MD03G1081700.v1.1

Zinc finger MYM-type protein 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0000122
Physical Location & Seq
Forward (+)
6576673 .. 6579348
2676 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1081700.v1.1.491

Sequence Viewer

Length: 1740 bp
ATGAGGTTTCTTTTGCATCAAGGGCTTATATATTGCGGAGATGATGAGGAATATGAAGGTTCAAACAACGAAGGTGTTTTTCTTGGACTCTGGAACTTCCAATGTGGTCGTCATGAGGAGTTAAAAGCTATCACATTGAGAAATCCCCCCTTAAGTCTGAAGTTGACTTCACCTGATACTCAGAAGGACATTATAACTGCTTTTTCAATGGAAATCATCAACGCAATAGCTAAAGATATTGGTGATTCGTATTTTTCCATTCTTATCGATGAACTTCATGAAAAGTCTCCAATGAATCAATTGGCTATTGTTATACGCTTTGTGGATAAAGGTCATGTGATTGAGCGTTTTTTAGGCATTGTACAAGCCACTAATAATACTGCTGTCTCACGTAAGGTGGCTATTGATGATTTATTTTCTACTCATGGATTAAGCATGTCAAAGCTACGGGGGCAAGGTTATGGTGGGACAAGTAATATGCTAGGTGAGTTGAATAGTCTTAAGACACTTATAATGAAGGAGAACGAGTATGCCTATTATGTTCATTGCTTTGCTCACGATCTTCATTCAACACTTATTGGTGTGGCAAAGGATCATTTTGAAATCTTTGGTCTCTTTACCTCGGTTGCCAATCTGGTGAATATTGTTGGGGCATTTGTTGAATGTCGTGATACTCTTCAGAAGAAACATGGTGCTTTGGTATCTGAAGCACTCAATACCAGTGATCTTCTAAGTGGACAAGGTCTGAATGAAGGCAGCTCAAAGTTTAAGAATTTAACAAGCGTGCTTACCATGTTCTCATCTGTGATAGATGTACTTGAGGTCATAGCAGATTTTGGATCAAAGACTGAGCAGAAATGTAAAGCAGAGGTTCTATTGGGTTCCCTCTGGTCCTTCGATTGTATTTTTAGTTTACATATGATGATAAATGTTTTGGGAATCACAGATGCTTTGTCACAGGCATTACAAAAAAAAGACCAGGATATCGTGAACGCCATTAACTTAGTCAGAAGATGTAAAGAAGAGCTGAAAATGATGAAGGAGAGTGGTTGGGATTCTTTACTCAATCAGGTTTTTTCTTTCTGTGACAAACATCAGATTAAAGTTCCTAACATGAATGACATGTTTCAAACTATAGGGATAAAAAAACCTCCGGTGGTAACAAACATGCATCATTATCGTGTTGATGTGTATTGTAATGTTATTGACATGCAACTTCAAGAGCTAAATATTCGTTTCGCTGAGTTGAATACTGAGTTGCTTCTTTGTGTGGCATGTTTGAATCCAAGCGATTCATTCTCTGCTTTTGACAAGAAAAAGTTGACTCGGCTTGCTCAGTATTACCCAAATGACTTTTCTGCACTTGACTTGATGATACTTGAAGATCAGCTTAAGATGTACATTATGGACTTGCGCTCCAGCATTGAGTTTTCAGGATTGAATGGGATTGCAGATCTTGCACAGAAAATGGTTGAGACAGAAAAAGACAGTGTTTACCCATTAGTTTACTTGCTGTTGACATTGGCACTTATCTTACCAGTTGCAACTCCTACTGTAGAGAGGGCGTTTTGTGCTACGAGGATTGTGAAGAACCGGTTACTCAATCAAATGGAAGATCAAAGGACGGATGATAGTTGGATTGCATATATTGAGAAAGACATTCTTGATAGTGTCGAACATGAGATCGTTATGCAACGATTTCAAAATATGAAAACTTGTCCATGGAAAATCTCATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

580

Amino Acids

65.48

Weight (kDa)

5.4

Isoelectric Point (pI)

31.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 2 - 165 5.5e-41 Domain of unknown function (DUF4371)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19260 AT1G41920 AT1G42710 AT2G06541 AT2G06541 AT3G29450 AT3G29763 AT3G29765 AT3G31402 AT3G31402 AT4G09660
fragaria_vesca FvH4_1g22711 FvH4_3g10612 FvH4_3g23261 FvH4_3g31623 FvH4_3g33391 FvH4_3g37321 FvH4_3g43192 FvH4_3g43193 FvH4_4g00181 FvH4_4g00251 FvH4_4g08751 FvH4_4g15271 FvH4_5g27190 FvH4_6g02122 FvH4_6g26880 FvH4_6g35121 FvH4_7g16871 FvH4_7g19080 FvH4_7g30071
malus_domestica MD02G1162100.v1.1 MD03G1081700.v1.1 MD09G1280500.v1.1 MD12G1083800.v1.1 MD12G1128200.v1.1
prunus_persica Prupe.7G129800_v2.0.a1
pyrus_communis pycom01g08000 pycom02g13840 pycom02g18030 pycom04g01290 pycom04g12580 pycom05g02550 pycom05g06740 pycom05g26200 pycom07g09850 pycom08g10610 pycom10g11280 pycom11g12580 pycom11g22260 pycom12g18440 pycom13g20080 pycom15g25600 pycom16g23600 pycom17g10070
rosa_chinensis RchiOBHm_Chr1g0313551 RchiOBHm_Chr1g0364331 RchiOBHm_Chr1g0369741 RchiOBHm_Chr1g0380371 RchiOBHm_Chr2g0097391 RchiOBHm_Chr2g0113561 RchiOBHm_Chr2g0114151 RchiOBHm_Chr2g0119761 RchiOBHm_Chr2g0149851 RchiOBHm_Chr2g0151931 RchiOBHm_Chr2g0166411 RchiOBHm_Chr3g0453661 RchiOBHm_Chr3g0466101 RchiOBHm_Chr3g0477911 RchiOBHm_Chr3g0486441 RchiOBHm_Chr4g0390161 RchiOBHm_Chr4g0392191 RchiOBHm_Chr4g0414461 RchiOBHm_Chr4g0421421 RchiOBHm_Chr5g0023801 RchiOBHm_Chr5g0040121 RchiOBHm_Chr5g0045381 RchiOBHm_Chr5g0061511 RchiOBHm_Chr5g0062621 RchiOBHm_Chr5g0064161 RchiOBHm_Chr5g0068711 RchiOBHm_Chr6g0246041 RchiOBHm_Chr6g0252511 RchiOBHm_Chr6g0252521 RchiOBHm_Chr6g0263361 RchiOBHm_Chr6g0269451 RchiOBHm_Chr6g0275351 RchiOBHm_Chr6g0288481 RchiOBHm_Chr6g0310011 RchiOBHm_Chr6g0310021 RchiOBHm_Chr7g0223071 RchiOBHm_Chr7g0227621 RchiOBHm_Chr7g0242581
rosa_laevigata RLG00000033957
rosa_multiflora Rmu_co8455865.1_g000001 Rmu_sc0000021.1_g000011 Rmu_sc0000079.1_g000049 Rmu_sc0000087.1_g000015 Rmu_sc0000151.1_g000008 Rmu_sc0000365.1_g000014 Rmu_sc0000446.1_g000054 Rmu_sc0000446.1_g000055 Rmu_sc0000534.1_g000006 Rmu_sc0000724.1_g000020 Rmu_sc0000859.1_g000001 Rmu_sc0000876.1_g000002 Rmu_sc0000881.1_g000005 Rmu_sc0000929.1_g000014 Rmu_sc0001112.1_g000004 Rmu_sc0001136.1_g000009 Rmu_sc0001353.1_g000064 Rmu_sc0001662.1_g000005 Rmu_sc0001764.1_g000006 Rmu_sc0001982.1_g000015 Rmu_sc0002052.1_g000008 Rmu_sc0002052.1_g000009 Rmu_sc0002158.1_g000011 Rmu_sc0002285.1_g000005 Rmu_sc0002983.1_g000025 Rmu_sc0003063.1_g000006 Rmu_sc0003076.1_g000005 Rmu_sc0003221.1_g000053 Rmu_sc0003382.1_g000010 Rmu_sc0003733.1_g000054 Rmu_sc0003997.1_g000005 Rmu_sc0004283.1_g000008 Rmu_sc0004283.1_g000053 Rmu_sc0004509.1_g000007 Rmu_sc0004540.1_g000028 Rmu_sc0004657.1_g000005 Rmu_sc0004935.1_g000006 Rmu_sc0005072.1_g000003 Rmu_sc0005248.1_g000001 Rmu_sc0006161.1_g000001 Rmu_sc0006209.1_g000005 Rmu_sc0006576.1_g000018 Rmu_sc0006576.1_g000019 Rmu_sc0007121.1_g000016 Rmu_sc0007121.1_g000032 Rmu_sc0007753.1_g000016 Rmu_sc0007795.1_g000009 Rmu_sc0007841.1_g000019 Rmu_sc0008339.1_g000021 Rmu_sc0008339.1_g000022 Rmu_sc0008432.1_g000001 Rmu_sc0008633.1_g000009 Rmu_sc0009104.1_g000013 Rmu_sc0011469.1_g000001 Rmu_sc0012039.1_g000001 Rmu_sc0013947.1_g000007 Rmu_sc0015560.1_g000001 Rmu_sc0017369.1_g000001 Rmu_sc0021648.1_g000001 Rmu_sc0022867.1_g000003 Rmu_sc0027801.1_g000001 Rmu_sc0027801.1_g000002 Rmu_sc0029861.1_g000001 Rmu_sc0030314.1_g000001 Rmu_sc0040149.1_g000001 Rmu_ssc0000089.1_g000028 Rmu_ssc0000480.1_g000033
rosa_roxburghii Rroxscaffold_1G00002540 Rroxscaffold_1G00013960 Rroxscaffold_1G00041160 Rroxscaffold_1G00045580 Rroxscaffold_3G00247310 Rroxscaffold_3G00267070 Rroxscaffold_4G00313830 Rroxscaffold_5G00372270 Rroxscaffold_6G00404800 Rroxscaffold_6G00406090
rosa_rugosa Rorug03G0269800 Rorug04G0142900 Rorug04G0152600 Rorug05G0223300.1 Rorug05G0266400 Rorug06G0008900 Rorug07G0086000 Rorug07G0205800 Rorug07G0270900
rosa_wichuraiana Rw0G001600 Rw0G017220 Rw0G017620 Rw0G018380 Rw1G002320 Rw1G020940 Rw1G021200 Rw1G022610 Rw1G038680 Rw2G013320 Rw2G016850 Rw2G024020 Rw2G025210 Rw2G032270 Rw2G039490 Rw2G041630 Rw2G048450 Rw2G051510 Rw3G025320 Rw4G003260 Rw4G007300 Rw4G009290 Rw4G010910 Rw4G013260 Rw5G008190 Rw5G008290 Rw5G018740 Rw5G023640 Rw5G028800 Rw5G031830 Rw5G041280 Rw5G044050 Rw6G007060 Rw6G008230 Rw6G009960 Rw6G013460 Rw6G014610 Rw6G017780 Rw6G033200 Rw7G021340 Rw7G023750 Rw7G032290 Rw7G032450 Rw7G033880 Rw7G038580 Rw7G040180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 194, 512
AciI CCGC 1 cut(s) 36
AclWI GGATC 2 cut(s) 600, 847
AcsI RAATTY 1 cut(s) 772
AcuI CTGAAG 3 cut(s) 179, 662, 726
AfaI GTAC 3 cut(s) 363, 816, 1400
AflII CTTAAG 3 cut(s) 151, 500, 1391
AflIII ACRYGT 1 cut(s) 1122
AgeI ACCGGT 1 cut(s) 1593
AjnI CCWGG 1 cut(s) 978
AjuI GAANNNNNNNTTGG 2 cut(s) 1339, 1371
AluBI AGCT 7 cut(s) 128, 230, 445, 759, 1027, 1225, 1390
AluI AGCT 7 cut(s) 128, 230, 445, 759, 1027, 1225, 1390
Alw26I GTCTC 4 cut(s) 291, 391, 617, 1469
AlwI GGATC 2 cut(s) 600, 847
ApeKI GCWGC 1 cut(s) 756
ApoI RAATTY 1 cut(s) 772
AsiGI ACCGGT 1 cut(s) 1593
AspLEI GCGC 1 cut(s) 1416
AspS9I GGNCC 1 cut(s) 891
AsuHPI GGTGA 4 cut(s) 162, 254, 497, 649
AvaII GGWCC 1 cut(s) 891
BbvI GCAGC 1 cut(s) 768
BcgI CGANNNNNNTGC 2 cut(s) 1160, 1194
BciT130I CCWGG 1 cut(s) 980
BcoDI GTCTC 4 cut(s) 291, 391, 617, 1469
BfaI CTAG 1 cut(s) 482
BfmI CTRYAG 2 cut(s) 1134, 1554
BfrI CTTAAG 3 cut(s) 151, 500, 1391
BglII AGATCT 1 cut(s) 1453
BisI GCNGC 1 cut(s) 757
BlsI GCNGC 1 cut(s) 758
Bme1390I CCNGG 1 cut(s) 980
Bme18I GGWCC 1 cut(s) 891
BmgT120I GGNCC 1 cut(s) 891
BmiI GGNNCC 1 cut(s) 883
BmrFI CCNGG 1 cut(s) 980
BmsI GCATC 3 cut(s) 25, 937, 1180
BpmI CTGGAG 1 cut(s) 1402
BpuEI CTTGAG 1 cut(s) 839
Bsa29I ATCGAT 1 cut(s) 267
BsaAI YACGTR 1 cut(s) 392
BsaI GGTCTC 1 cut(s) 617
BsaJI CCNNGG 2 cut(s) 621, 1721
BsaWI WCCGGW 2 cut(s) 1153, 1593
BsaXI ACNNNNNCTCC 4 cut(s) 512, 542, 1400, 1430
Bse118I RCCGGY 1 cut(s) 1593
Bse1I ACTGG 2 cut(s) 720, 1538
Bse3DI GCAATG 1 cut(s) 544
BseBI CCWGG 1 cut(s) 980
BseCI ATCGAT 1 cut(s) 267
BseDI CCNNGG 2 cut(s) 621, 1721
BseGI GGATG 1 cut(s) 1633
BseMI GCAATG 1 cut(s) 544
BseMII CTCAG 5 cut(s) 194, 840, 1233, 1245, 1349
BseNI ACTGG 2 cut(s) 720, 1538
BseRI GAGGAG 1 cut(s) 131
BseXI GCAGC 1 cut(s) 768
BsgI GTGCAG 1 cut(s) 1344
BshTI ACCGGT 1 cut(s) 1593
BshVI ATCGAT 1 cut(s) 267
BsiSI CCGG 2 cut(s) 1154, 1594
BslFI GGGAC 1 cut(s) 481
BsmAI GTCTC 4 cut(s) 291, 391, 617, 1469
BsmFI GGGAC 1 cut(s) 481
Bso31I GGTCTC 1 cut(s) 617
Bsp1407I TGTACA 2 cut(s) 361, 1398
Bsp143I GATC 8 cut(s) 559, 592, 724, 839, 1384, 1453, 1615, 1683
Bsp19I CCATGG 1 cut(s) 1721
BspACI CCGC 1 cut(s) 36
BspCNI CTCAG 5 cut(s) 193, 841, 1234, 1246, 1348
BspDI ATCGAT 1 cut(s) 267
BspHI TCATGA 2 cut(s) 112, 277
BspLI GGNNCC 1 cut(s) 883
BspPI GGATC 2 cut(s) 600, 847
BspQI GCTCTTC 1 cut(s) 1017
BspTI CTTAAG 3 cut(s) 151, 500, 1391
BspTNI GGTCTC 1 cut(s) 617
BsrDI GCAATG 1 cut(s) 544
BsrFI RCCGGY 1 cut(s) 1593
BsrGI TGTACA 2 cut(s) 361, 1398
BsrI ACTGG 2 cut(s) 720, 1538
BssAI RCCGGY 1 cut(s) 1593
BssECI CCNNGG 2 cut(s) 621, 1721
BssMI GATC 8 cut(s) 559, 592, 724, 839, 1384, 1453, 1615, 1683
BssT1I CCWWGG 1 cut(s) 1721
Bst2UI CCWGG 1 cut(s) 980
Bst4CI ACNGT 2 cut(s) 1490, 1555
Bst6I CTCTTC 2 cut(s) 681, 1017
BstAFI CTTAAG 3 cut(s) 151, 500, 1391
BstAPI GCANNNNNTGC 1 cut(s) 1457
BstAUI TGTACA 2 cut(s) 361, 1398
BstBAI YACGTR 1 cut(s) 392
BstC8I GCNNGC 2 cut(s) 785, 1332
BstDEI CTNAG 7 cut(s) 180, 731, 849, 1003, 1242, 1254, 1335
BstDSI CCRYGG 1 cut(s) 1721
BstF5I GGATG 1 cut(s) 1633
BstHHI GCGC 1 cut(s) 1416
BstKTI GATC 8 cut(s) 562, 595, 727, 842, 1387, 1456, 1618, 1686
BstMAI GTCTC 4 cut(s) 291, 391, 617, 1469
BstMBI GATC 8 cut(s) 559, 592, 724, 839, 1384, 1453, 1615, 1683
BstMWI GCNNNNNNNGC 4 cut(s) 22, 451, 1457, 1571
BstNI CCWGG 1 cut(s) 980
BstNSI RCATGY 5 cut(s) 439, 1126, 1171, 1213, 1278
BstSCI CCNGG 1 cut(s) 978
BstSFI CTRYAG 2 cut(s) 1134, 1554
BstV1I GCAGC 1 cut(s) 768
BstX2I RGATCY 1 cut(s) 1453
BstYI RGATCY 1 cut(s) 1453
Bsu15I ATCGAT 1 cut(s) 267
BsuTUI ATCGAT 1 cut(s) 267
BtgI CCRYGG 1 cut(s) 1721
BtsCI GGATG 1 cut(s) 1633
BtsIMutI CAGTG 2 cut(s) 727, 1495
Cac8I GCNNGC 2 cut(s) 785, 1332
CciI TCATGA 2 cut(s) 112, 277
CfoI GCGC 1 cut(s) 1416
Cfr10I RCCGGY 1 cut(s) 1593
Cfr13I GGNCC 1 cut(s) 891
ClaI ATCGAT 1 cut(s) 267
Csp6I GTAC 3 cut(s) 362, 815, 1399
CspAI ACCGGT 1 cut(s) 1593
CviQI GTAC 3 cut(s) 362, 815, 1399
DdeI CTNAG 7 cut(s) 180, 731, 849, 1003, 1242, 1254, 1335
DpnI GATC 8 cut(s) 561, 594, 726, 841, 1386, 1455, 1617, 1685
DpnII GATC 8 cut(s) 559, 592, 724, 839, 1384, 1453, 1615, 1683
Eam1104I CTCTTC 2 cut(s) 681, 1017
EarI CTCTTC 2 cut(s) 681, 1017
Eco130I CCWWGG 1 cut(s) 1721
Eco31I GGTCTC 1 cut(s) 617
Eco32I GATATC 1 cut(s) 985
Eco47I GGWCC 1 cut(s) 891
Eco57I CTGAAG 3 cut(s) 179, 662, 726
EcoRII CCWGG 1 cut(s) 978
EcoRV GATATC 1 cut(s) 985
EcoT14I CCWWGG 1 cut(s) 1721
EcoT22I ATGCAT 1 cut(s) 1173
ErhI CCWWGG 1 cut(s) 1721
FalI AAGNNNNNCTT 4 cut(s) 1374, 1406, 1647, 1679
FaqI GGGAC 1 cut(s) 481
FauNDI CATATG 1 cut(s) 918
Fnu4HI GCNGC 1 cut(s) 757
FokI GGATG 1 cut(s) 1640
Fsp4HI GCNGC 1 cut(s) 757
FspBI CTAG 1 cut(s) 482
GlaI GCGC 1 cut(s) 1415
GluI GCNGC 1 cut(s) 757
GsuI CTGGAG 1 cut(s) 1402
HapII CCGG 2 cut(s) 1154, 1594
HhaI GCGC 1 cut(s) 1416
Hin6I GCGC 1 cut(s) 1414
HinP1I GCGC 1 cut(s) 1414
HincII GTYRAC 3 cut(s) 165, 1323, 1518
HindII GTYRAC 3 cut(s) 165, 1323, 1518
HinfI GANTC 8 cut(s) 87, 245, 295, 939, 1055, 1282, 1292, 1324
HpaII CCGG 2 cut(s) 1154, 1594
HphI GGTGA 4 cut(s) 162, 254, 497, 649
Hpy166II GTNNAC 8 cut(s) 165, 737, 914, 991, 1323, 1495, 1507, 1518
Hpy188I TCNGA 7 cut(s) 159, 183, 681, 706, 747, 1010, 1098
Hpy188III TCNNGA 9 cut(s) 91, 113, 278, 557, 668, 988, 1220, 1434, 1664
Hpy8I GTNNAC 8 cut(s) 165, 737, 914, 991, 1323, 1495, 1507, 1518
HpyAV CCTTC 7 cut(s) 50, 65, 178, 511, 746, 904, 1033
HpyCH4III ACNGT 2 cut(s) 1490, 1555
HpyCH4IV ACGT 1 cut(s) 391
HpyCH4V TGCA 9 cut(s) 16, 1171, 1213, 1361, 1451, 1460, 1544, 1643, 1693
HpyF10VI GCNNNNNNNGC 4 cut(s) 22, 451, 1457, 1571
HpyF3I CTNAG 7 cut(s) 180, 731, 849, 1003, 1242, 1254, 1335
HpySE526I ACGT 1 cut(s) 391
HspAI GCGC 1 cut(s) 1414
Kzo9I GATC 8 cut(s) 559, 592, 724, 839, 1384, 1453, 1615, 1683
LguI GCTCTTC 1 cut(s) 1017
LmnI GCTCC 1 cut(s) 1421
Lsp1109I GCAGC 1 cut(s) 768
LweI GCATC 3 cut(s) 25, 937, 1180
MaeI CTAG 1 cut(s) 482
MaeII ACGT 1 cut(s) 391
MaeIII GTNAC 4 cut(s) 954, 1085, 1159, 1596
MalI GATC 8 cut(s) 561, 594, 726, 841, 1386, 1455, 1617, 1685
MboI GATC 8 cut(s) 559, 592, 724, 839, 1384, 1453, 1615, 1683
MboII GAAGA 9 cut(s) 554, 668, 694, 719, 1023, 1034, 1394, 1600, 1625
MfeI CAATTG 1 cut(s) 299
MflI RGATCY 1 cut(s) 1453
MluCI AATT 2 cut(s) 299, 772
MlyI GAGTC 2 cut(s) 81, 1318
MmeI TCCRAC 1 cut(s) 1616
MnlI CCTC 9 cut(s) 40, 109, 631, 814, 862, 896, 1161, 1554, 1572
Mph1103I ATGCAT 1 cut(s) 1173
MseI TTAA 9 cut(s) 122, 152, 431, 501, 768, 776, 999, 1101, 1392
MslI CAYNNNNRTG 1 cut(s) 1179
MspCI CTTAAG 3 cut(s) 151, 500, 1391
MspI CCGG 2 cut(s) 1154, 1594
MspR9I CCNGG 1 cut(s) 980
MunI CAATTG 1 cut(s) 299
MvaI CCWGG 1 cut(s) 980
MwoI GCNNNNNNNGC 4 cut(s) 22, 451, 1457, 1571
NcoI CCATGG 1 cut(s) 1721
NdeI CATATG 1 cut(s) 918
NdeII GATC 8 cut(s) 559, 592, 724, 839, 1384, 1453, 1615, 1683
NlaIV GGNNCC 1 cut(s) 883
NmeAIII GCCGAG 1 cut(s) 1306
NmuCI GTSAC 2 cut(s) 954, 1085
NsiI ATGCAT 1 cut(s) 1173
NspI RCATGY 5 cut(s) 439, 1126, 1171, 1213, 1278
PagI TCATGA 2 cut(s) 112, 277
PciI ACATGT 1 cut(s) 1122
PciSI GCTCTTC 1 cut(s) 1017
PfeI GAWTC 6 cut(s) 245, 295, 939, 1055, 1282, 1292
PflFI GACNNNGTC 1 cut(s) 741
PinAI ACCGGT 1 cut(s) 1593
PkrI GCNGC 1 cut(s) 758
PleI GAGTC 2 cut(s) 81, 1318
PpsI GAGTC 2 cut(s) 81, 1318
Ppu21I YACGTR 1 cut(s) 392
PscI ACATGT 1 cut(s) 1122
PsiI TTATAA 2 cut(s) 194, 512
Psp6I CCWGG 1 cut(s) 978
PspGI CCWGG 1 cut(s) 978
PspN4I GGNNCC 1 cut(s) 883
PspPI GGNCC 1 cut(s) 891
PsuI RGATCY 1 cut(s) 1453
PsyI GACNNNGTC 1 cut(s) 741
RsaI GTAC 3 cut(s) 363, 816, 1400
RsaNI GTAC 3 cut(s) 362, 815, 1399
RseI CAYNNNNRTG 1 cut(s) 1179
SapI GCTCTTC 1 cut(s) 1017
SaqAI TTAA 9 cut(s) 122, 152, 431, 501, 768, 776, 999, 1101, 1392
SatI GCNGC 1 cut(s) 757
Sau3AI GATC 8 cut(s) 559, 592, 724, 839, 1384, 1453, 1615, 1683
Sau96I GGNCC 1 cut(s) 891
SchI GAGTC 2 cut(s) 81, 1318
ScrFI CCNGG 1 cut(s) 980
SfaNI GCATC 3 cut(s) 25, 937, 1180
SfcI CTRYAG 2 cut(s) 1134, 1554
SinI GGWCC 1 cut(s) 891
SmiMI CAYNNNNRTG 1 cut(s) 1179
SmlI CTYRAG 4 cut(s) 151, 500, 818, 1391
SmoI CTYRAG 4 cut(s) 151, 500, 818, 1391
Sse9I AATT 2 cut(s) 299, 772
SsiI CCGC 1 cut(s) 36
SspI AATATT 2 cut(s) 643, 1231
SspMI CTAG 1 cut(s) 482
StyD4I CCNGG 1 cut(s) 978
StyI CCWWGG 1 cut(s) 1721
TaaI ACNGT 2 cut(s) 1490, 1555
TaiI ACGT 1 cut(s) 394
TaqI TCGA 3 cut(s) 267, 897, 1674
TasI AATT 2 cut(s) 299, 772
TatI WGTACW 3 cut(s) 361, 814, 1398
TfiI GAWTC 6 cut(s) 245, 295, 939, 1055, 1282, 1292
Tru1I TTAA 9 cut(s) 122, 152, 431, 501, 768, 776, 999, 1101, 1392
Tru9I TTAA 9 cut(s) 122, 152, 431, 501, 768, 776, 999, 1101, 1392
TscAI CASTG 2 cut(s) 727, 1495
TseFI GTSAC 2 cut(s) 954, 1085
TseI GCWGC 1 cut(s) 756
Tsp45I GTSAC 2 cut(s) 954, 1085
TspGWI ACGGA 1 cut(s) 1640
TspRI CASTG 2 cut(s) 727, 1495
Tth111I GACNNNGTC 1 cut(s) 741
Vha464I CTTAAG 3 cut(s) 151, 500, 1391
VpaK11BI GGWCC 1 cut(s) 891
XapI RAATTY 1 cut(s) 772
XceI RCATGY 5 cut(s) 439, 1126, 1171, 1213, 1278
XspI CTAG 1 cut(s) 482
Zsp2I ATGCAT 1 cut(s) 1173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.