Rw6G007060

Zinc finger MYM-type protein 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000122
Physical Location & Seq
Forward (+)
11431955 .. 11434306
2352 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G007060.1

Sequence Viewer

Length: 1941 bp
ATGGAGAGATTCTTTAAACGAACATCAAATGAGTTATCATCACCCCTCATAGAGAGTGAAAGATCAAAACAGAGTCGGGTAGAAATTGATTTGGCTAATCTTCCTTCTGATCCTGGAGAAAGAACTAAAATTTCAGATTATCATCCCGATATTAGGGATCAAATTAGAAGAGAGTATCTGCTAAGAGATTATCGAGTTCGACTAGAAGCTTCAGTTGATTGCATTCGGTTTCTTCTAAGACAAGGCCTTGCCTTTCGTGGTCATGACGAGTCAGAGAACTCAAGCAATCAAGGTAACTTTCTTCAGCTTTTGCAATTTCTCGTTGATCACAATGATGAAGTGAGAGCTGTTGCATTGAAGAATGCTCCTGAAAATCTTAGATTGACATCTCCTAGGATTCAAAAGGACATTGTTAATGCTGCTGCTGTTGAAACTACAAATGTTATTATGAGAAACATGAGTGATGCCTTTTTTTCTATCCTAGTTGATGAATCTAGGGATGTATCTGTGAAGGAGAAAATGGCTGTTACCTTTCGTTATGTGGATAAAAATGGGTGTGTGATTGAATCCTTCATAGGCATTGAACATGTAGCAAGTACTACTGCAATCTCACTTAAGAAAGCTATAGATGCACTATTCTCTAAACATGGATTAAGCTTCTCTAGGCTACGTGGTCAAGGTTACGATGGGGCCAGTAATATGAGTGGAGAACTTAATGGTCTGAAGACCCTTATTTTGAAGGAGAACTCGAGTGCTTTTTATGTTCATTGTTTCGCACATCAGCTTCAATTAGCTTTGGTCGGTGTAGCCAAGAAACATGAAATTGTAGGTGCTTTCTTTGCATCAATTGGTAGTGTTGTAAACATTGTTGGGGCATCTTCTAAACGTCGAGACATTCTGCGAGAAAACCAAGCTCTTAAAGTCATTGAGGCACTTAAAGTTGGAGAACTTACAAGTGGACACGGACTCAATCAAGAGACTGAAATTAAGCGTTCATGTGATACGCGTTGGAGCTCACATTATGGTACTCTTCTAAACTTTACTGTCATGTTTTCTTCCATAATTGATGTGTTGGATGAAATAGCATTTGATAAAGTGAGTTCTGATCAGAATTTGCATTTGATGAGAATTATACTTGGAATCACTCATGAGTTATCACAAGCACTACAAAAAGATGATCAGGACATAGTGAATGCTATGGATTTAGTGAAAGTGTGCAAGAGAAAATTGCAGACTTTTAGGGAGAGTGGATGGCTTTCTTTGTTTGAGCAGGTTGTTCTATTTTGTGGAAAAGAGAATATTAGTATTCCAAACATGGATGATCAATATATATGTCCAGGAAAATCAAGGCGTAGAGCTCCTGAAATGACAAATATGCATTACTATCGCTTTGACTTCTTTTGTGCAGTAATTGATTTCCAACTTCAGGAGCTAGATAACCGTTTCAGTGAGGCTACTACTGAACTTCTCCTTTGTTTGGCATCTCTAAGTCCTAATTATTCATTTGCAACTTATAATAAGCAACGTTTGATGCGTCTTGCTAAGCTTTATCCTCATGATTTTTCTGCATCAGAGTTGTTGTTGTTAGAATGTCAGTTAGAGACTTATATTGATGAAATGCGATCTAACAACAAGTTCCAACAATTGCAAGGGATTGCTGATCTTGCAAAGAAATTAGTTGAGACAAGAAAGCATAAGACATATCCTTATGTTTATTTGCTGATCACTTTGGCTCTAGTACTTCCTGTTGCAACAGCCTCTGTTGAAAGAGCTTTCTCTGCCATGAATATTATAAAGAATCGAATTCGCAATCGAATGAGAGATCAATGGATGAATGACTGCTTAATTGTATATCTTGAGAAGGATATATTCAATTCCATTGACAATGAGTCTATTATTCAGCGTTTTCAAAACATGGCACCTTGTAGAGGACAATTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

646

Amino Acids

73.85

Weight (kDa)

7.22

Isoelectric Point (pI)

44.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 61 - 240 1.3e-66 Domain of unknown function (DUF4371)
Dimer_Tnp_hAT PF05699 555 - 622 4.4e-07 hAT family C-terminal dimerisation region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19260 AT1G41920 AT1G42710 AT2G06541 AT2G06541 AT3G29450 AT3G29763 AT3G29765 AT3G31402 AT3G31402 AT4G09660
fragaria_vesca FvH4_1g22711 FvH4_3g10612 FvH4_3g23261 FvH4_3g31623 FvH4_3g33391 FvH4_3g37321 FvH4_3g43192 FvH4_3g43193 FvH4_4g00181 FvH4_4g00251 FvH4_4g08751 FvH4_4g15271 FvH4_5g27190 FvH4_6g02122 FvH4_6g26880 FvH4_6g35121 FvH4_7g16871 FvH4_7g19080 FvH4_7g30071
malus_domestica MD02G1162100.v1.1 MD03G1081700.v1.1 MD09G1280500.v1.1 MD12G1083800.v1.1 MD12G1128200.v1.1
prunus_persica Prupe.7G129800_v2.0.a1
pyrus_communis pycom01g08000 pycom02g13840 pycom02g18030 pycom04g01290 pycom04g12580 pycom05g02550 pycom05g06740 pycom05g26200 pycom07g09850 pycom08g10610 pycom10g11280 pycom11g12580 pycom11g22260 pycom12g18440 pycom13g20080 pycom15g25600 pycom16g23600 pycom17g10070
rosa_chinensis RchiOBHm_Chr1g0313551 RchiOBHm_Chr1g0364331 RchiOBHm_Chr1g0369741 RchiOBHm_Chr1g0380371 RchiOBHm_Chr2g0097391 RchiOBHm_Chr2g0113561 RchiOBHm_Chr2g0114151 RchiOBHm_Chr2g0119761 RchiOBHm_Chr2g0149851 RchiOBHm_Chr2g0151931 RchiOBHm_Chr2g0166411 RchiOBHm_Chr3g0453661 RchiOBHm_Chr3g0466101 RchiOBHm_Chr3g0477911 RchiOBHm_Chr3g0486441 RchiOBHm_Chr4g0390161 RchiOBHm_Chr4g0392191 RchiOBHm_Chr4g0414461 RchiOBHm_Chr4g0421421 RchiOBHm_Chr5g0023801 RchiOBHm_Chr5g0040121 RchiOBHm_Chr5g0045381 RchiOBHm_Chr5g0061511 RchiOBHm_Chr5g0062621 RchiOBHm_Chr5g0064161 RchiOBHm_Chr5g0068711 RchiOBHm_Chr6g0246041 RchiOBHm_Chr6g0252511 RchiOBHm_Chr6g0252521 RchiOBHm_Chr6g0263361 RchiOBHm_Chr6g0269451 RchiOBHm_Chr6g0275351 RchiOBHm_Chr6g0288481 RchiOBHm_Chr6g0310011 RchiOBHm_Chr6g0310021 RchiOBHm_Chr7g0223071 RchiOBHm_Chr7g0227621 RchiOBHm_Chr7g0242581
rosa_laevigata RLG00000033957
rosa_multiflora Rmu_co8455865.1_g000001 Rmu_sc0000021.1_g000011 Rmu_sc0000079.1_g000049 Rmu_sc0000087.1_g000015 Rmu_sc0000151.1_g000008 Rmu_sc0000365.1_g000014 Rmu_sc0000446.1_g000054 Rmu_sc0000446.1_g000055 Rmu_sc0000534.1_g000006 Rmu_sc0000724.1_g000020 Rmu_sc0000859.1_g000001 Rmu_sc0000876.1_g000002 Rmu_sc0000881.1_g000005 Rmu_sc0000929.1_g000014 Rmu_sc0001112.1_g000004 Rmu_sc0001136.1_g000009 Rmu_sc0001353.1_g000064 Rmu_sc0001662.1_g000005 Rmu_sc0001764.1_g000006 Rmu_sc0001982.1_g000015 Rmu_sc0002052.1_g000008 Rmu_sc0002052.1_g000009 Rmu_sc0002158.1_g000011 Rmu_sc0002285.1_g000005 Rmu_sc0002983.1_g000025 Rmu_sc0003063.1_g000006 Rmu_sc0003076.1_g000005 Rmu_sc0003221.1_g000053 Rmu_sc0003382.1_g000010 Rmu_sc0003733.1_g000054 Rmu_sc0003997.1_g000005 Rmu_sc0004283.1_g000008 Rmu_sc0004283.1_g000053 Rmu_sc0004509.1_g000007 Rmu_sc0004540.1_g000028 Rmu_sc0004657.1_g000005 Rmu_sc0004935.1_g000006 Rmu_sc0005072.1_g000003 Rmu_sc0005248.1_g000001 Rmu_sc0006161.1_g000001 Rmu_sc0006209.1_g000005 Rmu_sc0006576.1_g000018 Rmu_sc0006576.1_g000019 Rmu_sc0007121.1_g000016 Rmu_sc0007121.1_g000032 Rmu_sc0007753.1_g000016 Rmu_sc0007795.1_g000009 Rmu_sc0007841.1_g000019 Rmu_sc0008339.1_g000021 Rmu_sc0008339.1_g000022 Rmu_sc0008432.1_g000001 Rmu_sc0008633.1_g000009 Rmu_sc0009104.1_g000013 Rmu_sc0011469.1_g000001 Rmu_sc0012039.1_g000001 Rmu_sc0013947.1_g000007 Rmu_sc0015560.1_g000001 Rmu_sc0017369.1_g000001 Rmu_sc0021648.1_g000001 Rmu_sc0022867.1_g000003 Rmu_sc0027801.1_g000001 Rmu_sc0027801.1_g000002 Rmu_sc0029861.1_g000001 Rmu_sc0030314.1_g000001 Rmu_sc0040149.1_g000001 Rmu_ssc0000089.1_g000028 Rmu_ssc0000480.1_g000033
rosa_roxburghii Rroxscaffold_1G00002540 Rroxscaffold_1G00013960 Rroxscaffold_1G00041160 Rroxscaffold_1G00045580 Rroxscaffold_3G00247310 Rroxscaffold_3G00267070 Rroxscaffold_4G00313830 Rroxscaffold_5G00372270 Rroxscaffold_6G00404800 Rroxscaffold_6G00406090
rosa_rugosa Rorug03G0269800 Rorug04G0142900 Rorug04G0152600 Rorug05G0223300.1 Rorug05G0266400 Rorug06G0008900 Rorug07G0086000 Rorug07G0205800 Rorug07G0270900
rosa_wichuraiana Rw0G001600 Rw0G017220 Rw0G017620 Rw0G018380 Rw1G002320 Rw1G020940 Rw1G021200 Rw1G022610 Rw1G038680 Rw2G013320 Rw2G016850 Rw2G024020 Rw2G025210 Rw2G032270 Rw2G039490 Rw2G041630 Rw2G048450 Rw2G051510 Rw3G025320 Rw4G003260 Rw4G007300 Rw4G009290 Rw4G010910 Rw4G013260 Rw5G008190 Rw5G008290 Rw5G018740 Rw5G023640 Rw5G028800 Rw5G031830 Rw5G041280 Rw5G044050 Rw6G007060 Rw6G008230 Rw6G009960 Rw6G013460 Rw6G014610 Rw6G017780 Rw6G033200 Rw7G021340 Rw7G023750 Rw7G032290 Rw7G032450 Rw7G033880 Rw7G038580 Rw7G040180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1515, 1793
Acc36I ACCTGC 1 cut(s) 1261
AccB1I GGYRCC 1 cut(s) 1918
AccII CGCG 1 cut(s) 1006
AclI AACGTT 1 cut(s) 1525
AclWI GGATC 2 cut(s) 104, 165
AcsI RAATTY 3 cut(s) 129, 1111, 1803
AcuI CTGAAG 4 cut(s) 195, 287, 743, 1409
AfaI GTAC 3 cut(s) 598, 1027, 1740
AfiI CCNNNNNNNGG 4 cut(s) 153, 1426, 1477, 1928
AflII CTTAAG 1 cut(s) 614
AflIII ACRYGT 2 cut(s) 586, 1004
AhdI GACNNNNNGTC 1 cut(s) 1888
AjnI CCWGG 2 cut(s) 112, 1336
Alw21I GWGCWC 2 cut(s) 1016, 1360
Alw26I GTCTC 4 cut(s) 885, 971, 1595, 1676
AlwI GGATC 2 cut(s) 104, 165
AlwNI CAGNNNCTG 1 cut(s) 1760
Ama87I CYCGRG 1 cut(s) 748
AoxI GGCC 2 cut(s) 244, 690
ApeKI GCWGC 2 cut(s) 419, 422
ApoI RAATTY 3 cut(s) 129, 1111, 1803
ArsI GACNNNNNNTTYG 2 cut(s) 718, 750
AspA2I CCTAGG 1 cut(s) 392
AspS9I GGNCC 1 cut(s) 690
AsuHPI GGTGA 1 cut(s) 33
AvaI CYCGRG 1 cut(s) 748
AvrII CCTAGG 1 cut(s) 392
BanI GGYRCC 1 cut(s) 1918
BanII GRGCYC 2 cut(s) 1016, 1360
BbsI GAAGAC 1 cut(s) 731
Bbv12I GWGCWC 2 cut(s) 1016, 1360
BbvI GCAGC 2 cut(s) 406, 409
BccI CCATC 2 cut(s) 680, 1245
BcgI CGANNNNNNTGC 2 cut(s) 1367, 1401
BciT130I CCWGG 2 cut(s) 114, 1338
BclI TGATCA 5 cut(s) 325, 1105, 1177, 1321, 1722
BcoDI GTCTC 4 cut(s) 885, 971, 1595, 1676
BfaI CTAG 7 cut(s) 203, 393, 482, 495, 663, 1433, 1736
BfmI CTRYAG 1 cut(s) 624
BfrI CTTAAG 1 cut(s) 614
BfuAI ACCTGC 1 cut(s) 1261
BisI GCNGC 2 cut(s) 420, 423
BlnI CCTAGG 1 cut(s) 392
BlpI GCTNAGC 1 cut(s) 1542
BlsI GCNGC 2 cut(s) 421, 424
BmcAI AGTACT 2 cut(s) 598, 1740
Bme1390I CCNGG 2 cut(s) 114, 1338
BmeRI GACNNNNNGTC 1 cut(s) 1888
BmeT110I CYCGRG 1 cut(s) 748
BmgT120I GGNCC 1 cut(s) 690
BmiI GGNNCC 2 cut(s) 691, 1920
BmrFI CCNGG 2 cut(s) 114, 1338
BmsI GCATC 7 cut(s) 454, 619, 851, 884, 1490, 1521, 1577
BpiI GAAGAC 1 cut(s) 731
BpmI CTGGAG 1 cut(s) 135
Bpu1102I GCTNAGC 1 cut(s) 1542
BpuEI CTTGAG 2 cut(s) 265, 1877
BsaAI YACGTR 1 cut(s) 671
BsaBI GATNNNNATC 2 cut(s) 141, 385
BsaJI CCNNGG 1 cut(s) 392
Bsc4I CCNNNNNNNGG 4 cut(s) 153, 1426, 1477, 1928
Bse1I ACTGG 1 cut(s) 693
Bse8I GATNNNNATC 2 cut(s) 141, 385
BseBI CCWGG 2 cut(s) 114, 1338
BseDI CCNNGG 1 cut(s) 392
BseGI GGATG 6 cut(s) 142, 505, 1081, 1256, 1324, 1836
BseJI GATNNNNATC 2 cut(s) 141, 385
BseLI CCNNNNNNNGG 4 cut(s) 153, 1426, 1477, 1928
BseNI ACTGG 1 cut(s) 693
BseXI GCAGC 2 cut(s) 406, 409
BsgI GTGCAG 1 cut(s) 1425
Bsh1236I CGCG 1 cut(s) 1006
BshFI GGCC 2 cut(s) 246, 692
BshNI GGYRCC 1 cut(s) 1918
BsiHKAI GWGCWC 2 cut(s) 1016, 1360
BsiHKCI CYCGRG 1 cut(s) 748
BslI CCNNNNNNNGG 4 cut(s) 153, 1426, 1477, 1928
BsmAI GTCTC 4 cut(s) 885, 971, 1595, 1676
BsmI GAATGC 3 cut(s) 222, 367, 1198
BsnI GGCC 2 cut(s) 246, 692
BsoBI CYCGRG 1 cut(s) 748
Bsp1286I GDGCHC 2 cut(s) 1016, 1360
Bsp1720I GCTNAGC 1 cut(s) 1542
BspANI GGCC 2 cut(s) 246, 692
BspFNI CGCG 1 cut(s) 1006
BspHI TCATGA 3 cut(s) 262, 1147, 1555
BspLI GGNNCC 2 cut(s) 691, 1920
BspMI ACCTGC 1 cut(s) 1261
BspPI GGATC 2 cut(s) 104, 165
BspT107I GGYRCC 1 cut(s) 1918
BspTI CTTAAG 1 cut(s) 614
BsrI ACTGG 1 cut(s) 693
BssECI CCNNGG 1 cut(s) 392
BssT1I CCWWGG 1 cut(s) 392
Bst2UI CCWGG 2 cut(s) 114, 1338
Bst4CI ACNGT 2 cut(s) 1045, 1442
Bst6I CTCTTC 2 cut(s) 163, 1035
BstAFI CTTAAG 1 cut(s) 614
BstBAI YACGTR 1 cut(s) 671
BstDEI CTNAG 5 cut(s) 182, 236, 377, 1487, 1542
BstENI CCTNNNNNAGG 1 cut(s) 1926
BstF5I GGATG 6 cut(s) 142, 505, 1081, 1256, 1324, 1836
BstFNI CGCG 1 cut(s) 1006
BstMAI GTCTC 4 cut(s) 885, 971, 1595, 1676
BstMWI GCNNNNNNNGC 4 cut(s) 629, 839, 1664, 1778
BstNI CCWGG 2 cut(s) 114, 1338
BstNSI RCATGY 1 cut(s) 590
BstSCI CCNGG 2 cut(s) 112, 1336
BstSFI CTRYAG 1 cut(s) 624
BstUI CGCG 1 cut(s) 1006
BstV1I GCAGC 2 cut(s) 406, 409
BstV2I GAAGAC 1 cut(s) 731
BsuRI GGCC 2 cut(s) 246, 692
BtsCI GGATG 6 cut(s) 142, 505, 1081, 1256, 1324, 1836
BtsIMutI CAGTG 1 cut(s) 1453
BveI ACCTGC 1 cut(s) 1261
CaiI CAGNNNCTG 1 cut(s) 1760
CciI TCATGA 3 cut(s) 262, 1147, 1555
Cfr13I GGNCC 1 cut(s) 690
CseI GACGC 1 cut(s) 1523
Csp6I GTAC 3 cut(s) 597, 1026, 1739
CviQI GTAC 3 cut(s) 597, 1026, 1739
DdeI CTNAG 5 cut(s) 182, 236, 377, 1487, 1542
DraI TTTAAA 1 cut(s) 16
DriI GACNNNNNGTC 1 cut(s) 1888
Eam1104I CTCTTC 2 cut(s) 163, 1035
Eam1105I GACNNNNNGTC 1 cut(s) 1888
EarI CTCTTC 2 cut(s) 163, 1035
Ecl136II GAGCTC 2 cut(s) 1014, 1358
Eco130I CCWWGG 1 cut(s) 392
Eco147I AGGCCT 1 cut(s) 246
Eco24I GRGCYC 2 cut(s) 1016, 1360
Eco53kI GAGCTC 2 cut(s) 1014, 1358
Eco57I CTGAAG 4 cut(s) 195, 287, 743, 1409
Eco88I CYCGRG 1 cut(s) 748
EcoICRI GAGCTC 2 cut(s) 1014, 1358
EcoNI CCTNNNNNAGG 1 cut(s) 1926
EcoRI GAATTC 1 cut(s) 1803
EcoRII CCWGG 2 cut(s) 112, 1336
EcoT14I CCWWGG 1 cut(s) 392
EcoT22I ATGCAT 1 cut(s) 1380
EcoT38I GRGCYC 2 cut(s) 1016, 1360
ErhI CCWWGG 1 cut(s) 392
FbaI TGATCA 5 cut(s) 325, 1105, 1177, 1321, 1722
Fnu4HI GCNGC 2 cut(s) 420, 423
FokI GGATG 6 cut(s) 129, 512, 1088, 1263, 1331, 1843
FriOI GRGCYC 2 cut(s) 1016, 1360
Fsp4HI GCNGC 2 cut(s) 420, 423
FspBI CTAG 7 cut(s) 203, 393, 482, 495, 663, 1433, 1736
GluI GCNGC 2 cut(s) 420, 423
GsuI CTGGAG 1 cut(s) 135
HaeIII GGCC 2 cut(s) 246, 692
HgaI GACGC 1 cut(s) 1523
HindIII AAGCTT 3 cut(s) 207, 655, 1544
HphI GGTGA 1 cut(s) 33
Hpy166II GTNNAC 2 cut(s) 862, 959
Hpy188I TCNGA 7 cut(s) 109, 136, 274, 723, 1105, 1110, 1573
Hpy8I GTNNAC 2 cut(s) 862, 959
Hpy99I CGWCG 1 cut(s) 891
HpyAV CCTTC 5 cut(s) 114, 505, 580, 733, 1855
HpyCH4III ACNGT 2 cut(s) 1045, 1442
HpyCH4IV ACGT 3 cut(s) 670, 886, 1525
HpyF10VI GCNNNNNNNGC 4 cut(s) 629, 839, 1664, 1778
HpyF3I CTNAG 5 cut(s) 182, 236, 377, 1487, 1542
HpySE526I ACGT 3 cut(s) 670, 886, 1525
Ksp22I TGATCA 5 cut(s) 325, 1105, 1177, 1321, 1722
LmnI GCTCC 4 cut(s) 370, 1011, 1363, 1429
Lsp1109I GCAGC 2 cut(s) 406, 409
LweI GCATC 7 cut(s) 454, 619, 851, 884, 1490, 1521, 1577
MaeI CTAG 7 cut(s) 203, 393, 482, 495, 663, 1433, 1736
MaeII ACGT 3 cut(s) 670, 886, 1525
MaeIII GTNAC 3 cut(s) 293, 526, 680
MboII GAAGA 9 cut(s) 92, 180, 224, 293, 370, 736, 870, 1022, 1047
MfeI CAATTG 2 cut(s) 846, 1643
MhlI GDGCHC 2 cut(s) 1016, 1360
MluI ACGCGT 1 cut(s) 1004
MlyI GAGTC 4 cut(s) 82, 278, 960, 1898
MmeI TCCRAC 5 cut(s) 922, 989, 1053, 1444, 1663
MnlI CCTC 6 cut(s) 56, 922, 1444, 1563, 1768, 1922
Mph1103I ATGCAT 1 cut(s) 1380
MseI TTAA 9 cut(s) 15, 414, 615, 653, 714, 918, 936, 987, 1844
MslI CAYNNNNRTG 1 cut(s) 333
MspCI CTTAAG 1 cut(s) 614
MspR9I CCNGG 2 cut(s) 114, 1338
MunI CAATTG 2 cut(s) 846, 1643
Mva1269I GAATGC 3 cut(s) 222, 367, 1198
MvaI CCWGG 2 cut(s) 114, 1338
MvnI CGCG 1 cut(s) 1006
MwoI GCNNNNNNNGC 4 cut(s) 629, 839, 1664, 1778
NlaIV GGNNCC 2 cut(s) 691, 1920
NsiI ATGCAT 1 cut(s) 1380
NspI RCATGY 1 cut(s) 590
PaeR7I CTCGAG 1 cut(s) 748
PagI TCATGA 3 cut(s) 262, 1147, 1555
PceI AGGCCT 1 cut(s) 246
PciI ACATGT 1 cut(s) 586
PcsI WCGNNNNNNNCGW 1 cut(s) 1531
PctI GAATGC 3 cut(s) 222, 367, 1198
PfeI GAWTC 6 cut(s) 9, 397, 491, 566, 1140, 1798
PfoI TCCNGGA 2 cut(s) 112, 1336
PkrI GCNGC 2 cut(s) 421, 424
PleI GAGTC 4 cut(s) 81, 277, 960, 1897
PpsI GAGTC 4 cut(s) 81, 277, 960, 1897
Ppu21I YACGTR 1 cut(s) 671
PscI ACATGT 1 cut(s) 586
PsiI TTATAA 2 cut(s) 1515, 1793
Psp124BI GAGCTC 2 cut(s) 1016, 1360
Psp1406I AACGTT 1 cut(s) 1525
Psp6I CCWGG 2 cut(s) 112, 1336
PspGI CCWGG 2 cut(s) 112, 1336
PspN4I GGNNCC 2 cut(s) 691, 1920
PspPI GGNCC 1 cut(s) 690
PspXI VCTCGAGB 1 cut(s) 748
PstNI CAGNNNCTG 1 cut(s) 1760
RsaI GTAC 3 cut(s) 598, 1027, 1740
RsaNI GTAC 3 cut(s) 597, 1026, 1739
RseI CAYNNNNRTG 1 cut(s) 333
SacI GAGCTC 2 cut(s) 1016, 1360
SaqAI TTAA 9 cut(s) 15, 414, 615, 653, 714, 918, 936, 987, 1844
SatI GCNGC 2 cut(s) 420, 423
Sau96I GGNCC 1 cut(s) 690
ScaI AGTACT 2 cut(s) 598, 1740
SchI GAGTC 4 cut(s) 82, 278, 960, 1898
ScrFI CCNGG 2 cut(s) 114, 1338
SduI GDGCHC 2 cut(s) 1016, 1360
SfaNI GCATC 7 cut(s) 454, 619, 851, 884, 1490, 1521, 1577
SfcI CTRYAG 1 cut(s) 624
Sfr274I CTCGAG 1 cut(s) 748
SlaI CTCGAG 1 cut(s) 748
SmiMI CAYNNNNRTG 1 cut(s) 333
SmlI CTYRAG 4 cut(s) 280, 614, 748, 1856
SmoI CTYRAG 4 cut(s) 280, 614, 748, 1856
SseBI AGGCCT 1 cut(s) 246
SspI AATATT 2 cut(s) 1300, 1789
SspMI CTAG 7 cut(s) 203, 393, 482, 495, 663, 1433, 1736
SstI GAGCTC 2 cut(s) 1016, 1360
StuI AGGCCT 1 cut(s) 246
StyD4I CCNGG 2 cut(s) 112, 1336
StyI CCWWGG 1 cut(s) 392
TaaI ACNGT 2 cut(s) 1045, 1442
TaiI ACGT 3 cut(s) 673, 889, 1528
TaqI TCGA 6 cut(s) 193, 199, 749, 889, 1801, 1813
TatI WGTACW 2 cut(s) 596, 1738
TfiI GAWTC 6 cut(s) 9, 397, 491, 566, 1140, 1798
Tru1I TTAA 9 cut(s) 15, 414, 615, 653, 714, 918, 936, 987, 1844
Tru9I TTAA 9 cut(s) 15, 414, 615, 653, 714, 918, 936, 987, 1844
TscAI CASTG 1 cut(s) 1453
TseI GCWGC 2 cut(s) 419, 422
TspGWI ACGGA 1 cut(s) 978
TspRI CASTG 1 cut(s) 1453
Vha464I CTTAAG 1 cut(s) 614
XagI CCTNNNNNAGG 1 cut(s) 1926
XapI RAATTY 3 cut(s) 129, 1111, 1803
XceI RCATGY 1 cut(s) 590
XhoI CTCGAG 1 cut(s) 748
XmaJI CCTAGG 1 cut(s) 392
XspI CTAG 7 cut(s) 203, 393, 482, 495, 663, 1433, 1736
ZrmI AGTACT 2 cut(s) 598, 1740
Zsp2I ATGCAT 1 cut(s) 1380
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.