RchiOBHm_Chr6g0288481

ZnF_TTF

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000122
Physical Location & Seq
Reverse (-)
51729609 .. 51731708
2100 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ25884

Sequence Viewer

Length: 1605 bp
ATGGGTAAAGATTCTGACTCTTTTCATAAGAATGCTGTAAGGGCCTGTGACGACTTGATGAAGCAACCCCAACATATACAGAATGTTGTTGAAAATTATACTTCAAAACAAATTGCAGACAACCGTCTTCGAGTCAAAACTTCAATTGAAGCAGTTCAATGGCTTGCATTTCAAGGTTGTGCTTTTAGAGGTCATGATGAAAGTGTTGATTCAATCAATCCTGGTAATTTTGTGAAACTCTTAGAATTGTTGGCTTCATATAATGAAAAAGTTGCTGAAGATATATTACAGAATGCTCCAAGAAATGCTTCTTACACGTCGCCAAAGATTCAAAAACAAATGTTACAAGCATTTTCAGTAAGAGTAAAAAAGGCCATTCGGGAAGAAATTGATAATTCAAAATTTTGCATAATTGTTGATGAAGTTCATGATGAGTCAAAGAAAGAGCAAATGGCTATAGTATTGAGATTTGTTGACAAAGATGGTTTTATTCGGGAGCCTTTTTTTGGACTTGTTCATGTATCGGACACCAAGGCATCGACATTGCAAAAGGCAATATATTCAGTCTTATCAAATCACAATTTAGATATCCAAAATATTCGAGGCCAAGGACACGATGGTGCAAGTAATATGGGAGGTGAGTGGAATGGGCTACAAGCTTTGATTTTGAAGGATTGTCCGTATGCTTACTATGTTCATTGTTTAGCACATAGATTGCAATTGGCTTTAGTAGCAGCATCGAGAGAAGTTATTCCTATCCAAAAGTTTTTTACTAAATTGACTTTTATTGTCAATATTCTCGGTGCTTCATGCAAGCGTAACGATGAATTTCAAAGCGCTCAAGTAGAAGAGATTGCATATTTGACTTCAATTGATGAACTTGAGACCGGAAGAGGACTTAACCAAATTGGAACCTTGCAGTGTACTAGAGATACTCGTTGGAGTTCGCACTTCAAATCTATTTCTAGTTTGAGACAAAGATTTAGCCTAACTTGTCAGGTTCTTTTGAACATAATTGAGGAAGGGAAGCGTCCTCAAGCAGGAGATGCAGATTTAGCTTATGAGTCAATGACATTGTATCAATTTGTCTTCATCTTCATGGAAGAAATTATGGAGAATACTAATGAACTTTGTCTAGCTTTGCAAAGTCAATCTCAAGACATTTTGAATGCCATGAGTCTTGTGTCCTCTACTAAAACATTCATTCAAAAGTTGAGAGATGATGGATGGGATACTTTATTTGCTAAGGTAAATTCTTTTTGTGAGGCACGTAACATAGATATCCCAGATATGAATGCTCGTTATGTTGGAAGAGGAGGTCGAGCTCGTCACCAACAAGATGATTGGACAATTCAACATTATTACCAGGTAGATATATTTTATGCTGTCATAGATTCTCAATTGCAAGAATTAAGTAATCGGTTTAATGAGCATGCTGTAGAGCTACTTACTCTTAGTTCAGCTTTGGATCCTATTGAAATAAGCAAGTGTTTTAAGATTGATGCCATATGTCAGTTGGTAGAAAAATTCTATCCACATGACTTTGCAGATCATGAGAAGCTGCAACTCAAGAAACATCTTGAATTTTTTGAGTATGATGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

534

Amino Acids

61.09

Weight (kDa)

5.64

Isoelectric Point (pI)

46.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 2 - 217 1.2e-63 Domain of unknown function (DUF4371)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19260 AT1G41920 AT1G42710 AT2G06541 AT2G06541 AT3G29450 AT3G29763 AT3G29765 AT3G31402 AT3G31402 AT4G09660
fragaria_vesca FvH4_1g22711 FvH4_3g10612 FvH4_3g23261 FvH4_3g31623 FvH4_3g33391 FvH4_3g37321 FvH4_3g43192 FvH4_3g43193 FvH4_4g00181 FvH4_4g00251 FvH4_4g08751 FvH4_4g15271 FvH4_5g27190 FvH4_6g02122 FvH4_6g26880 FvH4_6g35121 FvH4_7g16871 FvH4_7g19080 FvH4_7g30071
malus_domestica MD02G1162100.v1.1 MD03G1081700.v1.1 MD09G1280500.v1.1 MD12G1083800.v1.1 MD12G1128200.v1.1
prunus_persica Prupe.7G129800_v2.0.a1
pyrus_communis pycom01g08000 pycom02g13840 pycom02g18030 pycom04g01290 pycom04g12580 pycom05g02550 pycom05g06740 pycom05g26200 pycom07g09850 pycom08g10610 pycom10g11280 pycom11g12580 pycom11g22260 pycom12g18440 pycom13g20080 pycom15g25600 pycom16g23600 pycom17g10070
rosa_chinensis RchiOBHm_Chr1g0313551 RchiOBHm_Chr1g0364331 RchiOBHm_Chr1g0369741 RchiOBHm_Chr1g0380371 RchiOBHm_Chr2g0097391 RchiOBHm_Chr2g0113561 RchiOBHm_Chr2g0114151 RchiOBHm_Chr2g0119761 RchiOBHm_Chr2g0149851 RchiOBHm_Chr2g0151931 RchiOBHm_Chr2g0166411 RchiOBHm_Chr3g0453661 RchiOBHm_Chr3g0466101 RchiOBHm_Chr3g0477911 RchiOBHm_Chr3g0486441 RchiOBHm_Chr4g0390161 RchiOBHm_Chr4g0392191 RchiOBHm_Chr4g0414461 RchiOBHm_Chr4g0421421 RchiOBHm_Chr5g0023801 RchiOBHm_Chr5g0040121 RchiOBHm_Chr5g0045381 RchiOBHm_Chr5g0061511 RchiOBHm_Chr5g0062621 RchiOBHm_Chr5g0064161 RchiOBHm_Chr5g0068711 RchiOBHm_Chr6g0246041 RchiOBHm_Chr6g0252511 RchiOBHm_Chr6g0252521 RchiOBHm_Chr6g0263361 RchiOBHm_Chr6g0269451 RchiOBHm_Chr6g0275351 RchiOBHm_Chr6g0288481 RchiOBHm_Chr6g0310011 RchiOBHm_Chr6g0310021 RchiOBHm_Chr7g0223071 RchiOBHm_Chr7g0227621 RchiOBHm_Chr7g0242581
rosa_laevigata RLG00000033957
rosa_multiflora Rmu_co8455865.1_g000001 Rmu_sc0000021.1_g000011 Rmu_sc0000079.1_g000049 Rmu_sc0000087.1_g000015 Rmu_sc0000151.1_g000008 Rmu_sc0000365.1_g000014 Rmu_sc0000446.1_g000054 Rmu_sc0000446.1_g000055 Rmu_sc0000534.1_g000006 Rmu_sc0000724.1_g000020 Rmu_sc0000859.1_g000001 Rmu_sc0000876.1_g000002 Rmu_sc0000881.1_g000005 Rmu_sc0000929.1_g000014 Rmu_sc0001112.1_g000004 Rmu_sc0001136.1_g000009 Rmu_sc0001353.1_g000064 Rmu_sc0001662.1_g000005 Rmu_sc0001764.1_g000006 Rmu_sc0001982.1_g000015 Rmu_sc0002052.1_g000008 Rmu_sc0002052.1_g000009 Rmu_sc0002158.1_g000011 Rmu_sc0002285.1_g000005 Rmu_sc0002983.1_g000025 Rmu_sc0003063.1_g000006 Rmu_sc0003076.1_g000005 Rmu_sc0003221.1_g000053 Rmu_sc0003382.1_g000010 Rmu_sc0003733.1_g000054 Rmu_sc0003997.1_g000005 Rmu_sc0004283.1_g000008 Rmu_sc0004283.1_g000053 Rmu_sc0004509.1_g000007 Rmu_sc0004540.1_g000028 Rmu_sc0004657.1_g000005 Rmu_sc0004935.1_g000006 Rmu_sc0005072.1_g000003 Rmu_sc0005248.1_g000001 Rmu_sc0006161.1_g000001 Rmu_sc0006209.1_g000005 Rmu_sc0006576.1_g000018 Rmu_sc0006576.1_g000019 Rmu_sc0007121.1_g000016 Rmu_sc0007121.1_g000032 Rmu_sc0007753.1_g000016 Rmu_sc0007795.1_g000009 Rmu_sc0007841.1_g000019 Rmu_sc0008339.1_g000021 Rmu_sc0008339.1_g000022 Rmu_sc0008432.1_g000001 Rmu_sc0008633.1_g000009 Rmu_sc0009104.1_g000013 Rmu_sc0011469.1_g000001 Rmu_sc0012039.1_g000001 Rmu_sc0013947.1_g000007 Rmu_sc0015560.1_g000001 Rmu_sc0017369.1_g000001 Rmu_sc0021648.1_g000001 Rmu_sc0022867.1_g000003 Rmu_sc0027801.1_g000001 Rmu_sc0027801.1_g000002 Rmu_sc0029861.1_g000001 Rmu_sc0030314.1_g000001 Rmu_sc0040149.1_g000001 Rmu_ssc0000089.1_g000028 Rmu_ssc0000480.1_g000033
rosa_roxburghii Rroxscaffold_1G00002540 Rroxscaffold_1G00013960 Rroxscaffold_1G00041160 Rroxscaffold_1G00045580 Rroxscaffold_3G00247310 Rroxscaffold_3G00267070 Rroxscaffold_4G00313830 Rroxscaffold_5G00372270 Rroxscaffold_6G00404800 Rroxscaffold_6G00406090
rosa_rugosa Rorug03G0269800 Rorug04G0142900 Rorug04G0152600 Rorug05G0223300.1 Rorug05G0266400 Rorug06G0008900 Rorug07G0086000 Rorug07G0205800 Rorug07G0270900
rosa_wichuraiana Rw0G001600 Rw0G017220 Rw0G017620 Rw0G018380 Rw1G002320 Rw1G020940 Rw1G021200 Rw1G022610 Rw1G038680 Rw2G013320 Rw2G016850 Rw2G024020 Rw2G025210 Rw2G032270 Rw2G039490 Rw2G041630 Rw2G048450 Rw2G051510 Rw3G025320 Rw4G003260 Rw4G007300 Rw4G009290 Rw4G010910 Rw4G013260 Rw5G008190 Rw5G008290 Rw5G018740 Rw5G023640 Rw5G028800 Rw5G031830 Rw5G041280 Rw5G044050 Rw6G007060 Rw6G008230 Rw6G009960 Rw6G013460 Rw6G014610 Rw6G017780 Rw6G033200 Rw7G021340 Rw7G023750 Rw7G032290 Rw7G032450 Rw7G033880 Rw7G038580 Rw7G040180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 1463, 1476
AcsI RAATTY 5 cut(s) 401, 827, 1252, 1526, 1583
AcuI CTGAAG 1 cut(s) 297
AfaI GTAC 1 cut(s) 925
AfeI AGCGCT 1 cut(s) 838
AfiI CCNNNNNNNGG 2 cut(s) 506, 1040
AflIII ACRYGT 1 cut(s) 315
AjiI CACGTC 1 cut(s) 318
AjnI CCWGG 2 cut(s) 220, 1365
AjuI GAANNNNNNNTTGG 2 cut(s) 292, 324
AleI CACNNNNGTG 1 cut(s) 618
AluBI AGCT 7 cut(s) 659, 1058, 1139, 1325, 1444, 1463, 1561
AluI AGCT 7 cut(s) 659, 1058, 1139, 1325, 1444, 1463, 1561
Alw21I GWGCWC 1 cut(s) 1327
Alw26I GTCTC 2 cut(s) 878, 967
AlwI GGATC 2 cut(s) 1463, 1476
Aor51HI AGCGCT 1 cut(s) 838
AoxI GGCC 3 cut(s) 42, 372, 604
ApeKI GCWGC 2 cut(s) 734, 1561
ApoI RAATTY 5 cut(s) 401, 827, 1252, 1526, 1583
Asp700I GAANNNNTTC 3 cut(s) 153, 307, 750
AspLEI GCGC 1 cut(s) 839
AspS9I GGNCC 1 cut(s) 42
AsuHPI GGTGA 2 cut(s) 650, 1322
BamHI GGATCC 1 cut(s) 1468
BanII GRGCYC 1 cut(s) 1327
BarI GAAGNNNNNNTAC 2 cut(s) 270, 302
BbsI GAAGAC 2 cut(s) 119, 1081
Bbv12I GWGCWC 1 cut(s) 1327
BbvI GCAGC 2 cut(s) 746, 1548
BccI CCATC 4 cut(s) 476, 611, 1217, 1221
BciT130I CCWGG 2 cut(s) 222, 1367
BciVI GTATCC 1 cut(s) 1225
BcoDI GTCTC 2 cut(s) 878, 967
BfaI CTAG 3 cut(s) 927, 966, 1136
BfmI CTRYAG 2 cut(s) 456, 1437
BfoI RGCGCY 1 cut(s) 840
BfuI GTATCC 1 cut(s) 1225
BisI GCNGC 2 cut(s) 735, 1562
BlsI GCNGC 2 cut(s) 736, 1563
Bme1390I CCNGG 2 cut(s) 222, 1367
BmgBI CACGTC 1 cut(s) 318
BmgT120I GGNCC 1 cut(s) 42
BmiI GGNNCC 3 cut(s) 498, 913, 1470
BmrFI CCNGG 2 cut(s) 222, 1367
BmsI GCATC 4 cut(s) 545, 746, 1036, 1492
BoxI GACNNNNGTC 1 cut(s) 123
BpiI GAAGAC 2 cut(s) 119, 1081
Bpu10I CCTNAGC 1 cut(s) 1245
BpuEI CTTGAG 5 cut(s) 825, 902, 1020, 1140, 1553
BsaAI YACGTR 1 cut(s) 1271
BsaI GGTCTC 1 cut(s) 878
BsaJI CCNNGG 2 cut(s) 531, 607
BsaWI WCCGGW 1 cut(s) 887
Bsc4I CCNNNNNNNGG 2 cut(s) 506, 1040
Bse3DI GCAATG 1 cut(s) 542
BseBI CCWGG 2 cut(s) 222, 1367
BseDI CCNNGG 2 cut(s) 531, 607
BseGI GGATG 1 cut(s) 1232
BseLI CCNNNNNNNGG 2 cut(s) 506, 1040
BseMI GCAATG 1 cut(s) 542
BseRI GAGGAG 1 cut(s) 1329
BseXI GCAGC 2 cut(s) 746, 1548
BshFI GGCC 3 cut(s) 44, 374, 606
BsiHKAI GWGCWC 1 cut(s) 1327
BsiSI CCGG 1 cut(s) 888
BslI CCNNNNNNNGG 2 cut(s) 506, 1040
BsmAI GTCTC 2 cut(s) 878, 967
BsmI GAATGC 4 cut(s) 37, 298, 1174, 1300
BsnI GGCC 3 cut(s) 44, 374, 606
Bso31I GGTCTC 1 cut(s) 878
Bsp1286I GDGCHC 1 cut(s) 1327
Bsp143I GATC 2 cut(s) 1468, 1549
BspANI GGCC 3 cut(s) 44, 374, 606
BspHI TCATGA 3 cut(s) 193, 427, 1552
BspLI GGNNCC 3 cut(s) 498, 913, 1470
BspPI GGATC 2 cut(s) 1463, 1476
BspTNI GGTCTC 1 cut(s) 878
BsrDI GCAATG 1 cut(s) 542
BssECI CCNNGG 2 cut(s) 531, 607
BssMI GATC 2 cut(s) 1468, 1549
BssT1I CCWWGG 2 cut(s) 531, 607
Bst2UI CCWGG 2 cut(s) 222, 1367
Bst4CI ACNGT 1 cut(s) 125
Bst6I CTCTTC 3 cut(s) 843, 886, 1306
BstAPI GCANNNNNTGC 1 cut(s) 1046
BstBAI YACGTR 1 cut(s) 1271
BstC8I GCNNGC 3 cut(s) 165, 815, 1434
BstDEI CTNAG 3 cut(s) 241, 1245, 1454
BstENI CCTNNNNNAGG 1 cut(s) 1038
BstF5I GGATG 1 cut(s) 1232
BstH2I RGCGCY 1 cut(s) 840
BstHHI GCGC 1 cut(s) 839
BstKTI GATC 2 cut(s) 1471, 1552
BstMAI GTCTC 2 cut(s) 878, 967
BstMBI GATC 2 cut(s) 1468, 1549
BstMWI GCNNNNNNNGC 4 cut(s) 41, 731, 1046, 1055
BstNI CCWGG 2 cut(s) 222, 1367
BstNSI RCATGY 1 cut(s) 1436
BstPAI GACNNNNGTC 1 cut(s) 123
BstSCI CCNGG 2 cut(s) 220, 1365
BstSFI CTRYAG 2 cut(s) 456, 1437
BstV1I GCAGC 2 cut(s) 746, 1548
BstV2I GAAGAC 2 cut(s) 119, 1081
BstX2I RGATCY 1 cut(s) 1468
BstYI RGATCY 1 cut(s) 1468
BsuI GTATCC 1 cut(s) 1225
BsuRI GGCC 3 cut(s) 44, 374, 606
BtrI CACGTC 1 cut(s) 318
BtsCI GGATG 1 cut(s) 1232
BtsI GCAGTG 1 cut(s) 926
BtsIMutI CAGTG 1 cut(s) 926
Cac8I GCNNGC 3 cut(s) 165, 815, 1434
CciI TCATGA 3 cut(s) 193, 427, 1552
CfoI GCGC 1 cut(s) 839
Cfr13I GGNCC 1 cut(s) 42
CseI GACGC 1 cut(s) 1019
CsiI ACCWGGT 1 cut(s) 1365
Csp6I GTAC 1 cut(s) 924
CviAII CATG 9 cut(s) 194, 428, 518, 810, 1099, 1174, 1433, 1538, 1553
CviQI GTAC 1 cut(s) 924
DdeI CTNAG 3 cut(s) 241, 1245, 1454
DpnI GATC 2 cut(s) 1470, 1551
DpnII GATC 2 cut(s) 1468, 1549
Eam1104I CTCTTC 3 cut(s) 843, 886, 1306
EarI CTCTTC 3 cut(s) 843, 886, 1306
Ecl136II GAGCTC 1 cut(s) 1325
Eco130I CCWWGG 2 cut(s) 531, 607
Eco24I GRGCYC 1 cut(s) 1327
Eco31I GGTCTC 1 cut(s) 878
Eco32I GATATC 2 cut(s) 589, 1282
Eco47III AGCGCT 1 cut(s) 838
Eco53kI GAGCTC 1 cut(s) 1325
Eco57I CTGAAG 1 cut(s) 297
EcoICRI GAGCTC 1 cut(s) 1325
EcoNI CCTNNNNNAGG 1 cut(s) 1038
EcoO109I RGGNCCY 1 cut(s) 42
EcoRII CCWGG 2 cut(s) 220, 1365
EcoRV GATATC 2 cut(s) 589, 1282
EcoT14I CCWWGG 2 cut(s) 531, 607
EcoT38I GRGCYC 1 cut(s) 1327
ErhI CCWWGG 2 cut(s) 531, 607
FaeI CATG 9 cut(s) 197, 431, 521, 813, 1102, 1177, 1436, 1541, 1556
FalI AAGNNNNNCTT 2 cut(s) 292, 324
FatI CATG 9 cut(s) 193, 427, 517, 809, 1098, 1173, 1432, 1537, 1552
FauNDI CATATG 1 cut(s) 1508
Fnu4HI GCNGC 2 cut(s) 735, 1562
FokI GGATG 1 cut(s) 1239
FriOI GRGCYC 1 cut(s) 1327
Fsp4HI GCNGC 2 cut(s) 735, 1562
FspBI CTAG 3 cut(s) 927, 966, 1136
GlaI GCGC 1 cut(s) 838
GluI GCNGC 2 cut(s) 735, 1562
HaeII RGCGCY 1 cut(s) 840
HaeIII GGCC 3 cut(s) 44, 374, 606
HapII CCGG 1 cut(s) 888
HgaI GACGC 1 cut(s) 1019
HhaI GCGC 1 cut(s) 839
Hin1II CATG 9 cut(s) 197, 431, 521, 813, 1102, 1177, 1436, 1541, 1556
Hin6I GCGC 1 cut(s) 837
HinP1I GCGC 1 cut(s) 837
HincII GTYRAC 1 cut(s) 475
HindII GTYRAC 1 cut(s) 475
HindIII AAGCTT 1 cut(s) 657
HinfI GANTC 9 cut(s) 11, 17, 132, 209, 328, 434, 1064, 1177, 1394
HpaII CCGG 1 cut(s) 888
HphI GGTGA 2 cut(s) 650, 1322
Hpy166II GTNNAC 2 cut(s) 475, 924
Hpy188I TCNGA 2 cut(s) 16, 526
Hpy188III TCNNGA 9 cut(s) 194, 380, 428, 494, 741, 1157, 1553, 1570, 1580
Hpy8I GTNNAC 2 cut(s) 475, 924
Hpy99I CGWCG 1 cut(s) 322
HpyAV CCTTC 2 cut(s) 664, 1016
HpyCH4III ACNGT 1 cut(s) 125
HpyCH4IV ACGT 2 cut(s) 317, 1270
HpyF10VI GCNNNNNNNGC 4 cut(s) 41, 731, 1046, 1055
HpyF3I CTNAG 3 cut(s) 241, 1245, 1454
HpySE526I ACGT 2 cut(s) 317, 1270
Hsp92II CATG 9 cut(s) 197, 431, 521, 813, 1102, 1177, 1436, 1541, 1556
HspAI GCGC 1 cut(s) 837
Kzo9I GATC 2 cut(s) 1468, 1549
LmnI GCTCC 2 cut(s) 301, 496
LpnPI CCDG 9 cut(s) 58, 207, 234, 901, 983, 1026, 1299, 1352, 1379
Lsp1109I GCAGC 2 cut(s) 746, 1548
LweI GCATC 4 cut(s) 545, 746, 1036, 1492
MabI ACCWGGT 1 cut(s) 1365
MaeI CTAG 3 cut(s) 927, 966, 1136
MaeII ACGT 2 cut(s) 317, 1270
MaeIII GTNAC 5 cut(s) 47, 342, 818, 1271, 1328
MalI GATC 2 cut(s) 1470, 1551
MboI GATC 2 cut(s) 1468, 1549
MboII GAAGA 9 cut(s) 119, 290, 395, 860, 903, 1081, 1087, 1115, 1323
MfeI CAATTG 4 cut(s) 144, 719, 870, 1400
MflI RGATCY 1 cut(s) 1468
MhlI GDGCHC 1 cut(s) 1327
MlyI GAGTC 5 cut(s) 11, 141, 443, 1073, 1186
MmeI TCCRAC 2 cut(s) 920, 1288
MroXI GAANNNNTTC 3 cut(s) 153, 307, 750
MseI TTAA 4 cut(s) 900, 1412, 1425, 1494
MslI CAYNNNNRTG 3 cut(s) 30, 618, 1097
MspI CCGG 1 cut(s) 888
MspR9I CCNGG 2 cut(s) 222, 1367
MunI CAATTG 4 cut(s) 144, 719, 870, 1400
Mva1269I GAATGC 4 cut(s) 37, 298, 1174, 1300
MvaI CCWGG 2 cut(s) 222, 1367
MwoI GCNNNNNNNGC 4 cut(s) 41, 731, 1046, 1055
NdeI CATATG 1 cut(s) 1508
NdeII GATC 2 cut(s) 1468, 1549
NlaIII CATG 9 cut(s) 197, 431, 521, 813, 1102, 1177, 1436, 1541, 1556
NlaIV GGNNCC 3 cut(s) 498, 913, 1470
NmuCI GTSAC 2 cut(s) 47, 1328
NspI RCATGY 1 cut(s) 1436
OliI CACNNNNGTG 1 cut(s) 618
PaeI GCATGC 1 cut(s) 1436
PagI TCATGA 3 cut(s) 193, 427, 1552
PctI GAATGC 4 cut(s) 37, 298, 1174, 1300
PdmI GAANNNNTTC 3 cut(s) 153, 307, 750
PfeI GAWTC 4 cut(s) 11, 209, 328, 1394
PkrI GCNGC 2 cut(s) 736, 1563
PleI GAGTC 5 cut(s) 11, 140, 442, 1072, 1185
PpsI GAGTC 5 cut(s) 11, 140, 442, 1072, 1185
Ppu21I YACGTR 1 cut(s) 1271
PshAI GACNNNNGTC 1 cut(s) 123
Psp124BI GAGCTC 1 cut(s) 1327
Psp6I CCWGG 2 cut(s) 220, 1365
PspGI CCWGG 2 cut(s) 220, 1365
PspN4I GGNNCC 3 cut(s) 498, 913, 1470
PspPI GGNCC 1 cut(s) 42
PsuI RGATCY 1 cut(s) 1468
RsaI GTAC 1 cut(s) 925
RsaNI GTAC 1 cut(s) 924
RseI CAYNNNNRTG 3 cut(s) 30, 618, 1097
SacI GAGCTC 1 cut(s) 1327
SaqAI TTAA 4 cut(s) 900, 1412, 1425, 1494
SatI GCNGC 2 cut(s) 735, 1562
Sau3AI GATC 2 cut(s) 1468, 1549
Sau96I GGNCC 1 cut(s) 42
SchI GAGTC 5 cut(s) 11, 141, 443, 1073, 1186
ScrFI CCNGG 2 cut(s) 222, 1367
SduI GDGCHC 1 cut(s) 1327
SexAI ACCWGGT 1 cut(s) 1365
SfaNI GCATC 4 cut(s) 545, 746, 1036, 1492
SfcI CTRYAG 2 cut(s) 456, 1437
SmiMI CAYNNNNRTG 3 cut(s) 30, 618, 1097
SmlI CTYRAG 5 cut(s) 840, 881, 1035, 1155, 1568
SmoI CTYRAG 5 cut(s) 840, 881, 1035, 1155, 1568
SphI GCATGC 1 cut(s) 1436
SspI AATATT 2 cut(s) 598, 796
SspMI CTAG 3 cut(s) 927, 966, 1136
SstI GAGCTC 1 cut(s) 1327
StyD4I CCNGG 2 cut(s) 220, 1365
StyI CCWWGG 2 cut(s) 531, 607
TaaI ACNGT 1 cut(s) 125
TaiI ACGT 2 cut(s) 320, 1273
TaqI TCGA 5 cut(s) 130, 539, 601, 740, 1321
TatI WGTACW 1 cut(s) 923
TfiI GAWTC 4 cut(s) 11, 209, 328, 1394
Tru1I TTAA 4 cut(s) 900, 1412, 1425, 1494
Tru9I TTAA 4 cut(s) 900, 1412, 1425, 1494
TscAI CASTG 1 cut(s) 926
TseFI GTSAC 2 cut(s) 47, 1328
TseI GCWGC 2 cut(s) 734, 1561
Tsp45I GTSAC 2 cut(s) 47, 1328
TspGWI ACGGA 1 cut(s) 669
TspRI CASTG 1 cut(s) 926
XagI CCTNNNNNAGG 1 cut(s) 1038
XapI RAATTY 5 cut(s) 401, 827, 1252, 1526, 1583
XceI RCATGY 1 cut(s) 1436
XcmI CCANNNNNNNNNTGG 2 cut(s) 614, 1513
XmnI GAANNNNTTC 3 cut(s) 153, 307, 750
XspI CTAG 3 cut(s) 927, 966, 1136
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.