RLG00000029403
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
38176717 .. 38179149
2433 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029403

Sequence Viewer

Length: 1854 bp
ATGGGCGAAAACAACTTCACAGGTAGCATCCCTGCAGATATTGGGAAAGCTTCAAAGCTAGGGGAAATTTATCTTGGGAACAACATATTATACGGGAGCATACCTTCTTCTCTTGGAAATTTAACAGGGTTAACCATTCTTCGCTTGCCAGGAAATAATCTCAATGGCAGCATCCCTTCAAGCCTAGGAGAATGTCACGAGTTGCTACTCTTGGATCTTTCTCAAAATAACTTAGATGGCAGAATACCTCAACAATTACTTATTGGTCTCCTCTCTTTATCAATTTCTTTAAACTTGTCAACAAACCACTTTACTGGTTCCCTTCCCGTTGAGATCGGAAAGTTGAATCATCTCGGTGCACTCGATATTTCTTACAACATGTTATCAGGAAAACTTCCTAGTAGCCTCGGTAGTTGTGAGAGTTTGGAAGTCCTACACTTACAAGGTAACTTTTTGGAAGGGCTCATTCCTTCATCTATGAAGGAATTGAGAGGGATTCGAGATGTAGACCTATCACTCAATAATTTGTCAGGAGATGTTCCACAGTTTTTCGAGCACTTTGGAAACCTGGAGAATCTAAACCTATCCTTTAATCAGTTTTGGGGAGTAGTTCCAACAGGCGGTGTTTTTAGGAATGCAAGTGCGACTTCAGTTGCTGGAAACACAAGACTCTGTGGCGGTATTGCTAATCTTCGACTTCCTGTGTGCAAGCTTAAAGAGTCTAAAGGAGGAGAATTGTCTCGTAGAATGAAACTAATGATCTCTTTAGTTTCCGGGTTCACTTTGTTGGGACTGGCTGTAGTGCTTGCTCTTTTCCTTCTTCGTAAGAAAAGGAAAGAAACTGAAGCAAGCACTTTTGAGAACTCCATCATGCAAGTTTCATATGCTACTCTTCTAAAAGCTACTGACGGGTTCACTTCAGCTAATTTGATTGGTGTGGGTGCTTTTGGGTCTGTTTACAAAGGAATTCTTGGGGATGATAGAGTTGTTGTCGCTGTGAAGGTGCTTAACATGTTACACCGGGGAGCATCTAAGAGTTTCATGGCCGAATGTGAGGCATTGAGAAATATCAGGCATCGGAATCTGGTCAAGATCTTAACTGCATGTTCAAGTATTGATTTCAGCGGCACTGTTTTCAAGGCTCTTGTTTATGAGTTCATGGAGAACGGTAGCTTGGAGGATTGGTTGCATCCATCCACTGGAAATGAAGAGCTGATAGAAGCACCCAAAAGTTTAACTCTTGTTCAGAGGCTCGACATTGCCATTGATATTGCTTGTGCATTGGATTATCTTCACAATCATTGTGAAGCACCAATAGTTCATTGTGATCTCAAGCCAAGTAATGTTCTTTTGGACAAAGATTTGACTGGACATGTTTCTGACTTTGGGCTGGCAAGGTTTCGCTTGGAACCAACCAACATTTCTAGAAATCAATCAAGCTCCATCGGAATCAGAGGATCAGTTGGTTATGCTGCTCCAGAGTATGGTATGGGAAGTGAAGTTTCAACATATGGGGATGTCTACAGCTTTGGCATTCTCTTGTTAGAAATGTTTACAGGGAAGAAACCCACTGATCACATGTTCAGTGATGGCTTCAATCTTCATTATTATGTGAAGACAGCTCTCCCTAAACGTGTTGCAGACATTGCAGATTCACTAATTCTTCAAGAAGGCAATATCAATGTTAAGGAACCTCCCAACCTCTCGAGCTTGAGAGCACAGAAAATTGAAGAGTGCTTGACTTTGATATTTGGAATTGGAATTGCCTGTTCGGTTGAATCTCCAACAACCAGAAAAGATATCAGTGATGTTGCATCTGAATTGCACTCAATTAGGGATAATCTTCTTTACTAG

Protein Analysis

618

Amino Acids

66.87

Weight (kDa)

5.96

Isoelectric Point (pI)

35.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 60 - 194 6e-09 Leucine-rich repeat region
LRR_8 PF13855 141 - 200 4.3e-08 Leucine rich repeat
Pkinase PF00069 307 - 529 2e-36 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 309 - 530 1.9e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 1199, 1484
AccI GTMKAC 2 cut(s) 507, 1521
AciI CCGC 3 cut(s) 621, 678, 1125
AclWI GGATC 2 cut(s) 222, 1465
AcoI YGGCCR 1 cut(s) 1044
AcsI RAATTY 3 cut(s) 66, 118, 966
AcuI CTGAAG 3 cut(s) 633, 864, 903
AfiI CCNNNNNNNGG 3 cut(s) 620, 1199, 1484
AflIII ACRYGT 5 cut(s) 378, 1011, 1372, 1578, 1633
AjnI CCWGG 2 cut(s) 148, 567
AjuI GAANNNNNNNTTGG 6 cut(s) 57, 89, 1157, 1189, 1405, 1437
Alw21I GWGCWC 3 cut(s) 361, 558, 1720
Alw26I GTCTC 2 cut(s) 272, 744
Alw44I GTGCAC 1 cut(s) 357
AlwI GGATC 2 cut(s) 222, 1465
AlwNI CAGNNNCTG 1 cut(s) 656
Ama87I CYCGRG 1 cut(s) 1705
AoxI GGCC 1 cut(s) 1044
ApaLI GTGCAC 1 cut(s) 357
ApeKI GCWGC 2 cut(s) 168, 1472
ApoI RAATTY 3 cut(s) 66, 118, 966
AspA2I CCTAGG 1 cut(s) 184
AsuC2I CCSGG 2 cut(s) 775, 1022
AvaI CYCGRG 1 cut(s) 1705
AvrII CCTAGG 1 cut(s) 184
BaeGI GKGCMC 1 cut(s) 361
BanII GRGCYC 1 cut(s) 465
BauI CACGAG 1 cut(s) 197
BbsI GAAGAC 1 cut(s) 1622
Bbv12I GWGCWC 3 cut(s) 361, 558, 1720
BbvI GCAGC 2 cut(s) 180, 1459
BccI CCATC 5 cut(s) 230, 875, 1201, 1451, 1583
BciT130I CCWGG 2 cut(s) 150, 569
BclI TGATCA 1 cut(s) 1573
BcnI CCSGG 2 cut(s) 775, 1022
BcoDI GTCTC 2 cut(s) 272, 744
BfaI CTAG 5 cut(s) 59, 185, 399, 1425, 1852
BfmI CTRYAG 3 cut(s) 33, 798, 1522
BglII AGATCT 1 cut(s) 1092
BisI GCNGC 3 cut(s) 169, 1126, 1473
BlnI CCTAGG 1 cut(s) 184
BlsI GCNGC 3 cut(s) 170, 1127, 1474
Bme1390I CCNGG 4 cut(s) 150, 569, 775, 1022
BmeT110I CYCGRG 1 cut(s) 1705
BmiI GGNNCC 3 cut(s) 319, 1410, 1692
BmrFI CCNGG 4 cut(s) 150, 569, 775, 1022
BmsI GCATC 6 cut(s) 36, 180, 1037, 1084, 1198, 1823
BpiI GAAGAC 1 cut(s) 1622
BpmI CTGGAG 2 cut(s) 590, 1461
BpuEI CTTGAG 2 cut(s) 1316, 1732
BpuMI CCSGG 2 cut(s) 775, 1022
BsaI GGTCTC 1 cut(s) 272
BsaJI CCNNGG 3 cut(s) 184, 406, 1021
BsaXI ACNNNNNCTCC 2 cut(s) 1169, 1199
Bsc4I CCNNNNNNNGG 3 cut(s) 620, 1199, 1484
Bse1I ACTGG 4 cut(s) 319, 798, 1204, 1372
Bse3DI GCAATG 2 cut(s) 1257, 1644
BseBI CCWGG 2 cut(s) 150, 569
BseDI CCNNGG 3 cut(s) 184, 406, 1021
BseGI GGATG 6 cut(s) 27, 171, 982, 1189, 1193, 1522
BseLI CCNNNNNNNGG 3 cut(s) 620, 1199, 1484
BseMI GCAATG 2 cut(s) 1257, 1644
BseNI ACTGG 4 cut(s) 319, 798, 1204, 1372
BseRI GAGGAG 2 cut(s) 260, 744
BseSI GKGCMC 1 cut(s) 361
BseXI GCAGC 2 cut(s) 180, 1459
BshFI GGCC 1 cut(s) 1046
BsiHKAI GWGCWC 3 cut(s) 361, 558, 1720
BsiHKCI CYCGRG 1 cut(s) 1705
BsiSI CCGG 2 cut(s) 774, 1021
BslFI GGGAC 1 cut(s) 804
BslI CCNNNNNNNGG 3 cut(s) 620, 1199, 1484
BsmAI GTCTC 2 cut(s) 272, 744
BsmFI GGGAC 1 cut(s) 804
BsmI GAATGC 2 cut(s) 640, 1533
BsnI GGCC 1 cut(s) 1046
Bso31I GGTCTC 1 cut(s) 272
BsoBI CYCGRG 1 cut(s) 1705
Bsp1286I GDGCHC 4 cut(s) 361, 465, 558, 1720
Bsp143I GATC 7 cut(s) 214, 333, 759, 1092, 1327, 1457, 1573
BspACI CCGC 3 cut(s) 621, 678, 1125
BspANI GGCC 1 cut(s) 1046
BspLI GGNNCC 3 cut(s) 319, 1410, 1692
BspMAI CTGCAG 1 cut(s) 37
BspPI GGATC 2 cut(s) 222, 1465
BspQI GCTCTTC 1 cut(s) 1203
BspTNI GGTCTC 1 cut(s) 272
BsrDI GCAATG 2 cut(s) 1257, 1644
BsrI ACTGG 4 cut(s) 319, 798, 1204, 1372
BssECI CCNNGG 3 cut(s) 184, 406, 1021
BssMI GATC 7 cut(s) 214, 333, 759, 1092, 1327, 1457, 1573
BssSI CACGAG 1 cut(s) 197
BssT1I CCWWGG 1 cut(s) 184
Bst2BI CACGAG 1 cut(s) 197
Bst2UI CCWGG 2 cut(s) 150, 569
Bst4CI ACNGT 3 cut(s) 546, 1132, 1169
Bst6I CTCTTC 3 cut(s) 897, 1203, 1725
BstAPI GCANNNNNTGC 1 cut(s) 1646
BstC8I GCNNGC 5 cut(s) 146, 710, 807, 850, 1392
BstDEI CTNAG 2 cut(s) 232, 1032
BstF5I GGATG 6 cut(s) 27, 171, 982, 1189, 1193, 1522
BstKTI GATC 7 cut(s) 217, 336, 762, 1095, 1330, 1460, 1576
BstMAI GTCTC 2 cut(s) 272, 744
BstMBI GATC 7 cut(s) 214, 333, 759, 1092, 1327, 1457, 1573
BstMWI GCNNNNNNNGC 1 cut(s) 1646
BstNI CCWGG 2 cut(s) 150, 569
BstNSI RCATGY 5 cut(s) 382, 1015, 1107, 1376, 1582
BstSCI CCNGG 4 cut(s) 148, 567, 773, 1020
BstSFI CTRYAG 3 cut(s) 33, 798, 1522
BstSLI GKGCMC 1 cut(s) 361
BstV1I GCAGC 2 cut(s) 180, 1459
BstV2I GAAGAC 1 cut(s) 1622
BstX2I RGATCY 2 cut(s) 214, 1092
BstXI CCANNNNNNTGG 1 cut(s) 314
BstYI RGATCY 2 cut(s) 214, 1092
BsuRI GGCC 1 cut(s) 1046
BtsCI GGATG 6 cut(s) 27, 171, 982, 1189, 1193, 1522
BtsIMutI CAGTG 5 cut(s) 1128, 1197, 1569, 1591, 1810
Cac8I GCNNGC 5 cut(s) 146, 710, 807, 850, 1392
CaiI CAGNNNCTG 1 cut(s) 656
CviAII CATG 8 cut(s) 379, 871, 1012, 1042, 1104, 1159, 1373, 1579
DdeI CTNAG 2 cut(s) 232, 1032
DpnI GATC 7 cut(s) 216, 335, 761, 1094, 1329, 1459, 1575
DpnII GATC 7 cut(s) 214, 333, 759, 1092, 1327, 1457, 1573
DraI TTTAAA 1 cut(s) 291
EaeI YGGCCR 1 cut(s) 1044
Eam1104I CTCTTC 3 cut(s) 897, 1203, 1725
EarI CTCTTC 3 cut(s) 897, 1203, 1725
Eco130I CCWWGG 1 cut(s) 184
Eco24I GRGCYC 1 cut(s) 465
Eco31I GGTCTC 1 cut(s) 272
Eco32I GATATC 1 cut(s) 1801
Eco57I CTGAAG 3 cut(s) 633, 864, 903
Eco88I CYCGRG 1 cut(s) 1705
EcoRI GAATTC 1 cut(s) 966
EcoRII CCWGG 2 cut(s) 148, 567
EcoRV GATATC 1 cut(s) 1801
EcoT14I CCWWGG 1 cut(s) 184
EcoT38I GRGCYC 1 cut(s) 465
ErhI CCWWGG 1 cut(s) 184
FaeI CATG 8 cut(s) 382, 874, 1015, 1045, 1107, 1162, 1376, 1582
FalI AAGNNNNNCTT 4 cut(s) 631, 663, 954, 986
FaqI GGGAC 1 cut(s) 804
FatI CATG 8 cut(s) 378, 870, 1011, 1041, 1103, 1158, 1372, 1578
FauNDI CATATG 2 cut(s) 883, 1510
FbaI TGATCA 1 cut(s) 1573
FblI GTMKAC 2 cut(s) 507, 1521
Fnu4HI GCNGC 3 cut(s) 169, 1126, 1473
FokI GGATG 6 cut(s) 14, 158, 989, 1176, 1180, 1529
FriOI GRGCYC 1 cut(s) 465
Fsp4HI GCNGC 3 cut(s) 169, 1126, 1473
FspBI CTAG 5 cut(s) 59, 185, 399, 1425, 1852
GluI GCNGC 3 cut(s) 169, 1126, 1473
GsuI CTGGAG 2 cut(s) 590, 1461
HaeIII GGCC 1 cut(s) 1046
HapII CCGG 2 cut(s) 774, 1021
Hin1II CATG 8 cut(s) 382, 874, 1015, 1045, 1107, 1162, 1376, 1582
HincII GTYRAC 2 cut(s) 132, 300
HindII GTYRAC 2 cut(s) 132, 300
HindIII AAGCTT 2 cut(s) 48, 710
HinfI GANTC 9 cut(s) 346, 496, 574, 669, 719, 1081, 1449, 1652, 1778
HpaI GTTAAC 1 cut(s) 132
HpaII CCGG 2 cut(s) 774, 1021
Hpy166II GTNNAC 9 cut(s) 132, 300, 359, 508, 780, 915, 958, 1522, 1554
Hpy188I TCNGA 7 cut(s) 338, 1080, 1248, 1381, 1448, 1454, 1819
Hpy188III TCNNGA 9 cut(s) 197, 387, 500, 531, 1090, 1425, 1478, 1667, 1705
Hpy8I GTNNAC 9 cut(s) 132, 300, 359, 508, 780, 915, 958, 1522, 1554
HpyAV CCTTC 9 cut(s) 114, 186, 332, 452, 475, 480, 827, 994, 1664
HpyCH4III ACNGT 3 cut(s) 546, 1132, 1169
HpyCH4IV ACGT 1 cut(s) 1633
HpyF10VI GCNNNNNNNGC 1 cut(s) 1646
HpyF3I CTNAG 2 cut(s) 232, 1032
HpySE526I ACGT 1 cut(s) 1633
Hsp92II CATG 8 cut(s) 382, 874, 1015, 1045, 1107, 1162, 1376, 1582
Ksp22I TGATCA 1 cut(s) 1573
KspAI GTTAAC 1 cut(s) 132
Kzo9I GATC 7 cut(s) 214, 333, 759, 1092, 1327, 1457, 1573
LguI GCTCTTC 1 cut(s) 1203
LmnI GCTCC 4 cut(s) 96, 1025, 1445, 1480
Lsp1109I GCAGC 2 cut(s) 180, 1459
LweI GCATC 6 cut(s) 36, 180, 1037, 1084, 1198, 1823
MaeI CTAG 5 cut(s) 59, 185, 399, 1425, 1852
MaeII ACGT 1 cut(s) 1633
MaeIII GTNAC 3 cut(s) 194, 446, 1014
MalI GATC 7 cut(s) 216, 335, 761, 1094, 1329, 1459, 1575
MboI GATC 7 cut(s) 214, 333, 759, 1092, 1327, 1457, 1573
MflI RGATCY 2 cut(s) 214, 1092
MhlI GDGCHC 4 cut(s) 361, 465, 558, 1720
MlyI GAGTC 2 cut(s) 663, 728
MmeI TCCRAC 2 cut(s) 638, 1808
MseI TTAA 9 cut(s) 122, 131, 290, 591, 714, 1008, 1097, 1235, 1686
MslI CAYNNNNRTG 2 cut(s) 354, 1608
MspA1I CMGCKG 1 cut(s) 1125
MspI CCGG 2 cut(s) 774, 1021
MspR9I CCNGG 4 cut(s) 150, 569, 775, 1022
Mva1269I GAATGC 2 cut(s) 640, 1533
MvaI CCWGG 2 cut(s) 150, 569
MwoI GCNNNNNNNGC 1 cut(s) 1646
NciI CCSGG 2 cut(s) 775, 1022
NdeI CATATG 2 cut(s) 883, 1510
NdeII GATC 7 cut(s) 214, 333, 759, 1092, 1327, 1457, 1573
NlaIII CATG 8 cut(s) 382, 874, 1015, 1045, 1107, 1162, 1376, 1582
NlaIV GGNNCC 3 cut(s) 319, 1410, 1692
NmuCI GTSAC 1 cut(s) 194
NspI RCATGY 5 cut(s) 382, 1015, 1107, 1376, 1582
PaeR7I CTCGAG 1 cut(s) 1705
PciI ACATGT 4 cut(s) 378, 1011, 1372, 1578
PciSI GCTCTTC 1 cut(s) 1203
PcsI WCGNNNNNNNCGW 1 cut(s) 360
PctI GAATGC 2 cut(s) 640, 1533
PfeI GAWTC 7 cut(s) 346, 496, 574, 1081, 1449, 1652, 1778
PflMI CCANNNNNTGG 2 cut(s) 1199, 1484
PkrI GCNGC 3 cut(s) 170, 1127, 1474
PleI GAGTC 2 cut(s) 663, 727
PpsI GAGTC 2 cut(s) 663, 727
PscI ACATGT 4 cut(s) 378, 1011, 1372, 1578
Psp6I CCWGG 2 cut(s) 148, 567
PspGI CCWGG 2 cut(s) 148, 567
PspN4I GGNNCC 3 cut(s) 319, 1410, 1692
PstI CTGCAG 1 cut(s) 37
PstNI CAGNNNCTG 1 cut(s) 656
PsuI RGATCY 2 cut(s) 214, 1092
RseI CAYNNNNRTG 2 cut(s) 354, 1608
SapI GCTCTTC 1 cut(s) 1203
SaqAI TTAA 9 cut(s) 122, 131, 290, 591, 714, 1008, 1097, 1235, 1686
SatI GCNGC 3 cut(s) 169, 1126, 1473
Sau3AI GATC 7 cut(s) 214, 333, 759, 1092, 1327, 1457, 1573
SchI GAGTC 2 cut(s) 663, 728
ScrFI CCNGG 4 cut(s) 150, 569, 775, 1022
SduI GDGCHC 4 cut(s) 361, 465, 558, 1720
SfaNI GCATC 6 cut(s) 36, 180, 1037, 1084, 1198, 1823
SfcI CTRYAG 3 cut(s) 33, 798, 1522
Sfr274I CTCGAG 1 cut(s) 1705
SlaI CTCGAG 1 cut(s) 1705
SmiMI CAYNNNNRTG 2 cut(s) 354, 1608
SmlI CTYRAG 3 cut(s) 1331, 1705, 1711
SmoI CTYRAG 3 cut(s) 1331, 1705, 1711
SsiI CCGC 3 cut(s) 621, 678, 1125
SspMI CTAG 5 cut(s) 59, 185, 399, 1425, 1852
StyD4I CCNGG 4 cut(s) 148, 567, 773, 1020
StyI CCWWGG 1 cut(s) 184
TaaI ACNGT 3 cut(s) 546, 1132, 1169
TaiI ACGT 1 cut(s) 1636
TaqI TCGA 6 cut(s) 363, 499, 552, 694, 1254, 1706
TauI GCSGC 1 cut(s) 1128
TfiI GAWTC 7 cut(s) 346, 496, 574, 1081, 1449, 1652, 1778
Tru1I TTAA 9 cut(s) 122, 131, 290, 591, 714, 1008, 1097, 1235, 1686
Tru9I TTAA 9 cut(s) 122, 131, 290, 591, 714, 1008, 1097, 1235, 1686
TscAI CASTG 5 cut(s) 1135, 1204, 1576, 1591, 1810
TseFI GTSAC 1 cut(s) 194
TseI GCWGC 2 cut(s) 168, 1472
Tsp45I GTSAC 1 cut(s) 194
TspDTI ATGAA 9 cut(s) 462, 494, 764, 870, 1030, 1147, 1221, 1310, 1592
TspRI CASTG 5 cut(s) 1135, 1204, 1576, 1591, 1810
Van91I CCANNNNNTGG 2 cut(s) 1199, 1484
VneI GTGCAC 1 cut(s) 357
XapI RAATTY 3 cut(s) 66, 118, 966
XbaI TCTAGA 1 cut(s) 1424
XceI RCATGY 5 cut(s) 382, 1015, 1107, 1376, 1582
XhoI CTCGAG 1 cut(s) 1705
XmaJI CCTAGG 1 cut(s) 184
XmiI GTMKAC 2 cut(s) 507, 1521
XspI CTAG 5 cut(s) 59, 185, 399, 1425, 1852
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.