2 cut(s) 16, 217
EaeI YGGCCR 1 cut(s) 811
Eam1104I CTCTTC 2 cut(s) 148, 1479
EarI CTCTTC 2 cut(s) 148, 1479
Eco130I CCWWGG 2 cut(s) 814, 1707
Eco147I AGGCCT 1 cut(s) 480
Eco24I GRGCYC 1 cut(s) 1154
Eco31I GGTCTC 2 cut(s) 135, 306
Eco47I GGWCC 1 cut(s) 173
Eco57I CTGAAG 1 cut(s) 75
EcoNI CCTNNNNNAGG 1 cut(s) 1905
EcoO109I RGGNCCY 1 cut(s) 173
EcoRI GAATTC 2 cut(s) 429, 883
EcoRII CCWGG 1 cut(s) 97
EcoT14I CCWWGG 2 cut(s) 814, 1707
EcoT22I ATGCAT 2 cut(s) 643, 772
EcoT38I GRGCYC 1 cut(s) 1154
ErhI CCWWGG 2 cut(s) 814, 1707
FalI AAGNNNNNCTT 2 cut(s) 160, 192
FbaI TGATCA 4 cut(s) 301, 559, 565, 1801
FblI GTMKAC 1 cut(s) 1830
Fnu4HI GCNGC 3 cut(s) 205, 594, 597
FokI GGATG 3 cut(s) 1210, 1338, 1604
FriOI GRGCYC 1 cut(s) 1154
Fsp4HI GCNGC 3 cut(s) 205, 594, 597
FspBI CTAG 5 cut(s) 258, 1280, 1565, 1643, 1715
FspI TGCGCA 1 cut(s) 915
GlaI GCGC 1 cut(s) 915
GluI GCNGC 3 cut(s) 205, 594, 597
GsuI CTGGAG 1 cut(s) 908
HaeIII GGCC 3 cut(s) 480, 495, 813
HgaI GACGC 1 cut(s) 1118
HhaI GCGC 1 cut(s) 916
Hin6I GCGC 1 cut(s) 914
HinP1I GCGC 1 cut(s) 914
HindIII AAGCTT 1 cut(s) 336
HinfI GANTC 6 cut(s) 9, 503, 1331, 1393, 1568, 1884
HphI GGTGA 2 cut(s) 257, 1811
Hpy166II GTNNAC 4 cut(s) 782, 806, 1000, 1831
Hpy188I TCNGA 8 cut(s) 28, 94, 121, 132, 311, 508, 1138, 1533
Hpy8I GTNNAC 4 cut(s) 782, 806, 1000, 1831
Hpy99I CGWCG 2 cut(s) 1029, 1908
HpyAV CCTTC 2 cut(s) 99, 1366
HpyCH4III ACNGT 3 cut(s) 586, 1741, 1828
HpyCH4IV ACGT 6 cut(s) 706, 808, 993, 1024, 1144, 1504
HpyF10VI GCNNNNNNNGC 3 cut(s) 767, 938, 1757
HpyF3I CTNAG 4 cut(s) 405, 470, 1440, 1572
HpySE526I ACGT 6 cut(s) 706, 808, 993, 1024, 1144, 1504
HspAI GCGC 1 cut(s) 914
Ksp22I TGATCA 4 cut(s) 301, 559, 565, 1801
Kzo9I GATC 9 cut(s) 94, 127, 184, 232, 301, 559, 565, 1276, 1801
LmnI GCTCC 4 cut(s) 827, 927, 1157, 1903
Lsp1109I GCAGC 3 cut(s) 191, 580, 583
LweI GCATC 6 cut(s) 452, 757, 925, 1022, 1091, 1500
MaeI CTAG 5 cut(s) 258, 1280, 1565, 1643, 1715
MaeII ACGT 6 cut(s) 706, 808, 993, 1024, 1144, 1504
MaeIII GTNAC 4 cut(s) 527, 1230, 1443, 1726
MalI GATC 9 cut(s) 96, 129, 186, 234, 303, 561, 567, 1278, 1803
MboI GATC 9 cut(s) 94, 127, 184, 232, 301, 559, 565, 1276, 1801
MflI RGATCY 2 cut(s) 94, 1276
MhlI GDGCHC 2 cut(s) 328, 1154
MlsI TGGCCA 1 cut(s) 813
MluNI TGGCCA 1 cut(s) 813
MlyI GAGTC 2 cut(s) 512, 1577
MmeI TCCRAC 3 cut(s) 289, 486, 1423
MnlI CCTC 8 cut(s) 485, 870, 1194, 1308, 1423, 1482, 1901, 1911
Mox20I TGGCCA 1 cut(s) 813
Mph1103I ATGCAT 2 cut(s) 643, 772
MscI TGGCCA 1 cut(s) 813
MslI CAYNNNNRTG 2 cut(s) 321, 399
Msp20I TGGCCA 1 cut(s) 813
MspR9I CCNGG 1 cut(s) 99
Mva1269I GAATGC 3 cut(s) 406, 456, 1751
MvaI CCWGG 1 cut(s) 99
MwoI GCNNNNNNNGC 3 cut(s) 767, 938, 1757
NdeII GATC 9 cut(s) 94, 127, 184, 232, 301, 559, 565, 1276, 1801
NlaIV GGNNCC 4 cut(s) 174, 1153, 1383, 1899
NmuCI GTSAC 1 cut(s) 1230
NsbI TGCGCA 1 cut(s) 915
NsiI ATGCAT 2 cut(s) 643, 772
NspI RCATGY 3 cut(s) 34, 728, 1464
NspV TTCGAA 3 cut(s) 151, 271, 382
OliI CACNNNNGTG 1 cut(s) 321
PagI TCATGA 2 cut(s) 562, 1222
PaqCI CACCTGC 1 cut(s) 230
PceI AGGCCT 1 cut(s) 480
PciI ACATGT 1 cut(s) 724
PctI GAATGC 3 cut(s) 406, 456, 1751
PfeI GAWTC 4 cut(s) 9, 1331, 1393, 1884
PflMI CCANNNNNTGG 1 cut(s) 1894
PfoI TCCNGGA 1 cut(s) 97
PkrI GCNGC 3 cut(s) 206, 595, 598
PleI GAGTC 2 cut(s) 511, 1576
PpsI GAGTC 2 cut(s) 511, 1576
Ppu21I YACGTR 1 cut(s) 809
PpuMI RGGWCCY 1 cut(s) 173
PscI ACATGT 1 cut(s) 724
PsiI TTATAA 2 cut(s) 656, 1874
Psp1406I AACGTT 2 cut(s) 706, 1504
Psp5II RGGWCCY 1 cut(s) 173
Psp6I CCWGG 1 cut(s) 97
PspGI CCWGG 1 cut(s) 97
PspN4I GGNNCC 4 cut(s) 174, 1153, 1383, 1899
PspPI GGNCC 1 cut(s) 173
PspPPI RGGWCCY 1 cut(s) 173
PstI CTGCAG 1 cut(s) 601
PstNI CAGNNNCTG 1 cut(s) 98
PsuI RGATCY 2 cut(s) 94, 1276
RsaI GTAC 4 cut(s) 1165, 1209, 1563, 1719
RsaNI GTAC 4 cut(s) 1164, 1208, 1562, 1718
RseI CAYNNNNRTG 2 cut(s) 321, 399
SatI GCNGC 3 cut(s) 205, 594, 597
Sau3AI GATC 9 cut(s) 94, 127, 184, 232, 301, 559, 565, 1276, 1801
Sau96I GGNCC 1 cut(s) 173
ScaI AGTACT 1 cut(s) 1719
SchI GAGTC 2 cut(s) 512, 1577
ScrFI CCNGG 1 cut(s) 99
SduI GDGCHC 2 cut(s) 328, 1154
SfaNI GCATC 6 cut(s) 452, 757, 925, 1022, 1091, 1500
SfcI CTRYAG 4 cut(s) 597, 762, 942, 1916
SfuI TTCGAA 3 cut(s) 151, 271, 382
SinI GGWCC 1 cut(s) 173
SmiMI CAYNNNNRTG 2 cut(s) 321, 399
SmlI CTYRAG 1 cut(s) 1835
SmoI CTYRAG 1 cut(s) 1835
SpeI ACTAGT 2 cut(s) 257, 1714
SseBI AGGCCT 1 cut(s) 480
SspI AATATT 4 cut(s) 136, 226, 388, 1375
SspMI CTAG 5 cut(s) 258, 1280, 1565, 1643, 1715
StuI AGGCCT 1 cut(s) 480
StyD4I CCNGG 1 cut(s) 97
StyI CCWWGG 2 cut(s) 814, 1707
TaaI ACNGT 3 cut(s) 586, 1741, 1828
TaiI ACGT 6 cut(s) 709, 811, 996, 1027, 1147, 1507
TatI WGTACW 2 cut(s) 1207, 1717
TfiI GAWTC 4 cut(s) 9, 1331, 1393, 1884
TscAI CASTG 5 cut(s) 328, 445, 745, 1199, 1811
TseFI GTSAC 1 cut(s) 1230
TseI GCWGC 3 cut(s) 204, 593, 596
Tsp45I GTSAC 1 cut(s) 1230
TspDTI ATGAA 5 cut(s) 377, 381, 700, 1406, 1778
TspGWI ACGGA 1 cut(s) 840
TspRI CASTG 5 cut(s) 328, 445, 745, 1199, 1811
Van91I CCANNNNNTGG 1 cut(s) 1894
VpaK11BI GGWCC 1 cut(s) 173
XagI CCTNNNNNAGG 1 cut(s) 1905
XapI RAATTY 4 cut(s) 429, 883, 1287, 1632
XceI RCATGY 3 cut(s) 34, 728, 1464
XmiI GTMKAC 1 cut(s) 1830
XspI CTAG 5 cut(s) 258, 1280, 1565, 1643, 1715
ZrmI AGTACT 1 cut(s) 1719
Zsp2I ATGCAT 2 cut(s) 643, 772
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.