RLG00000034200
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
38285633 .. 38288747
3115 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034200

Sequence Viewer

Length: 2817 bp
ATGCTGGACTTCAACTCCCAAGGCCTGGCTGGCTCCATATCCCCACACATCGGAAATTTGAGCTTTTTAAGGGAACTTCGCCTCCATAACAATAACTTCACTCAAGAAATTCCTCCACAAATTGGGCAATTGCGTAGGTTGAAGGTACTTGATTTAGAGAATAACTCATTTACTGGCCCTATTCCTGTCAACATATCTAGTTGCTTCAACCTCACCCTTCTCTCTTTCAGTGGCAACAAGCTGGTGGGTGAAATTCCTTCTAGTCTTGGTTTCTTGTCTAAGCTTCAAATACTTGTTTTACAAAATAATAATTTAACTGGAGAAATCCCTCCTTCCTTGGGGAACCTTTCATCTCTTACCGTACTTGCTGCATATAACAACTTCTTGGTGGGGAGCATACCTAGTTCTCTAGGCCAATTGAAAATGTTAACCTATTTCTCGTTGGGCGATAATAAGTTGTCTGGTACCATCCCTCCTTCCATTTACAACCTATCTGCTATTGAAACTTTTTCTATAACGCATAACCAAATTCAGGGGAGCATTCCCTCACACTTGAGCACTGCATTTCCTAACCTCAAGTTCTTCCACATTTGGACGAATGAATTTACTGGGGTCATTCCTTTGTCGATATCCAATGCAACGAGTCTATTGTCGTTCAGTGTTGGAGGTAACAATCTAACAGGACAAGTGCCCAATTTGCAAAATCTTCATAACCTCACAAAGTTCTCTGTCATGTATAATCATCTCGGAAGCGGTAAGCAGGGAGACTTGAGCTTTGTCTCAAAGTTGGTGAATGCCACACAGTTAACACTGTTGGTTTTAGCCTACAACAATTTCGGAGGCACATTGCCCACAGCAATATCCAATCTCTCAACCAGTCTCGAAATGCTTTGGGTTCATGGAAACCAACTACATGGAAGCATCCCAACTGGTTTAGGAAGTCTTGCGAATTTGCAATCGCTCGCTTTGGGCGATAACTCCTTCACAGGTAGCATCCCTGCTGACATTGGGAAGCGTTCAACGCTTGTGGAATTTTTTCTTGAGGACAACCAATTATCAGGAAGCATTCCATCTTCTCTTGGAAATTTAACCATGTTAACCCGCCTTTACTTGCTAGCAAATAATCTTAGCGGCAGCATCCCTTCGAGTCTAGGGAAATGCCACGGGTTGTTGGAATTGGATCTTTCTCAAAATAACCTTAATGGTACAATACCCCATCAACTACTTAGTGGCCTCCTCTACTTATCAATTATTCTCAACTTGTCCAGAAACCACTTTGTTGATTCTCTTCCTGTGCAGATCGGCAAGTTGAGGAATCTAGGTGAACTTGATGTTTCCGAGAACATGTTATCGGGAGAGCTTCCTAATAGCCTCGGTGATTGTCAGAGTTTAGAAGTCCTACAATTGCAAGGAAATTACTTCAAGGGGCTCATTCCATCATCTATGAAGGACTTGAGAGGCCTTCGAGATGTAGACCTTTCTCGAAACAATTTGTCCGGACATATTCCGCAGTTCTTTAAGGGCTTTGGAAACTTGGTGAATCTTAACCTATCCTTCAATCACTTATGGGGGGAAGTGCCAATTGAAGGTGCTTTTAAGAATGCAAGTGCAACATCAGTTGTTGGAAACACCGCACTCTGCGGAGGTATTGCAGAGCTTCGACTTCCTGTGTGCAAATCTGAAGTGTCTAAAGCAAGAGGTTTGTCTCGTACAATAAACATAGTTATGGCTTTAGTATCCGGGTTTACACTGTTGGTAATTGCTGTGGTGCTATCCTTCTTACTTCATCGTAAGAAAAGGAAAGCAATTAGGTTGAGCACTTTGGGGAACTCTTTTTTGCAAGTCTCGTATGCTATGCTCCTAAAAGCAACGGACGGGTTTTCTTCCACTAATTTGATTGGTGAGGGTGGTTTTGGTTCTGTGTACAAAGGAATTCTCGATGGTGATAGAGTTGTCGCTGTAAAGGTGCTTAACATGGTACAAAGGGGAGCTTCAAAGAGTTTCATAGCTGAATGTGAAGCACTGAGAAATATCAGGCATCGAAACCTGGTCAAGATTGTAACTGCATGTTCAAGTATTGATTTTCGTGGAAATGATTTCAAGGCTCTAGTTTATGAATTCATGGAAAATGGGAGCTTAGAAGAGTGGTTGCATCCCTCCACTGGAATTGAAACGATAATAGATGCACCCAAAACTTTAAGTCTTGTCCAGAGGCTTGATATCGCCATTGATGTTGCTTCTGCATTGGATTATCTTCACAATCATTGTCAAACACCAATAGTTCATTGTGATCTCAAACCAAGTAACATCCTTTTGGATAACGAGCTGACTGCACATGTTTCCGACTTTGGACTTGCAAGGTTTCTCTCAAAATTAACTGATAACGTTTCTGGAAATCAATCAAGCTCCATTGGAATAAGAGGATCGGTTGGTTATACTGCTCCAGAGTATGGTATGGGAAGTGAGGTGTCAACATATGGGGATGTGTACAGCTTTGGCATTCTCTTGTTAGAAATGTTTACTAGGAAGAGACCTACTGATCCTATGTTCAGTGACAGCTTGAATCTTCATAACTTTGTGAAGATGGCTCTACCTGAACATGTTGAGGAGATTACAGATTCACAACTTGAAGGAGGCATCACCACTTTTGATGAAGCTCGCAATCAACCAATCACAAGACCACAAAAAATTGAAGAGTGCTTAAAGTTGATATTTGGAATTGGAATTGCAAGTTCTGCTGAATCCCCAACAAATCGAAAGGATATAAGTGATGTTGTATCGGAATTGCACACCGTCAGGAACAATCTTCTTAGTTAA

Protein Analysis

939

Amino Acids

101.7

Weight (kDa)

6.4

Isoelectric Point (pI)

34.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 13 - 76 3.6e-06 Leucine-rich repeat region
LRR_14 PF23598 65 - 148 6.8e-06 Leucine-rich repeat region
LRR_14 PF23598 383 - 516 1.4e-08 Leucine-rich repeat region
LRR_8 PF13855 463 - 522 5.5e-09 Leucine rich repeat
Pkinase PF00069 629 - 861 3.7e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 631 - 849 2.8e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 464
AccB1I GGYRCC 1 cut(s) 464
AccB7I CCANNNNNTGG 3 cut(s) 25, 122, 2450
AccI GTMKAC 1 cut(s) 1473
AccIII TCCGGA 1 cut(s) 1496
AciI CCGC 6 cut(s) 753, 1102, 1131, 1508, 1632, 1641
AclI AACGTT 1 cut(s) 2385
AclWI GGATC 3 cut(s) 1188, 2431, 2534
AcuI CTGAAG 1 cut(s) 1701
AfaI GTAC 8 cut(s) 147, 363, 466, 1207, 1711, 1925, 1980, 2489
AfiI CCNNNNNNNGG 8 cut(s) 25, 50, 122, 338, 532, 1586, 2162, 2450
AflIII ACRYGT 3 cut(s) 1344, 2335, 2599
AjnI CCWGG 2 cut(s) 24, 2046
AloI GAACNNNNNNTCC 2 cut(s) 66, 98
Alw21I GWGCWC 2 cut(s) 560, 1820
Alw26I GTCTC 6 cut(s) 759, 784, 884, 1710, 1849, 2524
AlwI GGATC 3 cut(s) 1188, 2431, 2534
Aor13HI TCCGGA 1 cut(s) 1496
AoxI GGCC 5 cut(s) 22, 175, 412, 1231, 1459
ApeKI GCWGC 2 cut(s) 368, 1134
ArsI GACNNNNNNTTYG 2 cut(s) 758, 790
Asp700I GAANNNNTTC 1 cut(s) 1035
Asp718I GGTACC 1 cut(s) 464
AspS9I GGNCC 1 cut(s) 176
AsuC2I CCSGG 1 cut(s) 1741
AsuHPI GGTGA 9 cut(s) 205, 260, 802, 1334, 1388, 1549, 1913, 1955, 2632
AsuNHI GCTAGC 1 cut(s) 1114
BaeGI GKGCMC 1 cut(s) 693
BanI GGYRCC 1 cut(s) 464
BanII GRGCYC 1 cut(s) 1431
Bbv12I GWGCWC 2 cut(s) 560, 1820
BbvI GCAGC 2 cut(s) 355, 1146
BccI CCATC 6 cut(s) 476, 1078, 1224, 1444, 1934, 2578
BcgI CGANNNNNNTGC 2 cut(s) 2312, 2346
BciT130I CCWGG 2 cut(s) 26, 2048
BciVI GTATCC 1 cut(s) 1747
BcnI CCSGG 1 cut(s) 1741
BcoDI GTCTC 6 cut(s) 759, 784, 884, 1710, 1849, 2524
BfaI CTAG 9 cut(s) 198, 261, 402, 410, 1115, 1151, 1319, 2108, 2523
BfuI GTATCC 1 cut(s) 1747
BglI GCCNNNNNGGC 1 cut(s) 30
BisI GCNGC 3 cut(s) 369, 1132, 1135
BlsI GCNGC 3 cut(s) 370, 1133, 1136
Bme1390I CCNGG 3 cut(s) 26, 1741, 2048
BmgT120I GGNCC 1 cut(s) 176
BmiI GGNNCC 3 cut(s) 34, 344, 466
BmrFI CCNGG 3 cut(s) 26, 1741, 2048
BmrI ACTGGG 1 cut(s) 618
BmsI GCATC 7 cut(s) 930, 1002, 1146, 2047, 2161, 2173, 2646
BmtI GCTAGC 1 cut(s) 1118
BmuI ACTGGG 1 cut(s) 618
BplI GAGNNNNNCTC 2 cut(s) 149, 181
BpmI CTGGAG 2 cut(s) 339, 2427
BpuEI CTTGAG 6 cut(s) 87, 560, 574, 790, 1061, 1474
BpuMI CCSGG 1 cut(s) 1741
BsaI GGTCTC 1 cut(s) 2524
BsaJI CCNNGG 4 cut(s) 19, 336, 1162, 1372
BsaWI WCCGGW 1 cut(s) 1496
BsaXI ACNNNNNCTCC 5 cut(s) 29, 66, 96, 457, 487
Bsc4I CCNNNNNNNGG 8 cut(s) 25, 50, 122, 338, 532, 1586, 2162, 2450
Bse1I ACTGG 6 cut(s) 178, 322, 613, 876, 934, 2167
Bse3DI GCAATG 1 cut(s) 845
BseAI TCCGGA 1 cut(s) 1496
BseBI CCWGG 2 cut(s) 26, 2048
BseDI CCNNGG 4 cut(s) 19, 336, 1162, 1372
BseGI GGATG 7 cut(s) 468, 921, 993, 1137, 2152, 2307, 2488
BseLI CCNNNNNNNGG 8 cut(s) 25, 50, 122, 338, 532, 1586, 2162, 2450
BseMI GCAATG 1 cut(s) 845
BseMII CTCAG 1 cut(s) 2015
BseNI ACTGG 6 cut(s) 178, 322, 613, 876, 934, 2167
BseRI GAGGAG 2 cut(s) 1226, 2621
BseSI GKGCMC 1 cut(s) 693
BseXI GCAGC 2 cut(s) 355, 1146
BsgI GTGCAG 2 cut(s) 1316, 2316
BshFI GGCC 5 cut(s) 24, 177, 414, 1233, 1461
BshNI GGYRCC 1 cut(s) 464
BsiHKAI GWGCWC 2 cut(s) 560, 1820
BsiSI CCGG 2 cut(s) 1497, 1740
BslI CCNNNNNNNGG 8 cut(s) 25, 50, 122, 338, 532, 1586, 2162, 2450
BsmAI GTCTC 6 cut(s) 759, 784, 884, 1710, 1849, 2524
BsmI GAATGC 5 cut(s) 540, 799, 1065, 1606, 2499
BsnI GGCC 5 cut(s) 24, 177, 414, 1233, 1461
Bso31I GGTCTC 1 cut(s) 2524
Bsp1286I GDGCHC 4 cut(s) 560, 693, 1431, 1820
Bsp13I TCCGGA 1 cut(s) 1496
Bsp1407I TGTACA 2 cut(s) 1923, 2487
Bsp143I GATC 5 cut(s) 1180, 1299, 2290, 2423, 2539
BspACI CCGC 6 cut(s) 753, 1102, 1131, 1508, 1632, 1641
BspANI GGCC 5 cut(s) 24, 177, 414, 1233, 1461
BspCNI CTCAG 1 cut(s) 2016
BspEI TCCGGA 1 cut(s) 1496
BspLI GGNNCC 3 cut(s) 34, 344, 466
BspOI GCTAGC 1 cut(s) 1118
BspPI GGATC 3 cut(s) 1188, 2431, 2534
BspT107I GGYRCC 1 cut(s) 464
BspTNI GGTCTC 1 cut(s) 2524
BsrDI GCAATG 1 cut(s) 845
BsrGI TGTACA 2 cut(s) 1923, 2487
BsrI ACTGG 6 cut(s) 178, 322, 613, 876, 934, 2167
BssECI CCNNGG 4 cut(s) 19, 336, 1162, 1372
BssMI GATC 5 cut(s) 1180, 1299, 2290, 2423, 2539
BssT1I CCWWGG 2 cut(s) 19, 336
Bst2UI CCWGG 2 cut(s) 26, 2048
Bst4CI ACNGT 5 cut(s) 361, 804, 813, 1752, 2794
Bst6I CTCTTC 4 cut(s) 1293, 2136, 2522, 2688
BstAPI GCANNNNNTGC 1 cut(s) 2735
BstAUI TGTACA 2 cut(s) 1923, 2487
BstC8I GCNNGC 4 cut(s) 31, 963, 1116, 2659
BstDEI CTNAG 6 cut(s) 279, 1127, 1226, 2024, 2137, 2810
BstDSI CCRYGG 1 cut(s) 1162
BstF5I GGATG 7 cut(s) 468, 921, 993, 1137, 2152, 2307, 2488
BstKTI GATC 5 cut(s) 1183, 1302, 2293, 2426, 2542
BstMAI GTCTC 6 cut(s) 759, 784, 884, 1710, 1849, 2524
BstMBI GATC 5 cut(s) 1180, 1299, 2290, 2423, 2539
BstMWI GCNNNNNNNGC 4 cut(s) 30, 697, 1021, 2735
BstNI CCWGG 2 cut(s) 26, 2048
BstNSI RCATGY 4 cut(s) 1348, 2070, 2339, 2603
BstSCI CCNGG 3 cut(s) 24, 1739, 2046
BstSLI GKGCMC 1 cut(s) 693
BstV1I GCAGC 2 cut(s) 355, 1146
BstX2I RGATCY 1 cut(s) 1180
BstXI CCANNNNNNTGG 1 cut(s) 914
BstYI RGATCY 1 cut(s) 1180
BsuI GTATCC 1 cut(s) 1747
BsuRI GGCC 5 cut(s) 24, 177, 414, 1233, 1461
BtgI CCRYGG 1 cut(s) 1162
BtsCI GGATG 7 cut(s) 468, 921, 993, 1137, 2152, 2307, 2488
BtsI GCAGTG 1 cut(s) 558
BtsIMutI CAGTG 8 cut(s) 235, 558, 664, 809, 1748, 2021, 2160, 2557
Cac8I GCNNGC 4 cut(s) 31, 963, 1116, 2659
Cfr13I GGNCC 1 cut(s) 176
CsiI ACCWGGT 1 cut(s) 2046
Csp6I GTAC 8 cut(s) 146, 362, 465, 1206, 1710, 1924, 1979, 2488
CspCI CAANNNNNGTGG 4 cut(s) 1008, 1043, 2149, 2184
CviQI GTAC 8 cut(s) 146, 362, 465, 1206, 1710, 1924, 1979, 2488
DdeI CTNAG 6 cut(s) 279, 1127, 1226, 2024, 2137, 2810
DpnI GATC 5 cut(s) 1182, 1301, 2292, 2425, 2541
DpnII GATC 5 cut(s) 1180, 1299, 2290, 2423, 2539
Eam1104I CTCTTC 4 cut(s) 1293, 2136, 2522, 2688
EarI CTCTTC 4 cut(s) 1293, 2136, 2522, 2688
Eco130I CCWWGG 2 cut(s) 19, 336
Eco147I AGGCCT 2 cut(s) 24, 1461
Eco24I GRGCYC 1 cut(s) 1431
Eco31I GGTCTC 1 cut(s) 2524
Eco32I GATATC 2 cut(s) 630, 2221
Eco57I CTGAAG 1 cut(s) 1701
EcoRI GAATTC 2 cut(s) 1932, 2117
EcoRII CCWGG 2 cut(s) 24, 2046
EcoRV GATATC 2 cut(s) 630, 2221
EcoT14I CCWWGG 2 cut(s) 19, 336
EcoT38I GRGCYC 1 cut(s) 1431
ErhI CCWWGG 2 cut(s) 19, 336
FalI AAGNNNNNCTT 2 cut(s) 1975, 2007
FauI CCCGC 1 cut(s) 1109
FauNDI CATATG 1 cut(s) 2476
FblI GTMKAC 1 cut(s) 1473
Fnu4HI GCNGC 3 cut(s) 369, 1132, 1135
FokI GGATG 7 cut(s) 455, 908, 980, 1124, 2139, 2294, 2495
FriOI GRGCYC 1 cut(s) 1431
Fsp4HI GCNGC 3 cut(s) 369, 1132, 1135
FspBI CTAG 9 cut(s) 198, 261, 402, 410, 1115, 1151, 1319, 2108, 2523
GluI GCNGC 3 cut(s) 369, 1132, 1135
GsuI CTGGAG 2 cut(s) 339, 2427
HaeIII GGCC 5 cut(s) 24, 177, 414, 1233, 1461
HapII CCGG 2 cut(s) 1497, 1740
HincII GTYRAC 5 cut(s) 190, 429, 807, 1098, 2472
HindII GTYRAC 5 cut(s) 190, 429, 807, 1098, 2472
HindIII AAGCTT 1 cut(s) 281
HinfI GANTC 8 cut(s) 643, 1147, 1283, 1315, 1540, 2563, 2618, 2741
HpaI GTTAAC 3 cut(s) 429, 807, 1098
HpaII CCGG 2 cut(s) 1497, 1740
HphI GGTGA 9 cut(s) 205, 260, 802, 1334, 1388, 1549, 1913, 1955, 2632
Hpy188I TCNGA 8 cut(s) 53, 749, 839, 1339, 1386, 1681, 2344, 2782
HpyCH4III ACNGT 5 cut(s) 361, 804, 813, 1752, 2794
HpyCH4IV ACGT 1 cut(s) 2385
HpyF10VI GCNNNNNNNGC 4 cut(s) 30, 697, 1021, 2735
HpyF3I CTNAG 6 cut(s) 279, 1127, 1226, 2024, 2137, 2810
HpySE526I ACGT 1 cut(s) 2385
Kpn2I TCCGGA 1 cut(s) 1496
KpnI GGTACC 1 cut(s) 468
KspAI GTTAAC 3 cut(s) 429, 807, 1098
Kzo9I GATC 5 cut(s) 1180, 1299, 2290, 2423, 2539
LmnI GCTCC 8 cut(s) 38, 393, 537, 1863, 1988, 2133, 2411, 2446
Lsp1109I GCAGC 2 cut(s) 355, 1146
LweI GCATC 7 cut(s) 930, 1002, 1146, 2047, 2161, 2173, 2646
MabI ACCWGGT 1 cut(s) 2046
MaeI CTAG 9 cut(s) 198, 261, 402, 410, 1115, 1151, 1319, 2108, 2523
MaeII ACGT 1 cut(s) 2385
MaeIII GTNAC 4 cut(s) 668, 2059, 2303, 2552
MalI GATC 5 cut(s) 1182, 1301, 2292, 2425, 2541
MboI GATC 5 cut(s) 1180, 1299, 2290, 2423, 2539
MfeI CAATTG 4 cut(s) 128, 416, 1403, 1581
MflI RGATCY 1 cut(s) 1180
MhlI GDGCHC 4 cut(s) 560, 693, 1431, 1820
MlyI GAGTC 2 cut(s) 652, 1156
MmeI TCCRAC 4 cut(s) 643, 1152, 1603, 2367
MroI TCCGGA 1 cut(s) 1496
MroXI GAANNNNTTC 1 cut(s) 1035
MslI CAYNNNNRTG 1 cut(s) 1724
MspI CCGG 2 cut(s) 1497, 1740
MspR9I CCNGG 3 cut(s) 26, 1741, 2048
MunI CAATTG 4 cut(s) 128, 416, 1403, 1581
Mva1269I GAATGC 5 cut(s) 540, 799, 1065, 1606, 2499
MvaI CCWGG 2 cut(s) 26, 2048
MwoI GCNNNNNNNGC 4 cut(s) 30, 697, 1021, 2735
NciI CCSGG 1 cut(s) 1741
NdeI CATATG 1 cut(s) 2476
NdeII GATC 5 cut(s) 1180, 1299, 2290, 2423, 2539
NheI GCTAGC 1 cut(s) 1114
NlaIV GGNNCC 3 cut(s) 34, 344, 466
NmuCI GTSAC 1 cut(s) 2552
NspI RCATGY 4 cut(s) 1348, 2070, 2339, 2603
PceI AGGCCT 2 cut(s) 24, 1461
PciI ACATGT 3 cut(s) 1344, 2335, 2599
PcsI WCGNNNNNNNCGW 1 cut(s) 969
PctI GAATGC 5 cut(s) 540, 799, 1065, 1606, 2499
PdmI GAANNNNTTC 1 cut(s) 1035
PfeI GAWTC 6 cut(s) 1283, 1315, 1540, 2563, 2618, 2741
PflMI CCANNNNNTGG 3 cut(s) 25, 122, 2450
PkrI GCNGC 3 cut(s) 370, 1133, 1136
PleI GAGTC 2 cut(s) 651, 1155
PpsI GAGTC 2 cut(s) 651, 1155
PscI ACATGT 3 cut(s) 1344, 2335, 2599
Psp1406I AACGTT 1 cut(s) 2385
Psp6I CCWGG 2 cut(s) 24, 2046
PspGI CCWGG 2 cut(s) 24, 2046
PspN4I GGNNCC 3 cut(s) 34, 344, 466
PspPI GGNCC 1 cut(s) 176
PsuI RGATCY 1 cut(s) 1180
RsaI GTAC 8 cut(s) 147, 363, 466, 1207, 1711, 1925, 1980, 2489
RsaNI GTAC 8 cut(s) 146, 362, 465, 1206, 1710, 1924, 1979, 2488
RseI CAYNNNNRTG 1 cut(s) 1724
SatI GCNGC 3 cut(s) 369, 1132, 1135
Sau3AI GATC 5 cut(s) 1180, 1299, 2290, 2423, 2539
Sau96I GGNCC 1 cut(s) 176
SchI GAGTC 2 cut(s) 652, 1156
ScrFI CCNGG 3 cut(s) 26, 1741, 2048
SduI GDGCHC 4 cut(s) 560, 693, 1431, 1820
SexAI ACCWGGT 1 cut(s) 2046
SfaNI GCATC 7 cut(s) 930, 1002, 1146, 2047, 2161, 2173, 2646
SmiMI CAYNNNNRTG 1 cut(s) 1724
SmlI CTYRAG 6 cut(s) 102, 553, 575, 769, 1040, 1453
SmoI CTYRAG 6 cut(s) 102, 553, 575, 769, 1040, 1453
SseBI AGGCCT 2 cut(s) 24, 1461
SsiI CCGC 6 cut(s) 753, 1102, 1131, 1508, 1632, 1641
SspMI CTAG 9 cut(s) 198, 261, 402, 410, 1115, 1151, 1319, 2108, 2523
StuI AGGCCT 2 cut(s) 24, 1461
StyD4I CCNGG 3 cut(s) 24, 1739, 2046
StyI CCWWGG 2 cut(s) 19, 336
TaaI ACNGT 5 cut(s) 361, 804, 813, 1752, 2794
TaiI ACGT 1 cut(s) 2388
TaqI TCGA 9 cut(s) 626, 882, 1145, 1465, 1483, 1660, 1938, 2041, 2755
TatI WGTACW 2 cut(s) 1923, 2487
TauI GCSGC 1 cut(s) 1134
TfiI GAWTC 6 cut(s) 1283, 1315, 1540, 2563, 2618, 2741
TscAI CASTG 8 cut(s) 235, 565, 664, 816, 1755, 2028, 2167, 2557
TseFI GTSAC 1 cut(s) 2552
TseI GCWGC 2 cut(s) 368, 1134
Tsp45I GTSAC 1 cut(s) 2552
TspGWI ACGGA 1 cut(s) 1886
TspRI CASTG 8 cut(s) 235, 565, 664, 816, 1755, 2028, 2167, 2557
Van91I CCANNNNNTGG 3 cut(s) 25, 122, 2450
XceI RCATGY 4 cut(s) 1348, 2070, 2339, 2603
XcmI CCANNNNNNNNNTGG 1 cut(s) 26
XmiI GTMKAC 1 cut(s) 1473
XmnI GAANNNNTTC 1 cut(s) 1035
XspI CTAG 9 cut(s) 198, 261, 402, 410, 1115, 1151, 1319, 2108, 2523
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.