Rw5G041280

Zinc finger MYM-type protein 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000122
Physical Location & Seq
Forward (+)
72679162 .. 72681767
2606 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G041280.1

Sequence Viewer

Length: 1905 bp
ATGGCATACATACAAAAAGGTCCTTGTCAGCCTCGAGACTATAAGTTTCCCAAGAAGACTCTGGCAGGAAACTCAGAAAGACGGTTCAATCCGGCTTGGTTTGATGAATTTCCTACTTGGTTGGAATATAGCATTGAAAAAGATGCTGCCTTTTGTCTCTGTTGTTATCTCTTCAAACCTGATATTGGAGAACAAACAGGCAGTGATGCATTCGTTCGCAAAGGGTTTTCGAATTGGAAGAAGAAAGAAGGTTTACAAGGTCATGTTGGAGGACCTAATAGTTCCCACAACAAAGCTAGGATAAATTTTGAAGCCTTATTAGACCAAAACCAAGCTCGAAGTGATTGTCAAACACTTTTGGGTGCATCAATTGATTGTGTTAAGTTTCTTATGCGACAAGGTCTTCTATTCTGTGGGCATGATGAATATGAAACTTCAAATGACCAAGGAAGTGTTGTTGGACTTTTGAGATTTCTATATGATCATAGTACAGATATAAAAGCTGCTGCATCAAGAAATTCTCCTGAGACTCTGAAGGTGACATCATGTGATATTCAGAAGGACATTGTAAGTGCTATTTCAACTGAAATCGTCAATACAATTACTAGAGATATCAGCAATTCACTATTTTCCATTCTTATTAATGAATTCCTTGACATTTCTTCAATGAATCAAATGGCTATTATATTACGTTTTGTGGACAAGGGTACTGTAATTGAGCGATATTTAGGTATGGTGCATGTTACCAATGCTACTGCTCTCTCCCTCAAGGTGGCTGTTGATGACTTTTTTTCTAGTCATGGATTAATCATGTCTAGGTTGCGGGGACAAACTTACGTTGGGACAAGTAATATGCATTGTGAGTTCAATAGTCTTAAGACACTTATTATGAAGGAGAATAAGTGTGCATTTTATGTTCATAGCTTTACTCATGATCTTCATTCAGTTCTCATAGATGTAGCGAAGAATCACAAAGAAATCATGGGTCTCTTTACTGCAGTTGCTAATGTAGTGAAGGTGGTTGGAACCTTTGTTCAATGTCGTGATACACTTCGGAAGAAACATGGTGTGTTAGTTCTTGAAGCACTTAATACTGGTGAGTTTTTAAGAGGACAAGATGATTTTTCACAAGCATTTCAAAGAAAAGATCAAGATATTCTAAACATCCTGAACTTGGTACAAATATGCAAAAAGCAACTGAAGATGATGAGGGAGAGTTGGCGGCCAAGGCATAAAGCTCAAGTGATCACAAACAAGCATCATTATTGTGTTGAGTTGTTCTACAATGTTATAGATCTGCAACTTCTAGAGTTAAACAATCAATTCACTGAGATGAATACTGAGTTGCTTCTTTGTGTGGCATGTTTAGATCCAAGTGATTCATTCTCTGCTTTTGACAAACTAAAGTTGATTCAACTTGCTCGATATTATCCAAATGACTTTTCCACAACTGACTTTATGATACTTGAAGACCAGCTTGAGAAATACATTTTGGACATGCGTTCCAGCATTGGATTTTCAACCTTGAAAGGAATTTCTGATCTTGCTGAAAAATTGGTTGAGACAGGAAAAGATCAGGTTTACCCATTAGTTTACTTGCTGTTGACATTGTCTCTAATTTTACCAGTTGCAACTCCCAGGGTAGAAAGACTGTTTTCTGCTGTGAATTTGTTGAAGAATCAGTTACACAAGCAAATGGAAGATCAATGGATGAGGGATAGCTTGATTGGATACGTTGAGAAGGACATTCTTGATAGTGTACGGATATGCCACTTGCTAGGTATATCTGAAGGTAATTCCTTGATTAAGTTTATACATTTGGTGTTTGCTTTTCTGAAATTCGTACAAGCCTCTGTAGATTTCAAATGCCATATAAAAGTTGTGAGAACAGAATATAGTCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

634

Amino Acids

72.29

Weight (kDa)

7.01

Isoelectric Point (pI)

30.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 69 - 290 1.8e-48 Domain of unknown function (DUF4371)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19260 AT1G41920 AT1G42710 AT2G06541 AT2G06541 AT3G29450 AT3G29763 AT3G29765 AT3G31402 AT3G31402 AT4G09660
fragaria_vesca FvH4_1g22711 FvH4_3g10612 FvH4_3g23261 FvH4_3g31623 FvH4_3g33391 FvH4_3g37321 FvH4_3g43192 FvH4_3g43193 FvH4_4g00181 FvH4_4g00251 FvH4_4g08751 FvH4_4g15271 FvH4_5g27190 FvH4_6g02122 FvH4_6g26880 FvH4_6g35121 FvH4_7g16871 FvH4_7g19080 FvH4_7g30071
malus_domestica MD02G1162100.v1.1 MD03G1081700.v1.1 MD09G1280500.v1.1 MD12G1083800.v1.1 MD12G1128200.v1.1
prunus_persica Prupe.7G129800_v2.0.a1
pyrus_communis pycom01g08000 pycom02g13840 pycom02g18030 pycom04g01290 pycom04g12580 pycom05g02550 pycom05g06740 pycom05g26200 pycom07g09850 pycom08g10610 pycom10g11280 pycom11g12580 pycom11g22260 pycom12g18440 pycom13g20080 pycom15g25600 pycom16g23600 pycom17g10070
rosa_chinensis RchiOBHm_Chr1g0313551 RchiOBHm_Chr1g0364331 RchiOBHm_Chr1g0369741 RchiOBHm_Chr1g0380371 RchiOBHm_Chr2g0097391 RchiOBHm_Chr2g0113561 RchiOBHm_Chr2g0114151 RchiOBHm_Chr2g0119761 RchiOBHm_Chr2g0149851 RchiOBHm_Chr2g0151931 RchiOBHm_Chr2g0166411 RchiOBHm_Chr3g0453661 RchiOBHm_Chr3g0466101 RchiOBHm_Chr3g0477911 RchiOBHm_Chr3g0486441 RchiOBHm_Chr4g0390161 RchiOBHm_Chr4g0392191 RchiOBHm_Chr4g0414461 RchiOBHm_Chr4g0421421 RchiOBHm_Chr5g0023801 RchiOBHm_Chr5g0040121 RchiOBHm_Chr5g0045381 RchiOBHm_Chr5g0061511 RchiOBHm_Chr5g0062621 RchiOBHm_Chr5g0064161 RchiOBHm_Chr5g0068711 RchiOBHm_Chr6g0246041 RchiOBHm_Chr6g0252511 RchiOBHm_Chr6g0252521 RchiOBHm_Chr6g0263361 RchiOBHm_Chr6g0269451 RchiOBHm_Chr6g0275351 RchiOBHm_Chr6g0288481 RchiOBHm_Chr6g0310011 RchiOBHm_Chr6g0310021 RchiOBHm_Chr7g0223071 RchiOBHm_Chr7g0227621 RchiOBHm_Chr7g0242581
rosa_laevigata RLG00000033957
rosa_multiflora Rmu_co8455865.1_g000001 Rmu_sc0000021.1_g000011 Rmu_sc0000079.1_g000049 Rmu_sc0000087.1_g000015 Rmu_sc0000151.1_g000008 Rmu_sc0000365.1_g000014 Rmu_sc0000446.1_g000054 Rmu_sc0000446.1_g000055 Rmu_sc0000534.1_g000006 Rmu_sc0000724.1_g000020 Rmu_sc0000859.1_g000001 Rmu_sc0000876.1_g000002 Rmu_sc0000881.1_g000005 Rmu_sc0000929.1_g000014 Rmu_sc0001112.1_g000004 Rmu_sc0001136.1_g000009 Rmu_sc0001353.1_g000064 Rmu_sc0001662.1_g000005 Rmu_sc0001764.1_g000006 Rmu_sc0001982.1_g000015 Rmu_sc0002052.1_g000008 Rmu_sc0002052.1_g000009 Rmu_sc0002158.1_g000011 Rmu_sc0002285.1_g000005 Rmu_sc0002983.1_g000025 Rmu_sc0003063.1_g000006 Rmu_sc0003076.1_g000005 Rmu_sc0003221.1_g000053 Rmu_sc0003382.1_g000010 Rmu_sc0003733.1_g000054 Rmu_sc0003997.1_g000005 Rmu_sc0004283.1_g000008 Rmu_sc0004283.1_g000053 Rmu_sc0004509.1_g000007 Rmu_sc0004540.1_g000028 Rmu_sc0004657.1_g000005 Rmu_sc0004935.1_g000006 Rmu_sc0005072.1_g000003 Rmu_sc0005248.1_g000001 Rmu_sc0006161.1_g000001 Rmu_sc0006209.1_g000005 Rmu_sc0006576.1_g000018 Rmu_sc0006576.1_g000019 Rmu_sc0007121.1_g000016 Rmu_sc0007121.1_g000032 Rmu_sc0007753.1_g000016 Rmu_sc0007795.1_g000009 Rmu_sc0007841.1_g000019 Rmu_sc0008339.1_g000021 Rmu_sc0008339.1_g000022 Rmu_sc0008432.1_g000001 Rmu_sc0008633.1_g000009 Rmu_sc0009104.1_g000013 Rmu_sc0011469.1_g000001 Rmu_sc0012039.1_g000001 Rmu_sc0013947.1_g000007 Rmu_sc0015560.1_g000001 Rmu_sc0017369.1_g000001 Rmu_sc0021648.1_g000001 Rmu_sc0022867.1_g000003 Rmu_sc0027801.1_g000001 Rmu_sc0027801.1_g000002 Rmu_sc0029861.1_g000001 Rmu_sc0030314.1_g000001 Rmu_sc0040149.1_g000001 Rmu_ssc0000089.1_g000028 Rmu_ssc0000480.1_g000033
rosa_roxburghii Rroxscaffold_1G00002540 Rroxscaffold_1G00013960 Rroxscaffold_1G00041160 Rroxscaffold_1G00045580 Rroxscaffold_3G00247310 Rroxscaffold_3G00267070 Rroxscaffold_4G00313830 Rroxscaffold_5G00372270 Rroxscaffold_6G00404800 Rroxscaffold_6G00406090
rosa_rugosa Rorug03G0269800 Rorug04G0142900 Rorug04G0152600 Rorug05G0223300.1 Rorug05G0266400 Rorug06G0008900 Rorug07G0086000 Rorug07G0205800 Rorug07G0270900
rosa_wichuraiana Rw0G001600 Rw0G017220 Rw0G017620 Rw0G018380 Rw1G002320 Rw1G020940 Rw1G021200 Rw1G022610 Rw1G038680 Rw2G013320 Rw2G016850 Rw2G024020 Rw2G025210 Rw2G032270 Rw2G039490 Rw2G041630 Rw2G048450 Rw2G051510 Rw3G025320 Rw4G003260 Rw4G007300 Rw4G009290 Rw4G010910 Rw4G013260 Rw5G008190 Rw5G008290 Rw5G018740 Rw5G023640 Rw5G028800 Rw5G031830 Rw5G041280 Rw5G044050 Rw6G007060 Rw6G008230 Rw6G009960 Rw6G013460 Rw6G014610 Rw6G017780 Rw6G033200 Rw7G021340 Rw7G023750 Rw7G032290 Rw7G032450 Rw7G033880 Rw7G038580 Rw7G040180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 823, 1222
AclWI GGATC 1 cut(s) 1364
AcoI YGGCCR 1 cut(s) 1223
AcsI RAATTY 7 cut(s) 107, 304, 517, 647, 1533, 1666, 1838
AcuI CTGAAG 3 cut(s) 554, 1220, 1809
AfaI GTAC 5 cut(s) 490, 709, 1179, 1761, 1845
AfiI CCNNNNNNNGG 3 cut(s) 185, 772, 1174
AflII CTTAAG 1 cut(s) 875
AjnI CCWGG 1 cut(s) 1637
AjuI GAANNNNNNNTTGG 4 cut(s) 1426, 1458, 1475, 1507
AloI GAACNNNNNNTCC 2 cut(s) 1017, 1049
AluBI AGCT 7 cut(s) 296, 335, 503, 924, 1238, 1477, 1722
AluI AGCT 7 cut(s) 296, 335, 503, 924, 1238, 1477, 1722
Alw26I GTCTC 6 cut(s) 30, 161, 521, 992, 1556, 1617
AlwI GGATC 1 cut(s) 1364
Ama87I CYCGRG 1 cut(s) 33
AoxI GGCC 1 cut(s) 1223
ApeKI GCWGC 3 cut(s) 146, 503, 506
ApoI RAATTY 7 cut(s) 107, 304, 517, 647, 1533, 1666, 1838
ArsI GACNNNNNNTTYG 2 cut(s) 331, 363
AseI ATTAAT 2 cut(s) 642, 806
AspS9I GGNCC 2 cut(s) 20, 272
AsuHPI GGTGA 2 cut(s) 550, 1109
AsuII TTCGAA 1 cut(s) 230
AvaI CYCGRG 1 cut(s) 33
AvaII GGWCC 2 cut(s) 20, 272
BbsI GAAGAC 3 cut(s) 62, 395, 1476
BbvI GCAGC 3 cut(s) 133, 490, 493
BciT130I CCWGG 1 cut(s) 1639
BciVI GTATCC 1 cut(s) 1724
BclI TGATCA 2 cut(s) 481, 1245
BcoDI GTCTC 6 cut(s) 30, 161, 521, 992, 1556, 1617
BfaI CTAG 6 cut(s) 297, 606, 795, 816, 1307, 1778
BfmI CTRYAG 2 cut(s) 996, 1854
BfrI CTTAAG 1 cut(s) 875
BfuI GTATCC 1 cut(s) 1724
BglII AGATCT 1 cut(s) 1294
BisI GCNGC 4 cut(s) 147, 504, 507, 1223
BlsI GCNGC 4 cut(s) 148, 505, 508, 1224
Bme1390I CCNGG 1 cut(s) 1639
Bme18I GGWCC 2 cut(s) 20, 272
BmeT110I CYCGRG 1 cut(s) 33
BmgT120I GGNCC 2 cut(s) 20, 272
BmiI GGNNCC 1 cut(s) 1027
BmrFI CCNGG 1 cut(s) 1639
BmsI GCATC 5 cut(s) 133, 196, 374, 518, 1267
BpiI GAAGAC 3 cut(s) 62, 395, 1476
Bpu14I TTCGAA 1 cut(s) 230
BpuEI CTTGAG 3 cut(s) 752, 1224, 1499
BsaI GGTCTC 1 cut(s) 992
BsaJI CCNNGG 4 cut(s) 445, 1226, 1637, 1638
BsaXI ACNNNNNCTCC 2 cut(s) 887, 917
Bsc4I CCNNNNNNNGG 3 cut(s) 185, 772, 1174
Bse1I ACTGG 2 cut(s) 1099, 1625
BseBI CCWGG 1 cut(s) 1639
BseDI CCNNGG 4 cut(s) 445, 1226, 1637, 1638
BseGI GGATG 2 cut(s) 1164, 1716
BseLI CCNNNNNNNGG 3 cut(s) 185, 772, 1174
BseMII CTCAG 4 cut(s) 87, 516, 1320, 1332
BseNI ACTGG 2 cut(s) 1099, 1625
BseXI GCAGC 3 cut(s) 133, 490, 493
BshFI GGCC 1 cut(s) 1225
BsiHKCI CYCGRG 1 cut(s) 33
BsiSI CCGG 1 cut(s) 92
BslFI GGGAC 2 cut(s) 840, 856
BslI CCNNNNNNNGG 3 cut(s) 185, 772, 1174
BsmAI GTCTC 6 cut(s) 30, 161, 521, 992, 1556, 1617
BsmFI GGGAC 2 cut(s) 840, 856
BsmI GAATGC 1 cut(s) 209
BsnI GGCC 1 cut(s) 1225
Bso31I GGTCTC 1 cut(s) 992
BsoBI CYCGRG 1 cut(s) 33
Bsp119I TTCGAA 1 cut(s) 230
Bsp143I GATC 9 cut(s) 481, 934, 1147, 1245, 1294, 1369, 1540, 1573, 1702
BspACI CCGC 2 cut(s) 823, 1222
BspANI GGCC 1 cut(s) 1225
BspCNI CTCAG 4 cut(s) 86, 517, 1321, 1333
BspHI TCATGA 1 cut(s) 931
BspLI GGNNCC 1 cut(s) 1027
BspMAI CTGCAG 1 cut(s) 1000
BspPI GGATC 1 cut(s) 1364
BspT104I TTCGAA 1 cut(s) 230
BspTI CTTAAG 1 cut(s) 875
BspTNI GGTCTC 1 cut(s) 992
BsrI ACTGG 2 cut(s) 1099, 1625
BssECI CCNNGG 4 cut(s) 445, 1226, 1637, 1638
BssMI GATC 9 cut(s) 481, 934, 1147, 1245, 1294, 1369, 1540, 1573, 1702
BssT1I CCWWGG 2 cut(s) 445, 1226
Bst2UI CCWGG 1 cut(s) 1639
Bst4CI ACNGT 3 cut(s) 84, 712, 1653
Bst6I CTCTTC 1 cut(s) 176
BstAFI CTTAAG 1 cut(s) 875
BstBI TTCGAA 1 cut(s) 230
BstDEI CTNAG 4 cut(s) 73, 525, 1329, 1341
BstF5I GGATG 2 cut(s) 1164, 1716
BstKTI GATC 9 cut(s) 484, 937, 1150, 1248, 1297, 1372, 1543, 1576, 1705
BstMAI GTCTC 6 cut(s) 30, 161, 521, 992, 1556, 1617
BstMBI GATC 9 cut(s) 481, 934, 1147, 1245, 1294, 1369, 1540, 1573, 1702
BstMWI GCNNNNNNNGC 1 cut(s) 1228
BstNI CCWGG 1 cut(s) 1639
BstNSI RCATGY 3 cut(s) 743, 1365, 1501
BstSCI CCNGG 1 cut(s) 1637
BstSFI CTRYAG 2 cut(s) 996, 1854
BstV1I GCAGC 3 cut(s) 133, 490, 493
BstV2I GAAGAC 3 cut(s) 62, 395, 1476
BstX2I RGATCY 2 cut(s) 1294, 1369
BstYI RGATCY 2 cut(s) 1294, 1369
BsuI GTATCC 1 cut(s) 1724
BsuRI GGCC 1 cut(s) 1225
BtsCI GGATG 2 cut(s) 1164, 1716
BtsI GCAGTG 1 cut(s) 208
BtsIMutI CAGTG 2 cut(s) 208, 1326
CciI TCATGA 1 cut(s) 931
Cfr13I GGNCC 2 cut(s) 20, 272
Csp6I GTAC 5 cut(s) 489, 708, 1178, 1760, 1844
CviQI GTAC 5 cut(s) 489, 708, 1178, 1760, 1844
DdeI CTNAG 4 cut(s) 73, 525, 1329, 1341
DpnI GATC 9 cut(s) 483, 936, 1149, 1247, 1296, 1371, 1542, 1575, 1704
DpnII GATC 9 cut(s) 481, 934, 1147, 1245, 1294, 1369, 1540, 1573, 1702
EaeI YGGCCR 1 cut(s) 1223
Eam1104I CTCTTC 1 cut(s) 176
EarI CTCTTC 1 cut(s) 176
Eco130I CCWWGG 2 cut(s) 445, 1226
Eco31I GGTCTC 1 cut(s) 992
Eco32I GATATC 1 cut(s) 613
Eco47I GGWCC 2 cut(s) 20, 272
Eco57I CTGAAG 3 cut(s) 554, 1220, 1809
Eco88I CYCGRG 1 cut(s) 33
EcoO109I RGGNCCY 2 cut(s) 20, 272
EcoRI GAATTC 1 cut(s) 647
EcoRII CCWGG 1 cut(s) 1637
EcoRV GATATC 1 cut(s) 613
EcoT14I CCWWGG 2 cut(s) 445, 1226
EcoT22I ATGCAT 2 cut(s) 211, 858
ErhI CCWWGG 2 cut(s) 445, 1226
FalI AAGNNNNNCTT 2 cut(s) 1461, 1493
FaqI GGGAC 2 cut(s) 840, 856
FauI CCCGC 1 cut(s) 816
FbaI TGATCA 2 cut(s) 481, 1245
Fnu4HI GCNGC 4 cut(s) 147, 504, 507, 1223
FokI GGATG 2 cut(s) 1151, 1723
Fsp4HI GCNGC 4 cut(s) 147, 504, 507, 1223
FspBI CTAG 6 cut(s) 297, 606, 795, 816, 1307, 1778
GluI GCNGC 4 cut(s) 147, 504, 507, 1223
HaeIII GGCC 1 cut(s) 1225
HapII CCGG 1 cut(s) 92
HincII GTYRAC 1 cut(s) 1605
HindII GTYRAC 1 cut(s) 1605
HinfI GANTC 7 cut(s) 58, 529, 670, 967, 1379, 1411, 1678
HpaII CCGG 1 cut(s) 92
HphI GGTGA 2 cut(s) 550, 1109
Hpy166II GTNNAC 6 cut(s) 254, 700, 1582, 1594, 1605, 1760
Hpy188I TCNGA 8 cut(s) 76, 534, 558, 1056, 1540, 1789, 1836, 1904
Hpy8I GTNNAC 6 cut(s) 254, 700, 1582, 1594, 1605, 1760
HpyAV CCTTC 7 cut(s) 242, 529, 553, 886, 1009, 1735, 1784
HpyCH4III ACNGT 3 cut(s) 84, 712, 1653
HpyCH4IV ACGT 3 cut(s) 691, 837, 1734
HpyF10VI GCNNNNNNNGC 1 cut(s) 1228
HpyF3I CTNAG 4 cut(s) 73, 525, 1329, 1341
HpySE526I ACGT 3 cut(s) 691, 837, 1734
Ksp22I TGATCA 2 cut(s) 481, 1245
Kzo9I GATC 9 cut(s) 481, 934, 1147, 1245, 1294, 1369, 1540, 1573, 1702
Lsp1109I GCAGC 3 cut(s) 133, 490, 493
LweI GCATC 5 cut(s) 133, 196, 374, 518, 1267
MaeI CTAG 6 cut(s) 297, 606, 795, 816, 1307, 1778
MaeII ACGT 3 cut(s) 691, 837, 1734
MaeIII GTNAC 3 cut(s) 538, 742, 1683
MalI GATC 9 cut(s) 483, 936, 1149, 1247, 1296, 1371, 1542, 1575, 1704
MboI GATC 9 cut(s) 481, 934, 1147, 1245, 1294, 1369, 1540, 1573, 1702
MfeI CAATTG 1 cut(s) 369
MflI RGATCY 2 cut(s) 1294, 1369
MlyI GAGTC 2 cut(s) 52, 523
MmeI TCCRAC 4 cut(s) 102, 247, 439, 1003
MnlI CCTC 7 cut(s) 42, 263, 776, 1103, 1203, 1707, 1861
Mph1103I ATGCAT 2 cut(s) 211, 858
MseI TTAA 8 cut(s) 381, 642, 806, 876, 1089, 1106, 1313, 1806
MslI CAYNNNNRTG 2 cut(s) 1266, 1331
MspCI CTTAAG 1 cut(s) 875
MspI CCGG 1 cut(s) 92
MspR9I CCNGG 1 cut(s) 1639
MunI CAATTG 1 cut(s) 369
Mva1269I GAATGC 1 cut(s) 209
MvaI CCWGG 1 cut(s) 1639
MwoI GCNNNNNNNGC 1 cut(s) 1228
NdeII GATC 9 cut(s) 481, 934, 1147, 1245, 1294, 1369, 1540, 1573, 1702
NlaIV GGNNCC 1 cut(s) 1027
NmuCI GTSAC 1 cut(s) 538
NsiI ATGCAT 2 cut(s) 211, 858
NspI RCATGY 3 cut(s) 743, 1365, 1501
NspV TTCGAA 1 cut(s) 230
PaeR7I CTCGAG 1 cut(s) 33
PagI TCATGA 1 cut(s) 931
PasI CCCWGGG 1 cut(s) 1638
PctI GAATGC 1 cut(s) 209
PfeI GAWTC 5 cut(s) 670, 967, 1379, 1411, 1678
PflFI GACNNNGTC 2 cut(s) 399, 1609
PkrI GCNGC 4 cut(s) 148, 505, 508, 1224
PleI GAGTC 2 cut(s) 52, 523
PpsI GAGTC 2 cut(s) 52, 523
PpuMI RGGWCCY 2 cut(s) 20, 272
PshBI ATTAAT 2 cut(s) 642, 806
Psp5II RGGWCCY 2 cut(s) 20, 272
Psp6I CCWGG 1 cut(s) 1637
PspGI CCWGG 1 cut(s) 1637
PspN4I GGNNCC 1 cut(s) 1027
PspPI GGNCC 2 cut(s) 20, 272
PspPPI RGGWCCY 2 cut(s) 20, 272
PstI CTGCAG 1 cut(s) 1000
PsuI RGATCY 2 cut(s) 1294, 1369
PsyI GACNNNGTC 2 cut(s) 399, 1609
RsaI GTAC 5 cut(s) 490, 709, 1179, 1761, 1845
RsaNI GTAC 5 cut(s) 489, 708, 1178, 1760, 1844
RseI CAYNNNNRTG 2 cut(s) 1266, 1331
SaqAI TTAA 8 cut(s) 381, 642, 806, 876, 1089, 1106, 1313, 1806
SatI GCNGC 4 cut(s) 147, 504, 507, 1223
Sau3AI GATC 9 cut(s) 481, 934, 1147, 1245, 1294, 1369, 1540, 1573, 1702
Sau96I GGNCC 2 cut(s) 20, 272
SchI GAGTC 2 cut(s) 52, 523
ScrFI CCNGG 1 cut(s) 1639
SfaNI GCATC 5 cut(s) 133, 196, 374, 518, 1267
SfcI CTRYAG 2 cut(s) 996, 1854
Sfr274I CTCGAG 1 cut(s) 33
SfuI TTCGAA 1 cut(s) 230
SinI GGWCC 2 cut(s) 20, 272
SlaI CTCGAG 1 cut(s) 33
SmiMI CAYNNNNRTG 2 cut(s) 1266, 1331
SmlI CTYRAG 5 cut(s) 33, 767, 875, 1239, 1478
SmoI CTYRAG 5 cut(s) 33, 767, 875, 1239, 1478
SsiI CCGC 2 cut(s) 823, 1222
SspMI CTAG 6 cut(s) 297, 606, 795, 816, 1307, 1778
StyD4I CCNGG 1 cut(s) 1637
StyI CCWWGG 2 cut(s) 445, 1226
TaaI ACNGT 3 cut(s) 84, 712, 1653
TaiI ACGT 3 cut(s) 694, 840, 1737
TaqI TCGA 4 cut(s) 34, 230, 337, 1423
TatI WGTACW 1 cut(s) 488
TauI GCSGC 1 cut(s) 1225
TfiI GAWTC 5 cut(s) 670, 967, 1379, 1411, 1678
Tru1I TTAA 8 cut(s) 381, 642, 806, 876, 1089, 1106, 1313, 1806
Tru9I TTAA 8 cut(s) 381, 642, 806, 876, 1089, 1106, 1313, 1806
TscAI CASTG 2 cut(s) 208, 1333
TseFI GTSAC 1 cut(s) 538
TseI GCWGC 3 cut(s) 146, 503, 506
Tsp45I GTSAC 1 cut(s) 538
TspGWI ACGGA 1 cut(s) 1777
TspRI CASTG 2 cut(s) 208, 1333
Tth111I GACNNNGTC 2 cut(s) 399, 1609
Vha464I CTTAAG 1 cut(s) 875
VpaK11BI GGWCC 2 cut(s) 20, 272
VspI ATTAAT 2 cut(s) 642, 806
XapI RAATTY 7 cut(s) 107, 304, 517, 647, 1533, 1666, 1838
XbaI TCTAGA 1 cut(s) 1306
XceI RCATGY 3 cut(s) 743, 1365, 1501
XcmI CCANNNNNNNNNTGG 1 cut(s) 58
XhoI CTCGAG 1 cut(s) 33
XspI CTAG 6 cut(s) 297, 606, 795, 816, 1307, 1778
Zsp2I ATGCAT 2 cut(s) 211, 858
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.