Rw7G032290

Zinc finger MYM-type protein 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000122
Physical Location & Seq
Forward (+)
46823000 .. 46825477
2478 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G032290.1

Sequence Viewer

Length: 2478 bp
ATGAAAGCCTTTTTAGAGAGGTATCATAAGAGAAAAGCAACCGAACAGTTGACACCACCTGAAGCTCCTCAAATAAGAAACACATCCAATGATGGTACTTCAGAACATCATTCTGAAGAATTGAACTTGACAAATCAGTTGGCACCCCCTCAATCCCATCGGACAAATAATGCATCTGAAGATATTGGTACTTCAAAATATTCTGTCAATGAGATTAATATAGAAGATCTTCCTGGAGATCCTGGACTTCGAACTCCGATTTTAGAGTACCATCCTAATGTTCGAGATCGAGTGCGAAGACATTATTTACTGCAAGGTCCTTGTCAACCAAAAAACTATAATTTTCCTCAAACAGAATTTAGTGGTGTTAAGCGAAGGTTTAATGTCAATTGGTTTAACGATCATCCTAGTTGGTTGGAGTATAGTATAGAAAATGATGTTGCATATTGTTTGCATTGTTATCTTTTTAAACCAAATATTGGAGACCAAGCAGGTGGTGATGTATTTGTTGGTACGGGGTTTAATAATTGGAAGAAAAAAGACAAGCTTAAAGATCATGTTGGAGGGATCAATAGCGCTCACAACAATGCTAGAAGAATGTGTGAAGTTTTATTAAATCAAAGACAGCATGTTGATACAGTTTTGGTGAACCAAACACAACAAGATCGGATTAACTATCGCACTCGTTTGAATGCATCAGTTGATTGTGCTCGTTTTCTACTACAACAAGGATTGCCATTTCGTGGTCATGATGAATCTGATTATTCAAATAACCAAGGAAATTTTAGAGAGCTTTTGAAGTGGCATTCTGATAAAGTTGATGATATAAAAAAGGTTGTCTTGAAAAATGCTCCAAGAAATCATCAATTAACATCACCTGATATTCAACATGATATTGTCAAGGCTGCTGCAACTGAAACTCTCAATGTCATAATTAGTGACATTGGTGACGCATTATTCTCTATTTTTGTTGACGAGTCTCGTGATGTATCAGGAAAAGAGCAAATGGCAATTGTATTGCGATATGTGAGCAAAGGACAAGTAATTGAGCATTTTGTTGGTGTTAAACATGTCACTGATACTACTTCTGCATCACTGAAGACAGCCATTGATCAATTCTTTTCAGAGAATGGATTAAGCATATCTAGCCTCCGTGGTCAAGGATATGATGGAGCTAGTAATATGAGAGGAGAATTCAATGGTCTAAAAGCACTTATTTTAAAGGAGAATGGGTCAGCTTTTTATGTTCATTGCTTTGCTCACCAGCTTCAGCTGGCTATTGTGGCTGTAGCAAAAAATCATATCTTAATCTCTAATCTCTTCATGTTTGTTGGTAATCTGGTGAATGTTGTTGGAAGCTCATGTAAACGTCGTGATTCTCTTCGAGAGAAACAAGTCGCCAAGATTATCGAAGAACTTAATATTGGTTCTATTTTAAGTGGGAGGGGCTTGAATCAAGAAACCACCCTAAAGCGAGCTGGTGATACAAGATGGAGCTCACATTATGGTACTTTGATTAGTATCATCAACTTATTTCCATCTTTAGTTGAATTGCTTGAAGAAATAAAAGAGGATGGATCATCTACAGATCAGAAACAAGATGCAAGTAGATTATTAGACTCATTGGAATCATTCGACTTTGTATTTAGTCTGCATTTGATGAAGGTTATGTTGGGGACTACAAATCAATTATCACAGGCATTGCAAAGAAGAGACCAAGATATTGTGAATGCAATGAACTTAGTTAAAGTGTGTAAGGAGCAATTGCAAAATATGAGAGACAATGGATGGGATTCTCTTCTTAGTCAAGTCGTTTCATTTTGTGAAAAACAGGAGATTGATGTTCCTAACATGGATGATGTTCCTTTTATTCCAGGAAAATCATGGCGTAGAGCTCCTAAGGTCACTAATCTGCATAGGTATCGAGTTGAATTATTTTGTGCAGTCATAGATATGCAACTTCAAGAGCTAAATGATCATTTTACAGAGACTACTACCGAGCTACTTCTCTGTATGGCATGTCTTAATCCATCTAATTCATTCTCCGCTTTTAGCAAAGAAAAATTGATTCGGCTTGCTCAGTTTTATCCTAAAGATTTTTCTGCAGTATCTGTCTTGGCTCTTGAAGATGAATTGGACACTTATATATCTGATATGCGAAGCAGTAGTGTGTTTACACAATTGAAAGGAATTAGTGACCTTGGAGAAAAAATGGTTGAGACACAGAAGGACAAGGTTTATCCATTAGTTTACTTGCTCATAACATTGACGCTAATTCTTCCAGTTGCAACTGCCACTGTAGAAAGAGTATTTTCTGCCATGAAGATCATCAAAAGTGATTTGCGAAACCGAATGGGAGACATGTGGATGAATAGCAGCATGATTACATATATCGAGAAAGAAATATTTGATGGTATTGATAATGAAACCATCATGAAAAGATTTCAAAATATGAGCAATCGTCGTGGACAATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

825

Amino Acids

93.79

Weight (kDa)

6.41

Isoelectric Point (pI)

41.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 167 - 401 5.1e-81 Domain of unknown function (DUF4371)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19260 AT1G41920 AT1G42710 AT2G06541 AT2G06541 AT3G29450 AT3G29763 AT3G29765 AT3G31402 AT3G31402 AT4G09660
fragaria_vesca FvH4_1g22711 FvH4_3g10612 FvH4_3g23261 FvH4_3g31623 FvH4_3g33391 FvH4_3g37321 FvH4_3g43192 FvH4_3g43193 FvH4_4g00181 FvH4_4g00251 FvH4_4g08751 FvH4_4g15271 FvH4_5g27190 FvH4_6g02122 FvH4_6g26880 FvH4_6g35121 FvH4_7g16871 FvH4_7g19080 FvH4_7g30071
malus_domestica MD02G1162100.v1.1 MD03G1081700.v1.1 MD09G1280500.v1.1 MD12G1083800.v1.1 MD12G1128200.v1.1
prunus_persica Prupe.7G129800_v2.0.a1
pyrus_communis pycom01g08000 pycom02g13840 pycom02g18030 pycom04g01290 pycom04g12580 pycom05g02550 pycom05g06740 pycom05g26200 pycom07g09850 pycom08g10610 pycom10g11280 pycom11g12580 pycom11g22260 pycom12g18440 pycom13g20080 pycom15g25600 pycom16g23600 pycom17g10070
rosa_chinensis RchiOBHm_Chr1g0313551 RchiOBHm_Chr1g0364331 RchiOBHm_Chr1g0369741 RchiOBHm_Chr1g0380371 RchiOBHm_Chr2g0097391 RchiOBHm_Chr2g0113561 RchiOBHm_Chr2g0114151 RchiOBHm_Chr2g0119761 RchiOBHm_Chr2g0149851 RchiOBHm_Chr2g0151931 RchiOBHm_Chr2g0166411 RchiOBHm_Chr3g0453661 RchiOBHm_Chr3g0466101 RchiOBHm_Chr3g0477911 RchiOBHm_Chr3g0486441 RchiOBHm_Chr4g0390161 RchiOBHm_Chr4g0392191 RchiOBHm_Chr4g0414461 RchiOBHm_Chr4g0421421 RchiOBHm_Chr5g0023801 RchiOBHm_Chr5g0040121 RchiOBHm_Chr5g0045381 RchiOBHm_Chr5g0061511 RchiOBHm_Chr5g0062621 RchiOBHm_Chr5g0064161 RchiOBHm_Chr5g0068711 RchiOBHm_Chr6g0246041 RchiOBHm_Chr6g0252511 RchiOBHm_Chr6g0252521 RchiOBHm_Chr6g0263361 RchiOBHm_Chr6g0269451 RchiOBHm_Chr6g0275351 RchiOBHm_Chr6g0288481 RchiOBHm_Chr6g0310011 RchiOBHm_Chr6g0310021 RchiOBHm_Chr7g0223071 RchiOBHm_Chr7g0227621 RchiOBHm_Chr7g0242581
rosa_laevigata RLG00000033957
rosa_multiflora Rmu_co8455865.1_g000001 Rmu_sc0000021.1_g000011 Rmu_sc0000079.1_g000049 Rmu_sc0000087.1_g000015 Rmu_sc0000151.1_g000008 Rmu_sc0000365.1_g000014 Rmu_sc0000446.1_g000054 Rmu_sc0000446.1_g000055 Rmu_sc0000534.1_g000006 Rmu_sc0000724.1_g000020 Rmu_sc0000859.1_g000001 Rmu_sc0000876.1_g000002 Rmu_sc0000881.1_g000005 Rmu_sc0000929.1_g000014 Rmu_sc0001112.1_g000004 Rmu_sc0001136.1_g000009 Rmu_sc0001353.1_g000064 Rmu_sc0001662.1_g000005 Rmu_sc0001764.1_g000006 Rmu_sc0001982.1_g000015 Rmu_sc0002052.1_g000008 Rmu_sc0002052.1_g000009 Rmu_sc0002158.1_g000011 Rmu_sc0002285.1_g000005 Rmu_sc0002983.1_g000025 Rmu_sc0003063.1_g000006 Rmu_sc0003076.1_g000005 Rmu_sc0003221.1_g000053 Rmu_sc0003382.1_g000010 Rmu_sc0003733.1_g000054 Rmu_sc0003997.1_g000005 Rmu_sc0004283.1_g000008 Rmu_sc0004283.1_g000053 Rmu_sc0004509.1_g000007 Rmu_sc0004540.1_g000028 Rmu_sc0004657.1_g000005 Rmu_sc0004935.1_g000006 Rmu_sc0005072.1_g000003 Rmu_sc0005248.1_g000001 Rmu_sc0006161.1_g000001 Rmu_sc0006209.1_g000005 Rmu_sc0006576.1_g000018 Rmu_sc0006576.1_g000019 Rmu_sc0007121.1_g000016 Rmu_sc0007121.1_g000032 Rmu_sc0007753.1_g000016 Rmu_sc0007795.1_g000009 Rmu_sc0007841.1_g000019 Rmu_sc0008339.1_g000021 Rmu_sc0008339.1_g000022 Rmu_sc0008432.1_g000001 Rmu_sc0008633.1_g000009 Rmu_sc0009104.1_g000013 Rmu_sc0011469.1_g000001 Rmu_sc0012039.1_g000001 Rmu_sc0013947.1_g000007 Rmu_sc0015560.1_g000001 Rmu_sc0017369.1_g000001 Rmu_sc0021648.1_g000001 Rmu_sc0022867.1_g000003 Rmu_sc0027801.1_g000001 Rmu_sc0027801.1_g000002 Rmu_sc0029861.1_g000001 Rmu_sc0030314.1_g000001 Rmu_sc0040149.1_g000001 Rmu_ssc0000089.1_g000028 Rmu_ssc0000480.1_g000033
rosa_roxburghii Rroxscaffold_1G00002540 Rroxscaffold_1G00013960 Rroxscaffold_1G00041160 Rroxscaffold_1G00045580 Rroxscaffold_3G00247310 Rroxscaffold_3G00267070 Rroxscaffold_4G00313830 Rroxscaffold_5G00372270 Rroxscaffold_6G00404800 Rroxscaffold_6G00406090
rosa_rugosa Rorug03G0269800 Rorug04G0142900 Rorug04G0152600 Rorug05G0223300.1 Rorug05G0266400 Rorug06G0008900 Rorug07G0086000 Rorug07G0205800 Rorug07G0270900
rosa_wichuraiana Rw0G001600 Rw0G017220 Rw0G017620 Rw0G018380 Rw1G002320 Rw1G020940 Rw1G021200 Rw1G022610 Rw1G038680 Rw2G013320 Rw2G016850 Rw2G024020 Rw2G025210 Rw2G032270 Rw2G039490 Rw2G041630 Rw2G048450 Rw2G051510 Rw3G025320 Rw4G003260 Rw4G007300 Rw4G009290 Rw4G010910 Rw4G013260 Rw5G008190 Rw5G008290 Rw5G018740 Rw5G023640 Rw5G028800 Rw5G031830 Rw5G041280 Rw5G044050 Rw6G007060 Rw6G008230 Rw6G009960 Rw6G013460 Rw6G014610 Rw6G017780 Rw6G033200 Rw7G021340 Rw7G023750 Rw7G032290 Rw7G032450 Rw7G033880 Rw7G038580 Rw7G040180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 482
Acc36I ACCTGC 1 cut(s) 482
AccB1I GGYRCC 1 cut(s) 142
AccB7I CCANNNNNTGG 2 cut(s) 479, 743
AciI CCGC 1 cut(s) 2046
AclWI GGATC 3 cut(s) 233, 575, 1585
AcsI RAATTY 3 cut(s) 356, 781, 1193
AcuI CTGAAG 6 cut(s) 81, 84, 135, 198, 1118, 1253
AfaI GTAC 5 cut(s) 97, 190, 269, 514, 1510
AfeI AGCGCT 1 cut(s) 577
AfiI CCNNNNNNNGG 2 cut(s) 479, 743
AflIII ACRYGT 2 cut(s) 1069, 2361
AjnI CCWGG 3 cut(s) 232, 241, 1873
AjuI GAANNNNNNNTTGG 4 cut(s) 1407, 1439, 1655, 1687
Alw21I GWGCWC 3 cut(s) 712, 1499, 1897
Alw26I GTCTC 7 cut(s) 477, 984, 1707, 1773, 1982, 2213, 2352
AlwI GGATC 3 cut(s) 233, 575, 1585
AlwNI CAGNNNCTG 1 cut(s) 2111
Aor51HI AGCGCT 1 cut(s) 577
ApeKI GCWGC 3 cut(s) 905, 908, 2376
ApoI RAATTY 3 cut(s) 356, 781, 1193
AseI ATTAAT 1 cut(s) 216
Asp700I GAANNNNTTC 1 cut(s) 228
AspLEI GCGC 1 cut(s) 578
AspS9I GGNCC 1 cut(s) 317
AsuHPI GGTGA 7 cut(s) 509, 658, 867, 959, 1253, 1354, 1493
AsuII TTCGAA 1 cut(s) 250
AvaII GGWCC 1 cut(s) 317
AxyI CCTNAGG 1 cut(s) 1899
BanI GGYRCC 1 cut(s) 142
BanII GRGCYC 2 cut(s) 1499, 1897
BauI CACGAG 1 cut(s) 981
BbsI GAAGAC 2 cut(s) 304, 1106
Bbv12I GWGCWC 3 cut(s) 712, 1499, 1897
BbvI GCAGC 3 cut(s) 892, 895, 2388
BcgI CGANNNNNNTGC 2 cut(s) 1904, 1938
BciT130I CCWGG 3 cut(s) 234, 243, 1875
BclI TGATCA 2 cut(s) 1111, 1975
BcoDI GTCTC 7 cut(s) 477, 984, 1707, 1773, 1982, 2213, 2352
BfaI CTAG 4 cut(s) 408, 591, 1146, 1176
BfmI CTRYAG 4 cut(s) 1287, 1584, 2103, 2298
BfoI RGCGCY 1 cut(s) 579
BfuAI ACCTGC 1 cut(s) 482
BglII AGATCT 1 cut(s) 226
BisI GCNGC 3 cut(s) 906, 909, 2377
BlsI GCNGC 3 cut(s) 907, 910, 2378
Bme1390I CCNGG 3 cut(s) 234, 243, 1875
Bme18I GGWCC 1 cut(s) 317
BmgT120I GGNCC 1 cut(s) 317
BmiI GGNNCC 1 cut(s) 144
BmrFI CCNGG 3 cut(s) 234, 243, 1875
BmsI GCATC 4 cut(s) 182, 704, 1100, 1591
BpiI GAAGAC 2 cut(s) 304, 1106
BpmI CTGGAG 1 cut(s) 255
Bpu14I TTCGAA 1 cut(s) 250
BsaBI GATNNNNATC 1 cut(s) 1520
BsaI GGTCTC 2 cut(s) 477, 1707
BsaJI CCNNGG 3 cut(s) 775, 1153, 2200
BsaXI ACNNNNNCTCC 2 cut(s) 1217, 1247
Bsc4I CCNNNNNNNGG 2 cut(s) 479, 743
Bse1I ACTGG 1 cut(s) 2282
Bse21I CCTNAGG 1 cut(s) 1899
Bse3DI GCAATG 3 cut(s) 1249, 1700, 1740
Bse8I GATNNNNATC 1 cut(s) 1520
BseBI CCWGG 3 cut(s) 234, 243, 1875
BseDI CCNNGG 3 cut(s) 775, 1153, 2200
BseGI GGATG 7 cut(s) 83, 271, 403, 1579, 1793, 1861, 2373
BseJI GATNNNNATC 1 cut(s) 1520
BseLI CCNNNNNNNGG 2 cut(s) 479, 743
BseMI GCAATG 3 cut(s) 1249, 1700, 1740
BseMII CTCAG 1 cut(s) 2093
BseNI ACTGG 1 cut(s) 2282
BseRI GAGGAG 2 cut(s) 57, 1203
BseXI GCAGC 3 cut(s) 892, 895, 2388
BsgI GTGCAG 1 cut(s) 1962
BshNI GGYRCC 1 cut(s) 142
BsiHKAI GWGCWC 3 cut(s) 712, 1499, 1897
BslFI GGGAC 1 cut(s) 1690
BslI CCNNNNNNNGG 2 cut(s) 479, 743
BsmAI GTCTC 7 cut(s) 477, 984, 1707, 1773, 1982, 2213, 2352
BsmFI GGGAC 1 cut(s) 1690
BsmI GAATGC 3 cut(s) 697, 805, 1735
Bso31I GGTCTC 2 cut(s) 477, 1707
Bsp119I TTCGAA 1 cut(s) 250
Bsp1286I GDGCHC 3 cut(s) 712, 1499, 1897
BspACI CCGC 1 cut(s) 2046
BspCNI CTCAG 1 cut(s) 2092
BspHI TCATGA 2 cut(s) 748, 2433
BspLI GGNNCC 1 cut(s) 144
BspMAI CTGCAG 1 cut(s) 2107
BspMI ACCTGC 1 cut(s) 482
BspPI GGATC 3 cut(s) 233, 575, 1585
BspT104I TTCGAA 1 cut(s) 250
BspT107I GGYRCC 1 cut(s) 142
BspTNI GGTCTC 2 cut(s) 477, 1707
BsrDI GCAATG 3 cut(s) 1249, 1700, 1740
BsrI ACTGG 1 cut(s) 2282
BssECI CCNNGG 3 cut(s) 775, 1153, 2200
BssSI CACGAG 1 cut(s) 981
BssT1I CCWWGG 2 cut(s) 775, 2200
Bst2BI CACGAG 1 cut(s) 981
Bst2UI CCWGG 3 cut(s) 234, 243, 1875
Bst4CI ACNGT 3 cut(s) 48, 640, 2299
Bst6I CTCTTC 4 cut(s) 1325, 1386, 1705, 1803
BstBI TTCGAA 1 cut(s) 250
BstC8I GCNNGC 3 cut(s) 1275, 1476, 2076
BstDEI CTNAG 4 cut(s) 1741, 1802, 1899, 2079
BstDSI CCRYGG 1 cut(s) 1153
BstF5I GGATG 7 cut(s) 83, 271, 403, 1579, 1793, 1861, 2373
BstH2I RGCGCY 1 cut(s) 579
BstHHI GCGC 1 cut(s) 578
BstMAI GTCTC 7 cut(s) 477, 984, 1707, 1773, 1982, 2213, 2352
BstMWI GCNNNNNNNGC 2 cut(s) 1146, 1283
BstNI CCWGG 3 cut(s) 234, 243, 1875
BstNSI RCATGY 4 cut(s) 632, 1073, 2022, 2365
BstSCI CCNGG 3 cut(s) 232, 241, 1873
BstSFI CTRYAG 4 cut(s) 1287, 1584, 2103, 2298
BstV1I GCAGC 3 cut(s) 892, 895, 2388
BstV2I GAAGAC 2 cut(s) 304, 1106
BstX2I RGATCY 2 cut(s) 226, 238
BstXI CCANNNNNNTGG 1 cut(s) 494
BstYI RGATCY 2 cut(s) 226, 238
Bsu36I CCTNAGG 1 cut(s) 1899
BtgI CCRYGG 1 cut(s) 1153
BtsCI GGATG 7 cut(s) 83, 271, 403, 1579, 1793, 1861, 2373
BtsIMutI CAGTG 3 cut(s) 1074, 1094, 2295
BveI ACCTGC 1 cut(s) 482
Cac8I GCNNGC 3 cut(s) 1275, 1476, 2076
CaiI CAGNNNCTG 1 cut(s) 2111
CciI TCATGA 2 cut(s) 748, 2433
CfoI GCGC 1 cut(s) 578
Cfr13I GGNCC 1 cut(s) 317
CseI GACGC 2 cut(s) 959, 2278
Csp6I GTAC 5 cut(s) 96, 189, 268, 513, 1509
CspCI CAANNNNNGTGG 1 cut(s) 2446
CviQI GTAC 5 cut(s) 96, 189, 268, 513, 1509
DdeI CTNAG 4 cut(s) 1741, 1802, 1899, 2079
DraI TTTAAA 2 cut(s) 469, 1221
Eam1104I CTCTTC 4 cut(s) 1325, 1386, 1705, 1803
EarI CTCTTC 4 cut(s) 1325, 1386, 1705, 1803
Ecl136II GAGCTC 2 cut(s) 1497, 1895
Eco130I CCWWGG 2 cut(s) 775, 2200
Eco24I GRGCYC 2 cut(s) 1499, 1897
Eco31I GGTCTC 2 cut(s) 477, 1707
Eco47I GGWCC 1 cut(s) 317
Eco47III AGCGCT 1 cut(s) 577
Eco53kI GAGCTC 2 cut(s) 1497, 1895
Eco57I CTGAAG 6 cut(s) 81, 84, 135, 198, 1118, 1253
Eco81I CCTNAGG 1 cut(s) 1899
EcoICRI GAGCTC 2 cut(s) 1497, 1895
EcoO109I RGGNCCY 1 cut(s) 317
EcoRI GAATTC 1 cut(s) 1193
EcoRII CCWGG 3 cut(s) 232, 241, 1873
EcoT14I CCWWGG 2 cut(s) 775, 2200
EcoT22I ATGCAT 2 cut(s) 175, 697
EcoT38I GRGCYC 2 cut(s) 1499, 1897
ErhI CCWWGG 2 cut(s) 775, 2200
FalI AAGNNNNNCTT 4 cut(s) 531, 563, 824, 856
FaqI GGGAC 1 cut(s) 1690
FbaI TGATCA 2 cut(s) 1111, 1975
Fnu4HI GCNGC 3 cut(s) 906, 909, 2377
FokI GGATG 7 cut(s) 70, 258, 390, 1586, 1800, 1868, 2380
FriOI GRGCYC 2 cut(s) 1499, 1897
Fsp4HI GCNGC 3 cut(s) 906, 909, 2377
FspBI CTAG 4 cut(s) 408, 591, 1146, 1176
GlaI GCGC 1 cut(s) 577
GluI GCNGC 3 cut(s) 906, 909, 2377
GsuI CTGGAG 1 cut(s) 255
HaeII RGCGCY 1 cut(s) 579
HgaI GACGC 2 cut(s) 959, 2278
HhaI GCGC 1 cut(s) 578
Hin6I GCGC 1 cut(s) 576
HinP1I GCGC 1 cut(s) 576
HincII GTYRAC 3 cut(s) 51, 326, 973
HindII GTYRAC 3 cut(s) 51, 326, 973
HindIII AAGCTT 1 cut(s) 545
HinfI GANTC 8 cut(s) 755, 977, 1376, 1453, 1619, 1628, 1793, 2068
HphI GGTGA 7 cut(s) 509, 658, 867, 959, 1253, 1354, 1493
Hpy166II GTNNAC 8 cut(s) 51, 326, 649, 973, 1367, 2175, 2251, 2468
Hpy8I GTNNAC 8 cut(s) 51, 326, 649, 973, 1367, 2175, 2251, 2468
Hpy99I CGWCG 2 cut(s) 1374, 2466
HpyAV CCTTC 3 cut(s) 369, 1657, 2221
HpyCH4III ACNGT 3 cut(s) 48, 640, 2299
HpyCH4IV ACGT 1 cut(s) 1369
HpyF10VI GCNNNNNNNGC 2 cut(s) 1146, 1283
HpyF3I CTNAG 4 cut(s) 1741, 1802, 1899, 2079
HpySE526I ACGT 1 cut(s) 1369
HspAI GCGC 1 cut(s) 576
Ksp22I TGATCA 2 cut(s) 1111, 1975
LmnI GCTCC 6 cut(s) 70, 856, 1172, 1494, 1759, 1900
Lsp1109I GCAGC 3 cut(s) 892, 895, 2388
LweI GCATC 4 cut(s) 182, 704, 1100, 1591
MaeI CTAG 4 cut(s) 408, 591, 1146, 1176
MaeII ACGT 1 cut(s) 1369
MaeIII GTNAC 5 cut(s) 938, 947, 1072, 1903, 2195
MfeI CAATTG 5 cut(s) 388, 1011, 1763, 2180, 2471
MflI RGATCY 2 cut(s) 226, 238
MhlI GDGCHC 3 cut(s) 712, 1499, 1897
MlyI GAGTC 2 cut(s) 986, 1613
MmeI TCCRAC 3 cut(s) 396, 541, 1333
MnlI CCTC 9 cut(s) 12, 78, 159, 357, 557, 1160, 1181, 1437, 1564
Mph1103I ATGCAT 2 cut(s) 175, 697
MroXI GAANNNNTTC 1 cut(s) 228
MslI CAYNNNNRTG 4 cut(s) 276, 585, 1952, 2366
MspA1I CMGCKG 1 cut(s) 1273
MspR9I CCNGG 3 cut(s) 234, 243, 1875
MunI CAATTG 5 cut(s) 388, 1011, 1763, 2180, 2471
Mva1269I GAATGC 3 cut(s) 697, 805, 1735
MvaI CCWGG 3 cut(s) 234, 243, 1875
MwoI GCNNNNNNNGC 2 cut(s) 1146, 1283
NlaIV GGNNCC 1 cut(s) 144
NmuCI GTSAC 5 cut(s) 938, 947, 1072, 1903, 2195
NsiI ATGCAT 2 cut(s) 175, 697
NspI RCATGY 4 cut(s) 632, 1073, 2022, 2365
NspV TTCGAA 1 cut(s) 250
PagI TCATGA 2 cut(s) 748, 2433
PaqCI CACCTGC 1 cut(s) 482
PciI ACATGT 2 cut(s) 1069, 2361
PctI GAATGC 3 cut(s) 697, 805, 1735
PdmI GAANNNNTTC 1 cut(s) 228
PfeI GAWTC 6 cut(s) 755, 1376, 1453, 1628, 1793, 2068
PflMI CCANNNNNTGG 2 cut(s) 479, 743
PfoI TCCNGGA 3 cut(s) 232, 241, 1873
PkrI GCNGC 3 cut(s) 907, 910, 2378
PleI GAGTC 2 cut(s) 985, 1613
PpsI GAGTC 2 cut(s) 985, 1613
PpuMI RGGWCCY 1 cut(s) 317
PscI ACATGT 2 cut(s) 1069, 2361
PshBI ATTAAT 1 cut(s) 216
Psp124BI GAGCTC 2 cut(s) 1499, 1897
Psp5II RGGWCCY 1 cut(s) 317
Psp6I CCWGG 3 cut(s) 232, 241, 1873
PspGI CCWGG 3 cut(s) 232, 241, 1873
PspN4I GGNNCC 1 cut(s) 144
PspPI GGNCC 1 cut(s) 317
PspPPI RGGWCCY 1 cut(s) 317
PstI CTGCAG 1 cut(s) 2107
PstNI CAGNNNCTG 1 cut(s) 2111
PsuI RGATCY 2 cut(s) 226, 238
PvuII CAGCTG 1 cut(s) 1273
RsaI GTAC 5 cut(s) 97, 190, 269, 514, 1510
RsaNI GTAC 5 cut(s) 96, 189, 268, 513, 1509
RseI CAYNNNNRTG 4 cut(s) 276, 585, 1952, 2366
SacI GAGCTC 2 cut(s) 1499, 1897
SatI GCNGC 3 cut(s) 906, 909, 2377
Sau96I GGNCC 1 cut(s) 317
SchI GAGTC 2 cut(s) 986, 1613
ScrFI CCNGG 3 cut(s) 234, 243, 1875
SduI GDGCHC 3 cut(s) 712, 1499, 1897
SfaNI GCATC 4 cut(s) 182, 704, 1100, 1591
SfcI CTRYAG 4 cut(s) 1287, 1584, 2103, 2298
SfuI TTCGAA 1 cut(s) 250
SinI GGWCC 1 cut(s) 317
SmiMI CAYNNNNRTG 4 cut(s) 276, 585, 1952, 2366
SsiI CCGC 1 cut(s) 2046
SspI AATATT 4 cut(s) 200, 478, 1423, 2406
SspMI CTAG 4 cut(s) 408, 591, 1146, 1176
SstI GAGCTC 2 cut(s) 1499, 1897
StyD4I CCNGG 3 cut(s) 232, 241, 1873
StyI CCWWGG 2 cut(s) 775, 2200
TaaI ACNGT 3 cut(s) 48, 640, 2299
TaiI ACGT 1 cut(s) 1372
TaqI TCGA 8 cut(s) 250, 283, 289, 1384, 1410, 1635, 1924, 2394
TfiI GAWTC 6 cut(s) 755, 1376, 1453, 1628, 1793, 2068
TscAI CASTG 3 cut(s) 1081, 1101, 2302
TseFI GTSAC 5 cut(s) 938, 947, 1072, 1903, 2195
TseI GCWGC 3 cut(s) 905, 908, 2376
Tsp45I GTSAC 5 cut(s) 938, 947, 1072, 1903, 2195
TspGWI ACGGA 1 cut(s) 1142
TspRI CASTG 3 cut(s) 1081, 1101, 2302
Van91I CCANNNNNTGG 2 cut(s) 479, 743
VpaK11BI GGWCC 1 cut(s) 317
VspI ATTAAT 1 cut(s) 216
XapI RAATTY 3 cut(s) 356, 781, 1193
XceI RCATGY 4 cut(s) 632, 1073, 2022, 2365
XcmI CCANNNNNNNNNTGG 1 cut(s) 1881
XmnI GAANNNNTTC 1 cut(s) 228
XspI CTAG 4 cut(s) 408, 591, 1146, 1176
Zsp2I ATGCAT 2 cut(s) 175, 697
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.