AT3G47580
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
17532612 .. 17536059
3448 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G47580.1

Sequence Viewer

Length: 3036 bp
ATGAAACTATTTCTTTTACTTTCTTTCAGTGCTCATTTGTTACTGGGAGCAGATGGGTTTACCGATGAAACTGATAGGCAAGCATTGTTGGAGTTCAAGTCTCAAGTTTCTGAAGGCAAAAGAGATGTCTTATCCTCATGGAATAACTCATTCCCTCTATGCAACTGGAAGTGGGTTACATGTGGTCGTAAACACAAGAGAGTTACTCATTTGAACCTCGGGGGATTACAGTTGGGCGGGATAGTATCACCATCTATCGGTAATGTATCGTTTCTCATATCACTTGATCTGTCTGATAACGCTTTTGGGGGTATCATCCCTCGAGAGGTGGGAAACTTGTTTAGACTTGAACACTTGTATATGGCCTTCAATTCTCTAGAGGGAGGGATTCCAGCCACTCTATCTAACTGCTCTAGATTGTTGAACCTTGATTTATATTCAAATCCTCTTAGACAAGGTGTTCCTTCTGAACTAGGGTCATTGACGAAACTCGTTATTTTAGATCTTGGTCGAAACAACCTGAAAGGCAAGCTCCCTAGATCTCTAGGAAACTTGACCTCTTTAAAATCGCTTGGCTTCACAGATAACAATATAGAAGGAGAAGTTCCAGATGAATTAGCTAGACTGAGTCAAATGGTGGGTCTTGGGTTATCAATGAACAAATTCTTTGGCGTTTTTCCTCCCGCCATCTACAATTTGTCCGCACTTGAGGACTTATTCCTCTTTGGTAGTGGCTTCTCGGGTAGCCTAAAGCCTGATTTTGGTAATCTGCTACCAAACATTCGTGAGTTAAATCTGGGAGAAAATGATCTAGTGGGAGCCATTCCAACAACACTTTCCAATATTTCAACTCTACAAAAGTTTGGAATCAACAAAAACATGATGACAGGAGGTATATATCCGAACTTTGGAAAAGTACCGAGTTTGCAATACCTAGATCTTAGTGAGAATCCTCTAGGAAGTTACACTTTTGGAGATCTTGAATTTATTGATTCTTTGACTAATTGCACCCATTTGCAACTCTTAAGTGTTGGTTACACTAGGCTTGGGGGTGCCTTGCCTACATCCATTGCCAATATGTCCACAGAACTCATCAGTTTAAACCTTATAGGAAACCACTTTTTTGGAAGCATTCCTCAAGATATTGGGAATCTCATAGGCCTACAAAGACTTCAGTTGGGAAAAAATATGTTGACCGGACCACTCCCAACTTCTTTGGGAAAGCTTCTAAGATTGGGGTTATTAAGTCTATATTCAAATAGGATGTCAGGAGAGATTCCATCTTTTATAGGCAACCTAACTCAATTAGAAATACTATATTTGTCCAACAATAGTTTTGAGGGAATTGTTCCTCCGAGTCTCGGGAAGTGTAGTCACATGCTTGATTTACGCATTGGGTATAACAAGTTGAATGGGACTATACCGAAGGAAATTATGCAAATCCCAACCCTTGTTAACCTAAGCATGGAAGGTAACTCTTTGAGCGGCTCTCTACCAAATGATATTGGAAGTCTACAAAATCTTGTAAAACTATCACTTGAGAACAATAAGTTTTCAGGACATCTCCCACAAACCTTGGGAAATTGTCTCGCGATGGAACAACTTTTTCTACAAGGAAATTCTTTTGATGGAGCAATTCCAAATATAAGAGGGTTGATGGGTGTAAGAAGAGTTGATTTGTCAAACAATGATCTATCGGGAAGTATACCTGAATATTTTGCAAACTTCTCCAAGTTGGAATATCTCAATCTATCTATTAACAATTTTACGGGAAAGGTGCCTTCCAAAGGAAATTTTCAGAACTCTACAATAGTTTTTGTATTTGGAAACAAAAACCTATGTGGAGGCATCAAGGATCTGAAACTAAAGCCATGCCTCGCCCAAGAACCACCAGTGGAGACAAAGCATTCCTCTCATTTAAAGAAAGTTGCAATTTTAGTAAGCATAGGCATAGCTTTGCTATTGCTGTTGGTCATAGCTTCGATGGTTCTGTGTTGGTTCAGAAAAAGAAGGAAGAACCAGCAGACAAATAACCTGGTTCCTTCTAAGTTGGAGATTTTCCATGAGAAGATAAGCTATGGAGATCTACGAAATGCGACAAATGGCTTCTCTTCAAGCAATATGGTTGGGTCAGGTAGTTTTGGTACTGTGTTCAAGGCATTGCTCCCGACGGAGAGCAAGATTGTTGCAGTGAAAGTTCTAAACATGCAGAGACGTGGAGCTATGAAGAGCTTTATGGCAGAATGTGAATCCTTGAAAGACACAAGGCATCGTAATCTTGTGAAATTACTGACAGCTTGCGCTAGTACTGATTTCCAAGGAAACGAATTCAGAGCGCTTATCTATGAGTACTTGCCGAATGGAAGCGTGGATATGTGGCTGCACCCAGAGGAAGTCGAAGAGATACGTAGGCCCCCACGAACCTTGACACTTCTTGAAAGGCTTAATATTGTCATAGACGTGGCTTCTGTTTTGGACTATCTTCATGTTCACTGTCATGAGCCTATAGCTCATTGCGATCTCAAGCCAAGCAACGTCCTTCTAGAAGATGATTTGACCGCCCATGTTAGTGATTTTGGTCTGGCTCGGCTTCTACTCAAATTCGACAAGGAGTCATTCCTTAACCAACTAAGCTCAGCCGGAGTTAGAGGAACCATCGGCTATGCCGCACCAGAATATGGAATGGGAGGACAACCATCAATACATGGTGATGTGTATAGCTTTGGGGTTCTCCTTTTAGAAATGTTCACCGGGAAACGACCAACTGATGAGTTATTTGGGGGAAATTTAACACTACATAGCTACACCAAGTTAGCGTTGCCAGAAAAAGTATTCGAAATTGCAGACAAAGCGATTCTTCACATTGGTCTTAGAGTTGGTTTCCGTACTGCTGAGTGCTTGACACTGGTTTTGGAGGTGGGACTTAGGTGCTGTGAAGAATATCCTACGAACCGGTTGGCAACGAGTGAAGTCGCAAAAGAGTTGATCTCAATCAGAGAAAGGTTCTTTAAAACCAGAAGAACACCTAGACGTTGA

Protein Analysis

1011

Amino Acids

111.25

Weight (kDa)

8.41

Isoelectric Point (pI)

33.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 23 - 61 8.8e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 84 - 336 1.1e-12 Leucine-rich repeat region
LRR_14 PF23598 362 - 444 6.5e-07 Leucine-rich repeat region
LRR_8 PF13855 435 - 494 3.1e-06 Leucine rich repeat
Pkinase PF00069 705 - 937 1.6e-34 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 706 - 935 8.5e-35 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1052, 1777
AccB7I CCANNNNNTGG 1 cut(s) 2678
AccBSI CCGCTC 1 cut(s) 1485
AccI GTMKAC 2 cut(s) 1513, 1705
AccII CGCG 1 cut(s) 1592
AciI CCGC 6 cut(s) 237, 684, 702, 1485, 2559, 2667
AclWI GGATC 1 cut(s) 1863
AcsI RAATTY 7 cut(s) 662, 983, 1618, 1792, 2327, 2600, 2785
AcuI CTGAAG 2 cut(s) 132, 1157
AfaI GTAC 5 cut(s) 918, 2146, 2308, 2351, 2887
AfeI AGCGCT 1 cut(s) 2337
AfiI CCNNNNNNNGG 8 cut(s) 257, 325, 761, 908, 1361, 1465, 1787, 2678
AflII CTTAAG 1 cut(s) 1024
AflIII ACRYGT 1 cut(s) 179
AgeI ACCGGT 1 cut(s) 2952
AhdI GACNNNNNGTC 1 cut(s) 2611
AjiI CACGTC 2 cut(s) 2216, 2461
AjnI CCWGG 1 cut(s) 2034
AjuI GAANNNNNNNTTGG 2 cut(s) 820, 852
Alw21I GWGCWC 1 cut(s) 34
Alw26I GTCTC 5 cut(s) 105, 1364, 1592, 1892, 2206
AlwI GGATC 1 cut(s) 1863
Ama87I CYCGRG 4 cut(s) 218, 321, 739, 1361
Aor51HI AGCGCT 1 cut(s) 2337
AoxI GGCC 3 cut(s) 363, 1159, 2411
ApeKI GCWGC 1 cut(s) 2380
ApoI RAATTY 7 cut(s) 662, 983, 1618, 1792, 2327, 2600, 2785
ArsI GACNNNNNNTTYG 8 cut(s) 111, 143, 625, 657, 1250, 1282, 2893, 2925
AsiGI ACCGGT 1 cut(s) 2952
Asp700I GAANNNNTTC 1 cut(s) 662
AspLEI GCGC 2 cut(s) 2303, 2338
AspS9I GGNCC 2 cut(s) 1199, 2412
AsuC2I CCSGG 1 cut(s) 2752
AsuHPI GGTGA 3 cut(s) 240, 2720, 2740
AsuII TTCGAA 1 cut(s) 2835
AvaI CYCGRG 4 cut(s) 218, 321, 739, 1361
AvaII GGWCC 1 cut(s) 1199
BanI GGYRCC 2 cut(s) 1052, 1777
BarI GAAGNNNNNNTAC 2 cut(s) 350, 382
Bbv12I GWGCWC 1 cut(s) 34
BbvI GCAGC 1 cut(s) 2367
BciT130I CCWGG 1 cut(s) 2036
BcnI CCSGG 1 cut(s) 2752
BcoDI GTCTC 5 cut(s) 105, 1364, 1592, 1892, 2206
BfmI CTRYAG 1 cut(s) 2505
BfoI RGCGCY 1 cut(s) 2339
BfrI CTTAAG 1 cut(s) 1024
BglII AGATCT 5 cut(s) 502, 539, 937, 976, 2083
BisI GCNGC 3 cut(s) 1486, 2381, 2667
BlpI GCTNAGC 1 cut(s) 2635
BlsI GCNGC 3 cut(s) 1487, 2382, 2668
BmcAI AGTACT 2 cut(s) 2308, 2351
Bme1390I CCNGG 2 cut(s) 2036, 2752
Bme18I GGWCC 1 cut(s) 1199
BmeRI GACNNNNNGTC 1 cut(s) 2611
BmeT110I CYCGRG 4 cut(s) 218, 321, 739, 1361
BmgBI CACGTC 2 cut(s) 2216, 2461
BmgT120I GGNCC 2 cut(s) 1199, 2412
BmiI GGNNCC 6 cut(s) 820, 1054, 1779, 2040, 2414, 2653
BmrFI CCNGG 2 cut(s) 2036, 2752
BmrI ACTGGG 1 cut(s) 53
BmsI GCATC 2 cut(s) 1857, 2278
BmuI ACTGGG 1 cut(s) 53
BplI GAGNNNNNCTC 6 cut(s) 190, 222, 1474, 1506, 2972, 3004
Bpu10I CCTNAGC 1 cut(s) 1460
Bpu1102I GCTNAGC 1 cut(s) 2635
Bpu14I TTCGAA 1 cut(s) 2835
BpuEI CTTGAG 5 cut(s) 87, 728, 1122, 1559, 2507
BpuMI CCSGG 1 cut(s) 2752
BsaAI YACGTR 1 cut(s) 2408
BsaBI GATNNNNATC 1 cut(s) 2990
BsaJI CCNNGG 3 cut(s) 217, 1575, 2317
BsaWI WCCGGW 2 cut(s) 1196, 2952
BsaXI ACNNNNNCTCC 2 cut(s) 83, 113
Bsc4I CCNNNNNNNGG 8 cut(s) 257, 325, 761, 908, 1361, 1465, 1787, 2678
Bse118I RCCGGY 1 cut(s) 2952
Bse1I ACTGG 4 cut(s) 48, 170, 1892, 2910
Bse3DI GCAATG 3 cut(s) 1068, 2159, 2512
Bse8I GATNNNNATC 1 cut(s) 2990
BseBI CCWGG 1 cut(s) 2036
BseDI CCNNGG 3 cut(s) 217, 1575, 2317
BseGI GGATG 3 cut(s) 315, 1064, 1269
BseJI GATNNNNATC 1 cut(s) 2990
BseLI CCNNNNNNNGG 8 cut(s) 257, 325, 761, 908, 1361, 1465, 1787, 2678
BseMI GCAATG 3 cut(s) 1068, 2159, 2512
BseMII CTCAG 3 cut(s) 617, 2649, 2883
BseNI ACTGG 4 cut(s) 48, 170, 1892, 2910
BseXI GCAGC 1 cut(s) 2367
BsgI GTGCAG 1 cut(s) 2366
Bsh1236I CGCG 1 cut(s) 1592
BshFI GGCC 3 cut(s) 365, 1161, 2413
BshNI GGYRCC 2 cut(s) 1052, 1777
BshTI ACCGGT 1 cut(s) 2952
BsiHKAI GWGCWC 1 cut(s) 34
BsiHKCI CYCGRG 4 cut(s) 218, 321, 739, 1361
BsiSI CCGG 4 cut(s) 1197, 2640, 2751, 2953
BslFI GGGAC 2 cut(s) 1429, 2934
BslI CCNNNNNNNGG 8 cut(s) 257, 325, 761, 908, 1361, 1465, 1787, 2678
BsmAI GTCTC 5 cut(s) 105, 1364, 1592, 1892, 2206
BsmBI CGTCTC 1 cut(s) 2206
BsmFI GGGAC 2 cut(s) 1429, 2934
BsmI GAATGC 2 cut(s) 1131, 1906
BsnI GGCC 3 cut(s) 365, 1161, 2413
BsoBI CYCGRG 4 cut(s) 218, 321, 739, 1361
Bsp119I TTCGAA 1 cut(s) 2835
Bsp1286I GDGCHC 1 cut(s) 34
Bsp1720I GCTNAGC 1 cut(s) 2635
Bsp68I TCGCGA 1 cut(s) 1592
BspACI CCGC 6 cut(s) 237, 684, 702, 1485, 2559, 2667
BspANI GGCC 3 cut(s) 365, 1161, 2413
BspCNI CTCAG 3 cut(s) 618, 2648, 2884
BspFNI CGCG 1 cut(s) 1592
BspHI TCATGA 1 cut(s) 2497
BspLI GGNNCC 6 cut(s) 820, 1054, 1779, 2040, 2414, 2653
BspPI GGATC 1 cut(s) 1863
BspQI GCTCTTC 1 cut(s) 2222
BspT104I TTCGAA 1 cut(s) 2835
BspT107I GGYRCC 2 cut(s) 1052, 1777
BspTI CTTAAG 1 cut(s) 1024
BsrBI CCGCTC 1 cut(s) 1485
BsrDI GCAATG 3 cut(s) 1068, 2159, 2512
BsrFI RCCGGY 1 cut(s) 2952
BsrI ACTGG 4 cut(s) 48, 170, 1892, 2910
BssAI RCCGGY 1 cut(s) 2952
BssECI CCNNGG 3 cut(s) 217, 1575, 2317
BssNAI GTATAC 1 cut(s) 1706
BssT1I CCWWGG 2 cut(s) 1575, 2317
Bst1107I GTATAC 1 cut(s) 1706
Bst2UI CCWGG 1 cut(s) 2036
Bst4CI ACNGT 3 cut(s) 231, 2149, 2495
Bst6I CTCTTC 4 cut(s) 1663, 2116, 2222, 2394
BstAFI CTTAAG 1 cut(s) 1024
BstBAI YACGTR 1 cut(s) 2408
BstBI TTCGAA 1 cut(s) 2835
BstC8I GCNNGC 3 cut(s) 81, 530, 2299
BstENI CCTNNNNNAGG 1 cut(s) 1785
BstF5I GGATG 3 cut(s) 315, 1064, 1269
BstFNI CGCG 1 cut(s) 1592
BstH2I RGCGCY 1 cut(s) 2339
BstHHI GCGC 2 cut(s) 2303, 2338
BstMAI GTCTC 5 cut(s) 105, 1364, 1592, 1892, 2206
BstMWI GCNNNNNNNGC 1 cut(s) 2849
BstNI CCWGG 1 cut(s) 2036
BstNSI RCATGY 3 cut(s) 183, 1381, 2209
BstSCI CCNGG 2 cut(s) 2034, 2750
BstSFI CTRYAG 1 cut(s) 2505
BstSNI TACGTA 1 cut(s) 2408
BstUI CGCG 1 cut(s) 1592
BstV1I GCAGC 1 cut(s) 2367
BstX2I RGATCY 6 cut(s) 502, 539, 937, 976, 1855, 2083
BstXI CCANNNNNNTGG 1 cut(s) 1124
BstYI RGATCY 6 cut(s) 502, 539, 937, 976, 1855, 2083
BstZ17I GTATAC 1 cut(s) 1706
BsuRI GGCC 3 cut(s) 365, 1161, 2413
BtgZI GCGATG 1 cut(s) 1607
BtrI CACGTC 2 cut(s) 2216, 2461
BtsCI GGATG 3 cut(s) 315, 1064, 1269
BtsI GCAGTG 1 cut(s) 2196
BtsIMutI CAGTG 5 cut(s) 34, 1899, 2196, 2491, 2903
BtuMI TCGCGA 1 cut(s) 1592
Cac8I GCNNGC 3 cut(s) 81, 530, 2299
CciI TCATGA 1 cut(s) 2497
CfoI GCGC 2 cut(s) 2303, 2338
Cfr10I RCCGGY 1 cut(s) 2952
Cfr13I GGNCC 2 cut(s) 1199, 2412
CsiI ACCWGGT 1 cut(s) 2034
Csp6I GTAC 5 cut(s) 917, 2145, 2307, 2350, 2886
CspAI ACCGGT 1 cut(s) 2952
CspCI CAANNNNNGTGG 4 cut(s) 1557, 1592, 2406, 2441
CviQI GTAC 5 cut(s) 917, 2145, 2307, 2350, 2886
DraI TTTAAA 4 cut(s) 564, 1101, 1920, 3010
DriI GACNNNNNGTC 1 cut(s) 2611
Eam1104I CTCTTC 4 cut(s) 1663, 2116, 2222, 2394
Eam1105I GACNNNNNGTC 1 cut(s) 2611
EarI CTCTTC 4 cut(s) 1663, 2116, 2222, 2394
Eco105I TACGTA 1 cut(s) 2408
Eco130I CCWWGG 2 cut(s) 1575, 2317
Eco147I AGGCCT 1 cut(s) 1161
Eco47I GGWCC 1 cut(s) 1199
Eco47III AGCGCT 1 cut(s) 2337
Eco57I CTGAAG 2 cut(s) 132, 1157
Eco88I CYCGRG 4 cut(s) 218, 321, 739, 1361
EcoNI CCTNNNNNAGG 1 cut(s) 1785
EcoO109I RGGNCCY 1 cut(s) 2412
EcoRI GAATTC 1 cut(s) 2327
EcoRII CCWGG 1 cut(s) 2034
EcoT14I CCWWGG 2 cut(s) 1575, 2317
ErhI CCWWGG 2 cut(s) 1575, 2317
Esp3I CGTCTC 1 cut(s) 2206
FalI AAGNNNNNCTT 4 cut(s) 952, 984, 2841, 2873
FaqI GGGAC 2 cut(s) 1429, 2934
FauI CCCGC 2 cut(s) 230, 691
FblI GTMKAC 2 cut(s) 1513, 1705
Fnu4HI GCNGC 3 cut(s) 1486, 2381, 2667
FokI GGATG 3 cut(s) 302, 1051, 1276
Fsp4HI GCNGC 3 cut(s) 1486, 2381, 2667
GlaI GCGC 2 cut(s) 2302, 2337
GluI GCNGC 3 cut(s) 1486, 2381, 2667
HaeII RGCGCY 1 cut(s) 2339
HaeIII GGCC 3 cut(s) 365, 1161, 2413
HapII CCGG 4 cut(s) 1197, 2640, 2751, 2953
HhaI GCGC 2 cut(s) 2303, 2338
Hin6I GCGC 2 cut(s) 2301, 2336
HinP1I GCGC 2 cut(s) 2301, 2336
HincII GTYRAC 2 cut(s) 1194, 1456
HindII GTYRAC 2 cut(s) 1194, 1456
HindIII AAGCTT 1 cut(s) 1223
HpaI GTTAAC 1 cut(s) 1456
HpaII CCGG 4 cut(s) 1197, 2640, 2751, 2953
HphI GGTGA 3 cut(s) 240, 2720, 2740
Hpy166II GTNNAC 9 cut(s) 60, 191, 1083, 1194, 1456, 1514, 1706, 2491, 2748
Hpy8I GTNNAC 9 cut(s) 60, 191, 1083, 1194, 1456, 1514, 1706, 2491, 2748
Hpy99I CGWCG 1 cut(s) 2173
HpyCH4III ACNGT 3 cut(s) 231, 2149, 2495
HpyCH4IV ACGT 5 cut(s) 2215, 2407, 2460, 2535, 3031
HpyF10VI GCNNNNNNNGC 1 cut(s) 2849
HpySE526I ACGT 5 cut(s) 2215, 2407, 2460, 2535, 3031
HspAI GCGC 2 cut(s) 2301, 2336
KspAI GTTAAC 1 cut(s) 1456
LguI GCTCTTC 1 cut(s) 2222
LmnI GCTCC 6 cut(s) 47, 537, 818, 1631, 2169, 2219
Lsp1109I GCAGC 1 cut(s) 2367
LweI GCATC 2 cut(s) 1857, 2278
MabI ACCWGGT 1 cut(s) 2034
MaeII ACGT 5 cut(s) 2215, 2407, 2460, 2535, 3031
MaeIII GTNAC 7 cut(s) 39, 175, 202, 962, 1034, 1373, 1472
MbiI CCGCTC 1 cut(s) 1485
MflI RGATCY 6 cut(s) 502, 539, 937, 976, 1855, 2083
MhlI GDGCHC 1 cut(s) 34
MlyI GAGTC 3 cut(s) 637, 1366, 2621
MmeI TCCRAC 5 cut(s) 69, 851, 1350, 1716, 2031
MroXI GAANNNNTTC 1 cut(s) 662
MslI CAYNNNNRTG 4 cut(s) 2459, 2496, 2568, 2709
MspCI CTTAAG 1 cut(s) 1024
MspI CCGG 4 cut(s) 1197, 2640, 2751, 2953
MspR9I CCNGG 2 cut(s) 2036, 2752
MssI GTTTAAAC 1 cut(s) 1101
Mva1269I GAATGC 2 cut(s) 1131, 1906
MvaI CCWGG 1 cut(s) 2036
MvnI CGCG 1 cut(s) 1592
MwoI GCNNNNNNNGC 1 cut(s) 2849
NciI CCSGG 1 cut(s) 2752
NlaIV GGNNCC 6 cut(s) 820, 1054, 1779, 2040, 2414, 2653
NmeAIII GCCGAG 1 cut(s) 2566
NmuCI GTSAC 1 cut(s) 1373
NruI TCGCGA 1 cut(s) 1592
NspI RCATGY 3 cut(s) 183, 1381, 2209
NspV TTCGAA 1 cut(s) 2835
PaeR7I CTCGAG 1 cut(s) 321
PagI TCATGA 1 cut(s) 2497
PceI AGGCCT 1 cut(s) 1161
PciI ACATGT 1 cut(s) 179
PciSI GCTCTTC 1 cut(s) 2222
PctI GAATGC 2 cut(s) 1131, 1906
PdmI GAANNNNTTC 1 cut(s) 662
PfeI GAWTC 8 cut(s) 388, 867, 949, 992, 1150, 1276, 2249, 2854
PflFI GACNNNGTC 1 cut(s) 627
PflMI CCANNNNNTGG 1 cut(s) 2678
PinAI ACCGGT 1 cut(s) 2952
PkrI GCNGC 3 cut(s) 1487, 2382, 2668
PleI GAGTC 3 cut(s) 636, 1365, 2620
PmeI GTTTAAAC 1 cut(s) 1101
PpsI GAGTC 3 cut(s) 636, 1365, 2620
Ppu21I YACGTR 1 cut(s) 2408
PscI ACATGT 1 cut(s) 179
Psp6I CCWGG 1 cut(s) 2034
PspGI CCWGG 1 cut(s) 2034
PspN4I GGNNCC 6 cut(s) 820, 1054, 1779, 2040, 2414, 2653
PspPI GGNCC 2 cut(s) 1199, 2412
PsuI RGATCY 6 cut(s) 502, 539, 937, 976, 1855, 2083
PsyI GACNNNGTC 1 cut(s) 627
RruI TCGCGA 1 cut(s) 1592
RsaI GTAC 5 cut(s) 918, 2146, 2308, 2351, 2887
RsaNI GTAC 5 cut(s) 917, 2145, 2307, 2350, 2886
RseI CAYNNNNRTG 4 cut(s) 2459, 2496, 2568, 2709
SapI GCTCTTC 1 cut(s) 2222
SatI GCNGC 3 cut(s) 1486, 2381, 2667
Sau96I GGNCC 2 cut(s) 1199, 2412
ScaI AGTACT 2 cut(s) 2308, 2351
SchI GAGTC 3 cut(s) 637, 1366, 2621
ScrFI CCNGG 2 cut(s) 2036, 2752
SduI GDGCHC 1 cut(s) 34
SexAI ACCWGGT 1 cut(s) 2034
SfaNI GCATC 2 cut(s) 1857, 2278
SfcI CTRYAG 1 cut(s) 2505
Sfr274I CTCGAG 1 cut(s) 321
SfuI TTCGAA 1 cut(s) 2835
SinI GGWCC 1 cut(s) 1199
SlaI CTCGAG 1 cut(s) 321
SmiMI CAYNNNNRTG 4 cut(s) 2459, 2496, 2568, 2709
SmlI CTYRAG 7 cut(s) 102, 321, 707, 1024, 1137, 1538, 2522
SmoI CTYRAG 7 cut(s) 102, 321, 707, 1024, 1137, 1538, 2522
SnaBI TACGTA 1 cut(s) 2408
SseBI AGGCCT 1 cut(s) 1161
SsiI CCGC 6 cut(s) 237, 684, 702, 1485, 2559, 2667
SspI AATATT 3 cut(s) 844, 1715, 2449
StuI AGGCCT 1 cut(s) 1161
StyD4I CCNGG 2 cut(s) 2034, 2750
StyI CCWWGG 2 cut(s) 1575, 2317
TaaI ACNGT 3 cut(s) 231, 2149, 2495
TaiI ACGT 5 cut(s) 2218, 2410, 2463, 2538, 3034
TaqI TCGA 6 cut(s) 322, 511, 1982, 2397, 2604, 2835
TatI WGTACW 2 cut(s) 2306, 2349
TauI GCSGC 2 cut(s) 1488, 2669
TfiI GAWTC 8 cut(s) 388, 867, 949, 992, 1150, 1276, 2249, 2854
TscAI CASTG 5 cut(s) 34, 1899, 2196, 2498, 2910
TseFI GTSAC 1 cut(s) 1373
TseI GCWGC 1 cut(s) 2380
Tsp45I GTSAC 1 cut(s) 1373
TspDTI ATGAA 6 cut(s) 17, 81, 627, 671, 2240, 2474
TspGWI ACGGA 2 cut(s) 2186, 2873
TspRI CASTG 5 cut(s) 34, 1899, 2196, 2498, 2910
Tth111I GACNNNGTC 1 cut(s) 627
Van91I CCANNNNNTGG 1 cut(s) 2678
Vha464I CTTAAG 1 cut(s) 1024
VpaK11BI GGWCC 1 cut(s) 1199
XagI CCTNNNNNAGG 1 cut(s) 1785
XapI RAATTY 7 cut(s) 662, 983, 1618, 1792, 2327, 2600, 2785
XbaI TCTAGA 3 cut(s) 376, 413, 2542
XceI RCATGY 3 cut(s) 183, 1381, 2209
XhoI CTCGAG 1 cut(s) 321
XmiI GTMKAC 2 cut(s) 1513, 1705
XmnI GAANNNNTTC 1 cut(s) 662
ZrmI AGTACT 2 cut(s) 2308, 2351
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.