RLG00000029276
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
35837306 .. 35840026
2721 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029276

Sequence Viewer

Length: 2598 bp
ATGGCCTCTTCAAATCTGAGAGCAAATAAGGTGGAAAGACTATCCTTGCTTGCCTTTAAAGCTGTAGTCAGTGATCCTCTGGGCATCCTTAGCTCCTGGAATTATTCCTCCAACTTATGTCATGAGTGGCGAGGGATCACTTGCGGCAGAAGACGCCCGAGAGTCAAGGTTCTCGACCTCCGGTCCAGCCAGCTGAAGGGTGTTCTATCTCCACATATCGGAAACTTGAGCTTTCTCAGGACATTAAATCTCCGAAGGAATAGCTTCACCGGCACCATCCCTCAAGAAGTTGGTCGACTGTCCCGACTGCAAGTACTAAACCTCGGGGACAACTTGTTCAAAGGTTATATCCCCATGAATATATCACATTGTTCTAACCTCCATTATCTTTTTTTGGCTAATAACAGTCTTACTGGCGAAATTCCAATTGAACTTGGCTCATTGTTGAAGCTTCAAGAACTTATTTTGCGCAGGAACAATTTAGTAGGGGAAATTCCCCCTTCCTTTGGAAATCTTTCTTCTCTTAAAGTTCTTTCTATGAAAGAAAATAATCTGCGTGGCCTCATGAATAGCCGCCTTGGGAAATTGAAAAGCTTAAGAGATCTTTCATTGGGTACAAATAGATTGTCTGGTACCATTCTTCCCTCCATATACAACCTTTCTTCAATTCAACACATTTCTGTGGTTGGAAACCAACTTCTTGGAACTCTTCCTTCTGGGTTGGGCTACACAATATTTCCAAAGCTTCAAATCTTTCAGTTCCAAATGAACACATTCAGTGGACCAATTCCATCTACTATCTCAAACGCATCCTACCTTTCACGATTTGGGATCTCTAATAATACTTTTACCGGAAAAGTCCCCAGTTTGGCAAGACTGTCCAATCTGGTTCGGCTGGAAATTGATGATAATAATCTTGGAAATGAGGATGGTGAATTGGATTTTCTCTCTTCTCTGGTCAATTGTACCGGTTTAGAACTTTTGGATATTAATGGGAATAATTTTCAAGGAGTTCTACCTGAATCTATCAGCAATCTCTCAACAAAGCTCAAGGTAATGAGCTTAGGAAGGAATCAGCTAAGAGGAAGCATTCCGATTGGGATAGGAAATCTCATCAACTTGTTTGTATTGAGCTTCGAGGAAAACCTATTGACGGGCCCTATACCGAGTTCAATATGTAAGCCAAGTAAACTAAGCAGTCTGTTTATAAACCATAATCAGTTATCAGGTACGATCCCTTTTTGTTTAGGAAATCTAACTTGGTTAAGCAGATTAGACCTCTCATTTAATGATTTTGAAGGCGAAGTACCCATTGACGGAGTTTTCAGGAATTCAACTGCAGTTTGTCTCGTGGGAAACAGAGGACTTTGTGGAGGTGTAACTCAGTTGAACTTGCCTCTATGTTGTTCTGAGTCTTCTGACGGGAGCCTGTTTCCTCTTTGGACATTAGTCTTCTCAGTTTTCTCTTTGGCGGTTGGAAGTATTTTGGTGTTGTGCTATCACTGCTGTGTGCCCCTTTATAGATCAAATAAAAGGAAAGCCAAAGCTAAGGTAACCGTGATACCATTATTGGATCTTTCACTCTTAAAATTGTCATATGGTGATCTCCTAAAAGCAACTGATGGCTTCTCTTCTCGGAATTTGATTGGCTCTGGTAGTTCTGGTTCTGTGTATTGGGGAGTTCTTGATCAACAGGAGGAAACAATTGTTGCTGTGAAAGTACTCAACCTTCAAAGTTCAAGAGCTTCTAGAAGTTTTGTAGCTGAATGTAAAGTCCTGAAAAGCATTAGGCACCGAAATCTTGTTAAACTAGTGACTGCTTGCTCAAGTATTGATTTTCAAGGAAATGAATTCAAAGCTTTGGTTTTTGAGTTCATGTTGGATGGAAATCTAGATGAAATGTTGCATTATTCAGCTCATACAGTGGTTGGGGTGCCCACTGTGCAGGTGCATTTGAATCTTATCCAAAGGGTAAATATTGCCATTGATGTAGCTAATGCTTTGGATTATTTGCACAGTCACTTTCACAACCCTATAGTTCATTGTGATTTAAAGCCGAGTAATGTTCTCCTAGAAAAGGACATGACTGCCCGTGTCTGTGATTTTGGGTTACCAACCTACCTCCCACATACTTCTTCACTAGAGAGTTCTTCCAATATAATAAGGGGGTCCATCGGCTATTTTCCCCCAGAGTATGGCATGGGAGGTGCGGTCTCAACGTATGGGGATGTGTATAGCTACGGAATCTTGTTACTGGAGATGCTTACTGGTAAGAGGCCAACAGATGATATGTTTACAGATGACACGAACTTGCACAATTTTGTTCTGATGGCTTTGCCTGAACGTGTGAAAGAAATATGTGATCCGTTGCTTCTTCAAGAAAAGGAAAGCAGCACTAGTACAAAGCCTGCAAGCAATAGGAATGATGTCCAAAATGATGAAACACGAAGAGTTGAAGAGTGTCTTATTTCCCTTGCTAGGATAGGAGTTGCTTGTTCTGTGCATTTGCCCAAAGCACGAATGGAGATTGGAAAAGTTGTAGCTGAATTACGTGTAATCAGGGATGTACTGACTGGAACCAGGATGCTTAGAGAGTAG

Protein Analysis

866

Amino Acids

95.18

Weight (kDa)

8.75

Isoelectric Point (pI)

38.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 12 - 48 1.3e-09 Leucine rich repeat N-terminal domain
LRR_8 PF13855 53 - 112 9.8e-06 Leucine rich repeat
LRR_14 PF23598 55 - 111 4.9e-06 Leucine-rich repeat region
LRR_8 PF13855 79 - 137 4.2e-06 Leucine rich repeat
LRR_14 PF23598 120 - 310 9.3e-12 Leucine-rich repeat region
LRR_8 PF13855 150 - 209 1.2e-06 Leucine rich repeat
Pkinase PF00069 545 - 772 2.9e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 547 - 768 1.5e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1208
AarI CACCTGC 1 cut(s) 1936
Acc16I TGCGCA 1 cut(s) 470
Acc36I ACCTGC 1 cut(s) 1936
Acc65I GGTACC 1 cut(s) 632
AccB1I GGYRCC 4 cut(s) 272, 632, 1791, 1933
AccB7I CCANNNNNTGG 1 cut(s) 2195
AccI GTMKAC 1 cut(s) 295
AciI CCGC 4 cut(s) 144, 574, 1472, 2210
AclWI GGATC 6 cut(s) 68, 143, 839, 1228, 1581, 2357
AcsI RAATTY 5 cut(s) 420, 492, 1330, 1639, 1850
AcuI CTGAAG 1 cut(s) 215
AcyI GRCGYC 1 cut(s) 154
AfaI GTAC 9 cut(s) 315, 616, 634, 967, 1231, 1308, 1722, 2401, 2568
AfiI CCNNNNNNNGG 9 cut(s) 196, 218, 506, 868, 1153, 1316, 2077, 2195, 2478
AflII CTTAAG 1 cut(s) 595
AflIII ACRYGT 2 cut(s) 2344, 2551
AgeI ACCGGT 1 cut(s) 968
AhdI GACNNNNNGTC 1 cut(s) 181
AhlI ACTAGT 2 cut(s) 1810, 2396
AjnI CCWGG 2 cut(s) 95, 2579
AjuI GAANNNNNNNTTGG 2 cut(s) 1243, 1275
AleI CACNNNNGTG 1 cut(s) 1506
AloI GAACNNNNNNTCC 2 cut(s) 320, 352
Alw26I GTCTC 2 cut(s) 1352, 2218
AlwI GGATC 6 cut(s) 68, 143, 839, 1228, 1581, 2357
Ama87I CYCGRG 2 cut(s) 157, 323
AoxI GGCC 4 cut(s) 3, 559, 1156, 2276
ApaI GGGCCC 1 cut(s) 1160
ApeKI GCWGC 1 cut(s) 2391
ApoI RAATTY 5 cut(s) 420, 492, 1330, 1639, 1850
ArsI GACNNNNNNTTYG 2 cut(s) 611, 643
AseI ATTAAT 1 cut(s) 990
AsiGI ACCGGT 1 cut(s) 968
Asp700I GAANNNNTTC 3 cut(s) 263, 514, 773
Asp718I GGTACC 1 cut(s) 632
AspLEI GCGC 1 cut(s) 471
AspS9I GGNCC 5 cut(s) 183, 782, 1156, 1157, 2169
AsuHPI GGTGA 3 cut(s) 259, 944, 1613
AvaI CYCGRG 2 cut(s) 157, 323
AvaII GGWCC 3 cut(s) 183, 782, 2169
BaeGI GKGCMC 3 cut(s) 1160, 1515, 1938
BanI GGYRCC 4 cut(s) 272, 632, 1791, 1933
BanII GRGCYC 1 cut(s) 1160
BarI GAAGNNNNNNTAC 4 cut(s) 1290, 1322, 1713, 1745
BauI CACGAG 1 cut(s) 1349
BbsI GAAGAC 3 cut(s) 157, 1407, 1444
BbvI GCAGC 1 cut(s) 2403
BccI CCATC 7 cut(s) 284, 799, 923, 1616, 1877, 2180, 2323
BciT130I CCWGG 2 cut(s) 97, 2581
BclI TGATCA 1 cut(s) 1687
BcoDI GTCTC 2 cut(s) 1352, 2218
BcuI ACTAGT 2 cut(s) 1810, 2396
BfaI CTAG 7 cut(s) 1749, 1811, 1892, 2072, 2141, 2397, 2478
BfmI CTRYAG 3 cut(s) 63, 1338, 2034
BfrI CTTAAG 1 cut(s) 595
BfuAI ACCTGC 1 cut(s) 1936
BglII AGATCT 1 cut(s) 601
BisI GCNGC 3 cut(s) 145, 574, 2392
BlsI GCNGC 3 cut(s) 146, 575, 2393
BmcAI AGTACT 2 cut(s) 315, 1722
Bme1390I CCNGG 2 cut(s) 97, 2581
Bme18I GGWCC 3 cut(s) 183, 782, 2169
BmeRI GACNNNNNGTC 1 cut(s) 181
BmeT110I CYCGRG 2 cut(s) 157, 323
BmgT120I GGNCC 5 cut(s) 183, 782, 1156, 1157, 2169
BmiI GGNNCC 8 cut(s) 274, 634, 1158, 1427, 1793, 1935, 2170, 2578
BmrFI CCNGG 2 cut(s) 97, 2581
BmrI ACTGGG 1 cut(s) 858
BmsI GCATC 4 cut(s) 93, 818, 2250, 2574
BmuI ACTGGG 1 cut(s) 858
BoxI GACNNNNGTC 1 cut(s) 1448
BpiI GAAGAC 3 cut(s) 157, 1407, 1444
BpmI CTGGAG 1 cut(s) 2276
Bpu10I CCTNAGC 3 cut(s) 89, 1063, 1548
BpuEI CTTGAG 4 cut(s) 247, 267, 1034, 1810
BsaAI YACGTR 1 cut(s) 2552
BsaBI GATNNNNATC 2 cut(s) 912, 1887
BsaHI GRCGYC 1 cut(s) 154
BsaI GGTCTC 1 cut(s) 2218
BsaJI CCNNGG 2 cut(s) 322, 577
BsaWI WCCGGW 3 cut(s) 180, 851, 968
BsaXI ACNNNNNCTCC 2 cut(s) 2196, 2226
Bsc4I CCNNNNNNNGG 9 cut(s) 196, 218, 506, 868, 1153, 1316, 2077, 2195, 2478
Bse118I RCCGGY 2 cut(s) 269, 968
Bse1I ACTGG 5 cut(s) 418, 864, 2259, 2272, 2578
Bse8I GATNNNNATC 2 cut(s) 912, 1887
BseBI CCWGG 2 cut(s) 97, 2581
BseDI CCNNGG 2 cut(s) 322, 577
BseGI GGATG 8 cut(s) 84, 276, 809, 934, 1888, 2233, 2569, 2589
BseJI GATNNNNATC 2 cut(s) 912, 1887
BseLI CCNNNNNNNGG 9 cut(s) 196, 218, 506, 868, 1153, 1316, 2077, 2195, 2478
BseMII CTCAG 5 cut(s) 8, 250, 1397, 1401, 1470
BseNI ACTGG 5 cut(s) 418, 864, 2259, 2272, 2578
BseSI GKGCMC 3 cut(s) 1160, 1515, 1938
BseXI GCAGC 1 cut(s) 2403
BsgI GTGCAG 1 cut(s) 1964
BshFI GGCC 4 cut(s) 5, 561, 1158, 2278
BshNI GGYRCC 4 cut(s) 272, 632, 1791, 1933
BshTI ACCGGT 1 cut(s) 968
BsiHKCI CYCGRG 2 cut(s) 157, 323
BsiSI CCGG 4 cut(s) 181, 270, 852, 969
BslFI GGGAC 3 cut(s) 286, 341, 845
BslI CCNNNNNNNGG 9 cut(s) 196, 218, 506, 868, 1153, 1316, 2077, 2195, 2478
BsmAI GTCTC 2 cut(s) 1352, 2218
BsmFI GGGAC 3 cut(s) 286, 341, 845
BsmI GAATGC 1 cut(s) 1089
BsnI GGCC 4 cut(s) 5, 561, 1158, 2278
Bso31I GGTCTC 1 cut(s) 2218
BsoBI CYCGRG 2 cut(s) 157, 323
Bsp120I GGGCCC 1 cut(s) 1156
Bsp1286I GDGCHC 3 cut(s) 1160, 1515, 1938
BspACI CCGC 4 cut(s) 144, 574, 1472, 2210
BspANI GGCC 4 cut(s) 5, 561, 1158, 2278
BspCNI CTCAG 5 cut(s) 9, 249, 1396, 1402, 1469
BspHI TCATGA 2 cut(s) 121, 564
BspLI GGNNCC 8 cut(s) 274, 634, 1158, 1427, 1793, 1935, 2170, 2578
BspMAI CTGCAG 1 cut(s) 1342
BspMI ACCTGC 1 cut(s) 1936
BspPI GGATC 6 cut(s) 68, 143, 839, 1228, 1581, 2357
BspT107I GGYRCC 4 cut(s) 272, 632, 1791, 1933
BspTI CTTAAG 1 cut(s) 595
BspTNI GGTCTC 1 cut(s) 2218
BsrFI RCCGGY 2 cut(s) 269, 968
BsrI ACTGG 5 cut(s) 418, 864, 2259, 2272, 2578
BssAI RCCGGY 2 cut(s) 269, 968
BssECI CCNNGG 2 cut(s) 322, 577
BssNI GRCGYC 1 cut(s) 154
BssSI CACGAG 1 cut(s) 1349
BssT1I CCWWGG 1 cut(s) 577
Bst2BI CACGAG 1 cut(s) 1349
Bst2UI CCWGG 2 cut(s) 97, 2581
Bst4CI ACNGT 7 cut(s) 300, 407, 879, 1558, 1924, 1942, 2018
Bst6I CTCTTC 6 cut(s) 13, 714, 955, 1636, 2443, 2451
BstACI GRCGYC 1 cut(s) 154
BstAFI CTTAAG 1 cut(s) 595
BstBAI YACGTR 1 cut(s) 2552
BstC8I GCNNGC 5 cut(s) 51, 191, 1822, 2409, 2413
BstEII GGTNACC 2 cut(s) 1552, 2109
BstENI CCTNNNNNAGG 1 cut(s) 2075
BstF5I GGATG 8 cut(s) 84, 276, 809, 934, 1888, 2233, 2569, 2589
BstHHI GCGC 1 cut(s) 471
BstMAI GTCTC 2 cut(s) 1352, 2218
BstMWI GCNNNNNNNGC 6 cut(s) 59, 90, 153, 270, 1503, 1942
BstNI CCWGG 2 cut(s) 97, 2581
BstPAI GACNNNNGTC 1 cut(s) 1448
BstPI GGTNACC 2 cut(s) 1552, 2109
BstSCI CCNGG 2 cut(s) 95, 2579
BstSFI CTRYAG 3 cut(s) 63, 1338, 2034
BstSLI GKGCMC 3 cut(s) 1160, 1515, 1938
BstV1I GCAGC 1 cut(s) 2403
BstV2I GAAGAC 3 cut(s) 157, 1407, 1444
BstX2I RGATCY 3 cut(s) 601, 831, 1573
BstXI CCANNNNNNTGG 1 cut(s) 701
BstYI RGATCY 3 cut(s) 601, 831, 1573
BsuRI GGCC 4 cut(s) 5, 561, 1158, 2278
BtsCI GGATG 8 cut(s) 84, 276, 809, 934, 1888, 2233, 2569, 2589
BtsI GCAGTG 1 cut(s) 1501
BtsIMutI CAGTG 5 cut(s) 76, 784, 1501, 1929, 1938
BveI ACCTGC 1 cut(s) 1936
Cac8I GCNNGC 5 cut(s) 51, 191, 1822, 2409, 2413
CciI TCATGA 2 cut(s) 121, 564
CfoI GCGC 1 cut(s) 471
Cfr10I RCCGGY 2 cut(s) 269, 968
Cfr13I GGNCC 5 cut(s) 183, 782, 1156, 1157, 2169
CseI GACGC 1 cut(s) 162
Csp6I GTAC 9 cut(s) 314, 615, 633, 966, 1230, 1307, 1721, 2400, 2567
CspAI ACCGGT 1 cut(s) 968
CspCI CAANNNNNGTGG 2 cut(s) 12, 47
CviAII CATG 6 cut(s) 122, 355, 565, 1876, 2083, 2200
CviQI GTAC 9 cut(s) 314, 615, 633, 966, 1230, 1307, 1721, 2400, 2567
DraI TTTAAA 2 cut(s) 58, 2052
DriI GACNNNNNGTC 1 cut(s) 181
Eam1104I CTCTTC 6 cut(s) 13, 714, 955, 1636, 2443, 2451
Eam1105I GACNNNNNGTC 1 cut(s) 181
EarI CTCTTC 6 cut(s) 13, 714, 955, 1636, 2443, 2451
Eco130I CCWWGG 1 cut(s) 577
Eco24I GRGCYC 1 cut(s) 1160
Eco31I GGTCTC 1 cut(s) 2218
Eco47I GGWCC 3 cut(s) 183, 782, 2169
Eco57I CTGAAG 1 cut(s) 215
Eco88I CYCGRG 2 cut(s) 157, 323
Eco91I GGTNACC 2 cut(s) 1552, 2109
EcoNI CCTNNNNNAGG 1 cut(s) 2075
EcoO109I RGGNCCY 1 cut(s) 1157
EcoO65I GGTNACC 2 cut(s) 1552, 2109
EcoRI GAATTC 2 cut(s) 1330, 1850
EcoRII CCWGG 2 cut(s) 95, 2579
EcoT14I CCWWGG 1 cut(s) 577
EcoT38I GRGCYC 1 cut(s) 1160
ErhI CCWWGG 1 cut(s) 577
FaeI CATG 6 cut(s) 125, 358, 568, 1879, 2086, 2203
FalI AAGNNNNNCTT 2 cut(s) 2448, 2480
FaqI GGGAC 3 cut(s) 286, 341, 845
FatI CATG 6 cut(s) 121, 354, 564, 1875, 2082, 2199
FauNDI CATATG 1 cut(s) 1597
FbaI TGATCA 1 cut(s) 1687
FblI GTMKAC 1 cut(s) 295
Fnu4HI GCNGC 3 cut(s) 145, 574, 2392
FokI GGATG 7 cut(s) 71, 263, 796, 941, 1895, 2240, 2576
FriOI GRGCYC 1 cut(s) 1160
Fsp4HI GCNGC 3 cut(s) 145, 574, 2392
FspBI CTAG 7 cut(s) 1749, 1811, 1892, 2072, 2141, 2397, 2478
FspI TGCGCA 1 cut(s) 470
GlaI GCGC 1 cut(s) 470
GluI GCNGC 3 cut(s) 145, 574, 2392
GsuI CTGGAG 1 cut(s) 2276
HaeIII GGCC 4 cut(s) 5, 561, 1158, 2278
HapII CCGG 4 cut(s) 181, 270, 852, 969
HgaI GACGC 1 cut(s) 162
HhaI GCGC 1 cut(s) 471
Hin1I GRCGYC 1 cut(s) 154
Hin1II CATG 6 cut(s) 125, 358, 568, 1879, 2086, 2203
Hin6I GCGC 1 cut(s) 469
HinP1I GCGC 1 cut(s) 469
HincII GTYRAC 1 cut(s) 296
HindII GTYRAC 1 cut(s) 296
HindIII AAGCTT 4 cut(s) 449, 592, 743, 1857
HinfI GANTC 6 cut(s) 162, 1022, 1072, 1412, 1957, 2244
HpaII CCGG 4 cut(s) 181, 270, 852, 969
HphI GGTGA 3 cut(s) 259, 944, 1613
Hpy166II GTNNAC 4 cut(s) 296, 782, 1190, 2295
Hpy188I TCNGA 8 cut(s) 18, 221, 254, 1095, 1411, 1420, 1638, 2328
Hpy8I GTNNAC 4 cut(s) 296, 782, 1190, 2295
HpyAV CCTTC 7 cut(s) 190, 249, 510, 723, 1062, 1292, 1739
HpyCH4III ACNGT 7 cut(s) 300, 407, 879, 1558, 1924, 1942, 2018
HpyCH4IV ACGT 3 cut(s) 2219, 2344, 2551
HpyCH4V TGCA 9 cut(s) 310, 1340, 1906, 1945, 1951, 2014, 2314, 2411, 2503
HpyF10VI GCNNNNNNNGC 6 cut(s) 59, 90, 153, 270, 1503, 1942
HpySE526I ACGT 3 cut(s) 2219, 2344, 2551
Hsp92I GRCGYC 1 cut(s) 154
Hsp92II CATG 6 cut(s) 125, 358, 568, 1879, 2086, 2203
HspAI GCGC 1 cut(s) 469
KpnI GGTACC 1 cut(s) 636
Ksp22I TGATCA 1 cut(s) 1687
LmnI GCTCC 2 cut(s) 98, 1425
Lsp1109I GCAGC 1 cut(s) 2403
LweI GCATC 4 cut(s) 93, 818, 2250, 2574
MaeI CTAG 7 cut(s) 1749, 1811, 1892, 2072, 2141, 2397, 2478
MaeII ACGT 3 cut(s) 2219, 2344, 2551
MaeIII GTNAC 6 cut(s) 1378, 1552, 1813, 2018, 2109, 2250
MfeI CAATTG 3 cut(s) 426, 961, 1704
MflI RGATCY 3 cut(s) 601, 831, 1573
MhlI GDGCHC 3 cut(s) 1160, 1515, 1938
MlyI GAGTC 2 cut(s) 171, 1421
MmeI TCCRAC 4 cut(s) 135, 667, 1456, 1860
MroXI GAANNNNTTC 3 cut(s) 263, 514, 773
MslI CAYNNNNRTG 2 cut(s) 680, 1506
MspA1I CMGCKG 1 cut(s) 193
MspCI CTTAAG 1 cut(s) 595
MspI CCGG 4 cut(s) 181, 270, 852, 969
MspR9I CCNGG 2 cut(s) 97, 2581
MunI CAATTG 3 cut(s) 426, 961, 1704
Mva1269I GAATGC 1 cut(s) 1089
MvaI CCWGG 2 cut(s) 97, 2581
MwoI GCNNNNNNNGC 6 cut(s) 59, 90, 153, 270, 1503, 1942
NdeI CATATG 1 cut(s) 1597
NlaIII CATG 6 cut(s) 125, 358, 568, 1879, 2086, 2203
NlaIV GGNNCC 8 cut(s) 274, 634, 1158, 1427, 1793, 1935, 2170, 2578
NmeAIII GCCGAG 1 cut(s) 2082
NmuCI GTSAC 2 cut(s) 1813, 2018
NsbI TGCGCA 1 cut(s) 470
OliI CACNNNNGTG 1 cut(s) 1506
PagI TCATGA 2 cut(s) 121, 564
PaqCI CACCTGC 1 cut(s) 1936
PcsI WCGNNNNNNNCGW 1 cut(s) 301
PctI GAATGC 1 cut(s) 1089
PdmI GAANNNNTTC 3 cut(s) 263, 514, 773
PfeI GAWTC 4 cut(s) 1022, 1072, 1957, 2244
PflMI CCANNNNNTGG 1 cut(s) 2195
PfoI TCCNGGA 1 cut(s) 95
PinAI ACCGGT 1 cut(s) 968
PkrI GCNGC 3 cut(s) 146, 575, 2393
PleI GAGTC 2 cut(s) 170, 1420
PpsI GAGTC 2 cut(s) 170, 1420
Ppu21I YACGTR 1 cut(s) 2552
PshAI GACNNNNGTC 1 cut(s) 1448
PshBI ATTAAT 1 cut(s) 990
PsiI TTATAA 1 cut(s) 1208
Psp6I CCWGG 2 cut(s) 95, 2579
PspEI GGTNACC 2 cut(s) 1552, 2109
PspGI CCWGG 2 cut(s) 95, 2579
PspN4I GGNNCC 8 cut(s) 274, 634, 1158, 1427, 1793, 1935, 2170, 2578
PspOMI GGGCCC 1 cut(s) 1156
PspPI GGNCC 5 cut(s) 183, 782, 1156, 1157, 2169
PsrI GAACNNNNNNTAC 2 cut(s) 1648, 1680
PstI CTGCAG 1 cut(s) 1342
PsuI RGATCY 3 cut(s) 601, 831, 1573
PvuII CAGCTG 1 cut(s) 193
RsaI GTAC 9 cut(s) 315, 616, 634, 967, 1231, 1308, 1722, 2401, 2568
RsaNI GTAC 9 cut(s) 314, 615, 633, 966, 1230, 1307, 1721, 2400, 2567
RseI CAYNNNNRTG 2 cut(s) 680, 1506
SalI GTCGAC 1 cut(s) 294
SatI GCNGC 3 cut(s) 145, 574, 2392
Sau96I GGNCC 5 cut(s) 183, 782, 1156, 1157, 2169
ScaI AGTACT 2 cut(s) 315, 1722
SchI GAGTC 2 cut(s) 171, 1421
ScrFI CCNGG 2 cut(s) 97, 2581
SduI GDGCHC 3 cut(s) 1160, 1515, 1938
SfaNI GCATC 4 cut(s) 93, 818, 2250, 2574
SfcI CTRYAG 3 cut(s) 63, 1338, 2034
SinI GGWCC 3 cut(s) 183, 782, 2169
SmiMI CAYNNNNRTG 2 cut(s) 680, 1506
SmlI CTYRAG 5 cut(s) 226, 282, 595, 1049, 1825
SmoI CTYRAG 5 cut(s) 226, 282, 595, 1049, 1825
SpeI ACTAGT 2 cut(s) 1810, 2396
SsiI CCGC 4 cut(s) 144, 574, 1472, 2210
SspI AATATT 2 cut(s) 735, 1978
SspMI CTAG 7 cut(s) 1749, 1811, 1892, 2072, 2141, 2397, 2478
StyD4I CCNGG 2 cut(s) 95, 2579
StyI CCWWGG 1 cut(s) 577
TaaI ACNGT 7 cut(s) 300, 407, 879, 1558, 1924, 1942, 2018
TaiI ACGT 3 cut(s) 2222, 2347, 2554
TaqI TCGA 3 cut(s) 174, 295, 1137
TatI WGTACW 4 cut(s) 313, 1720, 2399, 2566
TauI GCSGC 2 cut(s) 147, 576
TfiI GAWTC 4 cut(s) 1022, 1072, 1957, 2244
TscAI CASTG 5 cut(s) 76, 784, 1508, 1929, 1945
TseFI GTSAC 2 cut(s) 1813, 2018
TseI GCWGC 1 cut(s) 2391
Tsp45I GTSAC 2 cut(s) 1813, 2018
TspGWI ACGGA 3 cut(s) 1332, 2256, 2355
TspRI CASTG 5 cut(s) 76, 784, 1508, 1929, 1945
Van91I CCANNNNNTGG 1 cut(s) 2195
Vha464I CTTAAG 1 cut(s) 595
VpaK11BI GGWCC 3 cut(s) 183, 782, 2169
VspI ATTAAT 1 cut(s) 990
XagI CCTNNNNNAGG 1 cut(s) 2075
XapI RAATTY 5 cut(s) 420, 492, 1330, 1639, 1850
XbaI TCTAGA 2 cut(s) 1748, 1891
XcmI CCANNNNNNNNNTGG 1 cut(s) 2518
XmiI GTMKAC 1 cut(s) 295
XmnI GAANNNNTTC 3 cut(s) 263, 514, 773
XspI CTAG 7 cut(s) 1749, 1811, 1892, 2072, 2141, 2397, 2478
ZrmI AGTACT 2 cut(s) 315, 1722
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.