RchiOBHm_Chr1g0325541
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
13529805 .. 13532994
3190 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55525

Sequence Viewer

Length: 3027 bp
ATGAGATTTTTGTCTGTGAAATTCGTTTTGATATACTCAGTTTTAAATACAATACTCATTTTATGTTCTAGCTCCTCCATGCAACTAAACCATCCCTTAACCACGAGACTTGGGGGGAATGAGACAGATAGGCTGGCACTGCTAGCAATCAAAGCTCAAATAAAACACGATCCCAACCAGGTCACAAGCTCATGGAATGAATCCCTTCATTTTTGCCTGTGGCACGGCATCACCTGCAGTCAACGACATCGCCAAAGGGTGACGAAGCTGGAGCTGCGCTCTCTAGCTTTGGGGGGATCCATATCTCCACACATAGGAAATCTAAGCTTCTTAAGAGTGCTAAATCTCGAGAACAATAGCTTCACTCATCAAATCCCTCCTCAAATTGGGCATTTGAATAGATTGCAGGTATTGCTTCTAAAGGAAAACTCACTTACTGGCACCATTCCTGCCAATATATCAAATTGCTTCAAACTCATCACTCTCCATCTTGGTGAGAACAATCTCGTGGGTAAAATTTCTCCCAAACTGAGTTCCTTGTCAAAGCTTCAGATTTTTTCTTTGCAATACAACAATCTAACAGGAGAGATCCCTCCTTCTTTGGGAAACCTTTCGTCTATGGAGAAATTTGGTTTAGGTCCTAACTACTTAGAAGGAAGCATCCCCAGTTCTCTATGCCAGTTGAAAAAAGTAACATTTTTCTCTTTGGCAGTAAATAGGTTGTCTGGTATCATCCCTTCCTGCATTTATAACCTCTCTGGTATAGTTGTCTTTCAGGTACTACTAAACCAAATTCAAGGAAGTCTTCCATCAAATTTGAACCATGCTTTTCCCAACCTTCAAGACTTTGCCATTTCTAATAATCAATTTACGGGGGCCATCCCTTCGTCAATATCCAATGCGACAAATCTTGTGAATTTTCAATGTGCTTATAACAAACTCACCGGAAATGTGCCAAATTTACGAAATCTTCATAACCTTGTGTTATTCAATGTCGACTTTAATAATCTTGGAAGCGGTAAACTTGGTGACATGAGTTTTGTATCAGACTTGATCAACGCCACACGGCTGGCACGGTTGGAGTACGGCTACAACAAATTTGGAGGAACATTTCCCACATCAATATTCAATCTCTCAACCAATCTCAAAACGCTTGTAATTGGAGGAAACTACCTACATGGAAGCATCCCAACTGGGTTAGGGAATCTTGTAAACCTGCTAGTACTCAGTCTGGAGGAAAACAACTTCATAGGTAGCATCCCCGCAGACATTGGGAAAGTTTTAAGGCTTGGATTAGCTTTTTTTTATAGCAACAAATTATCAGGGAGCATTCCATCTTCTCTTGGAAATTTAACAATGTTAAACTCTCTTTACTTGGATGAAAATAATCTCAATGGAAGCATCCCTTCAAGCCTAGGAGAATGTCACGGGTTGCAAGACTTGGATCTTTCTGAAAATAGCTTAGAAGGCAAAATACCTCAACAATTACTTAATGGTCTCCTCTCTTTATCAATTTCTTTGAACTTGTCAACAAACCAGTTTACTGGTTCCCTTCCCGTTGAGATTGGAAAGTTGAAGGCTCTAGGTAAGCTAGACATTTCTAACAATATGTTATCTGGAGAACTCCCTAGTAGCCTCGGTAGTTGTCAAAGTTTAGAAGTCCTACACTTGCAAGGCAACTTCTTCAACGGGTTCATCCCTTCATCTATGAAGGAATTGAGAGGGATTCAAGATTTAGACCTTTCTCGCAACAATTTCTCAGGAGATATTCCACAGTTCTTCGAGGGCTTTCGAAACTTGGAGAATCTCAATCTATCCTTCAATCAATTTTGGGGAGCAGTACCAATTGATGGTGTTTTTAAGAATGCAAGTGCGACTTCAGTTGCTGGAAACACCAGACTGTGCGGCGGTATTGCTAACTTTCGACTTCCTGTGTGTAAGTCCCATGGAGGAGGATTGTCCCGTGAAATGAAACTAATGATCTCTTTGGTCTCTGGGTTCACACTTTTGGGATTGGCTATGGTGCTGTCTTTTTTCCTTCTTTGTAAGAAAATGAAAGAAACTAAATTAAGCACTTTGGAGAACTCTATTTTGCAAGTTTCATACGCTACACTCTTGAAAGCTACTGATGGTTTTTCTTCAAGTAATTTGATTGGTGTGGGTGCTTTTGGGTCTGTGTACAAAGGAATTCTTGTTGATGATAGAGTTGTCGCTGTGAAGGTACTTAACATGTTACACCAAGGAGCATCAAAGAGTTTCATGGCTGAATGTAAGGCTTTGAGAAACATCAGGCATCGAAATCTGGTCAAGATCTTAACTGTATGTTCAAGTAATGATTTCAGCGGCAATGATTTTAGGGCTCTCGTTTACGAGTTCATGGACAACGGGAGCTTAGATGAGTGGTTGCATCCATCCACTAGAAATGAAGAGGTGATAGAAGCACCCAAAAGTTTAAGCCTTGTTCAGAGGCTCAACATTGCCATTGAGTTCATTGTGATCTCAAGCCAAGTAATTAATGTTCTTTTGGACAATGACCTGACTGGACATGTTTCTGACTTTGGGCTTTCAAGGTTTCTCTCGGAACCAACCAATAATGTTTCTATAAATCAATCAAGCTCCATCGGAATCAAAGGATCAGTTGGTTATGCTGCTCCAGAGTATGGTATGGGAAGTGGAGTGTCGACATATGGGGATGTCTACAGCTTTGGCATTCTCTTGTTAGAAATGTTTACAGGGAAGAGACCCACTGATCCCATGTTCAGTGACGGCCTGAATCTTCATTATTTTGTGAAGACAGCTCTCCCTGAAGGTGTTGCAGACATTGCAGATTTGCTTGTTCTTCAAGGACGCAATATAAACGTCGAAGAAGCCCACACACAGAGTATGAGAGAACAAAAAATTGATGGGTACTTGACTTCGATATTTGAAATTGGAATTGCCTGTTCTGTCGAATCCCCAACTAACCGAAAGGATATTAGTGATGTTGCATCTGAATTGCACACAATTAGGGGTAATCTTCTTGGCTAG

Protein Analysis

1008

Amino Acids

109.71

Weight (kDa)

7.3

Isoelectric Point (pI)

29.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 41 - 80 6.4e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 96 - 231 3.5e-12 Leucine-rich repeat region
LRR_14 PF23598 471 - 604 9.6e-10 Leucine-rich repeat region
LRR_8 PF13855 551 - 610 1.2e-08 Leucine rich repeat
Pkinase PF00069 714 - 917 4.6e-25 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 716 - 932 8.4e-29 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 750, 933
AarI CACCTGC 1 cut(s) 242
Acc36I ACCTGC 3 cut(s) 242, 397, 1224
AccB1I GGYRCC 1 cut(s) 440
AccB7I CCANNNNNTGG 2 cut(s) 1850, 2660
AccI GTMKAC 3 cut(s) 996, 2681, 2697
AciI CCGC 5 cut(s) 1017, 1263, 1905, 1908, 2343
AclWI GGATC 7 cut(s) 164, 291, 304, 583, 1452, 2641, 2744
AcuI CTGAAG 3 cut(s) 533, 1863, 2826
AfaI GTAC 7 cut(s) 780, 1085, 1224, 1842, 2180, 2223, 2909
AfiI CCNNNNNNNGG 5 cut(s) 314, 386, 602, 1850, 2660
AflII CTTAAG 1 cut(s) 331
AflIII ACRYGT 2 cut(s) 2229, 2545
AjnI CCWGG 1 cut(s) 177
Alw26I GTCTC 5 cut(s) 100, 116, 1502, 1996, 2734
AlwI GGATC 7 cut(s) 164, 291, 304, 583, 1452, 2641, 2744
AlwNI CAGNNNCTG 1 cut(s) 1886
Ama87I CYCGRG 1 cut(s) 347
AoxI GGCC 2 cut(s) 876, 2767
ApeKI GCWGC 2 cut(s) 274, 2648
ArsI GACNNNNNNTTYG 2 cut(s) 1022, 1054
AseI ATTAAT 1 cut(s) 2514
Asp700I GAANNNNTTC 2 cut(s) 204, 610
AspA2I CCTAGG 1 cut(s) 1414
AspLEI GCGC 1 cut(s) 279
AspS9I GGNCC 2 cut(s) 638, 876
AsuHPI GGTGA 6 cut(s) 223, 271, 506, 934, 1040, 2443
AsuII TTCGAA 1 cut(s) 1792
AsuNHI GCTAGC 1 cut(s) 142
AvaI CYCGRG 1 cut(s) 347
AvaII GGWCC 1 cut(s) 638
AvrII CCTAGG 1 cut(s) 1414
BamHI GGATCC 1 cut(s) 296
BanI GGYRCC 1 cut(s) 440
BanII GRGCYC 1 cut(s) 2362
BarI GAAGNNNNNNTAC 4 cut(s) 721, 753, 1458, 1490
BauI CACGAG 2 cut(s) 103, 506
BbsI GAAGAC 2 cut(s) 797, 2798
BbvI GCAGC 2 cut(s) 261, 2635
BceAI ACGGC 4 cut(s) 241, 1082, 1102, 2782
BciT130I CCWGG 1 cut(s) 179
BclI TGATCA 1 cut(s) 1053
BcoDI GTCTC 5 cut(s) 100, 116, 1502, 1996, 2734
BfmI CTRYAG 2 cut(s) 235, 2698
BfrI CTTAAG 1 cut(s) 331
BfuAI ACCTGC 3 cut(s) 242, 397, 1224
BglII AGATCT 1 cut(s) 2310
BisI GCNGC 4 cut(s) 275, 1906, 2344, 2649
BlnI CCTAGG 1 cut(s) 1414
BlsI GCNGC 4 cut(s) 276, 1907, 2345, 2650
BmcAI AGTACT 1 cut(s) 1224
Bme1390I CCNGG 1 cut(s) 179
Bme18I GGWCC 1 cut(s) 638
BmeT110I CYCGRG 1 cut(s) 347
BmgT120I GGNCC 2 cut(s) 638, 876
BmiI GGNNCC 5 cut(s) 298, 442, 877, 1549, 2583
BmrFI CCNGG 1 cut(s) 179
BmrI ACTGGG 2 cut(s) 660, 1203
BmsI GCATC 9 cut(s) 237, 669, 1194, 1266, 1410, 2255, 2302, 2416, 2996
BmtI GCTAGC 1 cut(s) 146
BmuI ACTGGG 2 cut(s) 660, 1203
BpiI GAAGAC 2 cut(s) 797, 2798
BplI GAGNNNNNCTC 2 cut(s) 263, 295
BpmI CTGGAG 4 cut(s) 290, 1253, 1638, 2637
Bpu14I TTCGAA 1 cut(s) 1792
BpuEI CTTGAG 1 cut(s) 2485
BsaBI GATNNNNATC 1 cut(s) 301
BsaI GGTCTC 3 cut(s) 1502, 1996, 2734
BsaJI CCNNGG 4 cut(s) 1414, 1636, 1945, 2239
BsaWI WCCGGW 1 cut(s) 944
Bsc4I CCNNNNNNNGG 5 cut(s) 314, 386, 602, 1850, 2660
Bse1I ACTGG 7 cut(s) 442, 666, 679, 1198, 1537, 1549, 2545
Bse3DI GCAATG 3 cut(s) 2353, 2475, 2820
Bse8I GATNNNNATC 1 cut(s) 301
BseBI CCWGG 1 cut(s) 179
BseDI CCNNGG 4 cut(s) 1414, 1636, 1945, 2239
BseJI GATNNNNATC 1 cut(s) 301
BseLI CCNNNNNNNGG 5 cut(s) 314, 386, 602, 1850, 2660
BseMI GCAATG 3 cut(s) 2353, 2475, 2820
BseMII CTCAG 4 cut(s) 51, 521, 1240, 1773
BseNI ACTGG 7 cut(s) 442, 666, 679, 1198, 1537, 1549, 2545
BseRI GAGGAG 4 cut(s) 64, 369, 1490, 1965
BseXI GCAGC 2 cut(s) 261, 2635
BshFI GGCC 2 cut(s) 878, 2769
BshNI GGYRCC 1 cut(s) 440
BsiHKCI CYCGRG 1 cut(s) 347
BsiSI CCGG 1 cut(s) 945
BslFI GGGAC 2 cut(s) 1927, 1945
BslI CCNNNNNNNGG 5 cut(s) 314, 386, 602, 1850, 2660
BsmAI GTCTC 5 cut(s) 100, 116, 1502, 1996, 2734
BsmFI GGGAC 2 cut(s) 1927, 1945
BsmI GAATGC 3 cut(s) 1329, 1870, 2709
BsnI GGCC 2 cut(s) 878, 2769
Bso31I GGTCTC 3 cut(s) 1502, 1996, 2734
BsoBI CYCGRG 1 cut(s) 347
Bsp119I TTCGAA 1 cut(s) 1792
Bsp1286I GDGCHC 1 cut(s) 2362
Bsp1407I TGTACA 1 cut(s) 2178
Bsp19I CCATGG 1 cut(s) 1945
BspACI CCGC 5 cut(s) 1017, 1263, 1905, 1908, 2343
BspANI GGCC 2 cut(s) 878, 2769
BspCNI CTCAG 4 cut(s) 50, 522, 1239, 1772
BspLI GGNNCC 5 cut(s) 298, 442, 877, 1549, 2583
BspMAI CTGCAG 1 cut(s) 239
BspMI ACCTGC 3 cut(s) 242, 397, 1224
BspOI GCTAGC 1 cut(s) 146
BspPI GGATC 7 cut(s) 164, 291, 304, 583, 1452, 2641, 2744
BspT104I TTCGAA 1 cut(s) 1792
BspT107I GGYRCC 1 cut(s) 440
BspTI CTTAAG 1 cut(s) 331
BspTNI GGTCTC 3 cut(s) 1502, 1996, 2734
BsrDI GCAATG 3 cut(s) 2353, 2475, 2820
BsrGI TGTACA 1 cut(s) 2178
BsrI ACTGG 7 cut(s) 442, 666, 679, 1198, 1537, 1549, 2545
BssECI CCNNGG 4 cut(s) 1414, 1636, 1945, 2239
BssSI CACGAG 2 cut(s) 103, 506
BssT1I CCWWGG 3 cut(s) 1414, 1945, 2239
Bst2BI CACGAG 2 cut(s) 103, 506
Bst2UI CCWGG 1 cut(s) 179
Bst4CI ACNGT 4 cut(s) 1077, 1776, 1902, 2320
Bst6I CTCTTC 2 cut(s) 2421, 2732
BstAFI CTTAAG 1 cut(s) 331
BstAPI GCANNNNNTGC 3 cut(s) 234, 412, 2822
BstAUI TGTACA 1 cut(s) 2178
BstBI TTCGAA 1 cut(s) 1792
BstC8I GCNNGC 3 cut(s) 135, 144, 1071
BstDEI CTNAG 8 cut(s) 37, 323, 530, 649, 1226, 1462, 1759, 2392
BstDSI CCRYGG 1 cut(s) 1945
BstHHI GCGC 1 cut(s) 279
BstMAI GTCTC 5 cut(s) 100, 116, 1502, 1996, 2734
BstMWI GCNNNNNNNGC 8 cut(s) 139, 143, 152, 234, 274, 412, 1467, 2822
BstNI CCWGG 1 cut(s) 179
BstNSI RCATGY 2 cut(s) 2233, 2549
BstSCI CCNGG 1 cut(s) 177
BstSFI CTRYAG 2 cut(s) 235, 2698
BstV1I GCAGC 2 cut(s) 261, 2635
BstV2I GAAGAC 2 cut(s) 797, 2798
BstX2I RGATCY 4 cut(s) 296, 588, 1444, 2310
BstXI CCANNNNNNTGG 2 cut(s) 1069, 1544
BstYI RGATCY 4 cut(s) 296, 588, 1444, 2310
BsuRI GGCC 2 cut(s) 878, 2769
BtgI CCRYGG 1 cut(s) 1945
BtgZI GCGATG 1 cut(s) 233
BtsI GCAGTG 1 cut(s) 137
BtsIMutI CAGTG 3 cut(s) 137, 2745, 2767
BveI ACCTGC 3 cut(s) 242, 397, 1224
Cac8I GCNNGC 3 cut(s) 135, 144, 1071
CaiI CAGNNNCTG 1 cut(s) 1886
CfoI GCGC 1 cut(s) 279
Cfr13I GGNCC 2 cut(s) 638, 876
CseI GACGC 1 cut(s) 2856
CsiI ACCWGGT 1 cut(s) 177
Csp6I GTAC 7 cut(s) 779, 1084, 1223, 1841, 2179, 2222, 2908
CspCI CAANNNNNGTGG 2 cut(s) 91, 126
CviQI GTAC 7 cut(s) 779, 1084, 1223, 1841, 2179, 2222, 2908
DdeI CTNAG 8 cut(s) 37, 323, 530, 649, 1226, 1462, 1759, 2392
DraI TTTAAA 1 cut(s) 45
Eam1104I CTCTTC 2 cut(s) 2421, 2732
EarI CTCTTC 2 cut(s) 2421, 2732
Eco130I CCWWGG 3 cut(s) 1414, 1945, 2239
Eco24I GRGCYC 1 cut(s) 2362
Eco31I GGTCTC 3 cut(s) 1502, 1996, 2734
Eco47I GGWCC 1 cut(s) 638
Eco57I CTGAAG 3 cut(s) 533, 1863, 2826
Eco88I CYCGRG 1 cut(s) 347
EcoO109I RGGNCCY 1 cut(s) 638
EcoRI GAATTC 1 cut(s) 2187
EcoRII CCWGG 1 cut(s) 177
EcoT14I CCWWGG 3 cut(s) 1414, 1945, 2239
EcoT38I GRGCYC 1 cut(s) 2362
ErhI CCWWGG 3 cut(s) 1414, 1945, 2239
FalI AAGNNNNNCTT 8 cut(s) 789, 821, 1390, 1422, 1861, 1893, 2175, 2207
FaqI GGGAC 2 cut(s) 1927, 1945
FauI CCCGC 1 cut(s) 1270
FauNDI CATATG 1 cut(s) 2686
FbaI TGATCA 1 cut(s) 1053
FblI GTMKAC 3 cut(s) 996, 2681, 2697
Fnu4HI GCNGC 4 cut(s) 275, 1906, 2344, 2649
FriOI GRGCYC 1 cut(s) 2362
Fsp4HI GCNGC 4 cut(s) 275, 1906, 2344, 2649
GlaI GCGC 1 cut(s) 278
GluI GCNGC 4 cut(s) 275, 1906, 2344, 2649
GsuI CTGGAG 4 cut(s) 290, 1253, 1638, 2637
HaeIII GGCC 2 cut(s) 878, 2769
HapII CCGG 1 cut(s) 945
HgaI GACGC 1 cut(s) 2856
HhaI GCGC 1 cut(s) 279
Hin6I GCGC 1 cut(s) 277
HinP1I GCGC 1 cut(s) 277
HincII GTYRAC 4 cut(s) 242, 997, 1530, 2682
HindII GTYRAC 4 cut(s) 242, 997, 1530, 2682
HindIII AAGCTT 2 cut(s) 325, 545
HinfI GANTC 7 cut(s) 200, 1204, 1726, 1804, 2625, 2773, 2951
HpaII CCGG 1 cut(s) 945
HphI GGTGA 6 cut(s) 223, 271, 506, 934, 1040, 2443
Hpy188I TCNGA 8 cut(s) 552, 1048, 1453, 2466, 2554, 2581, 2624, 2992
Hpy99I CGWCG 1 cut(s) 2864
HpyCH4III ACNGT 4 cut(s) 1077, 1776, 1902, 2320
HpyCH4IV ACGT 1 cut(s) 2859
HpyF10VI GCNNNNNNNGC 8 cut(s) 139, 143, 152, 234, 274, 412, 1467, 2822
HpyF3I CTNAG 8 cut(s) 37, 323, 530, 649, 1226, 1462, 1759, 2392
HpySE526I ACGT 1 cut(s) 2859
HspAI GCGC 1 cut(s) 277
Ksp22I TGATCA 1 cut(s) 1053
LmnI GCTCC 8 cut(s) 77, 271, 1326, 1835, 2243, 2388, 2621, 2656
Lsp1109I GCAGC 2 cut(s) 261, 2635
LweI GCATC 9 cut(s) 237, 669, 1194, 1266, 1410, 2255, 2302, 2416, 2996
MabI ACCWGGT 1 cut(s) 177
MaeII ACGT 1 cut(s) 2859
MaeIII GTNAC 7 cut(s) 181, 259, 691, 1028, 1424, 2232, 2762
MfeI CAATTG 1 cut(s) 1845
MflI RGATCY 4 cut(s) 296, 588, 1444, 2310
MhlI GDGCHC 1 cut(s) 2362
MmeI TCCRAC 1 cut(s) 1059
MroXI GAANNNNTTC 2 cut(s) 204, 610
MslI CAYNNNNRTG 1 cut(s) 492
MspA1I CMGCKG 1 cut(s) 2343
MspCI CTTAAG 1 cut(s) 331
MspI CCGG 1 cut(s) 945
MspR9I CCNGG 1 cut(s) 179
MunI CAATTG 1 cut(s) 1845
Mva1269I GAATGC 3 cut(s) 1329, 1870, 2709
MvaI CCWGG 1 cut(s) 179
MwoI GCNNNNNNNGC 8 cut(s) 139, 143, 152, 234, 274, 412, 1467, 2822
NcoI CCATGG 1 cut(s) 1945
NdeI CATATG 1 cut(s) 2686
NheI GCTAGC 1 cut(s) 142
NlaIV GGNNCC 5 cut(s) 298, 442, 877, 1549, 2583
NmuCI GTSAC 5 cut(s) 181, 259, 1028, 1424, 2762
NspI RCATGY 2 cut(s) 2233, 2549
NspV TTCGAA 1 cut(s) 1792
PaeR7I CTCGAG 1 cut(s) 347
PaqCI CACCTGC 1 cut(s) 242
PciI ACATGT 2 cut(s) 2229, 2545
PctI GAATGC 3 cut(s) 1329, 1870, 2709
PdmI GAANNNNTTC 2 cut(s) 204, 610
PfeI GAWTC 7 cut(s) 200, 1204, 1726, 1804, 2625, 2773, 2951
PflMI CCANNNNNTGG 2 cut(s) 1850, 2660
PkrI GCNGC 4 cut(s) 276, 1907, 2345, 2650
PpuMI RGGWCCY 1 cut(s) 638
PscI ACATGT 2 cut(s) 2229, 2545
PshBI ATTAAT 1 cut(s) 2514
PsiI TTATAA 2 cut(s) 750, 933
Psp5II RGGWCCY 1 cut(s) 638
Psp6I CCWGG 1 cut(s) 177
PspGI CCWGG 1 cut(s) 177
PspN4I GGNNCC 5 cut(s) 298, 442, 877, 1549, 2583
PspPI GGNCC 2 cut(s) 638, 876
PspPPI RGGWCCY 1 cut(s) 638
PsrI GAACNNNNNNTAC 2 cut(s) 2502, 2534
PstI CTGCAG 1 cut(s) 239
PstNI CAGNNNCTG 1 cut(s) 1886
PsuI RGATCY 4 cut(s) 296, 588, 1444, 2310
RsaI GTAC 7 cut(s) 780, 1085, 1224, 1842, 2180, 2223, 2909
RsaNI GTAC 7 cut(s) 779, 1084, 1223, 1841, 2179, 2222, 2908
RseI CAYNNNNRTG 1 cut(s) 492
SalI GTCGAC 2 cut(s) 995, 2680
SatI GCNGC 4 cut(s) 275, 1906, 2344, 2649
Sau96I GGNCC 2 cut(s) 638, 876
ScaI AGTACT 1 cut(s) 1224
ScrFI CCNGG 1 cut(s) 179
SduI GDGCHC 1 cut(s) 2362
SexAI ACCWGGT 1 cut(s) 177
SfaNI GCATC 9 cut(s) 237, 669, 1194, 1266, 1410, 2255, 2302, 2416, 2996
SfcI CTRYAG 2 cut(s) 235, 2698
Sfr274I CTCGAG 1 cut(s) 347
SfuI TTCGAA 1 cut(s) 1792
SinI GGWCC 1 cut(s) 638
SlaI CTCGAG 1 cut(s) 347
SmiMI CAYNNNNRTG 1 cut(s) 492
SmlI CTYRAG 3 cut(s) 331, 347, 2500
SmoI CTYRAG 3 cut(s) 331, 347, 2500
SsiI CCGC 5 cut(s) 1017, 1263, 1905, 1908, 2343
SspI AATATT 1 cut(s) 1125
StyD4I CCNGG 1 cut(s) 177
StyI CCWWGG 3 cut(s) 1414, 1945, 2239
TaaI ACNGT 4 cut(s) 1077, 1776, 1902, 2320
TaiI ACGT 1 cut(s) 2862
TatI WGTACW 2 cut(s) 1222, 2178
TauI GCSGC 2 cut(s) 1908, 2346
TfiI GAWTC 7 cut(s) 200, 1204, 1726, 1804, 2625, 2773, 2951
TscAI CASTG 3 cut(s) 144, 2752, 2767
TseFI GTSAC 5 cut(s) 181, 259, 1028, 1424, 2762
TseI GCWGC 2 cut(s) 274, 2648
Tsp45I GTSAC 5 cut(s) 181, 259, 1028, 1424, 2762
TspRI CASTG 3 cut(s) 144, 2752, 2767
Van91I CCANNNNNTGG 2 cut(s) 1850, 2660
Vha464I CTTAAG 1 cut(s) 331
VpaK11BI GGWCC 1 cut(s) 638
VspI ATTAAT 1 cut(s) 2514
XceI RCATGY 2 cut(s) 2233, 2549
XhoI CTCGAG 1 cut(s) 347
XmaJI CCTAGG 1 cut(s) 1414
XmiI GTMKAC 3 cut(s) 996, 2681, 2697
XmnI GAANNNNTTC 2 cut(s) 204, 610
ZrmI AGTACT 1 cut(s) 1224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.