pycom11g22260

Zinc finger MYM-type protein 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0000122
Physical Location & Seq
Reverse (-)
25251454 .. 25253679
2226 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g22260.1

Sequence Viewer

Length: 2022 bp
ATGAATGACTATCCTTCTAATATTCAAGATGAGGTCCGCAGAGCATATTTGCAAATGGGACCTTGTAGGCCTATAAAGTATGAGTTCCCATACACTTTGCATGCAAAGAAAAAACGACGATTTGTTGTTTCGTGGTTTGAAGAATATGATTGGTTGGAGTATAGTATATCTAAAGATGCGGCATTTTGTCTTCATTGCTATCTCTTTAAAATCAACTTTTCACAATTAGGAAGCGATGCCTTCACTGGGGTAGGCTTTAAGAAATGGAAGAATGCAAGAGAATGTTTTGACAAACATGTTGGTCCTATTGGTAGTTTCCACAATAAAGCTAGAGAAGCGGCTAGTTATCTAATGAACCAAAAGACACATATTGAAGCAGTTGTGATCAAACAATCAGAAGAAGAGTGTATGAAATATCGTCTTTGCTTGAATGCATCAATAGATTGCACTAAGTTCTTGTTGCGACAAGGCCTTCCTTTTCGTGGCCGTGATGAAAGTGTCACTTCGAATAATAGGGGGAATTATTTAGAGCTCTTGCAATTCCTTGCAAATCATGATGAGAAAATAAAGGAAGTTGTGTTGGAAAATGCTCCGGGAAATCTCAAGCTAATAGCTCCTTCAATTCAAAAAGATATTGTCAATTCATGTGCCTTCGAAACTATTAAGGCTATTATGAAAGAAGTGAAAGAGAGTAAATTCTTTTCTATAATGGTAGATGAATCACGTGATATTTCAACAAAGGAGCAAATGGCGGTGATTTTGCGTTATGTGGACAACAAAGGTCAAGTAATTGAAAGGTTCGTGGGAGTCCAACATGTTACCGAAACAACTTCAAGTAAACTAAAGGAGTCCATTGATGAGTTCTTGAAACTACATGACTTGAGCTACTCCAACCTACGAGGTCAAGGTTATGATGGTGCGAGTAATATGAGAGCTCTTGTTGCCGTAGAAAAGAAAAACTCCGATGTTGCCGCTTTTTTCACATTGACTAATAGTTTGGTAAATGTTGTTGGATGCTCATGTAAGCGTCGTGATGCACTTAGAGAGAAACAACAAGAAAATCTCTTGAAAGCTATTGAAAATGATTGTCTTGAAACGGGGCAAGGGTTAAATCAAGAAACTAGTCTCAAACGTGCTGGGGATACACGGTGGAATTCACATTATGGTGCTTTGATTAGTTTGATTACAATGTTCTCATCTGTGGTGGATGTGCTTGACATGATTGTTGAAGATTGCTACAATGATAGTGTTGATCAAGAGATTGTGAATGCAATGGCTTTAGTCAAGACATGTAAAGAACAACTACGTTGCATGAGGAATGATGAAAATTTTGATCTTTTGGTTGATAAAGTATCATCTTTTTGTGTTGAACATGAAATTGAGGTGCCTAATATGGATGATTTATATGTCATTCAAGGGAAGTCATTGCGTAAGGCTCCAAGAAAGACCAATCATCATCATTACAAAGTGGAGCTCTTTTTCGAGGTCATTGATTTCCAACTTACAGAATTAGATGATCGCTTCGCTGAAGGTAATACCGAATTGCTTATTTGCTTGGCATGCTTGAGTCCGAATGATTCATTTGTAGCTTTTGATAAAGAGAAGCTTGTTCGCCTTGCTCATATGTATCCTAAAGATTTCACGGATCGAGATAGATCGGCACTTCAAGATCAACTTGATATTTACATTCATTTTGTGCGTTCTGATAATGATTTTTCTCAATTGCGGGGAATTAATGAGCTTGCTAAGAAAATGGTGGAGAAAGGGTTGCATCGAACATTTGCATATGTATATTTGCTTGTTCAGTTGGCTTTGGTTTTACCGGTTGCAACTGCTTCAGTGGAGAGGGCATTTTCCGCTATGAATATCATTAAGGGTCCACTTCGCAACAAAATGGGAGATCAATGGTTGAGTGACAGCTTAGTTGTTTACATTGAGAAAGATGTTTTTTCATGTATTGGTAATGAAGCTATCATGGAACATTTTCAGACCATGAAACCTCGTCGTGGACGCTTGAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

674

Amino Acids

77.36

Weight (kDa)

6.32

Isoelectric Point (pI)

42.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 79 - 312 1.8e-66 Domain of unknown function (DUF4371)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19260 AT1G41920 AT1G42710 AT2G06541 AT2G06541 AT3G29450 AT3G29763 AT3G29765 AT3G31402 AT3G31402 AT4G09660
fragaria_vesca FvH4_1g22711 FvH4_3g10612 FvH4_3g23261 FvH4_3g31623 FvH4_3g33391 FvH4_3g37321 FvH4_3g43192 FvH4_3g43193 FvH4_4g00181 FvH4_4g00251 FvH4_4g08751 FvH4_4g15271 FvH4_5g27190 FvH4_6g02122 FvH4_6g26880 FvH4_6g35121 FvH4_7g16871 FvH4_7g19080 FvH4_7g30071
malus_domestica MD02G1162100.v1.1 MD03G1081700.v1.1 MD09G1280500.v1.1 MD12G1083800.v1.1 MD12G1128200.v1.1
prunus_persica Prupe.7G129800_v2.0.a1
pyrus_communis pycom01g08000 pycom02g13840 pycom02g18030 pycom04g01290 pycom04g12580 pycom05g02550 pycom05g06740 pycom05g26200 pycom07g09850 pycom08g10610 pycom10g11280 pycom11g12580 pycom11g22260 pycom12g18440 pycom13g20080 pycom15g25600 pycom16g23600 pycom17g10070
rosa_chinensis RchiOBHm_Chr1g0313551 RchiOBHm_Chr1g0364331 RchiOBHm_Chr1g0369741 RchiOBHm_Chr1g0380371 RchiOBHm_Chr2g0097391 RchiOBHm_Chr2g0113561 RchiOBHm_Chr2g0114151 RchiOBHm_Chr2g0119761 RchiOBHm_Chr2g0149851 RchiOBHm_Chr2g0151931 RchiOBHm_Chr2g0166411 RchiOBHm_Chr3g0453661 RchiOBHm_Chr3g0466101 RchiOBHm_Chr3g0477911 RchiOBHm_Chr3g0486441 RchiOBHm_Chr4g0390161 RchiOBHm_Chr4g0392191 RchiOBHm_Chr4g0414461 RchiOBHm_Chr4g0421421 RchiOBHm_Chr5g0023801 RchiOBHm_Chr5g0040121 RchiOBHm_Chr5g0045381 RchiOBHm_Chr5g0061511 RchiOBHm_Chr5g0062621 RchiOBHm_Chr5g0064161 RchiOBHm_Chr5g0068711 RchiOBHm_Chr6g0246041 RchiOBHm_Chr6g0252511 RchiOBHm_Chr6g0252521 RchiOBHm_Chr6g0263361 RchiOBHm_Chr6g0269451 RchiOBHm_Chr6g0275351 RchiOBHm_Chr6g0288481 RchiOBHm_Chr6g0310011 RchiOBHm_Chr6g0310021 RchiOBHm_Chr7g0223071 RchiOBHm_Chr7g0227621 RchiOBHm_Chr7g0242581
rosa_laevigata RLG00000033957
rosa_multiflora Rmu_co8455865.1_g000001 Rmu_sc0000021.1_g000011 Rmu_sc0000079.1_g000049 Rmu_sc0000087.1_g000015 Rmu_sc0000151.1_g000008 Rmu_sc0000365.1_g000014 Rmu_sc0000446.1_g000054 Rmu_sc0000446.1_g000055 Rmu_sc0000534.1_g000006 Rmu_sc0000724.1_g000020 Rmu_sc0000859.1_g000001 Rmu_sc0000876.1_g000002 Rmu_sc0000881.1_g000005 Rmu_sc0000929.1_g000014 Rmu_sc0001112.1_g000004 Rmu_sc0001136.1_g000009 Rmu_sc0001353.1_g000064 Rmu_sc0001662.1_g000005 Rmu_sc0001764.1_g000006 Rmu_sc0001982.1_g000015 Rmu_sc0002052.1_g000008 Rmu_sc0002052.1_g000009 Rmu_sc0002158.1_g000011 Rmu_sc0002285.1_g000005 Rmu_sc0002983.1_g000025 Rmu_sc0003063.1_g000006 Rmu_sc0003076.1_g000005 Rmu_sc0003221.1_g000053 Rmu_sc0003382.1_g000010 Rmu_sc0003733.1_g000054 Rmu_sc0003997.1_g000005 Rmu_sc0004283.1_g000008 Rmu_sc0004283.1_g000053 Rmu_sc0004509.1_g000007 Rmu_sc0004540.1_g000028 Rmu_sc0004657.1_g000005 Rmu_sc0004935.1_g000006 Rmu_sc0005072.1_g000003 Rmu_sc0005248.1_g000001 Rmu_sc0006161.1_g000001 Rmu_sc0006209.1_g000005 Rmu_sc0006576.1_g000018 Rmu_sc0006576.1_g000019 Rmu_sc0007121.1_g000016 Rmu_sc0007121.1_g000032 Rmu_sc0007753.1_g000016 Rmu_sc0007795.1_g000009 Rmu_sc0007841.1_g000019 Rmu_sc0008339.1_g000021 Rmu_sc0008339.1_g000022 Rmu_sc0008432.1_g000001 Rmu_sc0008633.1_g000009 Rmu_sc0009104.1_g000013 Rmu_sc0011469.1_g000001 Rmu_sc0012039.1_g000001 Rmu_sc0013947.1_g000007 Rmu_sc0015560.1_g000001 Rmu_sc0017369.1_g000001 Rmu_sc0021648.1_g000001 Rmu_sc0022867.1_g000003 Rmu_sc0027801.1_g000001 Rmu_sc0027801.1_g000002 Rmu_sc0029861.1_g000001 Rmu_sc0030314.1_g000001 Rmu_sc0040149.1_g000001 Rmu_ssc0000089.1_g000028 Rmu_ssc0000480.1_g000033
rosa_roxburghii Rroxscaffold_1G00002540 Rroxscaffold_1G00013960 Rroxscaffold_1G00041160 Rroxscaffold_1G00045580 Rroxscaffold_3G00247310 Rroxscaffold_3G00267070 Rroxscaffold_4G00313830 Rroxscaffold_5G00372270 Rroxscaffold_6G00404800 Rroxscaffold_6G00406090
rosa_rugosa Rorug03G0269800 Rorug04G0142900 Rorug04G0152600 Rorug05G0223300.1 Rorug05G0266400 Rorug06G0008900 Rorug07G0086000 Rorug07G0205800 Rorug07G0270900
rosa_wichuraiana Rw0G001600 Rw0G017220 Rw0G017620 Rw0G018380 Rw1G002320 Rw1G020940 Rw1G021200 Rw1G022610 Rw1G038680 Rw2G013320 Rw2G016850 Rw2G024020 Rw2G025210 Rw2G032270 Rw2G039490 Rw2G041630 Rw2G048450 Rw2G051510 Rw3G025320 Rw4G003260 Rw4G007300 Rw4G009290 Rw4G010910 Rw4G013260 Rw5G008190 Rw5G008290 Rw5G018740 Rw5G023640 Rw5G028800 Rw5G031830 Rw5G041280 Rw5G044050 Rw6G007060 Rw6G008230 Rw6G009960 Rw6G013460 Rw6G014610 Rw6G017780 Rw6G033200 Rw7G021340 Rw7G023750 Rw7G032290 Rw7G032450 Rw7G033880 Rw7G038580 Rw7G040180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1384
AciI CCGC 7 cut(s) 37, 179, 338, 752, 972, 1726, 1857
AclWI GGATC 1 cut(s) 1653
AcoI YGGCCR 1 cut(s) 484
AcsI RAATTY 3 cut(s) 695, 1153, 1327
AcuI CTGAAG 2 cut(s) 1548, 1821
AcvI CACGTG 1 cut(s) 725
AfiI CCNNNNNNNGG 3 cut(s) 246, 482, 2006
AflIII ACRYGT 3 cut(s) 295, 814, 1289
AgeI ACCGGT 1 cut(s) 1822
AhlI ACTAGT 1 cut(s) 1121
Alw21I GWGCWC 3 cut(s) 534, 937, 1476
Alw26I GTCTC 1 cut(s) 1130
AlwI GGATC 1 cut(s) 1653
AoxI GGCC 3 cut(s) 68, 469, 484
ApoI RAATTY 3 cut(s) 695, 1153, 1327
ArsI GACNNNNNNTTYG 2 cut(s) 979, 1011
AseI ATTAAT 1 cut(s) 1734
AsiGI ACCGGT 1 cut(s) 1822
Asp700I GAANNNNTTC 1 cut(s) 1983
AspS9I GGNCC 4 cut(s) 34, 59, 302, 1877
AsuC2I CCSGG 1 cut(s) 594
AsuHPI GGTGA 1 cut(s) 766
AsuII TTCGAA 2 cut(s) 506, 654
AvaII GGWCC 4 cut(s) 34, 59, 302, 1877
BanI GGYRCC 1 cut(s) 1384
BanII GRGCYC 3 cut(s) 534, 937, 1476
BbrPI CACGTG 1 cut(s) 725
BbsI GAAGAC 1 cut(s) 182
Bbv12I GWGCWC 3 cut(s) 534, 937, 1476
BccI CCATC 1 cut(s) 908
BceAI ACGGC 2 cut(s) 471, 929
BciVI GTATCC 2 cut(s) 1135, 1638
BclI TGATCA 2 cut(s) 384, 1252
BcnI CCSGG 1 cut(s) 594
BcoDI GTCTC 1 cut(s) 1130
BcuI ACTAGT 1 cut(s) 1121
BfaI CTAG 3 cut(s) 330, 342, 1122
BfuI GTATCC 2 cut(s) 1135, 1638
BisI GCNGC 3 cut(s) 180, 339, 972
BlsI GCNGC 3 cut(s) 181, 340, 973
Bme1390I CCNGG 1 cut(s) 594
Bme18I GGWCC 4 cut(s) 34, 59, 302, 1877
BmgT120I GGNCC 4 cut(s) 34, 59, 302, 1877
BmiI GGNNCC 4 cut(s) 60, 1386, 1437, 1878
BmrFI CCNGG 1 cut(s) 594
BmrI ACTGGG 1 cut(s) 255
BmsI GCATC 6 cut(s) 166, 226, 443, 1004, 1024, 1780
BmuI ACTGGG 1 cut(s) 255
BpiI GAAGAC 1 cut(s) 182
Bpu14I TTCGAA 2 cut(s) 506, 654
BpuEI CTTGAG 3 cut(s) 587, 901, 1585
BpuMI CCSGG 1 cut(s) 594
BsaAI YACGTR 1 cut(s) 725
BsaWI WCCGGW 1 cut(s) 1822
BsaXI ACNNNNNCTCC 2 cut(s) 1751, 1781
Bsc4I CCNNNNNNNGG 3 cut(s) 246, 482, 2006
Bse118I RCCGGY 1 cut(s) 1822
Bse1I ACTGG 1 cut(s) 250
Bse3DI GCAATG 3 cut(s) 193, 1278, 1424
BseGI GGATG 3 cut(s) 1019, 1213, 1402
BseLI CCNNNNNNNGG 3 cut(s) 246, 482, 2006
BseMI GCAATG 3 cut(s) 193, 1278, 1424
BseNI ACTGG 1 cut(s) 250
BseYI CCCAGC 1 cut(s) 1136
BshFI GGCC 3 cut(s) 70, 471, 486
BshNI GGYRCC 1 cut(s) 1384
BshTI ACCGGT 1 cut(s) 1822
BsiHKAI GWGCWC 3 cut(s) 534, 937, 1476
BsiSI CCGG 2 cut(s) 593, 1823
BslFI GGGAC 1 cut(s) 72
BslI CCNNNNNNNGG 3 cut(s) 246, 482, 2006
BsmAI GTCTC 1 cut(s) 1130
BsmFI GGGAC 1 cut(s) 72
BsmI GAATGC 3 cut(s) 277, 436, 1273
BsnI GGCC 3 cut(s) 70, 471, 486
Bsp119I TTCGAA 2 cut(s) 506, 654
Bsp1286I GDGCHC 3 cut(s) 534, 937, 1476
Bsp143I GATC 8 cut(s) 384, 1252, 1333, 1516, 1645, 1655, 1669, 1900
BspACI CCGC 7 cut(s) 37, 179, 338, 752, 972, 1726, 1857
BspANI GGCC 3 cut(s) 70, 471, 486
BspHI TCATGA 1 cut(s) 553
BspLI GGNNCC 4 cut(s) 60, 1386, 1437, 1878
BspPI GGATC 1 cut(s) 1653
BspT104I TTCGAA 2 cut(s) 506, 654
BspT107I GGYRCC 1 cut(s) 1384
BsrDI GCAATG 3 cut(s) 193, 1278, 1424
BsrFI RCCGGY 1 cut(s) 1822
BsrI ACTGG 1 cut(s) 250
BssAI RCCGGY 1 cut(s) 1822
BssMI GATC 8 cut(s) 384, 1252, 1333, 1516, 1645, 1655, 1669, 1900
Bst4CI ACNGT 1 cut(s) 1149
Bst6I CTCTTC 1 cut(s) 396
BstBAI YACGTR 1 cut(s) 725
BstBI TTCGAA 2 cut(s) 506, 654
BstC8I GCNNGC 3 cut(s) 102, 1561, 1743
BstDEI CTNAG 4 cut(s) 450, 1040, 1746, 1921
BstF5I GGATG 3 cut(s) 1019, 1213, 1402
BstKTI GATC 8 cut(s) 387, 1255, 1336, 1519, 1648, 1658, 1672, 1903
BstMAI GTCTC 1 cut(s) 1130
BstMBI GATC 8 cut(s) 384, 1252, 1333, 1516, 1645, 1655, 1669, 1900
BstMWI GCNNNNNNNGC 4 cut(s) 335, 941, 1560, 1856
BstNSI RCATGY 5 cut(s) 104, 299, 818, 1293, 1563
BstSCI CCNGG 1 cut(s) 592
BstV2I GAAGAC 1 cut(s) 182
BsuI GTATCC 2 cut(s) 1135, 1638
BsuRI GGCC 3 cut(s) 70, 471, 486
BtgZI GCGATG 1 cut(s) 249
BtsCI GGATG 3 cut(s) 1019, 1213, 1402
BtsIMutI CAGTG 2 cut(s) 243, 1845
Cac8I GCNNGC 3 cut(s) 102, 1561, 1743
CciI TCATGA 1 cut(s) 553
Cfr10I RCCGGY 1 cut(s) 1822
Cfr13I GGNCC 4 cut(s) 34, 59, 302, 1877
CseI GACGC 1 cut(s) 1016
CspAI ACCGGT 1 cut(s) 1822
DdeI CTNAG 4 cut(s) 450, 1040, 1746, 1921
DpnI GATC 8 cut(s) 386, 1254, 1335, 1518, 1647, 1657, 1671, 1902
DpnII GATC 8 cut(s) 384, 1252, 1333, 1516, 1645, 1655, 1669, 1900
DraI TTTAAA 1 cut(s) 208
EaeI YGGCCR 1 cut(s) 484
Eam1104I CTCTTC 1 cut(s) 396
EarI CTCTTC 1 cut(s) 396
Ecl136II GAGCTC 3 cut(s) 532, 935, 1474
Eco147I AGGCCT 2 cut(s) 70, 471
Eco24I GRGCYC 3 cut(s) 534, 937, 1476
Eco47I GGWCC 4 cut(s) 34, 59, 302, 1877
Eco53kI GAGCTC 3 cut(s) 532, 935, 1474
Eco57I CTGAAG 2 cut(s) 1548, 1821
Eco72I CACGTG 1 cut(s) 725
EcoICRI GAGCTC 3 cut(s) 532, 935, 1474
EcoO109I RGGNCCY 1 cut(s) 59
EcoRI GAATTC 1 cut(s) 1153
EcoT22I ATGCAT 1 cut(s) 436
EcoT38I GRGCYC 3 cut(s) 534, 937, 1476
FalI AAGNNNNNCTT 6 cut(s) 487, 519, 1590, 1622, 1659, 1691
FaqI GGGAC 1 cut(s) 72
FauI CCCGC 1 cut(s) 1719
FauNDI CATATG 2 cut(s) 1623, 1786
FbaI TGATCA 2 cut(s) 384, 1252
Fnu4HI GCNGC 3 cut(s) 180, 339, 972
FokI GGATG 3 cut(s) 1026, 1220, 1409
FriOI GRGCYC 3 cut(s) 534, 937, 1476
Fsp4HI GCNGC 3 cut(s) 180, 339, 972
FspBI CTAG 3 cut(s) 330, 342, 1122
GluI GCNGC 3 cut(s) 180, 339, 972
GsaI CCCAGC 1 cut(s) 1140
HaeIII GGCC 3 cut(s) 70, 471, 486
HapII CCGG 2 cut(s) 593, 1823
HgaI GACGC 1 cut(s) 1016
HindIII AAGCTT 1 cut(s) 1604
HinfI GANTC 5 cut(s) 719, 807, 848, 1567, 1577
HpaII CCGG 2 cut(s) 593, 1823
HphI GGTGA 1 cut(s) 766
Hpy166II GTNNAC 5 cut(s) 772, 839, 1880, 1930, 2009
Hpy188I TCNGA 5 cut(s) 397, 964, 1572, 1705, 1989
Hpy8I GTNNAC 5 cut(s) 772, 839, 1880, 1930, 2009
Hpy99I CGWCG 3 cut(s) 120, 1032, 2007
HpyAV CCTTC 6 cut(s) 24, 250, 482, 627, 661, 1523
HpyCH4III ACNGT 1 cut(s) 1149
HpyCH4IV ACGT 3 cut(s) 724, 1132, 1306
HpyF10VI GCNNNNNNNGC 4 cut(s) 335, 941, 1560, 1856
HpyF3I CTNAG 4 cut(s) 450, 1040, 1746, 1921
HpySE526I ACGT 3 cut(s) 724, 1132, 1306
Ksp22I TGATCA 2 cut(s) 384, 1252
Kzo9I GATC 8 cut(s) 384, 1252, 1333, 1516, 1645, 1655, 1669, 1900
LmnI GCTCC 5 cut(s) 595, 619, 742, 1441, 1471
LpnPI CCDG 4 cut(s) 231, 606, 1122, 1836
LweI GCATC 6 cut(s) 166, 226, 443, 1004, 1024, 1780
MaeI CTAG 3 cut(s) 330, 342, 1122
MaeII ACGT 3 cut(s) 724, 1132, 1306
MaeIII GTNAC 3 cut(s) 499, 817, 1913
MalI GATC 8 cut(s) 386, 1254, 1335, 1518, 1647, 1657, 1671, 1902
MboI GATC 8 cut(s) 384, 1252, 1333, 1516, 1645, 1655, 1669, 1900
MboII GAAGA 6 cut(s) 152, 182, 280, 410, 413, 1241
MfeI CAATTG 1 cut(s) 1721
MhlI GDGCHC 3 cut(s) 534, 937, 1476
MlyI GAGTC 3 cut(s) 816, 857, 1576
MmeI TCCRAC 6 cut(s) 135, 561, 835, 915, 991, 1522
MnlI CCTC 7 cut(s) 25, 893, 1308, 1375, 1477, 1839, 2010
Mph1103I ATGCAT 1 cut(s) 436
MroXI GAANNNNTTC 1 cut(s) 1983
MseI TTAA 6 cut(s) 207, 258, 663, 1109, 1734, 1872
MslI CAYNNNNRTG 1 cut(s) 1164
MspI CCGG 2 cut(s) 593, 1823
MspR9I CCNGG 1 cut(s) 594
MunI CAATTG 1 cut(s) 1721
Mva1269I GAATGC 3 cut(s) 277, 436, 1273
MwoI GCNNNNNNNGC 4 cut(s) 335, 941, 1560, 1856
NciI CCSGG 1 cut(s) 594
NdeI CATATG 2 cut(s) 1623, 1786
NdeII GATC 8 cut(s) 384, 1252, 1333, 1516, 1645, 1655, 1669, 1900
NlaIV GGNNCC 4 cut(s) 60, 1386, 1437, 1878
NmuCI GTSAC 2 cut(s) 499, 1913
NsiI ATGCAT 1 cut(s) 436
NspI RCATGY 5 cut(s) 104, 299, 818, 1293, 1563
NspV TTCGAA 2 cut(s) 506, 654
PaeI GCATGC 2 cut(s) 104, 1563
PagI TCATGA 1 cut(s) 553
PceI AGGCCT 2 cut(s) 70, 471
PciI ACATGT 3 cut(s) 295, 814, 1289
PctI GAATGC 3 cut(s) 277, 436, 1273
PdmI GAANNNNTTC 1 cut(s) 1983
PfeI GAWTC 2 cut(s) 719, 1577
PfoI TCCNGGA 1 cut(s) 592
PinAI ACCGGT 1 cut(s) 1822
PkrI GCNGC 3 cut(s) 181, 340, 973
PleI GAGTC 3 cut(s) 815, 856, 1575
PmaCI CACGTG 1 cut(s) 725
PmlI CACGTG 1 cut(s) 725
PpsI GAGTC 3 cut(s) 815, 856, 1575
Ppu21I YACGTR 1 cut(s) 725
PpuMI RGGWCCY 1 cut(s) 59
PscI ACATGT 3 cut(s) 295, 814, 1289
PshBI ATTAAT 1 cut(s) 1734
Psp124BI GAGCTC 3 cut(s) 534, 937, 1476
Psp5II RGGWCCY 1 cut(s) 59
PspCI CACGTG 1 cut(s) 725
PspFI CCCAGC 1 cut(s) 1136
PspN4I GGNNCC 4 cut(s) 60, 1386, 1437, 1878
PspPI GGNCC 4 cut(s) 34, 59, 302, 1877
PspPPI RGGWCCY 1 cut(s) 59
RseI CAYNNNNRTG 1 cut(s) 1164
SacI GAGCTC 3 cut(s) 534, 937, 1476
SaqAI TTAA 6 cut(s) 207, 258, 663, 1109, 1734, 1872
SatI GCNGC 3 cut(s) 180, 339, 972
Sau3AI GATC 8 cut(s) 384, 1252, 1333, 1516, 1645, 1655, 1669, 1900
Sau96I GGNCC 4 cut(s) 34, 59, 302, 1877
SchI GAGTC 3 cut(s) 816, 857, 1576
ScrFI CCNGG 1 cut(s) 594
SduI GDGCHC 3 cut(s) 534, 937, 1476
SfaNI GCATC 6 cut(s) 166, 226, 443, 1004, 1024, 1780
SfuI TTCGAA 2 cut(s) 506, 654
SinI GGWCC 4 cut(s) 34, 59, 302, 1877
SmiMI CAYNNNNRTG 1 cut(s) 1164
SmlI CTYRAG 3 cut(s) 602, 880, 1564
SmoI CTYRAG 3 cut(s) 602, 880, 1564
SpeI ACTAGT 1 cut(s) 1121
SphI GCATGC 2 cut(s) 104, 1563
SseBI AGGCCT 2 cut(s) 70, 471
SsiI CCGC 7 cut(s) 37, 179, 338, 752, 972, 1726, 1857
SspI AATATT 1 cut(s) 22
SspMI CTAG 3 cut(s) 330, 342, 1122
SstI GAGCTC 3 cut(s) 534, 937, 1476
StuI AGGCCT 2 cut(s) 70, 471
StyD4I CCNGG 1 cut(s) 592
TaaI ACNGT 1 cut(s) 1149
TaiI ACGT 3 cut(s) 727, 1135, 1309
TaqI TCGA 5 cut(s) 506, 654, 1482, 1648, 1774
TauI GCSGC 3 cut(s) 182, 341, 974
TfiI GAWTC 2 cut(s) 719, 1577
Tru1I TTAA 6 cut(s) 207, 258, 663, 1109, 1734, 1872
Tru9I TTAA 6 cut(s) 207, 258, 663, 1109, 1734, 1872
TscAI CASTG 2 cut(s) 250, 1845
TseFI GTSAC 2 cut(s) 499, 1913
Tsp45I GTSAC 2 cut(s) 499, 1913
TspGWI ACGGA 1 cut(s) 1658
TspRI CASTG 2 cut(s) 250, 1845
VpaK11BI GGWCC 4 cut(s) 34, 59, 302, 1877
VspI ATTAAT 1 cut(s) 1734
XapI RAATTY 3 cut(s) 695, 1153, 1327
XceI RCATGY 5 cut(s) 104, 299, 818, 1293, 1563
XmnI GAANNNNTTC 1 cut(s) 1983
XspI CTAG 3 cut(s) 330, 342, 1122
Zsp2I ATGCAT 1 cut(s) 436
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.