RchiOBHm_Chr1g0337391
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
29127768 .. 29131013
3246 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56529

Sequence Viewer

Length: 3138 bp
ATGGAGATCTCATGCATGGGTGTGAGGATTTGGTCAGTATTCATGCAACTGTTTCCCCTGATGATCATCACTTTGGCCTCTTCAAATCTGAGAGGAAATGAGGTGGAAAGACGGTCCTTGCTTGCCTTTAAATCTGAAGTAGTCAGTGATCCTCTGGGCATCCTTAGCTCCTGGAATGATTCCTCCAACTTATGTGATGAGTGGCGAGGGATTACTTGCGGCCGAAGACACCAGCGAGTCACGGTTCTGGACCTCCACTACAGCCAGCTGGAGGGTATTCTATCTCCACACATCGGAAACTTGAGCTTTCTCAGGACATTAAATCTCCAAAACAATAGCTTCAACGGCACCATCCCTCAAGAAGTTGGTCGATTGTCTCGGCTGCAACGACTACACCTCGGGGACAACTTCTTCAAAGGTGACATCCCCATCAATATATCTCATTGTTTTAATCTCCAATATCTTGTCTTGGCTAATAACACTCTTAGTGGGAAACTTCCACTGGAACTTGGCTCATTGTTCAAGCTTAGAGTACTTACTTTGCGTAGGAACAATTTAGTTGGGGAAATTCCATCTTCTTATGGAAATCTTTCTTATCTTCAAATTCTTTCTCTGGAAGAAAATATTCTGTATGGTGGTCTCTTGAGTAGCCGCCTTGGGGAATTAAAAAGCTTAAGACATCTCGCATTGGGTTCAAATAGATTGACTGGTACCATCCCTCTCTCCATATACAACCTTTCTTCCATTGAGCACATTTCTGTGATTGGAAACCAATTTCATGGAACTCTTCCTTCTGGGTTGGGCCGCACAATATTTCCAAAACTTCGAACCTTTCATTTCCAAATGAACAATTTCAGAGGACCAATTCCATTTAGAATCTCAAATGCATCCCAGCTTTCACAATTTGGGATCTCTATGAATTATTTTACCGGAAAAGTTCCTAGTCTTGCAAGAGTGTCCAATTTGGTTCGCTTGGAAATGGATGATAATAATCTGGGAAATGAGGATGGTGACTTGGATTTTCTCTCTTCTCTGGTCAATTGTACCAGTTTAGAACTTCTGGATATTAGTGGGAATAACTTTCAAGGAGTGCTACCTGAATCTATCGGCAATCTCTCAACAAGTCTCGAGGTAATGAGCTTAGGAAGGAATCAGCTAAGCGGAAGCATTCCCATTGGGATTGGAAATCTCCTCAACTTGGGAGTACTACGCTTCGAGACAAACCTATTGACAGGCAACATACCAAATTCGTTATGTAAGATAAGTAAATTGTACAATCTGTTTTTAAGTGATAATCAGCTATCAGGTACTATCCCAACTTGTCTGAATAATTTAACTTTGTTAAGTCGCTTAGTTCTCAATTCAAACAACTTGCAAGGAGGCATACCGCAGAGTCTTGGCCAATGCACGAATCTGTTAGCTTTGGTTCTTTCTCAAAATAATCTCACCGGTCTAATTCCACAAGAAGTCATCCGTTTACCATCCCTGTCACTAGTATTGGATATATCCAGTAACCATTTTAGTGGTAACATTCCCATGGAAGTAGGTTTTTTGTCTAATCTTGGTATCTTGAATCTAGCTGAAAATATATTATCTGGTGAGATTCTTCAAAGCTTAGGGGACTGCACAAGTCTAGAATATTTGAACCTGAGTGGAAACATGTTGCATGGGACAATTTCTCAATCATTGAGTTCTTTGAGAGGCCTTCAATATCTTGACCTCTCTCGTAACAATTTCTCTGGAACAATTCCCAATTATTTGCAGACTTTCCCCTTCTTGCAGAATTTGAACTTCTCCTTTAATCATTTTAGAGGGGAAGTACCCATAAAAGGTGTTTTCAAGAATACAAGTGCGGTTTCTTTCTTGGGAAATGGACGACTTTGTGGACGTGTACCTCAGTTAAGATTGCCTATCTGTCCCCCCGATCTACCTAGGAAGCTGCCTAAGCCAGCTAATGCATTATTTCATAAGCTGGCTGTTATCATAATTTCTTTTGGGGCCATTGGAGTTATTTGGTTATTGTACTTAATGCTCCTTTTTAGATCAACAGAATCAGGAGTTGAGTCATCTTCAGAACCATCCTTGGATGTTTCATTCTTAAAATTGTCATACAGCGATCTCCTGAAAGCAACTGATGGCTTTTCTTCTCGGAATTTAATTGGTTCCGGTAGCTCTGGTTCTGTGTTCTGGGGAGTTCTCGATCAACCTGAAGAAATAATTGTTGCTGTGAAAGTACTCAATCTTCAAAGTTCGAGAGCTTCTAGAAGTTTCATATCTGAATGTGAAGTGTTGAAAAGCATAAGGCACCGGAATCTGGTCAGACTGGTGACCGCTTGCTCAAGCATTGATTTTCAAGGGAACGAATTCAAAGCTTTGGTCTTTGAGTTCATGTTGGATGGAAATCTAGATGAATGGTTGCACTATTCAGCTCAAAGAGTGGTTGGGGCCCCAACAGTGCAGCTACATTTGAATCTTCTTGAAAGGGTAAATATTGCCATTGACGTAGCTAGTGCTCTGGATTACTTGCACAATCGCTTTCACGTCCCAATAGTTCACTGTGATTTGAAGCCGAGTAATGTTCTCCTAGAACATGACATGACTGCCTGTGTTTGTGATTTTGGGTTAGCAACCTACCTCCCAGATACTTCTTGTCCACTTCCTTCAGTACAGAACCCTTCCAATTCGATAAGGGGTACCATTGGCTATATTGCCCCAGAATATGGCATGGGAAGTGCGGTGTCAACATATGGGGACGTATATAGCTATGGAATCCTGTTACTGGAGATGCTTACTGGTAAGAGGCCAACAGACAACATGTTTAGAGATGACAAGAACTTGCACAACTTTGTTCTGATGGCTTTGCCTGAACATGTGAAAGAAATATGTGATCCGGTGCTTCTTCAAGAAAAGGAAAGCAGCACTAGTACAAATCCCGCAAGCAATAGGAATGATGTCCAAAATGATGAAACACAGAGAGTTGAAGAGTGCCTTATTTCCATTGCTAGGATAGGAGTTGCTTGTTCTGTGCATTTGCCCAAAGCGCGAATGGAGATTGGGGAAGTTTTAGCTGAATTACGTGTGATAAGGGATGTACTGACTGGAACCGGGATGCCTATAGAGCATATGATCACTGCCTAA

Protein Analysis

1045

Amino Acids

115.14

Weight (kDa)

6.26

Isoelectric Point (pI)

41.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 36 - 73 2.1e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 80 - 161 2.4e-06 Leucine-rich repeat region
LRR_14 PF23598 146 - 353 4.6e-09 Leucine-rich repeat region
LRR_14 PF23598 418 - 604 2.2e-06 Leucine-rich repeat region
LRR_8 PF13855 448 - 507 1e-05 Leucine rich repeat
Pkinase PF00069 716 - 948 9.8e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 718 - 942 8e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 710, 2693
AccB1I GGYRCC 4 cut(s) 347, 710, 2304, 2693
AccB7I CCANNNNNTGG 1 cut(s) 2720
AccII CGCG 1 cut(s) 3043
AciI CCGC 9 cut(s) 219, 652, 805, 1161, 1388, 1853, 2331, 2735, 2934
AclWI GGATC 3 cut(s) 143, 917, 2882
AcoI YGGCCR 2 cut(s) 220, 1399
AcsI RAATTY 6 cut(s) 567, 603, 1246, 1783, 2152, 2363
AcuI CTGAAG 4 cut(s) 156, 2055, 2229, 2646
AfiI CCNNNNNNNGG 9 cut(s) 271, 293, 658, 1198, 1829, 2314, 2720, 2779, 3003
AflII CTTAAG 1 cut(s) 673
AflIII ACRYGT 5 cut(s) 1659, 1888, 2814, 2869, 3076
AgeI ACCGGT 1 cut(s) 1448
AhlI ACTAGT 2 cut(s) 1492, 2921
AjiI CACGTC 2 cut(s) 1889, 2542
AjnI CCWGG 1 cut(s) 170
Alw21I GWGCWC 2 cut(s) 753, 2515
Alw26I GTCTC 4 cut(s) 381, 644, 1130, 1211
AlwI GGATC 3 cut(s) 143, 917, 2882
Ama87I CYCGRG 2 cut(s) 398, 1127
AoxI GGCC 8 cut(s) 75, 220, 802, 1399, 1702, 1998, 2445, 2801
ApaI GGGCCC 1 cut(s) 2449
ApeKI GCWGC 4 cut(s) 382, 1939, 2458, 2916
ApoI RAATTY 6 cut(s) 567, 603, 1246, 1783, 2152, 2363
ArsI GACNNNNNNTTYG 2 cut(s) 2361, 2393
AsiGI ACCGGT 1 cut(s) 1448
Asp700I GAANNNNTTC 4 cut(s) 589, 624, 851, 2363
Asp718I GGTACC 2 cut(s) 710, 2693
AspA2I CCTAGG 1 cut(s) 1931
AspLEI GCGC 1 cut(s) 3043
AspS9I GGNCC 7 cut(s) 114, 250, 802, 860, 1998, 2445, 2446
AsuC2I CCSGG 1 cut(s) 3106
AsuHPI GGTGA 5 cut(s) 431, 1022, 1438, 1610, 2338
AsuII TTCGAA 1 cut(s) 826
AvaI CYCGRG 2 cut(s) 398, 1127
AvaII GGWCC 3 cut(s) 114, 250, 860
AvrII CCTAGG 1 cut(s) 1931
BaeGI GKGCMC 1 cut(s) 2449
BalI TGGCCA 1 cut(s) 1401
BanI GGYRCC 4 cut(s) 347, 710, 2304, 2693
BanII GRGCYC 1 cut(s) 2449
BarI GAAGNNNNNNTAC 2 cut(s) 2226, 2258
BbsI GAAGAC 1 cut(s) 232
Bbv12I GWGCWC 2 cut(s) 753, 2515
BbvI GCAGC 4 cut(s) 369, 1926, 2470, 2928
BceAI ACGGC 1 cut(s) 361
BciT130I CCWGG 1 cut(s) 172
BclI TGATCA 2 cut(s) 63, 3126
BcnI CCSGG 1 cut(s) 3106
BcoDI GTCTC 4 cut(s) 381, 644, 1130, 1211
BcuI ACTAGT 2 cut(s) 1492, 2921
BfmI CTRYAG 2 cut(s) 259, 3114
BfrI CTTAAG 1 cut(s) 673
BglII AGATCT 1 cut(s) 6
BisI GCNGC 7 cut(s) 220, 383, 652, 805, 1940, 2459, 2917
BlnI CCTAGG 1 cut(s) 1931
BlpI GCTNAGC 1 cut(s) 1157
BlsI GCNGC 7 cut(s) 221, 384, 653, 806, 1941, 2460, 2918
BmcAI AGTACT 3 cut(s) 534, 1206, 2235
Bme1390I CCNGG 2 cut(s) 172, 3106
Bme18I GGWCC 3 cut(s) 114, 250, 860
BmeT110I CYCGRG 2 cut(s) 398, 1127
BmgBI CACGTC 2 cut(s) 1889, 2542
BmgT120I GGNCC 7 cut(s) 114, 250, 802, 860, 1998, 2445, 2446
BmrFI CCNGG 2 cut(s) 172, 3106
BmsI GCATC 4 cut(s) 168, 896, 2775, 3099
BpiI GAAGAC 1 cut(s) 232
BpmI CTGGAG 2 cut(s) 290, 2801
Bpu10I CCTNAGC 4 cut(s) 164, 1141, 1615, 1944
Bpu1102I GCTNAGC 1 cut(s) 1157
Bpu14I TTCGAA 1 cut(s) 826
BpuEI CTTGAG 4 cut(s) 322, 342, 664, 2323
BpuMI CCSGG 1 cut(s) 3106
BsaAI YACGTR 1 cut(s) 3077
BsaBI GATNNNNATC 3 cut(s) 65, 990, 2400
BsaI GGTCTC 1 cut(s) 644
BsaJI CCNNGG 5 cut(s) 397, 655, 1536, 1931, 2082
BsaWI WCCGGW 5 cut(s) 929, 1448, 2165, 2307, 2890
Bsc4I CCNNNNNNNGG 9 cut(s) 271, 293, 658, 1198, 1829, 2314, 2720, 2779, 3003
Bse118I RCCGGY 1 cut(s) 1448
Bse1I ACTGG 8 cut(s) 507, 712, 1047, 1509, 2328, 2784, 2797, 3103
Bse3DI GCAATG 1 cut(s) 2997
Bse8I GATNNNNATC 3 cut(s) 65, 990, 2400
BseBI CCWGG 1 cut(s) 172
BseDI CCNNGG 5 cut(s) 397, 655, 1536, 1931, 2082
BseJI GATNNNNATC 3 cut(s) 65, 990, 2400
BseLI CCNNNNNNNGG 9 cut(s) 271, 293, 658, 1198, 1829, 2314, 2720, 2779, 3003
BseMI GCAATG 1 cut(s) 2997
BseMII CTCAG 4 cut(s) 80, 325, 1640, 1910
BseNI ACTGG 8 cut(s) 507, 712, 1047, 1509, 2328, 2784, 2797, 3103
BseRI GAGGAG 1 cut(s) 1181
BseSI GKGCMC 1 cut(s) 2449
BseX3I CGGCCG 1 cut(s) 220
BseXI GCAGC 4 cut(s) 369, 1926, 2470, 2928
BseYI CCCAGC 1 cut(s) 891
BsgI GTGCAG 2 cut(s) 1609, 2477
Bsh1236I CGCG 1 cut(s) 3043
Bsh1285I CGRYCG 1 cut(s) 223
BshFI GGCC 8 cut(s) 77, 222, 804, 1401, 1704, 2000, 2447, 2803
BshNI GGYRCC 4 cut(s) 347, 710, 2304, 2693
BshTI ACCGGT 1 cut(s) 1448
BsiEI CGRYCG 1 cut(s) 223
BsiHKAI GWGCWC 2 cut(s) 753, 2515
BsiHKCI CYCGRG 2 cut(s) 398, 1127
BsiSI CCGG 6 cut(s) 930, 1449, 2166, 2308, 2891, 3105
BslFI GGGAC 6 cut(s) 416, 1634, 1684, 1902, 2528, 2765
BslI CCNNNNNNNGG 9 cut(s) 271, 293, 658, 1198, 1829, 2314, 2720, 2779, 3003
BsmAI GTCTC 4 cut(s) 381, 644, 1130, 1211
BsmFI GGGAC 6 cut(s) 416, 1634, 1684, 1902, 2528, 2765
BsmI GAATGC 1 cut(s) 1167
BsnI GGCC 8 cut(s) 77, 222, 804, 1401, 1704, 2000, 2447, 2803
Bso31I GGTCTC 1 cut(s) 644
BsoBI CYCGRG 2 cut(s) 398, 1127
Bsp119I TTCGAA 1 cut(s) 826
Bsp120I GGGCCC 1 cut(s) 2445
Bsp1286I GDGCHC 3 cut(s) 753, 2449, 2515
Bsp1407I TGTACA 1 cut(s) 1272
Bsp1720I GCTNAGC 1 cut(s) 1157
Bsp19I CCATGG 1 cut(s) 1536
BspACI CCGC 9 cut(s) 219, 652, 805, 1161, 1388, 1853, 2331, 2735, 2934
BspANI GGCC 8 cut(s) 77, 222, 804, 1401, 1704, 2000, 2447, 2803
BspCNI CTCAG 4 cut(s) 81, 324, 1641, 1909
BspFNI CGCG 1 cut(s) 3043
BspPI GGATC 3 cut(s) 143, 917, 2882
BspT104I TTCGAA 1 cut(s) 826
BspT107I GGYRCC 4 cut(s) 347, 710, 2304, 2693
BspTI CTTAAG 1 cut(s) 673
BspTNI GGTCTC 1 cut(s) 644
BsrDI GCAATG 1 cut(s) 2997
BsrFI RCCGGY 1 cut(s) 1448
BsrGI TGTACA 1 cut(s) 1272
BsrI ACTGG 8 cut(s) 507, 712, 1047, 1509, 2328, 2784, 2797, 3103
BssAI RCCGGY 1 cut(s) 1448
BssECI CCNNGG 5 cut(s) 397, 655, 1536, 1931, 2082
BssT1I CCWWGG 4 cut(s) 655, 1536, 1931, 2082
Bst2UI CCWGG 1 cut(s) 172
Bst4CI ACNGT 5 cut(s) 51, 114, 244, 2455, 2558
Bst6I CTCTTC 4 cut(s) 85, 792, 1033, 2976
BstAFI CTTAAG 1 cut(s) 673
BstAUI TGTACA 1 cut(s) 1272
BstBAI YACGTR 1 cut(s) 3077
BstBI TTCGAA 1 cut(s) 826
BstC8I GCNNGC 6 cut(s) 123, 266, 1950, 1974, 2335, 2938
BstDSI CCRYGG 1 cut(s) 1536
BstEII GGTNACC 1 cut(s) 2326
BstFNI CGCG 1 cut(s) 3043
BstHHI GCGC 1 cut(s) 3043
BstMAI GTCTC 4 cut(s) 381, 644, 1130, 1211
BstMCI CGRYCG 1 cut(s) 223
BstMWI GCNNNNNNNGC 5 cut(s) 165, 345, 1945, 3040, 3118
BstNI CCWGG 1 cut(s) 172
BstNSI RCATGY 3 cut(s) 1663, 2818, 2873
BstPI GGTNACC 1 cut(s) 2326
BstSCI CCNGG 2 cut(s) 170, 3104
BstSFI CTRYAG 2 cut(s) 259, 3114
BstSLI GKGCMC 1 cut(s) 2449
BstUI CGCG 1 cut(s) 3043
BstV1I GCAGC 4 cut(s) 369, 1926, 2470, 2928
BstV2I GAAGAC 1 cut(s) 232
BstX2I RGATCY 2 cut(s) 6, 909
BstXI CCANNNNNNTGG 2 cut(s) 779, 1523
BstYI RGATCY 2 cut(s) 6, 909
BstZI CGGCCG 1 cut(s) 220
BsuRI GGCC 8 cut(s) 77, 222, 804, 1401, 1704, 2000, 2447, 2803
BtgI CCRYGG 1 cut(s) 1536
BtrI CACGTC 2 cut(s) 1889, 2542
BtsI GCAGTG 1 cut(s) 3129
BtsIMutI CAGTG 5 cut(s) 151, 500, 2460, 2554, 3129
Cac8I GCNNGC 6 cut(s) 123, 266, 1950, 1974, 2335, 2938
CfoI GCGC 1 cut(s) 3043
Cfr10I RCCGGY 1 cut(s) 1448
Cfr13I GGNCC 7 cut(s) 114, 250, 802, 860, 1998, 2445, 2446
CspAI ACCGGT 1 cut(s) 1448
DraI TTTAAA 1 cut(s) 130
EaeI YGGCCR 2 cut(s) 220, 1399
EagI CGGCCG 1 cut(s) 220
Eam1104I CTCTTC 4 cut(s) 85, 792, 1033, 2976
EarI CTCTTC 4 cut(s) 85, 792, 1033, 2976
EclXI CGGCCG 1 cut(s) 220
Eco130I CCWWGG 4 cut(s) 655, 1536, 1931, 2082
Eco147I AGGCCT 1 cut(s) 1704
Eco24I GRGCYC 1 cut(s) 2449
Eco31I GGTCTC 1 cut(s) 644
Eco47I GGWCC 3 cut(s) 114, 250, 860
Eco52I CGGCCG 1 cut(s) 220
Eco57I CTGAAG 4 cut(s) 156, 2055, 2229, 2646
Eco88I CYCGRG 2 cut(s) 398, 1127
Eco91I GGTNACC 1 cut(s) 2326
EcoO109I RGGNCCY 2 cut(s) 2445, 2446
EcoO65I GGTNACC 1 cut(s) 2326
EcoRI GAATTC 1 cut(s) 2363
EcoRII CCWGG 1 cut(s) 170
EcoT14I CCWWGG 4 cut(s) 655, 1536, 1931, 2082
EcoT22I ATGCAT 3 cut(s) 17, 889, 1960
EcoT38I GRGCYC 1 cut(s) 2449
ErhI CCWWGG 4 cut(s) 655, 1536, 1931, 2082
FalI AAGNNNNNCTT 2 cut(s) 2973, 3005
FaqI GGGAC 6 cut(s) 416, 1634, 1684, 1902, 2528, 2765
FauI CCCGC 1 cut(s) 2941
FauNDI CATATG 2 cut(s) 2746, 3123
FbaI TGATCA 2 cut(s) 63, 3126
Fnu4HI GCNGC 7 cut(s) 220, 383, 652, 805, 1940, 2459, 2917
FriOI GRGCYC 1 cut(s) 2449
Fsp4HI GCNGC 7 cut(s) 220, 383, 652, 805, 1940, 2459, 2917
GlaI GCGC 1 cut(s) 3042
GluI GCNGC 7 cut(s) 220, 383, 652, 805, 1940, 2459, 2917
GsaI CCCAGC 1 cut(s) 895
GsuI CTGGAG 2 cut(s) 290, 2801
HaeIII GGCC 8 cut(s) 77, 222, 804, 1401, 1704, 2000, 2447, 2803
HapII CCGG 6 cut(s) 930, 1449, 2166, 2308, 2891, 3105
HhaI GCGC 1 cut(s) 3043
Hin6I GCGC 1 cut(s) 3041
HinP1I GCGC 1 cut(s) 3041
HincII GTYRAC 1 cut(s) 2742
HindII GTYRAC 1 cut(s) 2742
HindIII AAGCTT 4 cut(s) 524, 670, 1612, 2370
HpaII CCGG 6 cut(s) 930, 1449, 2166, 2308, 2891, 3105
HphI GGTGA 5 cut(s) 431, 1022, 1438, 1610, 2338
Hpy166II GTNNAC 6 cut(s) 1478, 1886, 1892, 2554, 2654, 2742
Hpy8I GTNNAC 6 cut(s) 1478, 1886, 1892, 2554, 2654, 2742
HpyAV CCTTC 6 cut(s) 801, 1140, 1715, 1783, 2670, 2685
HpyCH4III ACNGT 5 cut(s) 51, 114, 244, 2455, 2558
HpyCH4IV ACGT 5 cut(s) 1888, 2502, 2541, 2754, 3076
HpyF10VI GCNNNNNNNGC 5 cut(s) 165, 345, 1945, 3040, 3118
HpySE526I ACGT 5 cut(s) 1888, 2502, 2541, 2754, 3076
HspAI GCGC 1 cut(s) 3041
KpnI GGTACC 2 cut(s) 714, 2697
Ksp22I TGATCA 2 cut(s) 63, 3126
LmnI GCTCC 2 cut(s) 173, 2037
Lsp1109I GCAGC 4 cut(s) 369, 1926, 2470, 2928
LweI GCATC 4 cut(s) 168, 896, 2775, 3099
MaeII ACGT 5 cut(s) 1888, 2502, 2541, 2754, 3076
MaeIII GTNAC 9 cut(s) 238, 419, 1010, 1488, 1511, 1526, 1727, 2326, 2775
MfeI CAATTG 1 cut(s) 1039
MflI RGATCY 2 cut(s) 6, 909
MhlI GDGCHC 3 cut(s) 753, 2449, 2515
MlsI TGGCCA 1 cut(s) 1401
MluNI TGGCCA 1 cut(s) 1401
MlyI GAGTC 3 cut(s) 246, 1402, 2072
MmeI TCCRAC 2 cut(s) 210, 2373
Mox20I TGGCCA 1 cut(s) 1401
Mph1103I ATGCAT 3 cut(s) 17, 889, 1960
MroXI GAANNNNTTC 4 cut(s) 589, 624, 851, 2363
MscI TGGCCA 1 cut(s) 1401
MslI CAYNNNNRTG 4 cut(s) 20, 758, 1521, 1535
Msp20I TGGCCA 1 cut(s) 1401
MspA1I CMGCKG 1 cut(s) 268
MspCI CTTAAG 1 cut(s) 673
MspI CCGG 6 cut(s) 930, 1449, 2166, 2308, 2891, 3105
MspR9I CCNGG 2 cut(s) 172, 3106
MunI CAATTG 1 cut(s) 1039
Mva1269I GAATGC 1 cut(s) 1167
MvaI CCWGG 1 cut(s) 172
MvnI CGCG 1 cut(s) 3043
MwoI GCNNNNNNNGC 5 cut(s) 165, 345, 1945, 3040, 3118
NciI CCSGG 1 cut(s) 3106
NcoI CCATGG 1 cut(s) 1536
NdeI CATATG 2 cut(s) 2746, 3123
NmeAIII GCCGAG 2 cut(s) 358, 2595
NmuCI GTSAC 5 cut(s) 238, 419, 1010, 1488, 2326
NsiI ATGCAT 3 cut(s) 17, 889, 1960
NspI RCATGY 3 cut(s) 1663, 2818, 2873
NspV TTCGAA 1 cut(s) 826
PaeR7I CTCGAG 1 cut(s) 1127
PceI AGGCCT 1 cut(s) 1704
PciI ACATGT 3 cut(s) 1659, 2814, 2869
PcsI WCGNNNNNNNCGW 1 cut(s) 385
PctI GAATGC 1 cut(s) 1167
PdmI GAANNNNTTC 4 cut(s) 589, 624, 851, 2363
PflMI CCANNNNNTGG 1 cut(s) 2720
PfoI TCCNGGA 1 cut(s) 170
PinAI ACCGGT 1 cut(s) 1448
PkrI GCNGC 7 cut(s) 221, 384, 653, 806, 1941, 2460, 2918
PleI GAGTC 3 cut(s) 245, 1401, 2071
PpsI GAGTC 3 cut(s) 245, 1401, 2071
Ppu21I YACGTR 1 cut(s) 3077
PscI ACATGT 3 cut(s) 1659, 2814, 2869
Psp6I CCWGG 1 cut(s) 170
PspEI GGTNACC 1 cut(s) 2326
PspFI CCCAGC 1 cut(s) 891
PspGI CCWGG 1 cut(s) 170
PspOMI GGGCCC 1 cut(s) 2445
PspPI GGNCC 7 cut(s) 114, 250, 802, 860, 1998, 2445, 2446
PsrI GAACNNNNNNTAC 2 cut(s) 2161, 2193
PsuI RGATCY 2 cut(s) 6, 909
PvuII CAGCTG 1 cut(s) 268
RseI CAYNNNNRTG 4 cut(s) 20, 758, 1521, 1535
SatI GCNGC 7 cut(s) 220, 383, 652, 805, 1940, 2459, 2917
Sau96I GGNCC 7 cut(s) 114, 250, 802, 860, 1998, 2445, 2446
ScaI AGTACT 3 cut(s) 534, 1206, 2235
SchI GAGTC 3 cut(s) 246, 1402, 2072
ScrFI CCNGG 2 cut(s) 172, 3106
SduI GDGCHC 3 cut(s) 753, 2449, 2515
SfaNI GCATC 4 cut(s) 168, 896, 2775, 3099
SfcI CTRYAG 2 cut(s) 259, 3114
Sfr274I CTCGAG 1 cut(s) 1127
SfuI TTCGAA 1 cut(s) 826
SinI GGWCC 3 cut(s) 114, 250, 860
SlaI CTCGAG 1 cut(s) 1127
SmiMI CAYNNNNRTG 4 cut(s) 20, 758, 1521, 1535
SmlI CTYRAG 6 cut(s) 301, 357, 643, 673, 1127, 2338
SmoI CTYRAG 6 cut(s) 301, 357, 643, 673, 1127, 2338
SpeI ACTAGT 2 cut(s) 1492, 2921
SseBI AGGCCT 1 cut(s) 1704
SsiI CCGC 9 cut(s) 219, 652, 805, 1161, 1388, 1853, 2331, 2735, 2934
SspI AATATT 4 cut(s) 625, 813, 1640, 2491
StuI AGGCCT 1 cut(s) 1704
StyD4I CCNGG 2 cut(s) 170, 3104
StyI CCWWGG 4 cut(s) 655, 1536, 1931, 2082
TaaI ACNGT 5 cut(s) 51, 114, 244, 2455, 2558
TaiI ACGT 5 cut(s) 1891, 2505, 2544, 2757, 3079
TaqI TCGA 7 cut(s) 370, 826, 1128, 1215, 2199, 2252, 2684
TatI WGTACW 8 cut(s) 532, 1204, 1272, 2022, 2233, 2665, 2924, 3091
TauI GCSGC 3 cut(s) 222, 654, 807
TscAI CASTG 5 cut(s) 151, 507, 2460, 2561, 3136
TseFI GTSAC 5 cut(s) 238, 419, 1010, 1488, 2326
TseI GCWGC 4 cut(s) 382, 1939, 2458, 2916
Tsp45I GTSAC 5 cut(s) 238, 419, 1010, 1488, 2326
TspGWI ACGGA 1 cut(s) 1463
TspRI CASTG 5 cut(s) 151, 507, 2460, 2561, 3136
Van91I CCANNNNNTGG 1 cut(s) 2720
Vha464I CTTAAG 1 cut(s) 673
VpaK11BI GGWCC 3 cut(s) 114, 250, 860
XapI RAATTY 6 cut(s) 567, 603, 1246, 1783, 2152, 2363
XbaI TCTAGA 3 cut(s) 1633, 2261, 2404
XceI RCATGY 3 cut(s) 1663, 2818, 2873
XcmI CCANNNNNNNNNTGG 1 cut(s) 3043
XhoI CTCGAG 1 cut(s) 1127
XmaJI CCTAGG 1 cut(s) 1931
XmnI GAANNNNTTC 4 cut(s) 589, 624, 851, 2363
ZrmI AGTACT 3 cut(s) 534, 1206, 2235
Zsp2I ATGCAT 3 cut(s) 17, 889, 1960
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.