RchiOBHm_Chr5g0062621

Zinc finger MYM-type protein 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000122
Physical Location & Seq
Forward (+)
68326200 .. 68329556
3357 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ33884

Sequence Viewer

Length: 1851 bp
ATGAGTAGCCAAAAAGAAACGACCCAACTGAGACATTCGCAACCACCACATTGTGATTTATTTAGAATTTCTTGGTCCCGAATAGTTCTGTGGTTATGGACAGTGGCGGACGCACATTGTGAAAAATTAAAGATGGAGAGATTCTTTAAACGAACATCAAATGAGTTATCATCACCCCTCATAGAGAGTGAAAGATCAAAACAGAGTTGGGTAGAAATTGATTTGGCTAATCTTCCTTCTGATCCTGGAGAAAGAACTAAAATTTCAGATTATCATCCCGATATTAGGGATCAAATTAGAAGAGAGTATCTGCTAAGAGGTCCTTGTCAGCCTAGAAATCATCAGTTTGTCCAAACACAGTGCGGAGAAGGGAAACGAAGGTGTGTCTCTGATTGGTTTAATGACTTCCCTAATTGGTTAGAATATAGCGTAGCCAAAGATGCTGCATTTTGTTTGTGCTGCTATCTGTTCAAATCAAATGTTGGTGAGCAAGGAGGAGGTGATTGTTTTACTGAGAACTCAAGCAATCAAGGTAACTTTCTTCAGCTTTTGCAATTTCTCGTTGATCACAATGATGAAGTGAGAGCTGTTGCATTGAAGAATGCTCCTGCAAATCTTAGATTGACATCACCTAGGATTCAAAAGGACATTGTTAATGCTACTGCTGTTGAAACTACAAATGTTATTATGAGAAACATGGGTGATGCCTTTTTTTCTATCCTAGTTGATGAATCTAGGGATGTATCTGTGAAGGAGCAAATGGCTGTTACCTTTCGTTATGTGGATAAAAATGGGTGTGTGATTGAATCCTTCATAGGCATTGAACATGTAGCGAGTACTACTGCAATCTCACTTAAGAAAGCTATAGATGCACTATTCTGTAAACATGGACTAAGCTTCTCTAGGCTACGTGGTCAAGGTTACGATGGCGCCAGTAATATGAGTGGAGAACTTAATGGTCTGAAGACCCTTATTTTGAAGGAGAACTCGAGTGCTTTTTATGTTCATTGTTTCGCACATCAGCTTCAATTAGCTTTGGTCGGTGTAGCCAAGAAACATGAAATTCAAGCTCTTAAAGTCATTGAGGCACTTAAAGTTGGAGAACTTACAAGTGGACATGGACTCAATCAAGAAACTGAAATTAAGGGTTCATGTGATACGCGTTGGAGCTCACATTATGGTACTCTTCTAAACTTTACTGTCATGTTTTCTTCCATAATTGATGTGTTGGATGAAATAGCATTTGATAAAGTGAGTTCTGATCAGAAGCATGAAGCTTTTATTTCTTTGAAGTTGCTGCAATCATTTGATTTCATATTCAGTTTGCATTTGATGAGAATTATACTTGGAATCACTCATGAGTTATCACAAGCACTACAAAAAGATGATCAGGACATAGTGAATGCTATGGATTTAGTGAAAGTATGCAAGAGAAAATTCCAGACTTTTAGGGAGAGTGGATGGCTTTCTTTGTTTGAGCAGGTTGTTCTATTTTGTGGAAAAGAGAATATTAGTGTTCCAAACATGGATGATCAATATGTATGTCCAGGAAAATCAAGGCGTAGAGCTCCTGAAATGACAAATATGCATTACTATCGCTTTGACTTCTTTTGTGCAGTAATTGATTTCCAACTTCAGGAGCTAGATAACCGTTTCAGTGAGGCTACTACTGAACTTCTCCTTTGTTTGGCATCTCTAAGTCCTAATTATTCATTTGCAACTTATAATACGCAAAGTTTGATGCGTCTTGCTGAGCTTTATCCTCATGATTTTTCTGCATCAGAGTTGTTGTTGCTAGAATGTCATGATATATATTACTGCGTCCGCCACTGGTTATGGACACTGCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

616

Amino Acids

70.52

Weight (kDa)

6.01

Isoelectric Point (pI)

45.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 167 - 320 1.5e-52 Domain of unknown function (DUF4371)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19260 AT1G41920 AT1G42710 AT2G06541 AT2G06541 AT3G29450 AT3G29763 AT3G29765 AT3G31402 AT3G31402 AT4G09660
fragaria_vesca FvH4_1g22711 FvH4_3g10612 FvH4_3g23261 FvH4_3g31623 FvH4_3g33391 FvH4_3g37321 FvH4_3g43192 FvH4_3g43193 FvH4_4g00181 FvH4_4g00251 FvH4_4g08751 FvH4_4g15271 FvH4_5g27190 FvH4_6g02122 FvH4_6g26880 FvH4_6g35121 FvH4_7g16871 FvH4_7g19080 FvH4_7g30071
malus_domestica MD02G1162100.v1.1 MD03G1081700.v1.1 MD09G1280500.v1.1 MD12G1083800.v1.1 MD12G1128200.v1.1
prunus_persica Prupe.7G129800_v2.0.a1
pyrus_communis pycom01g08000 pycom02g13840 pycom02g18030 pycom04g01290 pycom04g12580 pycom05g02550 pycom05g06740 pycom05g26200 pycom07g09850 pycom08g10610 pycom10g11280 pycom11g12580 pycom11g22260 pycom12g18440 pycom13g20080 pycom15g25600 pycom16g23600 pycom17g10070
rosa_chinensis RchiOBHm_Chr1g0313551 RchiOBHm_Chr1g0364331 RchiOBHm_Chr1g0369741 RchiOBHm_Chr1g0380371 RchiOBHm_Chr2g0097391 RchiOBHm_Chr2g0113561 RchiOBHm_Chr2g0114151 RchiOBHm_Chr2g0119761 RchiOBHm_Chr2g0149851 RchiOBHm_Chr2g0151931 RchiOBHm_Chr2g0166411 RchiOBHm_Chr3g0453661 RchiOBHm_Chr3g0466101 RchiOBHm_Chr3g0477911 RchiOBHm_Chr3g0486441 RchiOBHm_Chr4g0390161 RchiOBHm_Chr4g0392191 RchiOBHm_Chr4g0414461 RchiOBHm_Chr4g0421421 RchiOBHm_Chr5g0023801 RchiOBHm_Chr5g0040121 RchiOBHm_Chr5g0045381 RchiOBHm_Chr5g0061511 RchiOBHm_Chr5g0062621 RchiOBHm_Chr5g0064161 RchiOBHm_Chr5g0068711 RchiOBHm_Chr6g0246041 RchiOBHm_Chr6g0252511 RchiOBHm_Chr6g0252521 RchiOBHm_Chr6g0263361 RchiOBHm_Chr6g0269451 RchiOBHm_Chr6g0275351 RchiOBHm_Chr6g0288481 RchiOBHm_Chr6g0310011 RchiOBHm_Chr6g0310021 RchiOBHm_Chr7g0223071 RchiOBHm_Chr7g0227621 RchiOBHm_Chr7g0242581
rosa_laevigata RLG00000033957
rosa_multiflora Rmu_co8455865.1_g000001 Rmu_sc0000021.1_g000011 Rmu_sc0000079.1_g000049 Rmu_sc0000087.1_g000015 Rmu_sc0000151.1_g000008 Rmu_sc0000365.1_g000014 Rmu_sc0000446.1_g000054 Rmu_sc0000446.1_g000055 Rmu_sc0000534.1_g000006 Rmu_sc0000724.1_g000020 Rmu_sc0000859.1_g000001 Rmu_sc0000876.1_g000002 Rmu_sc0000881.1_g000005 Rmu_sc0000929.1_g000014 Rmu_sc0001112.1_g000004 Rmu_sc0001136.1_g000009 Rmu_sc0001353.1_g000064 Rmu_sc0001662.1_g000005 Rmu_sc0001764.1_g000006 Rmu_sc0001982.1_g000015 Rmu_sc0002052.1_g000008 Rmu_sc0002052.1_g000009 Rmu_sc0002158.1_g000011 Rmu_sc0002285.1_g000005 Rmu_sc0002983.1_g000025 Rmu_sc0003063.1_g000006 Rmu_sc0003076.1_g000005 Rmu_sc0003221.1_g000053 Rmu_sc0003382.1_g000010 Rmu_sc0003733.1_g000054 Rmu_sc0003997.1_g000005 Rmu_sc0004283.1_g000008 Rmu_sc0004283.1_g000053 Rmu_sc0004509.1_g000007 Rmu_sc0004540.1_g000028 Rmu_sc0004657.1_g000005 Rmu_sc0004935.1_g000006 Rmu_sc0005072.1_g000003 Rmu_sc0005248.1_g000001 Rmu_sc0006161.1_g000001 Rmu_sc0006209.1_g000005 Rmu_sc0006576.1_g000018 Rmu_sc0006576.1_g000019 Rmu_sc0007121.1_g000016 Rmu_sc0007121.1_g000032 Rmu_sc0007753.1_g000016 Rmu_sc0007795.1_g000009 Rmu_sc0007841.1_g000019 Rmu_sc0008339.1_g000021 Rmu_sc0008339.1_g000022 Rmu_sc0008432.1_g000001 Rmu_sc0008633.1_g000009 Rmu_sc0009104.1_g000013 Rmu_sc0011469.1_g000001 Rmu_sc0012039.1_g000001 Rmu_sc0013947.1_g000007 Rmu_sc0015560.1_g000001 Rmu_sc0017369.1_g000001 Rmu_sc0021648.1_g000001 Rmu_sc0022867.1_g000003 Rmu_sc0027801.1_g000001 Rmu_sc0027801.1_g000002 Rmu_sc0029861.1_g000001 Rmu_sc0030314.1_g000001 Rmu_sc0040149.1_g000001 Rmu_ssc0000089.1_g000028 Rmu_ssc0000480.1_g000033
rosa_roxburghii Rroxscaffold_1G00002540 Rroxscaffold_1G00013960 Rroxscaffold_1G00041160 Rroxscaffold_1G00045580 Rroxscaffold_3G00247310 Rroxscaffold_3G00267070 Rroxscaffold_4G00313830 Rroxscaffold_5G00372270 Rroxscaffold_6G00404800 Rroxscaffold_6G00406090
rosa_rugosa Rorug03G0269800 Rorug04G0142900 Rorug04G0152600 Rorug05G0223300.1 Rorug05G0266400 Rorug06G0008900 Rorug07G0086000 Rorug07G0205800 Rorug07G0270900
rosa_wichuraiana Rw0G001600 Rw0G017220 Rw0G017620 Rw0G018380 Rw1G002320 Rw1G020940 Rw1G021200 Rw1G022610 Rw1G038680 Rw2G013320 Rw2G016850 Rw2G024020 Rw2G025210 Rw2G032270 Rw2G039490 Rw2G041630 Rw2G048450 Rw2G051510 Rw3G025320 Rw4G003260 Rw4G007300 Rw4G009290 Rw4G010910 Rw4G013260 Rw5G008190 Rw5G008290 Rw5G018740 Rw5G023640 Rw5G028800 Rw5G031830 Rw5G041280 Rw5G044050 Rw6G007060 Rw6G008230 Rw6G009960 Rw6G013460 Rw6G014610 Rw6G017780 Rw6G033200 Rw7G021340 Rw7G023750 Rw7G032290 Rw7G032450 Rw7G033880 Rw7G038580 Rw7G040180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1725
Acc36I ACCTGC 1 cut(s) 1471
AccB1I GGYRCC 1 cut(s) 929
AccII CGCG 1 cut(s) 1162
AciI CCGC 3 cut(s) 107, 363, 1825
AclWI GGATC 2 cut(s) 236, 297
AcsI RAATTY 4 cut(s) 66, 261, 1062, 1436
AcuI CTGAAG 3 cut(s) 527, 983, 1619
AcyI GRCGYC 1 cut(s) 930
AdeI CACNNNGTG 2 cut(s) 53, 119
AfaI GTAC 2 cut(s) 838, 1183
AfiI CCNNNNNNNGG 3 cut(s) 285, 1636, 1687
AflII CTTAAG 1 cut(s) 854
AflIII ACRYGT 2 cut(s) 826, 1160
AjnI CCWGG 2 cut(s) 244, 1546
Alw21I GWGCWC 2 cut(s) 1172, 1570
Alw26I GTCTC 2 cut(s) 25, 391
AlwI GGATC 2 cut(s) 236, 297
Ama87I CYCGRG 1 cut(s) 988
ApeKI GCWGC 3 cut(s) 443, 459, 1297
ApoI RAATTY 4 cut(s) 66, 261, 1062, 1436
ArsI GACNNNNNNTTYG 2 cut(s) 958, 990
AspA2I CCTAGG 1 cut(s) 632
AspLEI GCGC 1 cut(s) 932
AspS9I GGNCC 2 cut(s) 75, 320
AsuHPI GGTGA 5 cut(s) 165, 497, 512, 621, 713
AvaI CYCGRG 1 cut(s) 988
AvaII GGWCC 2 cut(s) 75, 320
AvrII CCTAGG 1 cut(s) 632
BanI GGYRCC 1 cut(s) 929
BanII GRGCYC 2 cut(s) 1172, 1570
BbsI GAAGAC 1 cut(s) 971
Bbv12I GWGCWC 2 cut(s) 1172, 1570
BbvI GCAGC 3 cut(s) 430, 446, 1284
BccI CCATC 3 cut(s) 127, 920, 1455
BcgI CGANNNNNNTGC 2 cut(s) 1577, 1611
BciT130I CCWGG 2 cut(s) 246, 1548
BclI TGATCA 4 cut(s) 565, 1261, 1387, 1531
BcoDI GTCTC 2 cut(s) 25, 391
BfaI CTAG 7 cut(s) 333, 633, 722, 735, 903, 1643, 1796
BfmI CTRYAG 1 cut(s) 864
BfoI RGCGCY 1 cut(s) 933
BfrI CTTAAG 1 cut(s) 854
BfuAI ACCTGC 1 cut(s) 1471
BisI GCNGC 3 cut(s) 444, 460, 1298
BlnI CCTAGG 1 cut(s) 632
BlpI GCTNAGC 1 cut(s) 1752
BlsI GCNGC 3 cut(s) 445, 461, 1299
BmcAI AGTACT 1 cut(s) 838
Bme1390I CCNGG 2 cut(s) 246, 1548
Bme18I GGWCC 2 cut(s) 75, 320
BmeT110I CYCGRG 1 cut(s) 988
BmgT120I GGNCC 2 cut(s) 75, 320
BmiI GGNNCC 2 cut(s) 77, 931
BmrFI CCNGG 2 cut(s) 246, 1548
BmsI GCATC 6 cut(s) 430, 694, 859, 1700, 1731, 1787
BpiI GAAGAC 1 cut(s) 971
BpmI CTGGAG 1 cut(s) 267
Bpu1102I GCTNAGC 1 cut(s) 1752
BpuEI CTTGAG 1 cut(s) 505
BsaAI YACGTR 1 cut(s) 911
BsaBI GATNNNNATC 2 cut(s) 273, 625
BsaHI GRCGYC 1 cut(s) 930
BsaJI CCNNGG 1 cut(s) 632
Bsc4I CCNNNNNNNGG 3 cut(s) 285, 1636, 1687
Bse1I ACTGG 2 cut(s) 933, 1835
Bse8I GATNNNNATC 2 cut(s) 273, 625
BseBI CCWGG 2 cut(s) 246, 1548
BseDI CCNNGG 1 cut(s) 632
BseGI GGATG 5 cut(s) 274, 745, 1237, 1466, 1534
BseJI GATNNNNATC 2 cut(s) 273, 625
BseLI CCNNNNNNNGG 3 cut(s) 285, 1636, 1687
BseMII CTCAG 3 cut(s) 20, 504, 1743
BseNI ACTGG 2 cut(s) 933, 1835
BseRI GAGGAG 1 cut(s) 510
BseXI GCAGC 3 cut(s) 430, 446, 1284
BsgI GTGCAG 1 cut(s) 1635
Bsh1236I CGCG 1 cut(s) 1162
BshNI GGYRCC 1 cut(s) 929
BsiHKAI GWGCWC 2 cut(s) 1172, 1570
BsiHKCI CYCGRG 1 cut(s) 988
BslFI GGGAC 1 cut(s) 61
BslI CCNNNNNNNGG 3 cut(s) 285, 1636, 1687
BsmAI GTCTC 2 cut(s) 25, 391
BsmFI GGGAC 1 cut(s) 61
BsmI GAATGC 2 cut(s) 607, 1408
BsoBI CYCGRG 1 cut(s) 988
Bsp1286I GDGCHC 2 cut(s) 1172, 1570
Bsp143I GATC 7 cut(s) 194, 241, 289, 565, 1261, 1387, 1531
Bsp1720I GCTNAGC 1 cut(s) 1752
BspACI CCGC 3 cut(s) 107, 363, 1825
BspCNI CTCAG 3 cut(s) 21, 505, 1744
BspFNI CGCG 1 cut(s) 1162
BspHI TCATGA 3 cut(s) 1357, 1765, 1804
BspLI GGNNCC 2 cut(s) 77, 931
BspMI ACCTGC 1 cut(s) 1471
BspPI GGATC 2 cut(s) 236, 297
BspT107I GGYRCC 1 cut(s) 929
BspTI CTTAAG 1 cut(s) 854
BsrI ACTGG 2 cut(s) 933, 1835
BssECI CCNNGG 1 cut(s) 632
BssMI GATC 7 cut(s) 194, 241, 289, 565, 1261, 1387, 1531
BssNI GRCGYC 1 cut(s) 930
BssT1I CCWWGG 1 cut(s) 632
Bst2UI CCWGG 2 cut(s) 246, 1548
Bst4CI ACNGT 4 cut(s) 103, 360, 1201, 1652
Bst6I CTCTTC 2 cut(s) 295, 1191
BstACI GRCGYC 1 cut(s) 930
BstAFI CTTAAG 1 cut(s) 854
BstBAI YACGTR 1 cut(s) 911
BstDEI CTNAG 7 cut(s) 29, 314, 513, 617, 893, 1697, 1752
BstF5I GGATG 5 cut(s) 274, 745, 1237, 1466, 1534
BstFNI CGCG 1 cut(s) 1162
BstH2I RGCGCY 1 cut(s) 933
BstHHI GCGC 1 cut(s) 932
BstKTI GATC 7 cut(s) 197, 244, 292, 568, 1264, 1390, 1534
BstMAI GTCTC 2 cut(s) 25, 391
BstMBI GATC 7 cut(s) 194, 241, 289, 565, 1261, 1387, 1531
BstMWI GCNNNNNNNGC 2 cut(s) 440, 869
BstNI CCWGG 2 cut(s) 246, 1548
BstNSI RCATGY 1 cut(s) 830
BstSCI CCNGG 2 cut(s) 244, 1546
BstSFI CTRYAG 1 cut(s) 864
BstUI CGCG 1 cut(s) 1162
BstV1I GCAGC 3 cut(s) 430, 446, 1284
BstV2I GAAGAC 1 cut(s) 971
BtsCI GGATG 5 cut(s) 274, 745, 1237, 1466, 1534
BtsI GCAGTG 1 cut(s) 1841
BtsIMutI CAGTG 5 cut(s) 108, 365, 1663, 1828, 1841
BveI ACCTGC 1 cut(s) 1471
CciI TCATGA 3 cut(s) 1357, 1765, 1804
CfoI GCGC 1 cut(s) 932
Cfr13I GGNCC 2 cut(s) 75, 320
CseI GACGC 3 cut(s) 119, 1733, 1810
Csp6I GTAC 2 cut(s) 837, 1182
CviQI GTAC 2 cut(s) 837, 1182
DdeI CTNAG 7 cut(s) 29, 314, 513, 617, 893, 1697, 1752
DinI GGCGCC 1 cut(s) 931
DpnI GATC 7 cut(s) 196, 243, 291, 567, 1263, 1389, 1533
DpnII GATC 7 cut(s) 194, 241, 289, 565, 1261, 1387, 1531
DraI TTTAAA 1 cut(s) 148
DraIII CACNNNGTG 2 cut(s) 53, 119
Eam1104I CTCTTC 2 cut(s) 295, 1191
EarI CTCTTC 2 cut(s) 295, 1191
EciI GGCGGA 2 cut(s) 122, 1814
Ecl136II GAGCTC 2 cut(s) 1170, 1568
Eco130I CCWWGG 1 cut(s) 632
Eco24I GRGCYC 2 cut(s) 1172, 1570
Eco47I GGWCC 2 cut(s) 75, 320
Eco53kI GAGCTC 2 cut(s) 1170, 1568
Eco57I CTGAAG 3 cut(s) 527, 983, 1619
Eco88I CYCGRG 1 cut(s) 988
EcoICRI GAGCTC 2 cut(s) 1170, 1568
EcoO109I RGGNCCY 1 cut(s) 320
EcoRII CCWGG 2 cut(s) 244, 1546
EcoT14I CCWWGG 1 cut(s) 632
EcoT22I ATGCAT 1 cut(s) 1590
EcoT38I GRGCYC 2 cut(s) 1172, 1570
EgeI GGCGCC 1 cut(s) 931
EheI GGCGCC 1 cut(s) 931
ErhI CCWWGG 1 cut(s) 632
FalI AAGNNNNNCTT 2 cut(s) 307, 339
FaqI GGGAC 1 cut(s) 61
FbaI TGATCA 4 cut(s) 565, 1261, 1387, 1531
Fnu4HI GCNGC 3 cut(s) 444, 460, 1298
FokI GGATG 5 cut(s) 261, 752, 1244, 1473, 1541
FriOI GRGCYC 2 cut(s) 1172, 1570
Fsp4HI GCNGC 3 cut(s) 444, 460, 1298
FspBI CTAG 7 cut(s) 333, 633, 722, 735, 903, 1643, 1796
GlaI GCGC 1 cut(s) 931
GluI GCNGC 3 cut(s) 444, 460, 1298
GsuI CTGGAG 1 cut(s) 267
HaeII RGCGCY 1 cut(s) 933
HgaI GACGC 3 cut(s) 119, 1733, 1810
HhaI GCGC 1 cut(s) 932
Hin1I GRCGYC 1 cut(s) 930
Hin6I GCGC 1 cut(s) 930
HinP1I GCGC 1 cut(s) 930
HindIII AAGCTT 2 cut(s) 895, 1275
HinfI GANTC 6 cut(s) 141, 637, 731, 806, 1122, 1350
HphI GGTGA 5 cut(s) 165, 497, 512, 621, 713
Hpy166II GTNNAC 2 cut(s) 884, 1115
Hpy188I TCNGA 7 cut(s) 241, 268, 391, 963, 1261, 1266, 1783
Hpy8I GTNNAC 2 cut(s) 884, 1115
HpyAV CCTTC 6 cut(s) 246, 362, 372, 745, 820, 973
HpyCH4III ACNGT 4 cut(s) 103, 360, 1201, 1652
HpyCH4IV ACGT 1 cut(s) 910
HpyF10VI GCNNNNNNNGC 2 cut(s) 440, 869
HpyF3I CTNAG 7 cut(s) 29, 314, 513, 617, 893, 1697, 1752
HpySE526I ACGT 1 cut(s) 910
Hsp92I GRCGYC 1 cut(s) 930
HspAI GCGC 1 cut(s) 930
KasI GGCGCC 1 cut(s) 929
Ksp22I TGATCA 4 cut(s) 565, 1261, 1387, 1531
Kzo9I GATC 7 cut(s) 194, 241, 289, 565, 1261, 1387, 1531
LmnI GCTCC 5 cut(s) 610, 754, 1167, 1573, 1639
Lsp1109I GCAGC 3 cut(s) 430, 446, 1284
LweI GCATC 6 cut(s) 430, 694, 859, 1700, 1731, 1787
MaeI CTAG 7 cut(s) 333, 633, 722, 735, 903, 1643, 1796
MaeII ACGT 1 cut(s) 910
MaeIII GTNAC 3 cut(s) 533, 766, 920
MalI GATC 7 cut(s) 196, 243, 291, 567, 1263, 1389, 1533
MboI GATC 7 cut(s) 194, 241, 289, 565, 1261, 1387, 1531
MboII GAAGA 7 cut(s) 224, 312, 533, 610, 976, 1178, 1203
MhlI GDGCHC 2 cut(s) 1172, 1570
MluI ACGCGT 1 cut(s) 1160
Mly113I GGCGCC 1 cut(s) 930
MlyI GAGTC 1 cut(s) 1116
MmeI TCCRAC 4 cut(s) 1078, 1145, 1209, 1654
MnlI CCTC 7 cut(s) 188, 311, 488, 491, 1078, 1654, 1773
Mph1103I ATGCAT 1 cut(s) 1590
MseI TTAA 9 cut(s) 128, 147, 399, 654, 855, 954, 1074, 1092, 1143
MslI CAYNNNNRTG 1 cut(s) 573
MspCI CTTAAG 1 cut(s) 854
MspR9I CCNGG 2 cut(s) 246, 1548
Mva1269I GAATGC 2 cut(s) 607, 1408
MvaI CCWGG 2 cut(s) 246, 1548
MvnI CGCG 1 cut(s) 1162
MwoI GCNNNNNNNGC 2 cut(s) 440, 869
NarI GGCGCC 1 cut(s) 930
NdeII GATC 7 cut(s) 194, 241, 289, 565, 1261, 1387, 1531
NlaIV GGNNCC 2 cut(s) 77, 931
NsiI ATGCAT 1 cut(s) 1590
NspI RCATGY 1 cut(s) 830
PaeR7I CTCGAG 1 cut(s) 988
PagI TCATGA 3 cut(s) 1357, 1765, 1804
PciI ACATGT 1 cut(s) 826
PctI GAATGC 2 cut(s) 607, 1408
PfeI GAWTC 5 cut(s) 141, 637, 731, 806, 1350
PfoI TCCNGGA 2 cut(s) 244, 1546
PkrI GCNGC 3 cut(s) 445, 461, 1299
PleI GAGTC 1 cut(s) 1116
PluTI GGCGCC 1 cut(s) 933
PpsI GAGTC 1 cut(s) 1116
Ppu21I YACGTR 1 cut(s) 911
PpuMI RGGWCCY 1 cut(s) 320
PscI ACATGT 1 cut(s) 826
PsiI TTATAA 1 cut(s) 1725
Psp124BI GAGCTC 2 cut(s) 1172, 1570
Psp5II RGGWCCY 1 cut(s) 320
Psp6I CCWGG 2 cut(s) 244, 1546
PspGI CCWGG 2 cut(s) 244, 1546
PspN4I GGNNCC 2 cut(s) 77, 931
PspPI GGNCC 2 cut(s) 75, 320
PspPPI RGGWCCY 1 cut(s) 320
PspXI VCTCGAGB 1 cut(s) 988
RsaI GTAC 2 cut(s) 838, 1183
RsaNI GTAC 2 cut(s) 837, 1182
RseI CAYNNNNRTG 1 cut(s) 573
SacI GAGCTC 2 cut(s) 1172, 1570
SaqAI TTAA 9 cut(s) 128, 147, 399, 654, 855, 954, 1074, 1092, 1143
SatI GCNGC 3 cut(s) 444, 460, 1298
Sau3AI GATC 7 cut(s) 194, 241, 289, 565, 1261, 1387, 1531
Sau96I GGNCC 2 cut(s) 75, 320
ScaI AGTACT 1 cut(s) 838
SchI GAGTC 1 cut(s) 1116
ScrFI CCNGG 2 cut(s) 246, 1548
SduI GDGCHC 2 cut(s) 1172, 1570
SfaNI GCATC 6 cut(s) 430, 694, 859, 1700, 1731, 1787
SfcI CTRYAG 1 cut(s) 864
SfoI GGCGCC 1 cut(s) 931
Sfr274I CTCGAG 1 cut(s) 988
SinI GGWCC 2 cut(s) 75, 320
SlaI CTCGAG 1 cut(s) 988
SmiMI CAYNNNNRTG 1 cut(s) 573
SmlI CTYRAG 3 cut(s) 520, 854, 988
SmoI CTYRAG 3 cut(s) 520, 854, 988
SsiI CCGC 3 cut(s) 107, 363, 1825
SspDI GGCGCC 1 cut(s) 929
SspI AATATT 1 cut(s) 1510
SspMI CTAG 7 cut(s) 333, 633, 722, 735, 903, 1643, 1796
SstI GAGCTC 2 cut(s) 1172, 1570
StyD4I CCNGG 2 cut(s) 244, 1546
StyI CCWWGG 1 cut(s) 632
TaaI ACNGT 4 cut(s) 103, 360, 1201, 1652
TaiI ACGT 1 cut(s) 913
TaqI TCGA 1 cut(s) 989
TatI WGTACW 1 cut(s) 836
TfiI GAWTC 5 cut(s) 141, 637, 731, 806, 1350
Tru1I TTAA 9 cut(s) 128, 147, 399, 654, 855, 954, 1074, 1092, 1143
Tru9I TTAA 9 cut(s) 128, 147, 399, 654, 855, 954, 1074, 1092, 1143
TscAI CASTG 5 cut(s) 108, 365, 1663, 1835, 1848
TseI GCWGC 3 cut(s) 443, 459, 1297
TspRI CASTG 5 cut(s) 108, 365, 1663, 1835, 1848
Vha464I CTTAAG 1 cut(s) 854
VpaK11BI GGWCC 2 cut(s) 75, 320
XapI RAATTY 4 cut(s) 66, 261, 1062, 1436
XceI RCATGY 1 cut(s) 830
XhoI CTCGAG 1 cut(s) 988
XmaJI CCTAGG 1 cut(s) 632
XspI CTAG 7 cut(s) 333, 633, 722, 735, 903, 1643, 1796
ZrmI AGTACT 1 cut(s) 838
Zsp2I ATGCAT 1 cut(s) 1590
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.