Rorug03G0269800

Zinc finger MYM-type protein 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000122
Physical Location & Seq
Forward (+)
26562676 .. 26567478
4803 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0269800.1

Sequence Viewer

Length: 1407 bp
ATGGCTTCCAACCACCAAAACAATGCCCCTAATGAAGTGGTGGTTGTCATGGTTCCTTTACCGGCACAAGGCCACCTCAACCAGCTCCTCCACCTGTCCCGCCTCATCTCCGCCTACAACATCCCCGTTCACTTTGTCGGAACCCCCAATCACAACCGTCAAGCCAAGCTTCGAGTCCAAGGCTGGGATCAAACCTCAGACGGCTCAAACTATATCCAATTCCATGACTTCACCATCCCTCCTTTTCCTTGCCCCCCTCCCAACCCTAGTGCACCAACTAAGTTCCCTTCTCATCTCCAACCCACATTTCAAGCCACCACCCATCTCCGCCACCCAGTCGCCACACTTGTACGCAAACTAGCCTCTCAGTCAAGGCGAGTAGTCGTCATCCACGACTCCCTCATGGCTTCCGTCATCCAAGACGTGGGTTCCATCGTAAACACCGAGTCCTATACCTTCCACACTGTTTCCGCCTTCGCCATTTTCCTGTTATTATGGGAATCAATTGGAAAGCCTTCTAAGCTAGAAGGGGTGGAGGTCCAAATCCCTGACACCGTCCCCCGTCTCGAGGATTGTTTCCCCGACGAGTTCTTTGATTTCGTTGTTGCTCAATATGAATACAAAAAGTACAGCTCAGGGAGCATCTTTAACACCAGCAAAACCATAGAAGGTCAGTACATAGATTTACTAAGCAAATTAGGTGATAATAAGAAGCATTGGGCTATTGGGCCGTTCAACCCGGTGTCCATATCCCTGAAAACTCCAAAGCACATGTGCTTGGATTGGCTTGATAAACAAGATGCCAACTCAGTAATATATGTGTCTTTTGGAACAACCACCACCATGACAGATGAACAGATCATGGAGTTGGCTATTGGGTTGGAAGAAAGCAAACAAAAATTCATTTGGGTATTAAGAGATGCTGACAAGGGTGACCTTTTCCTCAACGGAGACCAAGTTAGAAAGCCTAAGCTTCCAGAAGGGTATGAACAGAGAGTGAAAGATAGGGGAGTAGTAGTTAGAGATTGGGCGCCCCAGTTGGAGATTCTGTCGCACAAATCAATTGCTTGGTTCGTAAGTCATTGTGGATGGAACTCATGCATGGAAAGTGTCACCATGGGAGTTCCCATAGCATGTTGGCCGATGCACTCGGACCAACCAAGAAACACGGTTCTGGTTACTAGGGTGCTCAAAGTTGGTCTGGTTATGAGAGATTGGGAGAGAAGGGGTGAGCTTGTGACATCTTCAATGGTGAAAGATGGTGTGCAGAAATTGATGGGATCTGGAGAAGCGGATGTGATAAGGAAGAGGGCAGGAGAGTTGGGTGTTGCTGTGAGAGGGTCGATGGCGAAAGGCGGAACTTCTCGGGTGGAGTTGTCTTCATTTGTTGCTCATATTACTAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

468

Amino Acids

52.41

Weight (kDa)

8.13

Isoelectric Point (pI)

38.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 12 - 247 1.3e-80 Glycosyltransferase, N-terminal domain
UDPGT PF00201 266 - 394 1.8e-20 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19260 AT1G41920 AT1G42710 AT2G06541 AT2G06541 AT3G29450 AT3G29763 AT3G29765 AT3G31402 AT3G31402 AT4G09660
fragaria_vesca FvH4_1g22711 FvH4_3g10612 FvH4_3g23261 FvH4_3g31623 FvH4_3g33391 FvH4_3g37321 FvH4_3g43192 FvH4_3g43193 FvH4_4g00181 FvH4_4g00251 FvH4_4g08751 FvH4_4g15271 FvH4_5g27190 FvH4_6g02122 FvH4_6g26880 FvH4_6g35121 FvH4_7g16871 FvH4_7g19080 FvH4_7g30071
malus_domestica MD02G1162100.v1.1 MD03G1081700.v1.1 MD09G1280500.v1.1 MD12G1083800.v1.1 MD12G1128200.v1.1
prunus_persica Prupe.7G129800_v2.0.a1
pyrus_communis pycom01g08000 pycom02g13840 pycom02g18030 pycom04g01290 pycom04g12580 pycom05g02550 pycom05g06740 pycom05g26200 pycom07g09850 pycom08g10610 pycom10g11280 pycom11g12580 pycom11g22260 pycom12g18440 pycom13g20080 pycom15g25600 pycom16g23600 pycom17g10070
rosa_chinensis RchiOBHm_Chr1g0313551 RchiOBHm_Chr1g0364331 RchiOBHm_Chr1g0369741 RchiOBHm_Chr1g0380371 RchiOBHm_Chr2g0097391 RchiOBHm_Chr2g0113561 RchiOBHm_Chr2g0114151 RchiOBHm_Chr2g0119761 RchiOBHm_Chr2g0149851 RchiOBHm_Chr2g0151931 RchiOBHm_Chr2g0166411 RchiOBHm_Chr3g0453661 RchiOBHm_Chr3g0466101 RchiOBHm_Chr3g0477911 RchiOBHm_Chr3g0486441 RchiOBHm_Chr4g0390161 RchiOBHm_Chr4g0392191 RchiOBHm_Chr4g0414461 RchiOBHm_Chr4g0421421 RchiOBHm_Chr5g0023801 RchiOBHm_Chr5g0040121 RchiOBHm_Chr5g0045381 RchiOBHm_Chr5g0061511 RchiOBHm_Chr5g0062621 RchiOBHm_Chr5g0064161 RchiOBHm_Chr5g0068711 RchiOBHm_Chr6g0246041 RchiOBHm_Chr6g0252511 RchiOBHm_Chr6g0252521 RchiOBHm_Chr6g0263361 RchiOBHm_Chr6g0269451 RchiOBHm_Chr6g0275351 RchiOBHm_Chr6g0288481 RchiOBHm_Chr6g0310011 RchiOBHm_Chr6g0310021 RchiOBHm_Chr7g0223071 RchiOBHm_Chr7g0227621 RchiOBHm_Chr7g0242581
rosa_laevigata RLG00000033957
rosa_multiflora Rmu_co8455865.1_g000001 Rmu_sc0000021.1_g000011 Rmu_sc0000079.1_g000049 Rmu_sc0000087.1_g000015 Rmu_sc0000151.1_g000008 Rmu_sc0000365.1_g000014 Rmu_sc0000446.1_g000054 Rmu_sc0000446.1_g000055 Rmu_sc0000534.1_g000006 Rmu_sc0000724.1_g000020 Rmu_sc0000859.1_g000001 Rmu_sc0000876.1_g000002 Rmu_sc0000881.1_g000005 Rmu_sc0000929.1_g000014 Rmu_sc0001112.1_g000004 Rmu_sc0001136.1_g000009 Rmu_sc0001353.1_g000064 Rmu_sc0001662.1_g000005 Rmu_sc0001764.1_g000006 Rmu_sc0001982.1_g000015 Rmu_sc0002052.1_g000008 Rmu_sc0002052.1_g000009 Rmu_sc0002158.1_g000011 Rmu_sc0002285.1_g000005 Rmu_sc0002983.1_g000025 Rmu_sc0003063.1_g000006 Rmu_sc0003076.1_g000005 Rmu_sc0003221.1_g000053 Rmu_sc0003382.1_g000010 Rmu_sc0003733.1_g000054 Rmu_sc0003997.1_g000005 Rmu_sc0004283.1_g000008 Rmu_sc0004283.1_g000053 Rmu_sc0004509.1_g000007 Rmu_sc0004540.1_g000028 Rmu_sc0004657.1_g000005 Rmu_sc0004935.1_g000006 Rmu_sc0005072.1_g000003 Rmu_sc0005248.1_g000001 Rmu_sc0006161.1_g000001 Rmu_sc0006209.1_g000005 Rmu_sc0006576.1_g000018 Rmu_sc0006576.1_g000019 Rmu_sc0007121.1_g000016 Rmu_sc0007121.1_g000032 Rmu_sc0007753.1_g000016 Rmu_sc0007795.1_g000009 Rmu_sc0007841.1_g000019 Rmu_sc0008339.1_g000021 Rmu_sc0008339.1_g000022 Rmu_sc0008432.1_g000001 Rmu_sc0008633.1_g000009 Rmu_sc0009104.1_g000013 Rmu_sc0011469.1_g000001 Rmu_sc0012039.1_g000001 Rmu_sc0013947.1_g000007 Rmu_sc0015560.1_g000001 Rmu_sc0017369.1_g000001 Rmu_sc0021648.1_g000001 Rmu_sc0022867.1_g000003 Rmu_sc0027801.1_g000001 Rmu_sc0027801.1_g000002 Rmu_sc0029861.1_g000001 Rmu_sc0030314.1_g000001 Rmu_sc0040149.1_g000001 Rmu_ssc0000089.1_g000028 Rmu_ssc0000480.1_g000033
rosa_roxburghii Rroxscaffold_1G00002540 Rroxscaffold_1G00013960 Rroxscaffold_1G00041160 Rroxscaffold_1G00045580 Rroxscaffold_3G00247310 Rroxscaffold_3G00267070 Rroxscaffold_4G00313830 Rroxscaffold_5G00372270 Rroxscaffold_6G00404800 Rroxscaffold_6G00406090
rosa_rugosa Rorug03G0269800 Rorug04G0142900 Rorug04G0152600 Rorug05G0223300.1 Rorug05G0266400 Rorug06G0008900 Rorug07G0086000 Rorug07G0205800 Rorug07G0270900
rosa_wichuraiana Rw0G001600 Rw0G017220 Rw0G017620 Rw0G018380 Rw1G002320 Rw1G020940 Rw1G021200 Rw1G022610 Rw1G038680 Rw2G013320 Rw2G016850 Rw2G024020 Rw2G025210 Rw2G032270 Rw2G039490 Rw2G041630 Rw2G048450 Rw2G051510 Rw3G025320 Rw4G003260 Rw4G007300 Rw4G009290 Rw4G010910 Rw4G013260 Rw5G008190 Rw5G008290 Rw5G018740 Rw5G023640 Rw5G028800 Rw5G031830 Rw5G041280 Rw5G044050 Rw6G007060 Rw6G008230 Rw6G009960 Rw6G013460 Rw6G014610 Rw6G017780 Rw6G033200 Rw7G021340 Rw7G023750 Rw7G032290 Rw7G032450 Rw7G033880 Rw7G038580 Rw7G040180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1030
AccB7I CCANNNNNTGG 1 cut(s) 424
AciI CCGC 6 cut(s) 100, 111, 328, 471, 1292, 1356
AclWI GGATC 2 cut(s) 195, 1288
AcoI YGGCCR 1 cut(s) 1139
AcsI RAATTY 1 cut(s) 899
AcyI GRCGYC 1 cut(s) 1031
AfaI GTAC 3 cut(s) 351, 629, 677
AfiI CCNNNNNNNGG 4 cut(s) 68, 184, 424, 568
AflIII ACRYGT 1 cut(s) 771
AgsI TTSAA 3 cut(s) 311, 736, 1248
AjiI CACGTC 1 cut(s) 424
AjuI GAANNNNNNNTTGG 2 cut(s) 291, 323
AluBI AGCT 6 cut(s) 85, 169, 523, 633, 973, 1234
AluI AGCT 6 cut(s) 85, 169, 523, 633, 973, 1234
Alw21I GWGCWC 2 cut(s) 274, 1191
Alw26I GTCTC 2 cut(s) 569, 945
Alw44I GTGCAC 1 cut(s) 270
AlwI GGATC 2 cut(s) 195, 1288
Ama87I CYCGRG 2 cut(s) 566, 1365
AoxI GGCC 3 cut(s) 70, 728, 1139
ApaLI GTGCAC 1 cut(s) 270
ApoI RAATTY 1 cut(s) 899
ArsI GACNNNNNNTTYG 2 cut(s) 575, 607
Asp700I GAANNNNTTC 1 cut(s) 514
AspLEI GCGC 1 cut(s) 1033
AspS9I GGNCC 3 cut(s) 538, 728, 1153
AsuC2I CCSGG 1 cut(s) 740
AsuHPI GGTGA 6 cut(s) 223, 713, 944, 1105, 1241, 1264
AvaI CYCGRG 2 cut(s) 566, 1365
AvaII GGWCC 2 cut(s) 538, 1153
BaeGI GKGCMC 1 cut(s) 274
BanI GGYRCC 1 cut(s) 1030
BbsI GAAGAC 1 cut(s) 1371
Bbv12I GWGCWC 2 cut(s) 274, 1191
BccI CCATC 7 cut(s) 242, 330, 440, 1083, 1253, 1270, 1339
BceAI ACGGC 2 cut(s) 217, 715
BcnI CCSGG 1 cut(s) 740
BcoDI GTCTC 2 cut(s) 569, 945
BfaI CTAG 5 cut(s) 267, 359, 524, 1182, 1401
BfoI RGCGCY 1 cut(s) 1034
Bme1390I CCNGG 1 cut(s) 740
Bme18I GGWCC 2 cut(s) 538, 1153
BmeT110I CYCGRG 2 cut(s) 566, 1365
BmgBI CACGTC 1 cut(s) 424
BmgT120I GGNCC 3 cut(s) 538, 728, 1153
BmiI GGNNCC 4 cut(s) 54, 142, 430, 1032
BmrFI CCNGG 1 cut(s) 740
BmrI ACTGGG 2 cut(s) 329, 1030
BmsI GCATC 4 cut(s) 651, 790, 910, 1134
BmuI ACTGGG 2 cut(s) 329, 1030
BpiI GAAGAC 1 cut(s) 1371
BpmI CTGGAG 1 cut(s) 1305
Bpu10I CCTNAGC 2 cut(s) 634, 969
BpuMI CCSGG 1 cut(s) 740
BsaHI GRCGYC 1 cut(s) 1031
BsaI GGTCTC 1 cut(s) 945
BsaJI CCNNGG 2 cut(s) 178, 1116
BsaXI ACNNNNNCTCC 8 cut(s) 223, 253, 942, 972, 1002, 1032, 1034, 1064
Bsc4I CCNNNNNNNGG 4 cut(s) 68, 184, 424, 568
Bse118I RCCGGY 1 cut(s) 61
Bse1I ACTGG 2 cut(s) 335, 1036
BseDI CCNNGG 2 cut(s) 178, 1116
BseGI GGATG 6 cut(s) 120, 234, 387, 414, 1094, 1300
BseLI CCNNNNNNNGG 4 cut(s) 68, 184, 424, 568
BseMII CTCAG 4 cut(s) 210, 380, 648, 822
BseNI ACTGG 2 cut(s) 335, 1036
BseRI GAGGAG 1 cut(s) 77
BseSI GKGCMC 1 cut(s) 274
BseYI CCCAGC 1 cut(s) 183
BsgI GTGCAG 1 cut(s) 1286
BshFI GGCC 3 cut(s) 72, 730, 1141
BshNI GGYRCC 1 cut(s) 1030
BsiHKAI GWGCWC 2 cut(s) 274, 1191
BsiHKCI CYCGRG 2 cut(s) 566, 1365
BsiSI CCGG 2 cut(s) 62, 740
BslFI GGGAC 2 cut(s) 82, 542
BslI CCNNNNNNNGG 4 cut(s) 68, 184, 424, 568
BsmAI GTCTC 2 cut(s) 569, 945
BsmBI CGTCTC 1 cut(s) 569
BsmFI GGGAC 2 cut(s) 82, 542
BsnI GGCC 3 cut(s) 72, 730, 1141
Bso31I GGTCTC 1 cut(s) 945
BsoBI CYCGRG 2 cut(s) 566, 1365
Bsp1286I GDGCHC 2 cut(s) 274, 1191
Bsp143I GATC 3 cut(s) 187, 858, 1280
Bsp19I CCATGG 1 cut(s) 1116
BspACI CCGC 6 cut(s) 100, 111, 328, 471, 1292, 1356
BspANI GGCC 3 cut(s) 72, 730, 1141
BspCNI CTCAG 4 cut(s) 209, 379, 647, 821
BspLI GGNNCC 4 cut(s) 54, 142, 430, 1032
BspPI GGATC 2 cut(s) 195, 1288
BspT107I GGYRCC 1 cut(s) 1030
BspTNI GGTCTC 1 cut(s) 945
BsrFI RCCGGY 1 cut(s) 61
BsrI ACTGG 2 cut(s) 335, 1036
BssAI RCCGGY 1 cut(s) 61
BssECI CCNNGG 2 cut(s) 178, 1116
BssMI GATC 3 cut(s) 187, 858, 1280
BssNI GRCGYC 1 cut(s) 1031
BssT1I CCWWGG 2 cut(s) 178, 1116
Bst4CI ACNGT 4 cut(s) 158, 466, 556, 1171
Bst6I CTCTTC 1 cut(s) 1301
BstACI GRCGYC 1 cut(s) 1031
BstDEI CTNAG 8 cut(s) 196, 279, 366, 519, 634, 689, 808, 969
BstDSI CCRYGG 1 cut(s) 1116
BstEII GGTNACC 1 cut(s) 932
BstF5I GGATG 6 cut(s) 120, 234, 387, 414, 1094, 1300
BstH2I RGCGCY 1 cut(s) 1034
BstHHI GCGC 1 cut(s) 1033
BstKTI GATC 3 cut(s) 190, 861, 1283
BstMAI GTCTC 2 cut(s) 569, 945
BstMBI GATC 3 cut(s) 187, 858, 1280
BstMWI GCNNNNNNNGC 2 cut(s) 520, 639
BstNSI RCATGY 2 cut(s) 775, 1137
BstPI GGTNACC 1 cut(s) 932
BstSCI CCNGG 1 cut(s) 738
BstSLI GKGCMC 1 cut(s) 274
BstV2I GAAGAC 1 cut(s) 1371
BstX2I RGATCY 1 cut(s) 1280
BstYI RGATCY 1 cut(s) 1280
BsuRI GGCC 3 cut(s) 72, 730, 1141
BtgI CCRYGG 1 cut(s) 1116
BtrI CACGTC 1 cut(s) 424
BtsCI GGATG 6 cut(s) 120, 234, 387, 414, 1094, 1300
BtsIMutI CAGTG 1 cut(s) 462
CfoI GCGC 1 cut(s) 1033
Cfr10I RCCGGY 1 cut(s) 61
Cfr13I GGNCC 3 cut(s) 538, 728, 1153
Csp6I GTAC 3 cut(s) 350, 628, 676
CviQI GTAC 3 cut(s) 350, 628, 676
DdeI CTNAG 8 cut(s) 196, 279, 366, 519, 634, 689, 808, 969
DinI GGCGCC 1 cut(s) 1032
DpnI GATC 3 cut(s) 189, 860, 1282
DpnII GATC 3 cut(s) 187, 858, 1280
EaeI YGGCCR 1 cut(s) 1139
Eam1104I CTCTTC 1 cut(s) 1301
EarI CTCTTC 1 cut(s) 1301
EciI GGCGGA 4 cut(s) 100, 317, 460, 1371
Eco130I CCWWGG 2 cut(s) 178, 1116
Eco31I GGTCTC 1 cut(s) 945
Eco47I GGWCC 2 cut(s) 538, 1153
Eco88I CYCGRG 2 cut(s) 566, 1365
Eco91I GGTNACC 1 cut(s) 932
EcoO65I GGTNACC 1 cut(s) 932
EcoT14I CCWWGG 2 cut(s) 178, 1116
EcoT22I ATGCAT 1 cut(s) 1103
EgeI GGCGCC 1 cut(s) 1032
EheI GGCGCC 1 cut(s) 1032
ErhI CCWWGG 2 cut(s) 178, 1116
Esp3I CGTCTC 1 cut(s) 569
FalI AAGNNNNNCTT 2 cut(s) 153, 185
FaqI GGGAC 2 cut(s) 82, 542
FauI CCCGC 1 cut(s) 107
FokI GGATG 6 cut(s) 107, 221, 374, 401, 1101, 1307
FspBI CTAG 5 cut(s) 267, 359, 524, 1182, 1401
GlaI GCGC 1 cut(s) 1032
GsaI CCCAGC 1 cut(s) 187
GsuI CTGGAG 1 cut(s) 1305
HaeII RGCGCY 1 cut(s) 1034
HaeIII GGCC 3 cut(s) 72, 730, 1141
HapII CCGG 2 cut(s) 62, 740
HhaI GCGC 1 cut(s) 1033
Hin1I GRCGYC 1 cut(s) 1031
Hin6I GCGC 1 cut(s) 1031
HinP1I GCGC 1 cut(s) 1031
HindIII AAGCTT 2 cut(s) 167, 971
HinfI GANTC 5 cut(s) 174, 395, 446, 500, 1045
HpaII CCGG 2 cut(s) 62, 740
HphI GGTGA 6 cut(s) 223, 713, 944, 1105, 1241, 1264
Hpy166II GTNNAC 3 cut(s) 130, 272, 439
Hpy188I TCNGA 3 cut(s) 140, 199, 1153
Hpy188III TCNNGA 3 cut(s) 566, 977, 1284
Hpy8I GTNNAC 3 cut(s) 130, 272, 439
Hpy99I CGWCG 1 cut(s) 587
HpyAV CCTTC 8 cut(s) 297, 466, 484, 521, 525, 662, 974, 1218
HpyCH4III ACNGT 4 cut(s) 158, 466, 556, 1171
HpyCH4IV ACGT 1 cut(s) 423
HpyCH4V TGCA 4 cut(s) 272, 1101, 1147, 1267
HpyF10VI GCNNNNNNNGC 2 cut(s) 520, 639
HpyF3I CTNAG 8 cut(s) 196, 279, 366, 519, 634, 689, 808, 969
HpySE526I ACGT 1 cut(s) 423
Hsp92I GRCGYC 1 cut(s) 1031
HspAI GCGC 1 cut(s) 1031
KasI GGCGCC 1 cut(s) 1030
Kzo9I GATC 3 cut(s) 187, 858, 1280
LmnI GCTCC 2 cut(s) 90, 639
LweI GCATC 4 cut(s) 651, 790, 910, 1134
MaeI CTAG 5 cut(s) 267, 359, 524, 1182, 1401
MaeII ACGT 1 cut(s) 423
MaeIII GTNAC 4 cut(s) 932, 1111, 1177, 1237
MalI GATC 3 cut(s) 189, 860, 1282
MboI GATC 3 cut(s) 187, 858, 1280
MboII GAAGA 4 cut(s) 896, 1236, 1318, 1371
MfeI CAATTG 2 cut(s) 504, 1062
MflI RGATCY 1 cut(s) 1280
MhlI GDGCHC 2 cut(s) 274, 1191
MluCI AATT 6 cut(s) 218, 504, 695, 899, 1062, 1271
Mly113I GGCGCC 1 cut(s) 1031
MlyI GAGTC 3 cut(s) 183, 389, 455
MmeI TCCRAC 5 cut(s) 33, 118, 322, 861, 1020
Mph1103I ATGCAT 1 cut(s) 1103
MroXI GAANNNNTTC 1 cut(s) 514
MseI TTAA 2 cut(s) 648, 914
MslI CAYNNNNRTG 1 cut(s) 842
MspI CCGG 2 cut(s) 62, 740
MspR9I CCNGG 1 cut(s) 740
MunI CAATTG 2 cut(s) 504, 1062
MwoI GCNNNNNNNGC 2 cut(s) 520, 639
NarI GGCGCC 1 cut(s) 1031
NciI CCSGG 1 cut(s) 740
NcoI CCATGG 1 cut(s) 1116
NdeII GATC 3 cut(s) 187, 858, 1280
NlaIV GGNNCC 4 cut(s) 54, 142, 430, 1032
NmuCI GTSAC 3 cut(s) 932, 1111, 1237
NsiI ATGCAT 1 cut(s) 1103
NspI RCATGY 2 cut(s) 775, 1137
PaeR7I CTCGAG 1 cut(s) 566
PciI ACATGT 1 cut(s) 771
PcsI WCGNNNNNNNCGW 2 cut(s) 390, 441
PdmI GAANNNNTTC 1 cut(s) 514
PfeI GAWTC 2 cut(s) 500, 1045
PflFI GACNNNGTC 1 cut(s) 554
PflMI CCANNNNNTGG 1 cut(s) 424
PleI GAGTC 3 cut(s) 182, 389, 454
PluTI GGCGCC 1 cut(s) 1034
PpsI GAGTC 3 cut(s) 182, 389, 454
PscI ACATGT 1 cut(s) 771
PspEI GGTNACC 1 cut(s) 932
PspFI CCCAGC 1 cut(s) 183
PspN4I GGNNCC 4 cut(s) 54, 142, 430, 1032
PspPI GGNCC 3 cut(s) 538, 728, 1153
PsuI RGATCY 1 cut(s) 1280
PsyI GACNNNGTC 1 cut(s) 554
RsaI GTAC 3 cut(s) 351, 629, 677
RsaNI GTAC 3 cut(s) 350, 628, 676
RseI CAYNNNNRTG 1 cut(s) 842
SaqAI TTAA 2 cut(s) 648, 914
Sau3AI GATC 3 cut(s) 187, 858, 1280
Sau96I GGNCC 3 cut(s) 538, 728, 1153
SchI GAGTC 3 cut(s) 183, 389, 455
ScrFI CCNGG 1 cut(s) 740
SduI GDGCHC 2 cut(s) 274, 1191
SfaNI GCATC 4 cut(s) 651, 790, 910, 1134
SfoI GGCGCC 1 cut(s) 1032
Sfr274I CTCGAG 1 cut(s) 566
SinI GGWCC 2 cut(s) 538, 1153
SlaI CTCGAG 1 cut(s) 566
SmiMI CAYNNNNRTG 1 cut(s) 842
SmlI CTYRAG 1 cut(s) 566
SmoI CTYRAG 1 cut(s) 566
Sse9I AATT 6 cut(s) 218, 504, 695, 899, 1062, 1271
SsiI CCGC 6 cut(s) 100, 111, 328, 471, 1292, 1356
SspDI GGCGCC 1 cut(s) 1030
SspMI CTAG 5 cut(s) 267, 359, 524, 1182, 1401
StyD4I CCNGG 1 cut(s) 738
StyI CCWWGG 2 cut(s) 178, 1116
TaaI ACNGT 4 cut(s) 158, 466, 556, 1171
TaiI ACGT 1 cut(s) 426
TaqI TCGA 3 cut(s) 172, 567, 1343
TasI AATT 6 cut(s) 218, 504, 695, 899, 1062, 1271
TatI WGTACW 2 cut(s) 627, 675
TfiI GAWTC 2 cut(s) 500, 1045
Tru1I TTAA 2 cut(s) 648, 914
Tru9I TTAA 2 cut(s) 648, 914
TscAI CASTG 1 cut(s) 469
TseFI GTSAC 3 cut(s) 932, 1111, 1237
Tsp45I GTSAC 3 cut(s) 932, 1111, 1237
TspDTI ATGAA 6 cut(s) 48, 630, 867, 892, 1002, 1371
TspGWI ACGGA 2 cut(s) 400, 963
TspRI CASTG 1 cut(s) 469
Tth111I GACNNNGTC 1 cut(s) 554
Van91I CCANNNNNTGG 1 cut(s) 424
VneI GTGCAC 1 cut(s) 270
VpaK11BI GGWCC 2 cut(s) 538, 1153
XapI RAATTY 1 cut(s) 899
XceI RCATGY 2 cut(s) 775, 1137
XhoI CTCGAG 1 cut(s) 566
XmnI GAANNNNTTC 1 cut(s) 514
XspI CTAG 5 cut(s) 267, 359, 524, 1182, 1401
Zsp2I ATGCAT 1 cut(s) 1103
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.