Rw2G013320

Zinc finger MYM-type protein 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000122
Physical Location & Seq
Reverse (-)
14100483 .. 14102821
2339 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G013320.1

Sequence Viewer

Length: 2004 bp
ATGGTGGACCTTCCATCGGATCCTGGCTTGAGAGCTCCGATTTTAGATTACGATCCAAATGTTCGAGATGAAATTCGAAGACATTATTTACAGCAAGGGCCTTGTCAACCGAAAAATCATGAATTTCCTTACTCTTTTTTTGGAAATGAGCAACGACGGTTCAAGCCTGTTTGGTTCGATAAATTCTCTAATTGGTTAGAATATAGCATTGATAAAGATTCTGCATTTTGTTTGTGCTGCTACCTTTTCAAGCCAAATAATGGTGAACAAGCTGGTGGGAAATCATTTGTTGCTAAAGGTTTTAACAATTGGAAGAAAAGTGAAAGACTTGGACAACATGTTGGAAATCATAATAGCTCTCATAATCAGTCTTACAAGAAGTGTGAAGCTTTAATGAATGAAAGGCAACATATTCAAAATATTGTCATCAAGAAGAACATTAGAGATCCAATTAGCTATCGAATTCGTTTAGCTGCATCACTTGATTGCATTCGATTCCTTTTAAGGCAAGGACTTGCATTTCGTGGTCATGATGAGTCCGAGGAGTCAAGTAACCAAGGTAACTTCCTTGAATTATTGACTTTTCTTGCCGATCACAATGAGGAAATTAGAGCTGTTGCTTTGAAAAATGCTCCTGAAAATCTTAGAATGACTTCACCAAAGATCCAAAAAGATATTGTAAATGCATGTGCGGTTGAAACAATTAATGTTGTTATTAAAGAAATTGGAGATGCTGTATTTTCTATTTTAGTTGATGAATCTCGTGATGTATCCATAAAGGAGCAAATGGTGGTAATGTTTCGTTATGTGGACAAAAGAGGGAATGTGATTGAACGGTTCATTGGTATTGAACATGTTGCTAACACCACGGCCGTCTCGCTTAAGATAGCAATTGATAAGCTATTTTCAAAGCACGGGTTGAGCATATCTAGGTTACGAGGTCAAGGATATGATGGTGCTAGTAACATGAGTGGAGAGTTCAATGGTTTGAAAACTATTATCATGAGGGAGAATGAATGTGCTTTCTTTGTTCATTGTTTTGCTCATCAACTACAATTGGCACTTATGGGTGTGGCAAAAAAGCATGGTGTAATAGGTACTTTCTTCACTGTAGTATCTAATGTGGTGAATATTGTTGGAGCATCATCCAAGCGTTGCGACATTCTTCGTGAAAAACATGCTTTAAAAGTCATTGAAGCCTTAAAAAGTGAAATTGGGATTAAACGACCATGTGATACACGTTGGGGCACACATTTCGGTACTTTGGTAAGCTTTACTACCATGTTTTCATCTATCGTTGATGTGCTTGAGGAAATTGCAAATGATAGATTGAATAGTGAACAAAAAACTGAAGCATCCACTTCGTTACGCTTGTTGTCACAAGTCTTACAAAAAGATGATCAAGATATTGTGAATGCCATGAATTTAGTTAAAGCATGCAAGCAACAATTACAGATGATGAGGGACAATGGATGGAATTCTTTATTGGAGGAAGTGTCTAAGCTCAATAATCGTTTCAACGAGGCTAATACTGAGTTGTTGCTTTGTTTGGCATGTTTATCTCCTAATGATTCATTTTCTGCTTTTGACAAGAGAAAGTTGATCCGCCTTGCTCAATTGTACTCACATGATTTTTCTTCCATGGATCTACGAGTGCTAGAAAGTCAGCTGCAAACTTATGTTAATGGCATGCGTTCTAATGCAAATTTTTCCGAATTGAAAGGAATTGCTGAACTTGCCAAAAGACTAGTGGAGACAAGAAAGCATGAGGTATATCCATTAGTTTATTTGCTCATTAAATTGGCATTAACACTTCCGGTTGCAACAGCTTCTGTAGAACGGGCATTCTCTGCTATGAATATTGTGAAGAATCAAATGCGAAACAAAATGGGAGATCAATGGTTGAATGATTGTTTGACTGTGTATCTTGAAAAAGATGTATTTAATGCTATTGACAATGAGCCTATTATCCAGCGTTTTCAGAACATGAAGTCTCGTCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

667

Amino Acids

76.06

Weight (kDa)

8.71

Isoelectric Point (pI)

42.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 95 - 329 2.2e-83 Domain of unknown function (DUF4371)
Dimer_Tnp_hAT PF05699 587 - 645 9.4e-07 hAT family C-terminal dimerisation region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19260 AT1G41920 AT1G42710 AT2G06541 AT2G06541 AT3G29450 AT3G29763 AT3G29765 AT3G31402 AT3G31402 AT4G09660
fragaria_vesca FvH4_1g22711 FvH4_3g10612 FvH4_3g23261 FvH4_3g31623 FvH4_3g33391 FvH4_3g37321 FvH4_3g43192 FvH4_3g43193 FvH4_4g00181 FvH4_4g00251 FvH4_4g08751 FvH4_4g15271 FvH4_5g27190 FvH4_6g02122 FvH4_6g26880 FvH4_6g35121 FvH4_7g16871 FvH4_7g19080 FvH4_7g30071
malus_domestica MD02G1162100.v1.1 MD03G1081700.v1.1 MD09G1280500.v1.1 MD12G1083800.v1.1 MD12G1128200.v1.1
prunus_persica Prupe.7G129800_v2.0.a1
pyrus_communis pycom01g08000 pycom02g13840 pycom02g18030 pycom04g01290 pycom04g12580 pycom05g02550 pycom05g06740 pycom05g26200 pycom07g09850 pycom08g10610 pycom10g11280 pycom11g12580 pycom11g22260 pycom12g18440 pycom13g20080 pycom15g25600 pycom16g23600 pycom17g10070
rosa_chinensis RchiOBHm_Chr1g0313551 RchiOBHm_Chr1g0364331 RchiOBHm_Chr1g0369741 RchiOBHm_Chr1g0380371 RchiOBHm_Chr2g0097391 RchiOBHm_Chr2g0113561 RchiOBHm_Chr2g0114151 RchiOBHm_Chr2g0119761 RchiOBHm_Chr2g0149851 RchiOBHm_Chr2g0151931 RchiOBHm_Chr2g0166411 RchiOBHm_Chr3g0453661 RchiOBHm_Chr3g0466101 RchiOBHm_Chr3g0477911 RchiOBHm_Chr3g0486441 RchiOBHm_Chr4g0390161 RchiOBHm_Chr4g0392191 RchiOBHm_Chr4g0414461 RchiOBHm_Chr4g0421421 RchiOBHm_Chr5g0023801 RchiOBHm_Chr5g0040121 RchiOBHm_Chr5g0045381 RchiOBHm_Chr5g0061511 RchiOBHm_Chr5g0062621 RchiOBHm_Chr5g0064161 RchiOBHm_Chr5g0068711 RchiOBHm_Chr6g0246041 RchiOBHm_Chr6g0252511 RchiOBHm_Chr6g0252521 RchiOBHm_Chr6g0263361 RchiOBHm_Chr6g0269451 RchiOBHm_Chr6g0275351 RchiOBHm_Chr6g0288481 RchiOBHm_Chr6g0310011 RchiOBHm_Chr6g0310021 RchiOBHm_Chr7g0223071 RchiOBHm_Chr7g0227621 RchiOBHm_Chr7g0242581
rosa_laevigata RLG00000033957
rosa_multiflora Rmu_co8455865.1_g000001 Rmu_sc0000021.1_g000011 Rmu_sc0000079.1_g000049 Rmu_sc0000087.1_g000015 Rmu_sc0000151.1_g000008 Rmu_sc0000365.1_g000014 Rmu_sc0000446.1_g000054 Rmu_sc0000446.1_g000055 Rmu_sc0000534.1_g000006 Rmu_sc0000724.1_g000020 Rmu_sc0000859.1_g000001 Rmu_sc0000876.1_g000002 Rmu_sc0000881.1_g000005 Rmu_sc0000929.1_g000014 Rmu_sc0001112.1_g000004 Rmu_sc0001136.1_g000009 Rmu_sc0001353.1_g000064 Rmu_sc0001662.1_g000005 Rmu_sc0001764.1_g000006 Rmu_sc0001982.1_g000015 Rmu_sc0002052.1_g000008 Rmu_sc0002052.1_g000009 Rmu_sc0002158.1_g000011 Rmu_sc0002285.1_g000005 Rmu_sc0002983.1_g000025 Rmu_sc0003063.1_g000006 Rmu_sc0003076.1_g000005 Rmu_sc0003221.1_g000053 Rmu_sc0003382.1_g000010 Rmu_sc0003733.1_g000054 Rmu_sc0003997.1_g000005 Rmu_sc0004283.1_g000008 Rmu_sc0004283.1_g000053 Rmu_sc0004509.1_g000007 Rmu_sc0004540.1_g000028 Rmu_sc0004657.1_g000005 Rmu_sc0004935.1_g000006 Rmu_sc0005072.1_g000003 Rmu_sc0005248.1_g000001 Rmu_sc0006161.1_g000001 Rmu_sc0006209.1_g000005 Rmu_sc0006576.1_g000018 Rmu_sc0006576.1_g000019 Rmu_sc0007121.1_g000016 Rmu_sc0007121.1_g000032 Rmu_sc0007753.1_g000016 Rmu_sc0007795.1_g000009 Rmu_sc0007841.1_g000019 Rmu_sc0008339.1_g000021 Rmu_sc0008339.1_g000022 Rmu_sc0008432.1_g000001 Rmu_sc0008633.1_g000009 Rmu_sc0009104.1_g000013 Rmu_sc0011469.1_g000001 Rmu_sc0012039.1_g000001 Rmu_sc0013947.1_g000007 Rmu_sc0015560.1_g000001 Rmu_sc0017369.1_g000001 Rmu_sc0021648.1_g000001 Rmu_sc0022867.1_g000003 Rmu_sc0027801.1_g000001 Rmu_sc0027801.1_g000002 Rmu_sc0029861.1_g000001 Rmu_sc0030314.1_g000001 Rmu_sc0040149.1_g000001 Rmu_ssc0000089.1_g000028 Rmu_ssc0000480.1_g000033
rosa_roxburghii Rroxscaffold_1G00002540 Rroxscaffold_1G00013960 Rroxscaffold_1G00041160 Rroxscaffold_1G00045580 Rroxscaffold_3G00247310 Rroxscaffold_3G00267070 Rroxscaffold_4G00313830 Rroxscaffold_5G00372270 Rroxscaffold_6G00404800 Rroxscaffold_6G00406090
rosa_rugosa Rorug03G0269800 Rorug04G0142900 Rorug04G0152600 Rorug05G0223300.1 Rorug05G0266400 Rorug06G0008900 Rorug07G0086000 Rorug07G0205800 Rorug07G0270900
rosa_wichuraiana Rw0G001600 Rw0G017220 Rw0G017620 Rw0G018380 Rw1G002320 Rw1G020940 Rw1G021200 Rw1G022610 Rw1G038680 Rw2G013320 Rw2G016850 Rw2G024020 Rw2G025210 Rw2G032270 Rw2G039490 Rw2G041630 Rw2G048450 Rw2G051510 Rw3G025320 Rw4G003260 Rw4G007300 Rw4G009290 Rw4G010910 Rw4G013260 Rw5G008190 Rw5G008290 Rw5G018740 Rw5G023640 Rw5G028800 Rw5G031830 Rw5G041280 Rw5G044050 Rw6G007060 Rw6G008230 Rw6G009960 Rw6G013460 Rw6G014610 Rw6G017780 Rw6G033200 Rw7G021340 Rw7G023750 Rw7G032290 Rw7G032450 Rw7G033880 Rw7G038580 Rw7G040180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 260
AciI CCGC 2 cut(s) 692, 1606
AclWI GGATC 7 cut(s) 14, 27, 47, 440, 658, 1597, 1653
AcoI YGGCCR 1 cut(s) 870
AcsI RAATTY 7 cut(s) 72, 122, 182, 462, 1423, 1477, 1705
AcuI CTGAAG 1 cut(s) 1371
AfaI GTAC 3 cut(s) 1099, 1261, 1622
AfiI CCNNNNNNNGG 2 cut(s) 16, 260
AflII CTTAAG 1 cut(s) 881
AflIII ACRYGT 3 cut(s) 337, 853, 1238
AhlI ACTAGT 1 cut(s) 1747
AjnI CCWGG 1 cut(s) 22
AjuI GAANNNNNNNTTGG 4 cut(s) 825, 857, 1469, 1501
Alw21I GWGCWC 1 cut(s) 37
Alw26I GTCTC 3 cut(s) 880, 1748, 1998
AlwI GGATC 7 cut(s) 14, 27, 47, 440, 658, 1597, 1653
AlwNI CAGNNNCTG 1 cut(s) 1832
AoxI GGCC 2 cut(s) 98, 870
ApeKI GCWGC 3 cut(s) 237, 473, 1669
ApoI RAATTY 7 cut(s) 72, 122, 182, 462, 1423, 1477, 1705
ArsI GACNNNNNNTTYG 2 cut(s) 504, 536
AseI ATTAAT 1 cut(s) 705
Asp700I GAANNNNTTC 1 cut(s) 652
AspS9I GGNCC 2 cut(s) 7, 98
AsuHPI GGTGA 3 cut(s) 275, 648, 1138
AsuII TTCGAA 1 cut(s) 76
AvaII GGWCC 1 cut(s) 7
BaeGI GKGCMC 1 cut(s) 1250
BaeI ACNNNNGTAYC 4 cut(s) 1098, 1131, 1251, 1284
BamHI GGATCC 1 cut(s) 19
BanII GRGCYC 1 cut(s) 37
BauI CACGAG 1 cut(s) 762
BbsI GAAGAC 1 cut(s) 85
Bbv12I GWGCWC 1 cut(s) 37
BbvI GCAGC 3 cut(s) 224, 460, 1656
BccI CCATC 3 cut(s) 22, 947, 1467
BceAI ACGGC 2 cut(s) 857, 885
BcgI CGANNNNNNTGC 4 cut(s) 1237, 1271, 1344, 1378
BciT130I CCWGG 1 cut(s) 24
BciVI GTATCC 1 cut(s) 781
BclI TGATCA 1 cut(s) 1399
BcoDI GTCTC 3 cut(s) 880, 1748, 1998
BcuI ACTAGT 1 cut(s) 1747
BfaI CTAG 4 cut(s) 930, 960, 1658, 1748
BfmI CTRYAG 2 cut(s) 1110, 1833
BfrI CTTAAG 1 cut(s) 881
BfuI GTATCC 1 cut(s) 781
BisI GCNGC 3 cut(s) 238, 474, 1670
BlsI GCNGC 3 cut(s) 239, 475, 1671
Bme1390I CCNGG 1 cut(s) 24
Bme18I GGWCC 1 cut(s) 7
BmgT120I GGNCC 2 cut(s) 7, 98
BmiI GGNNCC 1 cut(s) 21
BmrFI CCNGG 1 cut(s) 24
BmsI GCATC 4 cut(s) 485, 721, 1151, 1364
BpiI GAAGAC 1 cut(s) 85
Bpu14I TTCGAA 1 cut(s) 76
BpuEI CTTGAG 2 cut(s) 49, 1328
BsaBI GATNNNNATC 1 cut(s) 51
BsaJI CCNNGG 4 cut(s) 540, 556, 867, 1641
BsaWI WCCGGW 1 cut(s) 1816
BsaXI ACNNNNNCTCC 4 cut(s) 720, 750, 1481, 1511
Bsc4I CCNNNNNNNGG 2 cut(s) 16, 260
Bse8I GATNNNNATC 1 cut(s) 51
BseBI CCWGG 1 cut(s) 24
BseDI CCNNGG 4 cut(s) 540, 556, 867, 1641
BseGI GGATG 3 cut(s) 1145, 1355, 1478
BseJI GATNNNNATC 1 cut(s) 51
BseLI CCNNNNNNNGG 2 cut(s) 16, 260
BseMII CTCAG 1 cut(s) 1524
BseRI GAGGAG 1 cut(s) 557
BseSI GKGCMC 1 cut(s) 1250
BseX3I CGGCCG 1 cut(s) 870
BseXI GCAGC 3 cut(s) 224, 460, 1656
Bsh1285I CGRYCG 1 cut(s) 873
BshFI GGCC 2 cut(s) 100, 872
BsiEI CGRYCG 1 cut(s) 873
BsiHKAI GWGCWC 1 cut(s) 37
BsiSI CCGG 1 cut(s) 1817
BslFI GGGAC 1 cut(s) 1478
BslI CCNNNNNNNGG 2 cut(s) 16, 260
BsmAI GTCTC 3 cut(s) 880, 1748, 1998
BsmBI CGTCTC 1 cut(s) 880
BsmFI GGGAC 1 cut(s) 1478
BsmI GAATGC 3 cut(s) 489, 1420, 1844
BsnI GGCC 2 cut(s) 100, 872
Bsp119I TTCGAA 1 cut(s) 76
Bsp1286I GDGCHC 2 cut(s) 37, 1250
Bsp143I GATC 9 cut(s) 19, 52, 445, 592, 663, 1399, 1602, 1645, 1894
Bsp19I CCATGG 1 cut(s) 1641
BspACI CCGC 2 cut(s) 692, 1606
BspANI GGCC 2 cut(s) 100, 872
BspCNI CTCAG 1 cut(s) 1525
BspHI TCATGA 3 cut(s) 118, 529, 1002
BspLI GGNNCC 1 cut(s) 21
BspPI GGATC 7 cut(s) 14, 27, 47, 440, 658, 1597, 1653
BspT104I TTCGAA 1 cut(s) 76
BspTI CTTAAG 1 cut(s) 881
BssECI CCNNGG 4 cut(s) 540, 556, 867, 1641
BssMI GATC 9 cut(s) 19, 52, 445, 592, 663, 1399, 1602, 1645, 1894
BssSI CACGAG 1 cut(s) 762
BssT1I CCWWGG 2 cut(s) 556, 1641
Bst2BI CACGAG 1 cut(s) 762
Bst2UI CCWGG 1 cut(s) 24
Bst4CI ACNGT 4 cut(s) 159, 837, 1111, 1921
BstAFI CTTAAG 1 cut(s) 881
BstAPI GCANNNNNTGC 1 cut(s) 1850
BstBI TTCGAA 1 cut(s) 76
BstC8I GCNNGC 3 cut(s) 1438, 1442, 1691
BstDEI CTNAG 3 cut(s) 644, 1500, 1533
BstDSI CCRYGG 2 cut(s) 867, 1641
BstF5I GGATG 3 cut(s) 1145, 1355, 1478
BstKTI GATC 9 cut(s) 22, 55, 448, 595, 666, 1402, 1605, 1648, 1897
BstMAI GTCTC 3 cut(s) 880, 1748, 1998
BstMBI GATC 9 cut(s) 19, 52, 445, 592, 663, 1399, 1602, 1645, 1894
BstMCI CGRYCG 1 cut(s) 873
BstMWI GCNNNNNNNGC 2 cut(s) 1736, 1850
BstNI CCWGG 1 cut(s) 24
BstNSI RCATGY 7 cut(s) 341, 690, 857, 1181, 1440, 1557, 1693
BstSCI CCNGG 1 cut(s) 22
BstSFI CTRYAG 2 cut(s) 1110, 1833
BstSLI GKGCMC 1 cut(s) 1250
BstV1I GCAGC 3 cut(s) 224, 460, 1656
BstV2I GAAGAC 1 cut(s) 85
BstX2I RGATCY 4 cut(s) 19, 445, 663, 1645
BstYI RGATCY 4 cut(s) 19, 445, 663, 1645
BstZI CGGCCG 1 cut(s) 870
BsuI GTATCC 1 cut(s) 781
BsuRI GGCC 2 cut(s) 100, 872
BtgI CCRYGG 2 cut(s) 867, 1641
BtsCI GGATG 3 cut(s) 1145, 1355, 1478
BtsIMutI CAGTG 1 cut(s) 1107
Cac8I GCNNGC 3 cut(s) 1438, 1442, 1691
CaiI CAGNNNCTG 1 cut(s) 1832
CciI TCATGA 3 cut(s) 118, 529, 1002
Cfr13I GGNCC 2 cut(s) 7, 98
Csp6I GTAC 3 cut(s) 1098, 1260, 1621
CviQI GTAC 3 cut(s) 1098, 1260, 1621
DdeI CTNAG 3 cut(s) 644, 1500, 1533
DpnI GATC 9 cut(s) 21, 54, 447, 594, 665, 1401, 1604, 1647, 1896
DpnII GATC 9 cut(s) 19, 52, 445, 592, 663, 1399, 1602, 1645, 1894
DraI TTTAAA 1 cut(s) 1185
EaeI YGGCCR 1 cut(s) 870
EagI CGGCCG 1 cut(s) 870
EciI GGCGGA 1 cut(s) 1595
Ecl136II GAGCTC 1 cut(s) 35
EclXI CGGCCG 1 cut(s) 870
Eco130I CCWWGG 2 cut(s) 556, 1641
Eco24I GRGCYC 1 cut(s) 37
Eco47I GGWCC 1 cut(s) 7
Eco52I CGGCCG 1 cut(s) 870
Eco53kI GAGCTC 1 cut(s) 35
Eco57I CTGAAG 1 cut(s) 1371
EcoICRI GAGCTC 1 cut(s) 35
EcoO109I RGGNCCY 1 cut(s) 98
EcoRI GAATTC 2 cut(s) 462, 1477
EcoRII CCWGG 1 cut(s) 22
EcoT14I CCWWGG 2 cut(s) 556, 1641
EcoT22I ATGCAT 1 cut(s) 688
EcoT38I GRGCYC 1 cut(s) 37
ErhI CCWWGG 2 cut(s) 556, 1641
Esp3I CGTCTC 1 cut(s) 880
FaqI GGGAC 1 cut(s) 1478
FbaI TGATCA 1 cut(s) 1399
Fnu4HI GCNGC 3 cut(s) 238, 474, 1670
FokI GGATG 3 cut(s) 1132, 1342, 1485
FriOI GRGCYC 1 cut(s) 37
Fsp4HI GCNGC 3 cut(s) 238, 474, 1670
FspBI CTAG 4 cut(s) 930, 960, 1658, 1748
GluI GCNGC 3 cut(s) 238, 474, 1670
HaeIII GGCC 2 cut(s) 100, 872
HapII CCGG 1 cut(s) 1817
HincII GTYRAC 1 cut(s) 107
HindII GTYRAC 1 cut(s) 107
HindIII AAGCTT 2 cut(s) 387, 1270
HinfI GANTC 7 cut(s) 218, 495, 536, 545, 758, 1571, 1870
HpaII CCGG 1 cut(s) 1817
HphI GGTGA 3 cut(s) 275, 648, 1138
Hpy166II GTNNAC 5 cut(s) 7, 107, 266, 811, 1340
Hpy188I TCNGA 5 cut(s) 19, 39, 541, 1714, 1983
Hpy8I GTNNAC 5 cut(s) 7, 107, 266, 811, 1340
Hpy99I CGWCG 2 cut(s) 159, 2001
HpyAV CCTTC 1 cut(s) 20
HpyCH4III ACNGT 4 cut(s) 159, 837, 1111, 1921
HpyCH4IV ACGT 1 cut(s) 1240
HpyF10VI GCNNNNNNNGC 2 cut(s) 1736, 1850
HpyF3I CTNAG 3 cut(s) 644, 1500, 1533
HpySE526I ACGT 1 cut(s) 1240
Ksp22I TGATCA 1 cut(s) 1399
Kzo9I GATC 9 cut(s) 19, 52, 445, 592, 663, 1399, 1602, 1645, 1894
LmnI GCTCC 4 cut(s) 40, 637, 781, 1139
LpnPI CCDG 7 cut(s) 9, 36, 180, 258, 648, 1830, 1985
Lsp1109I GCAGC 3 cut(s) 224, 460, 1656
LweI GCATC 4 cut(s) 485, 721, 1151, 1364
MaeI CTAG 4 cut(s) 930, 960, 1658, 1748
MaeII ACGT 1 cut(s) 1240
MaeIII GTNAC 6 cut(s) 551, 560, 933, 962, 1365, 1377
MalI GATC 9 cut(s) 21, 54, 447, 594, 665, 1401, 1604, 1647, 1896
MboI GATC 9 cut(s) 19, 52, 445, 592, 663, 1399, 1602, 1645, 1894
MboII GAAGA 7 cut(s) 90, 325, 445, 1096, 1157, 1629, 1879
MfeI CAATTG 4 cut(s) 307, 891, 1055, 1616
MflI RGATCY 4 cut(s) 19, 445, 663, 1645
MhlI GDGCHC 2 cut(s) 37, 1250
MlyI GAGTC 2 cut(s) 545, 554
MmeI TCCRAC 2 cut(s) 322, 1117
Mph1103I ATGCAT 1 cut(s) 688
MroXI GAANNNNTTC 1 cut(s) 652
MspA1I CMGCKG 1 cut(s) 1669
MspCI CTTAAG 1 cut(s) 881
MspI CCGG 1 cut(s) 1817
MspR9I CCNGG 1 cut(s) 24
MunI CAATTG 4 cut(s) 307, 891, 1055, 1616
Mva1269I GAATGC 3 cut(s) 489, 1420, 1844
MvaI CCWGG 1 cut(s) 24
MwoI GCNNNNNNNGC 2 cut(s) 1736, 1850
NcoI CCATGG 1 cut(s) 1641
NdeII GATC 9 cut(s) 19, 52, 445, 592, 663, 1399, 1602, 1645, 1894
NlaIV GGNNCC 1 cut(s) 21
NmuCI GTSAC 1 cut(s) 1377
NsiI ATGCAT 1 cut(s) 688
NspI RCATGY 7 cut(s) 341, 690, 857, 1181, 1440, 1557, 1693
NspV TTCGAA 1 cut(s) 76
PaeI GCATGC 2 cut(s) 1440, 1693
PagI TCATGA 3 cut(s) 118, 529, 1002
PciI ACATGT 2 cut(s) 337, 853
PctI GAATGC 3 cut(s) 489, 1420, 1844
PdmI GAANNNNTTC 1 cut(s) 652
PfeI GAWTC 5 cut(s) 218, 495, 758, 1571, 1870
PflMI CCANNNNNTGG 1 cut(s) 260
PkrI GCNGC 3 cut(s) 239, 475, 1671
PleI GAGTC 2 cut(s) 544, 553
PpsI GAGTC 2 cut(s) 544, 553
PscI ACATGT 2 cut(s) 337, 853
PshBI ATTAAT 1 cut(s) 705
Psp124BI GAGCTC 1 cut(s) 37
Psp6I CCWGG 1 cut(s) 22
PspGI CCWGG 1 cut(s) 22
PspN4I GGNNCC 1 cut(s) 21
PspPI GGNCC 2 cut(s) 7, 98
PstNI CAGNNNCTG 1 cut(s) 1832
PsuI RGATCY 4 cut(s) 19, 445, 663, 1645
PvuII CAGCTG 1 cut(s) 1669
RsaI GTAC 3 cut(s) 1099, 1261, 1622
RsaNI GTAC 3 cut(s) 1098, 1260, 1621
SacI GAGCTC 1 cut(s) 37
SatI GCNGC 3 cut(s) 238, 474, 1670
Sau3AI GATC 9 cut(s) 19, 52, 445, 592, 663, 1399, 1602, 1645, 1894
Sau96I GGNCC 2 cut(s) 7, 98
SchI GAGTC 2 cut(s) 545, 554
ScrFI CCNGG 1 cut(s) 24
SduI GDGCHC 2 cut(s) 37, 1250
SfaNI GCATC 4 cut(s) 485, 721, 1151, 1364
SfcI CTRYAG 2 cut(s) 1110, 1833
SfuI TTCGAA 1 cut(s) 76
SinI GGWCC 1 cut(s) 7
SmlI CTYRAG 3 cut(s) 28, 881, 1307
SmoI CTYRAG 3 cut(s) 28, 881, 1307
SpeI ACTAGT 1 cut(s) 1747
SphI GCATGC 2 cut(s) 1440, 1693
SsiI CCGC 2 cut(s) 692, 1606
SspI AATATT 3 cut(s) 421, 1132, 1861
SspMI CTAG 4 cut(s) 930, 960, 1658, 1748
SstI GAGCTC 1 cut(s) 37
StyD4I CCNGG 1 cut(s) 22
StyI CCWWGG 2 cut(s) 556, 1641
TaaI ACNGT 4 cut(s) 159, 837, 1111, 1921
TaiI ACGT 1 cut(s) 1243
TaqI TCGA 6 cut(s) 64, 76, 177, 460, 493, 1999
TatI WGTACW 1 cut(s) 1620
TfiI GAWTC 5 cut(s) 218, 495, 758, 1571, 1870
TscAI CASTG 1 cut(s) 1114
TseFI GTSAC 1 cut(s) 1377
TseI GCWGC 3 cut(s) 237, 473, 1669
Tsp45I GTSAC 1 cut(s) 1377
TspRI CASTG 1 cut(s) 1114
Van91I CCANNNNNTGG 1 cut(s) 260
Vha464I CTTAAG 1 cut(s) 881
VpaK11BI GGWCC 1 cut(s) 7
VspI ATTAAT 1 cut(s) 705
XapI RAATTY 7 cut(s) 72, 122, 182, 462, 1423, 1477, 1705
XceI RCATGY 7 cut(s) 341, 690, 857, 1181, 1440, 1557, 1693
XcmI CCANNNNNNNNNTGG 1 cut(s) 1747
XmnI GAANNNNTTC 1 cut(s) 652
XspI CTAG 4 cut(s) 930, 960, 1658, 1748
Zsp2I ATGCAT 1 cut(s) 688
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.