MD07G1089300.v1.1
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
9319529 .. 9322731
3203 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1089300.v1.1.491

Sequence Viewer

Length: 3060 bp
ATGGGGTTTTACAACTCCATTTCTGCAGTGTTTTTGTCATCCTTTTTTATGCATGCTTTCATTCTTCACTCTTCCTTTCCTTGTTTCGCCTTTCCGGGAAATGAGACAGATAGACTTGCTTTGCTTGAAATCAAGGCTAGCATAACTCATGACCCTTTTAAAGTCCTGACTTCATGGAATGAAACCATCCACTTTTGCTCTTGGCATGGCGTTACATGTGGTCGTCGTCATAAGAGGGTCACAAGCTTGAGCCTGCGGTCCTTGAAACTTGCAGGATCTATATCGCCGCATGTTGGGAACTTGAGTTTTTTGAGAGTCATTGATCTCCAAAACAATAGCTTAGGCCATGAAATTCCTCCAGAATTCAGCCGTCTGCACAGATTGCAACACCTACGGTTAAACAACAATTCACTGAGTGGAGAAATTCCCACTAACTTATCTCGTTGCTCTCAGCTTCTCAGGCTCGGTATTGGTTTCAATGTGCTGATGGGAAAGATTCCAAAGGAGCTTGGCCTCTTGTCAAAGTTAAAATATTTTTCCATCCACTCAAACCACTTTACAGGGGGAGTCCCTACTTCTTTTAGCAATTTATCATCTCTTGAAATGTTCTCCGCATCTACTAATAATTTAAGTGGCACTGTCCCCGATATTTTTGGCCGAATGACCAATCTTAGCTTTCTTGCTTTTGGTGGAAATAGCTTTTCGGGTATGCTTCCTCCCTCAATCTTTAATCTCTCTTCTCTCACACTCCTTTCTATGGAATCCAACGAAATCCAAGGGAGTCTGCCCGCAAACTTAGGTATGGTCTTTCCGAGTCTCCAAACATTTTCCATTACCCATAACCAATTCAGTGGATCTATTCCTGTTTCCTTATCTAATGCGTCAAATCTAATTGAATTTGAGATGGCAGGTAACCAATTGCATGGAAAGGTCCCTCCTTTGACGAATTTGCATAAGCTTGAGTGGTTAATCCTTGCTGACAATCATCTCGGAAGTGGGGGAATTGATGACTTGACCTTTCTCTGCGATTTGAGCAATGCCACCCATTTAGAATTTATCCAAATGTTTGCCAACAATTTTGGGGGAAGGTTACCTCAATGCATAGGAAACCTGTCTTCTTCTTTTCGATATTTCCATGTTGCTCAAAATAAAATATTAGGAAGTATCCCAAATGAGATTGCAAATCTGGCTAACTTAGAGCTTTTGTGGATGTCTGAGAACCAATTTTCAGGTCACATTCCCCCTGGTGTAGGAAAGCTTCACAAGTTATATCTATTAAATTTGGATAGGAACTCTCTCTCTGGCAATCCTCCACCCTCTTTTGGAAATTTAAGTCAATTAAATGAGTTACACCTAGAAGGCAACAAACTTCAAGGCAATATGCAGAGTTTAATTGAGTGTCAGAATTTGAGGATCTTATCCCTTGGTGCTAACAATTTTAGCGGGATCATATCACAAGAAATCGTTGGTCTGTTGAACTTGTATATATTGAGTTTACCTCAAAATCATTTTATAGGCTCCCTGCCAGAGAACATAGGAATTTTAATAAATCTTCAGTATTTAGATATTTCTGAAAACATGTTACTAGGTGAAATTCCAGCAAGTCTTGCTAGCTGTATAACATTAGAGTACCTATACATGCATGGAAATTTCTTCCATGGGACGATTCCATCAACTTTGAGTTCACTAAGAGGTCTTTCAGAATTGTTTCTTTCTCACAACAACTTGTCAGGCACCATTCCAGAATTCTTAGAAAGTTTTAAACTTTTGCAATCTTTGAATCTATCTTATAATAATTTTGAGGGCATGGTGCCGATCAAAGGAGTGTTCAAGAATGCAACGGCGACATCAGTTGAAGGAAATAGTAAGCTTTGTGGGGGCATACCTGAGTTTCATTTGCCAAAGTGCAAACTCCAGCATGCAAAAAAGGAAGGATTGAGCTTAACCATAAAATTGGTTCTCTCCCTCGTTTGTGGGATTCTTGGAGTCATTTTTGCACTAACCTATTTGTACCTTTATTGCTCACGGAGGGACAAAAAGGATCGCGCTGCAAGTGATTCGGACAAATTTCCCCAGGTGTCTTACCAAAGTCTTCTTAAAGCAACAAATGGATTCTCCTCAACCAACTTGGTCGGTATGGGCAGTTTTGGGTCCGTTTATAAAGGAGTACTTGAGCAAGGAGAAACTACAATTGCCATCAAGGTACTCAACCTAGTTCGTCACGGAGCTTACAAAAGTTTTATTGCTGAGTGCGAGGCTTTCAAAAATATTAGACACCGTAATCTTGTCAAGGTACTCTCGGCATGTTCTGGTTTTGATTATCACAGCCACGACTTCAAGGCCTTAATTTACGAGTTCATGGTTAATGGGAGCTTGGAGGAATGGCTGTATCCAATTCATACAATTGGTGAGACAAATGAAAGGCCAAGGAGCTTAACAATTTCTCAGAGGTTGAATATTGTTATTGATGTTGCTATGGCATTGGATTATCTCCATAATCATTGTGAGACACCAATAGTTCATTGTGACCTCAAACCCAGCAATATTCTTCTCAATGAGGACATGATTGCACATGTAGGTGACTTCGGGTTGGTGAGGTTCTTACCAAAAGTTGCTGAAAATTCTTTGGGAAATCAGTCAAGTTCCTTAGGGATCAAGGGAACTATTGGTTATGCTCCTCCAGAATATGGCATGGGGCATGAAGTGTGGACACAAGGTGATGTGTATAGCTTTGGCATCCTCCTGTTGGAAATATTTACAGGAAAAAGACCGACTAATGACATGTTTCAGGGAACTTCAAACCTTTATAGCTTTGTGAAGGCAGCTCTGCCTGAGCAAGTGGAAGAGGTTTTGGATCCCGTTCTTGTTCAAGAGAGCAATCATCCTAATGAGGGGAGGGCAAGGAATCACGTCCTAATCATAGAAAGTTTAATCTCTGTAATAGAAGTTGGTGTTGCTTGCTCAGCGGAGGTGCCTAGAGAAAGATTGAACATCTGTGATGCTGTGGTACATATGTGTCGGATCAGAAACAAACTTCGAGCAAATGGCATATGTGAATAG

Protein Analysis

1020

Amino Acids

112.46

Weight (kDa)

6.59

Isoelectric Point (pI)

38.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 35 - 73 5.4e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 368 - 452 3e-07 Leucine-rich repeat region
LRR_14 PF23598 460 - 597 9.7e-11 Leucine-rich repeat region
LRR_8 PF13855 541 - 600 3.3e-06 Leucine rich repeat
Pkinase PF00069 707 - 927 4.8e-34 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 709 - 931 9.9e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1791, 2160
Acc36I ACCTGC 1 cut(s) 899
AccB1I GGYRCC 3 cut(s) 1733, 1810, 2971
AccB7I CCANNNNNTGG 1 cut(s) 2687
AccII CGCG 1 cut(s) 2046
AciI CCGC 6 cut(s) 256, 287, 612, 789, 1443, 2966
AclWI GGATC 9 cut(s) 283, 862, 1421, 1454, 2049, 2660, 2849, 2862, 3029
AcoI YGGCCR 1 cut(s) 655
AcuI CTGAAG 1 cut(s) 1538
AdeI CACNNNGTG 2 cut(s) 416, 2717
AfaI GTAC 6 cut(s) 1631, 2012, 2169, 2205, 2295, 3009
AfiI CCNNNNNNNGG 8 cut(s) 293, 757, 1250, 1322, 1820, 2687, 2746, 2891
AflIII ACRYGT 4 cut(s) 215, 1578, 2572, 2781
AjiI CACGTC 1 cut(s) 2911
AjnI CCWGG 2 cut(s) 1243, 2073
Alw26I GTCTC 4 cut(s) 98, 821, 2405, 2501
AlwI GGATC 9 cut(s) 283, 862, 1421, 1454, 2049, 2660, 2849, 2862, 3029
AoxI GGCC 5 cut(s) 343, 511, 655, 2340, 2423
ApeKI GCWGC 2 cut(s) 2048, 2822
Asp700I GAANNNNTTC 1 cut(s) 1707
AspLEI GCGC 1 cut(s) 2048
AspS9I GGNCC 3 cut(s) 258, 931, 2151
AsuC2I CCSGG 1 cut(s) 96
AsuHPI GGTGA 5 cut(s) 1601, 2420, 2591, 2605, 2729
AsuNHI GCTAGC 2 cut(s) 137, 1610
AvaII GGWCC 3 cut(s) 258, 931, 2151
AxyI CCTNAGG 1 cut(s) 2647
BaeI ACNNNNGTAYC 2 cut(s) 2999, 3032
BamHI GGATCC 1 cut(s) 2854
BanI GGYRCC 3 cut(s) 1733, 1810, 2971
BarI GAAGNNNNNNTAC 2 cut(s) 1242, 1274
BbsI GAAGAC 2 cut(s) 1107, 2084
BbvI GCAGC 2 cut(s) 2035, 2834
BccI CCATC 6 cut(s) 194, 481, 548, 898, 1678, 2204
BceAI ACGGC 2 cut(s) 354, 1857
BcgI CGANNNNNNTGC 2 cut(s) 2040, 2074
BciT130I CCWGG 2 cut(s) 1245, 2075
BciVI GTATCC 2 cut(s) 1175, 2400
BcnI CCSGG 1 cut(s) 96
BcoDI GTCTC 4 cut(s) 98, 821, 2405, 2501
BfaI CTAG 6 cut(s) 138, 1355, 1586, 1611, 2213, 2976
BfmI CTRYAG 1 cut(s) 24
BfuAI ACCTGC 1 cut(s) 899
BfuI GTATCC 2 cut(s) 1175, 2400
BisI GCNGC 3 cut(s) 287, 2049, 2823
BlpI GCTNAGC 1 cut(s) 2962
BlsI GCNGC 3 cut(s) 288, 2050, 2824
BmcAI AGTACT 1 cut(s) 2169
Bme1390I CCNGG 3 cut(s) 96, 1245, 2075
Bme18I GGWCC 3 cut(s) 258, 931, 2151
BmgBI CACGTC 1 cut(s) 2911
BmgT120I GGNCC 3 cut(s) 258, 931, 2151
BmiI GGNNCC 7 cut(s) 933, 1519, 1735, 1812, 2152, 2856, 2973
BmrFI CCNGG 3 cut(s) 96, 1245, 2075
BmsI GCATC 3 cut(s) 623, 2745, 2989
BmtI GCTAGC 2 cut(s) 141, 1614
BpiI GAAGAC 2 cut(s) 1107, 2084
BplI GAGNNNNNCTC 2 cut(s) 1483, 1515
BpmI CTGGAG 3 cut(s) 342, 1898, 2664
Bpu10I CCTNAGC 2 cut(s) 340, 2832
Bpu1102I GCTNAGC 1 cut(s) 2962
BpuEI CTTGAG 4 cut(s) 268, 322, 980, 2192
BpuMI CCSGG 1 cut(s) 96
BsaBI GATNNNNATC 1 cut(s) 280
BsaJI CCNNGG 6 cut(s) 775, 1243, 1423, 1657, 2073, 2426
Bsc4I CCNNNNNNNGG 8 cut(s) 293, 757, 1250, 1322, 1820, 2687, 2746, 2891
Bse21I CCTNAGG 1 cut(s) 2647
Bse3DI GCAATG 1 cut(s) 1042
Bse8I GATNNNNATC 1 cut(s) 280
BseBI CCWGG 2 cut(s) 1245, 2075
BseDI CCNNGG 6 cut(s) 775, 1243, 1423, 1657, 2073, 2426
BseGI GGATG 6 cut(s) 38, 186, 540, 1215, 2736, 2881
BseJI GATNNNNATC 1 cut(s) 280
BseLI CCNNNNNNNGG 8 cut(s) 293, 757, 1250, 1322, 1820, 2687, 2746, 2891
BseMI GCAATG 1 cut(s) 1042
BseMII CTCAG 9 cut(s) 404, 464, 472, 1206, 1878, 2238, 2459, 2823, 2976
BseRI GAGGAG 2 cut(s) 2107, 2667
BseXI GCAGC 2 cut(s) 2035, 2834
BseYI CCCAGC 1 cut(s) 2537
BsgI GTGCAG 1 cut(s) 359
Bsh1236I CGCG 1 cut(s) 2046
BshFI GGCC 5 cut(s) 345, 513, 657, 2342, 2425
BshNI GGYRCC 3 cut(s) 1733, 1810, 2971
BsiSI CCGG 1 cut(s) 95
BslFI GGGAC 5 cut(s) 554, 626, 917, 1675, 2045
BslI CCNNNNNNNGG 8 cut(s) 293, 757, 1250, 1322, 1820, 2687, 2746, 2891
BsmAI GTCTC 4 cut(s) 98, 821, 2405, 2501
BsmFI GGGAC 5 cut(s) 554, 626, 917, 1675, 2045
BsmI GAATGC 1 cut(s) 1840
BsnI GGCC 5 cut(s) 345, 513, 657, 2342, 2425
Bsp1720I GCTNAGC 1 cut(s) 2962
Bsp19I CCATGG 1 cut(s) 1657
BspACI CCGC 6 cut(s) 256, 287, 612, 789, 1443, 2966
BspANI GGCC 5 cut(s) 345, 513, 657, 2342, 2425
BspCNI CTCAG 9 cut(s) 405, 463, 471, 1207, 1879, 2239, 2458, 2824, 2975
BspFNI CGCG 1 cut(s) 2046
BspHI TCATGA 1 cut(s) 148
BspLI GGNNCC 7 cut(s) 933, 1519, 1735, 1812, 2152, 2856, 2973
BspMAI CTGCAG 1 cut(s) 28
BspMI ACCTGC 1 cut(s) 899
BspOI GCTAGC 2 cut(s) 141, 1614
BspPI GGATC 9 cut(s) 283, 862, 1421, 1454, 2049, 2660, 2849, 2862, 3029
BspT107I GGYRCC 3 cut(s) 1733, 1810, 2971
BsrDI GCAATG 1 cut(s) 1042
BssECI CCNNGG 6 cut(s) 775, 1243, 1423, 1657, 2073, 2426
BssT1I CCWWGG 4 cut(s) 775, 1423, 1657, 2426
Bst2UI CCWGG 2 cut(s) 1245, 2075
Bst4CI ACNGT 3 cut(s) 396, 640, 2279
Bst6I CTCTTC 3 cut(s) 76, 742, 2838
BstAPI GCANNNNNTGC 2 cut(s) 382, 1607
BstC8I GCNNGC 7 cut(s) 54, 139, 254, 789, 1612, 1920, 2959
BstDSI CCRYGG 1 cut(s) 1657
BstEII GGTNACC 2 cut(s) 911, 1089
BstENI CCTNNNNNAGG 1 cut(s) 1248
BstF5I GGATG 6 cut(s) 38, 186, 540, 1215, 2736, 2881
BstFNI CGCG 1 cut(s) 2046
BstHHI GCGC 1 cut(s) 2048
BstMAI GTCTC 4 cut(s) 98, 821, 2405, 2501
BstMWI GCNNNNNNNGC 6 cut(s) 382, 460, 1032, 1187, 1607, 2963
BstNI CCWGG 2 cut(s) 1245, 2075
BstNSI RCATGY 9 cut(s) 56, 219, 293, 1582, 1642, 1922, 2307, 2576, 2785
BstPI GGTNACC 2 cut(s) 911, 1089
BstSCI CCNGG 3 cut(s) 94, 1243, 2073
BstSFI CTRYAG 1 cut(s) 24
BstUI CGCG 1 cut(s) 2046
BstV1I GCAGC 2 cut(s) 2035, 2834
BstV2I GAAGAC 2 cut(s) 1107, 2084
BstX2I RGATCY 4 cut(s) 275, 854, 1413, 2854
BstXI CCANNNNNNTGG 3 cut(s) 851, 923, 1954
BstYI RGATCY 4 cut(s) 275, 854, 1413, 2854
Bsu36I CCTNAGG 1 cut(s) 2647
BsuI GTATCC 2 cut(s) 1175, 2400
BsuRI GGCC 5 cut(s) 345, 513, 657, 2342, 2425
BtgI CCRYGG 1 cut(s) 1657
BtrI CACGTC 1 cut(s) 2911
BtsCI GGATG 6 cut(s) 38, 186, 540, 1215, 2736, 2881
BtsI GCAGTG 1 cut(s) 33
BtsIMutI CAGTG 4 cut(s) 33, 410, 636, 856
BveI ACCTGC 1 cut(s) 899
Cac8I GCNNGC 7 cut(s) 54, 139, 254, 789, 1612, 1920, 2959
CciI TCATGA 1 cut(s) 148
CfoI GCGC 1 cut(s) 2048
Cfr13I GGNCC 3 cut(s) 258, 931, 2151
CseI GACGC 1 cut(s) 870
Csp6I GTAC 6 cut(s) 1630, 2011, 2168, 2204, 2294, 3008
CviQI GTAC 6 cut(s) 1630, 2011, 2168, 2204, 2294, 3008
DraI TTTAAA 2 cut(s) 160, 1762
DraIII CACNNNGTG 2 cut(s) 416, 2717
EaeI YGGCCR 1 cut(s) 655
Eam1104I CTCTTC 3 cut(s) 76, 742, 2838
EarI CTCTTC 3 cut(s) 76, 742, 2838
Eco130I CCWWGG 4 cut(s) 775, 1423, 1657, 2426
Eco147I AGGCCT 1 cut(s) 2342
Eco47I GGWCC 3 cut(s) 258, 931, 2151
Eco57I CTGAAG 1 cut(s) 1538
Eco81I CCTNAGG 1 cut(s) 2647
Eco91I GGTNACC 2 cut(s) 911, 1089
EcoNI CCTNNNNNAGG 1 cut(s) 1248
EcoO109I RGGNCCY 1 cut(s) 931
EcoO65I GGTNACC 2 cut(s) 911, 1089
EcoRI GAATTC 2 cut(s) 362, 1745
EcoRII CCWGG 2 cut(s) 1243, 2073
EcoT14I CCWWGG 4 cut(s) 775, 1423, 1657, 2426
EcoT22I ATGCAT 3 cut(s) 54, 1103, 1644
ErhI CCWWGG 4 cut(s) 775, 1423, 1657, 2426
FalI AAGNNNNNCTT 2 cut(s) 2154, 2186
FaqI GGGAC 5 cut(s) 554, 626, 917, 1675, 2045
FauI CCCGC 2 cut(s) 796, 1436
FauNDI CATATG 2 cut(s) 3012, 3050
Fnu4HI GCNGC 3 cut(s) 287, 2049, 2823
FokI GGATG 6 cut(s) 25, 173, 527, 1222, 2723, 2868
Fsp4HI GCNGC 3 cut(s) 287, 2049, 2823
FspBI CTAG 6 cut(s) 138, 1355, 1586, 1611, 2213, 2976
GlaI GCGC 1 cut(s) 2047
GluI GCNGC 3 cut(s) 287, 2049, 2823
GsaI CCCAGC 1 cut(s) 2541
GsuI CTGGAG 3 cut(s) 342, 1898, 2664
HaeIII GGCC 5 cut(s) 345, 513, 657, 2342, 2425
HapII CCGG 1 cut(s) 95
HgaI GACGC 1 cut(s) 870
HhaI GCGC 1 cut(s) 2048
Hin6I GCGC 1 cut(s) 2046
HinP1I GCGC 1 cut(s) 2046
HindIII AAGCTT 4 cut(s) 244, 956, 1256, 1868
HpaII CCGG 1 cut(s) 95
HphI GGTGA 5 cut(s) 1601, 2420, 2591, 2605, 2729
Hpy166II GTNNAC 3 cut(s) 1496, 1685, 2709
Hpy188III TCNNGA 8 cut(s) 149, 166, 359, 599, 1742, 1831, 2681, 2870
Hpy8I GTNNAC 3 cut(s) 1496, 1685, 2709
Hpy99I CGWCG 1 cut(s) 228
HpyAV CCTTC 5 cut(s) 1080, 1352, 1850, 1925, 2812
HpyCH4III ACNGT 3 cut(s) 396, 640, 2279
HpyCH4IV ACGT 1 cut(s) 2910
HpyF10VI GCNNNNNNNGC 6 cut(s) 382, 460, 1032, 1187, 1607, 2963
HpySE526I ACGT 1 cut(s) 2910
HspAI GCGC 1 cut(s) 2046
LmnI GCTCC 6 cut(s) 505, 1523, 2225, 2370, 2430, 2680
Lsp1109I GCAGC 2 cut(s) 2035, 2834
LweI GCATC 3 cut(s) 623, 2745, 2989
MaeI CTAG 6 cut(s) 138, 1355, 1586, 1611, 2213, 2976
MaeII ACGT 1 cut(s) 2910
MfeI CAATTG 3 cut(s) 917, 2190, 2403
MflI RGATCY 4 cut(s) 275, 854, 1413, 2854
MlyI GAGTC 5 cut(s) 324, 576, 790, 823, 1995
MmeI TCCRAC 3 cut(s) 789, 2727, 2999
Mph1103I ATGCAT 3 cut(s) 54, 1103, 1644
MroXI GAANNNNTTC 1 cut(s) 1707
MslI CAYNNNNRTG 2 cut(s) 2577, 2886
MspA1I CMGCKG 1 cut(s) 2966
MspI CCGG 1 cut(s) 95
MspR9I CCNGG 3 cut(s) 96, 1245, 2075
MunI CAATTG 3 cut(s) 917, 2190, 2403
Mva1269I GAATGC 1 cut(s) 1840
MvaI CCWGG 2 cut(s) 1245, 2075
MvnI CGCG 1 cut(s) 2046
MwoI GCNNNNNNNGC 6 cut(s) 382, 460, 1032, 1187, 1607, 2963
NciI CCSGG 1 cut(s) 96
NcoI CCATGG 1 cut(s) 1657
NdeI CATATG 2 cut(s) 3012, 3050
NheI GCTAGC 2 cut(s) 137, 1610
NlaIV GGNNCC 7 cut(s) 933, 1519, 1735, 1812, 2152, 2856, 2973
NmeAIII GCCGAG 1 cut(s) 2279
NmuCI GTSAC 5 cut(s) 238, 1232, 2219, 2525, 2579
NsiI ATGCAT 3 cut(s) 54, 1103, 1644
NspI RCATGY 9 cut(s) 56, 219, 293, 1582, 1642, 1922, 2307, 2576, 2785
PaeI GCATGC 2 cut(s) 56, 1922
PagI TCATGA 1 cut(s) 148
PceI AGGCCT 1 cut(s) 2342
PciI ACATGT 4 cut(s) 215, 1578, 2572, 2781
PctI GAATGC 1 cut(s) 1840
PdmI GAANNNNTTC 1 cut(s) 1707
PfeI GAWTC 8 cut(s) 496, 761, 1666, 1780, 1978, 2057, 2112, 2905
PflMI CCANNNNNTGG 1 cut(s) 2687
PfoI TCCNGGA 1 cut(s) 94
PkrI GCNGC 3 cut(s) 288, 2050, 2824
PleI GAGTC 5 cut(s) 323, 575, 789, 822, 1994
PpsI GAGTC 5 cut(s) 323, 575, 789, 822, 1994
PpuMI RGGWCCY 1 cut(s) 931
PscI ACATGT 4 cut(s) 215, 1578, 2572, 2781
PsiI TTATAA 2 cut(s) 1791, 2160
Psp5II RGGWCCY 1 cut(s) 931
Psp6I CCWGG 2 cut(s) 1243, 2073
PspEI GGTNACC 2 cut(s) 911, 1089
PspFI CCCAGC 1 cut(s) 2537
PspGI CCWGG 2 cut(s) 1243, 2073
PspN4I GGNNCC 7 cut(s) 933, 1519, 1735, 1812, 2152, 2856, 2973
PspPI GGNCC 3 cut(s) 258, 931, 2151
PspPPI RGGWCCY 1 cut(s) 931
PstI CTGCAG 1 cut(s) 28
PsuI RGATCY 4 cut(s) 275, 854, 1413, 2854
RsaI GTAC 6 cut(s) 1631, 2012, 2169, 2205, 2295, 3009
RsaNI GTAC 6 cut(s) 1630, 2011, 2168, 2204, 2294, 3008
RseI CAYNNNNRTG 2 cut(s) 2577, 2886
SatI GCNGC 3 cut(s) 287, 2049, 2823
Sau96I GGNCC 3 cut(s) 258, 931, 2151
ScaI AGTACT 1 cut(s) 2169
SchI GAGTC 5 cut(s) 324, 576, 790, 823, 1995
ScrFI CCNGG 3 cut(s) 96, 1245, 2075
SfaNI GCATC 3 cut(s) 623, 2745, 2989
SfcI CTRYAG 1 cut(s) 24
SinI GGWCC 3 cut(s) 258, 931, 2151
SmiMI CAYNNNNRTG 2 cut(s) 2577, 2886
SmlI CTYRAG 4 cut(s) 247, 301, 959, 2171
SmoI CTYRAG 4 cut(s) 247, 301, 959, 2171
SphI GCATGC 2 cut(s) 56, 1922
SseBI AGGCCT 1 cut(s) 2342
SsiI CCGC 6 cut(s) 256, 287, 612, 789, 1443, 2966
SspI AATATT 6 cut(s) 533, 1155, 2269, 2458, 2545, 2754
SspMI CTAG 6 cut(s) 138, 1355, 1586, 1611, 2213, 2976
StuI AGGCCT 1 cut(s) 2342
StyD4I CCNGG 3 cut(s) 94, 1243, 2073
StyI CCWWGG 4 cut(s) 775, 1423, 1657, 2426
TaaI ACNGT 3 cut(s) 396, 640, 2279
TaiI ACGT 1 cut(s) 2913
TaqI TCGA 2 cut(s) 1126, 3037
TaqII GACCGA 1 cut(s) 2785
TatI WGTACW 1 cut(s) 2167
TauI GCSGC 1 cut(s) 289
TfiI GAWTC 8 cut(s) 496, 761, 1666, 1780, 1978, 2057, 2112, 2905
TscAI CASTG 4 cut(s) 33, 417, 643, 856
TseFI GTSAC 5 cut(s) 238, 1232, 2219, 2525, 2579
TseI GCWGC 2 cut(s) 2048, 2822
Tsp45I GTSAC 5 cut(s) 238, 1232, 2219, 2525, 2579
TspGWI ACGGA 3 cut(s) 2041, 2143, 2238
TspRI CASTG 4 cut(s) 33, 417, 643, 856
Van91I CCANNNNNTGG 1 cut(s) 2687
VpaK11BI GGWCC 3 cut(s) 258, 931, 2151
XagI CCTNNNNNAGG 1 cut(s) 1248
XceI RCATGY 9 cut(s) 56, 219, 293, 1582, 1642, 1922, 2307, 2576, 2785
XmnI GAANNNNTTC 1 cut(s) 1707
XspI CTAG 6 cut(s) 138, 1355, 1586, 1611, 2213, 2976
ZrmI AGTACT 1 cut(s) 2169
Zsp2I ATGCAT 3 cut(s) 54, 1103, 1644
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.