Rw2G032270

Zinc finger MYM-type protein 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000122
Physical Location & Seq
Forward (+)
53177873 .. 53180224
2352 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G032270.1

Sequence Viewer

Length: 1926 bp
ATGGAGAGAGTCTTTAAACGATCATCAAATGAGTTATCATCACCCCTCATAGAGAGTGAAAGATCAAAACAGAGTCGGGTAGAAATTGATTTGGCTAATATTCCATCTGATCCTGGAGAAAGAACTAAAATTTTAGATTATCATCCCGATATTAGGGATCAAATTAGAAGAGAGTATCTGCTAAGAGATTATCGAGTTCAACTAGAAGCTTCAGTTGATTGCATTCGGTTTCTTCTAAGACGAGGCCTTGCCTTTCGTGGTCATGACGAGTCAGAGAACTCAAGCAATCAAGGTAACTTTCTTCAGCTTTTGCAATTTCTCATTGATCACAATGATGAAGTGAGAGCAGTTGCATTGAAGAATGCTCCTGAAAATCTTAGACTGACATTATCTAGGATTCAAAATGACATTGTTAATGCTGCTGCTGTTGAAACTACAAATGTTATTATGAGAAACATGAGTGATGCCTTTTTTTCTATCCTAGTTGATGAATCTAGGGATGTACATGTGAAGGAGCAAATGGCTGTTACCTTTCGTTATGTGGATAAAAATGGGTGTGTGATTGAATCCTTCATAGGCATTGAACATGTAGCGAGTACTACTGCAATCTCACTTAAGAAAGCTATAGATGCACTATTCTCTAAACATGGATTAAGCTTCTCTAAGCTACGTGGTCAAGGTTACGATGGCGCCATTAATATGAGTGGAGAACTTAATGGTCTGAAGACCCTTATTTTGAAGGAGAACTCGAGTGTTTTTTATGTTCATTGTTTCGCACATCAGATTCAATTAGCTTTGGTCTATGTAGCCAAGAAACATGAAATTGTAGGTGCTTTCTTTGCATCAATTGGTAGTGTTGTAAACATTGTTGGGGCATCTTCTAAACATCGAGACATTTTTATAGAAAAGCAAGCTCTTAAAGTCATTGAGGCACTTAAAGTTGGAGAACTTACAAGTGGACACGGACTCAATCAAGAAACTGAAATTACGCGTTCATGTGATACGCGTTGGAGCTCACATTATGGTACTCTTCTAAACTTTACTGTCATGTTTTCTTCCATAATTGATGAGTTGGATGAAATAGCATTTGATAAAGTGAGTTCTGATCAGAAGCATGAAGCTTTTATTTCTTTGAATTTGCATTTGATGAGAATTATACTTGGAATCACTCATGAGTTATCACAAGCACTACAAAAAGATGATCATGACATAGTGAATGCTATGGATTTAGTGAAAGTGTGCAAGAGAAAATTGCAGACTTTTAGGGAGAGTGGATGGCTTTCTTTGTTTGAGCAGGTTGTTCTATTTTGTGGAAAAGAGAATATTAGTGTTTCAAACACGGATGATCAATATGTATGTCTAGGAAAATCAAGGCGTAGAGCTCCTGAAATGACAAGTATGCATTACTATCGCGAGCTAGATAACCGTTTCAGTGAGGCTACTACTGAACTTCTCCTTTGTTTGGCATCTCTAAGTCCTAATTATTCATTTGCAGCTTATAATAAGCAAAGTTTGATGCGTCTTGCTGAGCTTTATCCTCATGATTTTTCTGCATCAGAGTTGTTGTTGCTAGAATGTCAGATAGAGACTTATATTGATGATATACGATCTACCAACAAGTTCCAAGAATTGCAAGGGATTGATGATCTTGCAAAGAAATTAGTTGAGACAAGAAAGCATAAGACATATCCTTATGTTTATTTACTGATCACTTTGGCTCTAGTACTTCCTGTTGCAACAGCCTCTGTTGAAAGAGTTTTCTCTTCCATGAATATTATAAAGAATCGAATTCGCAATCGAATGGGAGATCAATGGATGAATGACTGCTTAATTGTATATCTTGAGAAGGATATATTCAATTCCATTGACAATGAGTCTATTATTCAGCGTTTTCAAAACATAGCACCTCGTAGAGGACAATTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

641

Amino Acids

73.16

Weight (kDa)

6.2

Isoelectric Point (pI)

47.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 61 - 240 1.4e-62 Domain of unknown function (DUF4371)
Dimer_Tnp_hAT PF05699 558 - 617 5.8e-06 hAT family C-terminal dimerisation region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19260 AT1G41920 AT1G42710 AT2G06541 AT2G06541 AT3G29450 AT3G29763 AT3G29765 AT3G31402 AT3G31402 AT4G09660
fragaria_vesca FvH4_1g22711 FvH4_3g10612 FvH4_3g23261 FvH4_3g31623 FvH4_3g33391 FvH4_3g37321 FvH4_3g43192 FvH4_3g43193 FvH4_4g00181 FvH4_4g00251 FvH4_4g08751 FvH4_4g15271 FvH4_5g27190 FvH4_6g02122 FvH4_6g26880 FvH4_6g35121 FvH4_7g16871 FvH4_7g19080 FvH4_7g30071
malus_domestica MD02G1162100.v1.1 MD03G1081700.v1.1 MD09G1280500.v1.1 MD12G1083800.v1.1 MD12G1128200.v1.1
prunus_persica Prupe.7G129800_v2.0.a1
pyrus_communis pycom01g08000 pycom02g13840 pycom02g18030 pycom04g01290 pycom04g12580 pycom05g02550 pycom05g06740 pycom05g26200 pycom07g09850 pycom08g10610 pycom10g11280 pycom11g12580 pycom11g22260 pycom12g18440 pycom13g20080 pycom15g25600 pycom16g23600 pycom17g10070
rosa_chinensis RchiOBHm_Chr1g0313551 RchiOBHm_Chr1g0364331 RchiOBHm_Chr1g0369741 RchiOBHm_Chr1g0380371 RchiOBHm_Chr2g0097391 RchiOBHm_Chr2g0113561 RchiOBHm_Chr2g0114151 RchiOBHm_Chr2g0119761 RchiOBHm_Chr2g0149851 RchiOBHm_Chr2g0151931 RchiOBHm_Chr2g0166411 RchiOBHm_Chr3g0453661 RchiOBHm_Chr3g0466101 RchiOBHm_Chr3g0477911 RchiOBHm_Chr3g0486441 RchiOBHm_Chr4g0390161 RchiOBHm_Chr4g0392191 RchiOBHm_Chr4g0414461 RchiOBHm_Chr4g0421421 RchiOBHm_Chr5g0023801 RchiOBHm_Chr5g0040121 RchiOBHm_Chr5g0045381 RchiOBHm_Chr5g0061511 RchiOBHm_Chr5g0062621 RchiOBHm_Chr5g0064161 RchiOBHm_Chr5g0068711 RchiOBHm_Chr6g0246041 RchiOBHm_Chr6g0252511 RchiOBHm_Chr6g0252521 RchiOBHm_Chr6g0263361 RchiOBHm_Chr6g0269451 RchiOBHm_Chr6g0275351 RchiOBHm_Chr6g0288481 RchiOBHm_Chr6g0310011 RchiOBHm_Chr6g0310021 RchiOBHm_Chr7g0223071 RchiOBHm_Chr7g0227621 RchiOBHm_Chr7g0242581
rosa_laevigata RLG00000033957
rosa_multiflora Rmu_co8455865.1_g000001 Rmu_sc0000021.1_g000011 Rmu_sc0000079.1_g000049 Rmu_sc0000087.1_g000015 Rmu_sc0000151.1_g000008 Rmu_sc0000365.1_g000014 Rmu_sc0000446.1_g000054 Rmu_sc0000446.1_g000055 Rmu_sc0000534.1_g000006 Rmu_sc0000724.1_g000020 Rmu_sc0000859.1_g000001 Rmu_sc0000876.1_g000002 Rmu_sc0000881.1_g000005 Rmu_sc0000929.1_g000014 Rmu_sc0001112.1_g000004 Rmu_sc0001136.1_g000009 Rmu_sc0001353.1_g000064 Rmu_sc0001662.1_g000005 Rmu_sc0001764.1_g000006 Rmu_sc0001982.1_g000015 Rmu_sc0002052.1_g000008 Rmu_sc0002052.1_g000009 Rmu_sc0002158.1_g000011 Rmu_sc0002285.1_g000005 Rmu_sc0002983.1_g000025 Rmu_sc0003063.1_g000006 Rmu_sc0003076.1_g000005 Rmu_sc0003221.1_g000053 Rmu_sc0003382.1_g000010 Rmu_sc0003733.1_g000054 Rmu_sc0003997.1_g000005 Rmu_sc0004283.1_g000008 Rmu_sc0004283.1_g000053 Rmu_sc0004509.1_g000007 Rmu_sc0004540.1_g000028 Rmu_sc0004657.1_g000005 Rmu_sc0004935.1_g000006 Rmu_sc0005072.1_g000003 Rmu_sc0005248.1_g000001 Rmu_sc0006161.1_g000001 Rmu_sc0006209.1_g000005 Rmu_sc0006576.1_g000018 Rmu_sc0006576.1_g000019 Rmu_sc0007121.1_g000016 Rmu_sc0007121.1_g000032 Rmu_sc0007753.1_g000016 Rmu_sc0007795.1_g000009 Rmu_sc0007841.1_g000019 Rmu_sc0008339.1_g000021 Rmu_sc0008339.1_g000022 Rmu_sc0008432.1_g000001 Rmu_sc0008633.1_g000009 Rmu_sc0009104.1_g000013 Rmu_sc0011469.1_g000001 Rmu_sc0012039.1_g000001 Rmu_sc0013947.1_g000007 Rmu_sc0015560.1_g000001 Rmu_sc0017369.1_g000001 Rmu_sc0021648.1_g000001 Rmu_sc0022867.1_g000003 Rmu_sc0027801.1_g000001 Rmu_sc0027801.1_g000002 Rmu_sc0029861.1_g000001 Rmu_sc0030314.1_g000001 Rmu_sc0040149.1_g000001 Rmu_ssc0000089.1_g000028 Rmu_ssc0000480.1_g000033
rosa_roxburghii Rroxscaffold_1G00002540 Rroxscaffold_1G00013960 Rroxscaffold_1G00041160 Rroxscaffold_1G00045580 Rroxscaffold_3G00247310 Rroxscaffold_3G00267070 Rroxscaffold_4G00313830 Rroxscaffold_5G00372270 Rroxscaffold_6G00404800 Rroxscaffold_6G00406090
rosa_rugosa Rorug03G0269800 Rorug04G0142900 Rorug04G0152600 Rorug05G0223300.1 Rorug05G0266400 Rorug06G0008900 Rorug07G0086000 Rorug07G0205800 Rorug07G0270900
rosa_wichuraiana Rw0G001600 Rw0G017220 Rw0G017620 Rw0G018380 Rw1G002320 Rw1G020940 Rw1G021200 Rw1G022610 Rw1G038680 Rw2G013320 Rw2G016850 Rw2G024020 Rw2G025210 Rw2G032270 Rw2G039490 Rw2G041630 Rw2G048450 Rw2G051510 Rw3G025320 Rw4G003260 Rw4G007300 Rw4G009290 Rw4G010910 Rw4G013260 Rw5G008190 Rw5G008290 Rw5G018740 Rw5G023640 Rw5G028800 Rw5G031830 Rw5G041280 Rw5G044050 Rw6G007060 Rw6G008230 Rw6G009960 Rw6G013460 Rw6G014610 Rw6G017780 Rw6G033200 Rw7G021340 Rw7G023750 Rw7G032290 Rw7G032450 Rw7G033880 Rw7G038580 Rw7G040180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1500, 1778
Acc36I ACCTGC 1 cut(s) 1285
AccB1I GGYRCC 1 cut(s) 689
AccII CGCG 3 cut(s) 991, 1006, 1413
AclWI GGATC 2 cut(s) 104, 165
AcsI RAATTY 3 cut(s) 129, 1135, 1788
AcuI CTGAAG 3 cut(s) 195, 287, 743
AcyI GRCGYC 1 cut(s) 690
AfaI GTAC 4 cut(s) 504, 598, 1027, 1725
AfiI CCNNNNNNNGG 3 cut(s) 153, 1462, 1913
AflII CTTAAG 1 cut(s) 614
AflIII ACRYGT 4 cut(s) 505, 586, 989, 1004
AhdI GACNNNNNGTC 1 cut(s) 1873
AjnI CCWGG 1 cut(s) 112
Alw21I GWGCWC 2 cut(s) 1016, 1384
Alw26I GTCTC 3 cut(s) 885, 1580, 1661
AlwI GGATC 2 cut(s) 104, 165
AlwNI CAGNNNCTG 1 cut(s) 1745
Ama87I CYCGRG 1 cut(s) 748
AoxI GGCC 1 cut(s) 244
ApeKI GCWGC 3 cut(s) 419, 422, 1493
ApoI RAATTY 3 cut(s) 129, 1135, 1788
ArsI GACNNNNNNTTYG 2 cut(s) 718, 750
AseI ATTAAT 1 cut(s) 696
AspLEI GCGC 1 cut(s) 692
AsuHPI GGTGA 1 cut(s) 33
AvaI CYCGRG 1 cut(s) 748
BanI GGYRCC 1 cut(s) 689
BanII GRGCYC 2 cut(s) 1016, 1384
BbsI GAAGAC 1 cut(s) 731
Bbv12I GWGCWC 2 cut(s) 1016, 1384
BbvI GCAGC 3 cut(s) 406, 409, 1505
BccI CCATC 3 cut(s) 112, 680, 1269
BcgI CGANNNNNNTGC 2 cut(s) 1391, 1425
BciT130I CCWGG 1 cut(s) 114
BclI TGATCA 5 cut(s) 325, 1105, 1201, 1345, 1707
BcoDI GTCTC 3 cut(s) 885, 1580, 1661
BfaI CTAG 8 cut(s) 203, 393, 482, 495, 1361, 1418, 1571, 1721
BfmI CTRYAG 1 cut(s) 624
BfoI RGCGCY 1 cut(s) 693
BfrI CTTAAG 1 cut(s) 614
BfuAI ACCTGC 1 cut(s) 1285
BisI GCNGC 3 cut(s) 420, 423, 1494
BlpI GCTNAGC 1 cut(s) 1527
BlsI GCNGC 3 cut(s) 421, 424, 1495
BmcAI AGTACT 2 cut(s) 598, 1725
Bme1390I CCNGG 1 cut(s) 114
BmeRI GACNNNNNGTC 1 cut(s) 1873
BmeT110I CYCGRG 1 cut(s) 748
BmiI GGNNCC 1 cut(s) 691
BmrFI CCNGG 1 cut(s) 114
BmsI GCATC 7 cut(s) 454, 619, 851, 884, 1475, 1506, 1562
BpiI GAAGAC 1 cut(s) 731
BpmI CTGGAG 1 cut(s) 135
Bpu1102I GCTNAGC 1 cut(s) 1527
BpuEI CTTGAG 2 cut(s) 265, 1862
BsaAI YACGTR 1 cut(s) 671
BsaBI GATNNNNATC 1 cut(s) 141
BsaHI GRCGYC 1 cut(s) 690
Bsc4I CCNNNNNNNGG 3 cut(s) 153, 1462, 1913
Bse8I GATNNNNATC 1 cut(s) 141
BseBI CCWGG 1 cut(s) 114
BseGI GGATG 6 cut(s) 142, 505, 1081, 1280, 1348, 1821
BseJI GATNNNNATC 1 cut(s) 141
BseLI CCNNNNNNNGG 3 cut(s) 153, 1462, 1913
BseMII CTCAG 1 cut(s) 1518
BseXI GCAGC 3 cut(s) 406, 409, 1505
Bsh1236I CGCG 3 cut(s) 991, 1006, 1413
BshFI GGCC 1 cut(s) 246
BshNI GGYRCC 1 cut(s) 689
BsiHKAI GWGCWC 2 cut(s) 1016, 1384
BsiHKCI CYCGRG 1 cut(s) 748
BslI CCNNNNNNNGG 3 cut(s) 153, 1462, 1913
BsmAI GTCTC 3 cut(s) 885, 1580, 1661
BsmI GAATGC 3 cut(s) 222, 367, 1222
BsnI GGCC 1 cut(s) 246
BsoBI CYCGRG 1 cut(s) 748
Bsp1286I GDGCHC 2 cut(s) 1016, 1384
Bsp1407I TGTACA 1 cut(s) 502
Bsp1720I GCTNAGC 1 cut(s) 1527
Bsp68I TCGCGA 1 cut(s) 1413
BspANI GGCC 1 cut(s) 246
BspCNI CTCAG 1 cut(s) 1519
BspFNI CGCG 3 cut(s) 991, 1006, 1413
BspHI TCATGA 4 cut(s) 262, 1171, 1204, 1540
BspLI GGNNCC 1 cut(s) 691
BspMI ACCTGC 1 cut(s) 1285
BspPI GGATC 2 cut(s) 104, 165
BspT107I GGYRCC 1 cut(s) 689
BspTI CTTAAG 1 cut(s) 614
BsrGI TGTACA 1 cut(s) 502
BssNI GRCGYC 1 cut(s) 690
Bst2UI CCWGG 1 cut(s) 114
Bst4CI ACNGT 2 cut(s) 1045, 1427
Bst6I CTCTTC 3 cut(s) 163, 1035, 1768
BstACI GRCGYC 1 cut(s) 690
BstAFI CTTAAG 1 cut(s) 614
BstAUI TGTACA 1 cut(s) 502
BstBAI YACGTR 1 cut(s) 671
BstC8I GCNNGC 2 cut(s) 912, 1415
BstDEI CTNAG 6 cut(s) 182, 236, 377, 663, 1472, 1527
BstENI CCTNNNNNAGG 1 cut(s) 1911
BstF5I GGATG 6 cut(s) 142, 505, 1081, 1280, 1348, 1821
BstFNI CGCG 3 cut(s) 991, 1006, 1413
BstH2I RGCGCY 1 cut(s) 693
BstHHI GCGC 1 cut(s) 692
BstMAI GTCTC 3 cut(s) 885, 1580, 1661
BstMWI GCNNNNNNNGC 2 cut(s) 629, 839
BstNI CCWGG 1 cut(s) 114
BstNSI RCATGY 2 cut(s) 509, 590
BstSCI CCNGG 1 cut(s) 112
BstSFI CTRYAG 1 cut(s) 624
BstUI CGCG 3 cut(s) 991, 1006, 1413
BstV1I GCAGC 3 cut(s) 406, 409, 1505
BstV2I GAAGAC 1 cut(s) 731
BsuRI GGCC 1 cut(s) 246
BtsCI GGATG 6 cut(s) 142, 505, 1081, 1280, 1348, 1821
BtsIMutI CAGTG 1 cut(s) 1438
BtuMI TCGCGA 1 cut(s) 1413
BveI ACCTGC 1 cut(s) 1285
Cac8I GCNNGC 2 cut(s) 912, 1415
CaiI CAGNNNCTG 1 cut(s) 1745
CciI TCATGA 4 cut(s) 262, 1171, 1204, 1540
CfoI GCGC 1 cut(s) 692
CseI GACGC 1 cut(s) 1508
Csp6I GTAC 4 cut(s) 503, 597, 1026, 1724
CviQI GTAC 4 cut(s) 503, 597, 1026, 1724
DdeI CTNAG 6 cut(s) 182, 236, 377, 663, 1472, 1527
DinI GGCGCC 1 cut(s) 691
DraI TTTAAA 1 cut(s) 16
DriI GACNNNNNGTC 1 cut(s) 1873
Eam1104I CTCTTC 3 cut(s) 163, 1035, 1768
Eam1105I GACNNNNNGTC 1 cut(s) 1873
EarI CTCTTC 3 cut(s) 163, 1035, 1768
Ecl136II GAGCTC 2 cut(s) 1014, 1382
Eco147I AGGCCT 1 cut(s) 246
Eco24I GRGCYC 2 cut(s) 1016, 1384
Eco53kI GAGCTC 2 cut(s) 1014, 1382
Eco57I CTGAAG 3 cut(s) 195, 287, 743
Eco88I CYCGRG 1 cut(s) 748
EcoICRI GAGCTC 2 cut(s) 1014, 1382
EcoNI CCTNNNNNAGG 1 cut(s) 1911
EcoRI GAATTC 1 cut(s) 1788
EcoRII CCWGG 1 cut(s) 112
EcoT22I ATGCAT 1 cut(s) 1404
EcoT38I GRGCYC 2 cut(s) 1016, 1384
EgeI GGCGCC 1 cut(s) 691
EheI GGCGCC 1 cut(s) 691
FbaI TGATCA 5 cut(s) 325, 1105, 1201, 1345, 1707
Fnu4HI GCNGC 3 cut(s) 420, 423, 1494
FokI GGATG 6 cut(s) 129, 512, 1088, 1287, 1355, 1828
FriOI GRGCYC 2 cut(s) 1016, 1384
Fsp4HI GCNGC 3 cut(s) 420, 423, 1494
FspBI CTAG 8 cut(s) 203, 393, 482, 495, 1361, 1418, 1571, 1721
GlaI GCGC 1 cut(s) 691
GluI GCNGC 3 cut(s) 420, 423, 1494
GsuI CTGGAG 1 cut(s) 135
HaeII RGCGCY 1 cut(s) 693
HaeIII GGCC 1 cut(s) 246
HgaI GACGC 1 cut(s) 1508
HhaI GCGC 1 cut(s) 692
Hin1I GRCGYC 1 cut(s) 690
Hin6I GCGC 1 cut(s) 690
HinP1I GCGC 1 cut(s) 690
HindIII AAGCTT 3 cut(s) 207, 655, 1119
HphI GGTGA 1 cut(s) 33
Hpy166II GTNNAC 2 cut(s) 862, 959
Hpy188I TCNGA 8 cut(s) 109, 274, 723, 783, 1105, 1110, 1558, 1581
Hpy8I GTNNAC 2 cut(s) 862, 959
HpyAV CCTTC 4 cut(s) 505, 580, 733, 1840
HpyCH4III ACNGT 2 cut(s) 1045, 1427
HpyCH4IV ACGT 1 cut(s) 670
HpyF10VI GCNNNNNNNGC 2 cut(s) 629, 839
HpyF3I CTNAG 6 cut(s) 182, 236, 377, 663, 1472, 1527
HpySE526I ACGT 1 cut(s) 670
Hsp92I GRCGYC 1 cut(s) 690
HspAI GCGC 1 cut(s) 690
KasI GGCGCC 1 cut(s) 689
Ksp22I TGATCA 5 cut(s) 325, 1105, 1201, 1345, 1707
LmnI GCTCC 4 cut(s) 370, 514, 1011, 1387
LpnPI CCDG 6 cut(s) 99, 126, 381, 1280, 1398, 1743
Lsp1109I GCAGC 3 cut(s) 406, 409, 1505
LweI GCATC 7 cut(s) 454, 619, 851, 884, 1475, 1506, 1562
MaeI CTAG 8 cut(s) 203, 393, 482, 495, 1361, 1418, 1571, 1721
MaeII ACGT 1 cut(s) 670
MaeIII GTNAC 3 cut(s) 293, 526, 680
MboII GAAGA 9 cut(s) 180, 224, 293, 370, 736, 870, 1022, 1047, 1755
MfeI CAATTG 1 cut(s) 846
MhlI GDGCHC 2 cut(s) 1016, 1384
MluI ACGCGT 2 cut(s) 989, 1004
Mly113I GGCGCC 1 cut(s) 690
MlyI GAGTC 5 cut(s) 18, 82, 278, 960, 1883
MmeI TCCRAC 3 cut(s) 922, 989, 1053
MnlI CCTC 8 cut(s) 56, 236, 922, 1429, 1548, 1753, 1907, 1917
Mph1103I ATGCAT 1 cut(s) 1404
MseI TTAA 9 cut(s) 15, 414, 615, 653, 696, 714, 918, 936, 1829
MslI CAYNNNNRTG 2 cut(s) 333, 698
MspCI CTTAAG 1 cut(s) 614
MspR9I CCNGG 1 cut(s) 114
MunI CAATTG 1 cut(s) 846
Mva1269I GAATGC 3 cut(s) 222, 367, 1222
MvaI CCWGG 1 cut(s) 114
MvnI CGCG 3 cut(s) 991, 1006, 1413
MwoI GCNNNNNNNGC 2 cut(s) 629, 839
NarI GGCGCC 1 cut(s) 690
NlaIV GGNNCC 1 cut(s) 691
NruI TCGCGA 1 cut(s) 1413
NsiI ATGCAT 1 cut(s) 1404
NspI RCATGY 2 cut(s) 509, 590
PaeR7I CTCGAG 1 cut(s) 748
PagI TCATGA 4 cut(s) 262, 1171, 1204, 1540
PceI AGGCCT 1 cut(s) 246
PciI ACATGT 2 cut(s) 505, 586
PctI GAATGC 3 cut(s) 222, 367, 1222
PfeI GAWTC 6 cut(s) 397, 491, 566, 784, 1164, 1783
PfoI TCCNGGA 1 cut(s) 112
PkrI GCNGC 3 cut(s) 421, 424, 1495
PleI GAGTC 5 cut(s) 17, 81, 277, 960, 1882
PluTI GGCGCC 1 cut(s) 693
PpsI GAGTC 5 cut(s) 17, 81, 277, 960, 1882
Ppu21I YACGTR 1 cut(s) 671
PscI ACATGT 2 cut(s) 505, 586
PshBI ATTAAT 1 cut(s) 696
PsiI TTATAA 2 cut(s) 1500, 1778
Psp124BI GAGCTC 2 cut(s) 1016, 1384
Psp6I CCWGG 1 cut(s) 112
PspGI CCWGG 1 cut(s) 112
PspN4I GGNNCC 1 cut(s) 691
PspXI VCTCGAGB 1 cut(s) 748
PstNI CAGNNNCTG 1 cut(s) 1745
RruI TCGCGA 1 cut(s) 1413
RsaI GTAC 4 cut(s) 504, 598, 1027, 1725
RsaNI GTAC 4 cut(s) 503, 597, 1026, 1724
RseI CAYNNNNRTG 2 cut(s) 333, 698
SacI GAGCTC 2 cut(s) 1016, 1384
SaqAI TTAA 9 cut(s) 15, 414, 615, 653, 696, 714, 918, 936, 1829
SatI GCNGC 3 cut(s) 420, 423, 1494
ScaI AGTACT 2 cut(s) 598, 1725
SchI GAGTC 5 cut(s) 18, 82, 278, 960, 1883
ScrFI CCNGG 1 cut(s) 114
SduI GDGCHC 2 cut(s) 1016, 1384
SfaNI GCATC 7 cut(s) 454, 619, 851, 884, 1475, 1506, 1562
SfcI CTRYAG 1 cut(s) 624
SfoI GGCGCC 1 cut(s) 691
Sfr274I CTCGAG 1 cut(s) 748
SlaI CTCGAG 1 cut(s) 748
SmiMI CAYNNNNRTG 2 cut(s) 333, 698
SmlI CTYRAG 4 cut(s) 280, 614, 748, 1841
SmoI CTYRAG 4 cut(s) 280, 614, 748, 1841
SseBI AGGCCT 1 cut(s) 246
SspDI GGCGCC 1 cut(s) 689
SspI AATATT 3 cut(s) 100, 1324, 1774
SspMI CTAG 8 cut(s) 203, 393, 482, 495, 1361, 1418, 1571, 1721
SstI GAGCTC 2 cut(s) 1016, 1384
StuI AGGCCT 1 cut(s) 246
StyD4I CCNGG 1 cut(s) 112
TaaI ACNGT 2 cut(s) 1045, 1427
TaiI ACGT 1 cut(s) 673
TaqI TCGA 5 cut(s) 193, 749, 889, 1786, 1798
TatI WGTACW 3 cut(s) 502, 596, 1723
TfiI GAWTC 6 cut(s) 397, 491, 566, 784, 1164, 1783
Tru1I TTAA 9 cut(s) 15, 414, 615, 653, 696, 714, 918, 936, 1829
Tru9I TTAA 9 cut(s) 15, 414, 615, 653, 696, 714, 918, 936, 1829
TscAI CASTG 1 cut(s) 1438
TseI GCWGC 3 cut(s) 419, 422, 1493
TspGWI ACGGA 2 cut(s) 978, 1355
TspRI CASTG 1 cut(s) 1438
Vha464I CTTAAG 1 cut(s) 614
VspI ATTAAT 1 cut(s) 696
XagI CCTNNNNNAGG 1 cut(s) 1911
XapI RAATTY 3 cut(s) 129, 1135, 1788
XceI RCATGY 2 cut(s) 509, 590
XhoI CTCGAG 1 cut(s) 748
XspI CTAG 8 cut(s) 203, 393, 482, 495, 1361, 1418, 1571, 1721
ZrmI AGTACT 2 cut(s) 598, 1725
Zsp2I ATGCAT 1 cut(s) 1404
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.