pycom01g12050

LRR receptor-like serine threonine-protein kinase At3g47570

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
12961716 .. 12963980
2265 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g12050.1

Sequence Viewer

Length: 2265 bp
ATGGGGAGTTTCAAGTTCATTTCACCACTTCTCTTCTTCTCATATTTGTGCATGCATGCCTTTGTTCTTAACTCATGTCTTCGTTTGGCCCTCGCCGGATCAAACGAGACAGATAAACTGGCGTTGCTCGAATTCAAGGCTAGGATAACTACAGACCCTTTTGGAGTCATGAGTTCGTGGAACGAAACAATTCACTTTTGCCAATGGCACGGTGTTACCTGTGGTCACCGCCACAAGAGGATCACAATGTTGACACTGAGTTCATTGAAGCTTGGAGGCTCTATATCGCCTCATGTTGGAAATTTGAGTTTCCTCAGAGTGTTTAATCTCATGAACAACAGCTTCAGTCATGAAATCCCTCCAGAAATTGGCAGTCTGCGCAGGCTGCAACTTTTGGGATTGCAGAATAATTCACTGAGTGGGAAAATTCCCGCTAATTTATCAGGTTGCTCTGAACTCAACTACATTAATATTGGCCGCAATTTGTTAGAAGGTAGTATCCCTAAGGAGCTTGGCACCTTGTCAAAGCTAAAAAAATTCAATATTAACGTGAACCACCTTACAGGAAGTATCCCTTACACTTTTAGCAACATATCATCTCTTGAAGCGTTTACAGCAGGTGGTAATAATTTAGGTGGCATTATTCCAGATATCTTTGGTCGACTGACAAATTTTAGTTTTCTTGTATTGGAAGGAAATGACTTGTCCGGTACGATCCCTCCCTCAGTTTTCAATCACTCTTCTCTTGACACCTTTGCTGTGGGATATAATTACAACCTCCAAGGCACGGTGCCTTCAAACTTAGGCAATTCTTGTCCAAGTCTCCGAACTTATGCCATCGATGATAACAAATTTAGTGGAACGATACCTGTTTCAATATCTAACGCATCAAATCTGTTTGAGCTAGCATTACACCAAAACCAACTGCGCGGAGAAGTCCCGTCTTTGAAAAACTTACACAATCTTGGGCGGTTTACTCTTGGTGATAACCATCTTGGAAGTGGGGGAACTGGTGATGATTTGAGCTTTCTTTGCGATCTGACTAATGCCACCGGTTTACAATACTTGGAATTTCAATCAAACAACTTTGGGGGTACGTTGCCTCGATGCTTAGCCAACCTGTCTTCTTCACTTTTATCTTTCTACGTAGACTATAATATTATATTTGGCAGTATCCCAAAGGGGATGGAAAATCTGCATAACCTGGAAACCATATGGCTGTCTGGCAACCAGTTTTCAGGTCTCATCCCCCCTGAAATAGGAAGGCTTTCCAAATTATATGAAGTATATATGGAAACCAACTCTCTCACTGGGAACGTTCCATCATCTTTTGGAAATTTAAGCCGATTAACTGATCTGCATCTCGAGGATAACAACCTTCAGGGCACCATCCCTTCAACTTTAGCCGAGTGCCCCTATTTGATGAACTTAACACTTGGTGGTAACAATTTCACTGGTATCATATCCCCAGAATTAATTCGTCCATCTTCTTCATATGTTTATTTGGATTTATCTCGAAATCATTTGACAGGCTTTCTTCCCAAGGAAGTCGGAAATTTGATAAATCTAGAGCATTTTGATGTGTCTGGAAACCTGTTGTCTGGTGAAATTCCTCCAAGTCTTGCAAGTTGTAAAACCATACAGTATCTTGACTTGCAAGAAAACTTCTTCCAAGGGACAATTCCATCAGATTTGAGTTCACTAAGAGGTATTGAAACCTTATCTCTCGCTCACAACAACTTGTCAGGGACAATTCCAAAATTCTTGGAGAATTTTACATTTCTGCAATCCTTGAATCTGTCTTATAACAATTTAGAGGGAGCAGTACCAATCGAAGGAGTTTTTCGGAATGCAACTGCCACATCAGTCCAAGGGAATACAAAGCTCTGCGGGGGCATACCAGAGTTTCAATTGCCAAAATGCAAATTTCGACATTCCAGCAAAAAGGGGTTGAACCTAACCTTGAAACTGGTAATCTCTCTCCTTTGTGGGCTTTCTGGAGCCTTTTTTTCATTTGCCGTTTTGTACCTTTGTTGCTTCCGGAGTAAAAAAAAGGCGGATCCATCGAGTGATTCTGAAAAATTTCCTAAGGTGTCTTACCAAAGTCTTCTTAAAGCTACTGATGGATTCTCTTCTGCCAATTTGATTGGAATGGGAAGTTTTGGGTCAGTTTATAAAGGATTGGTTCGATCAAGTTGGAACAACAATTGCTATCAAGGTACTCAACCTCGCTTGACACGGAGCTTCCAAAAGTTTCATTGCTGA

Protein Analysis

755

Amino Acids

82.45

Weight (kDa)

8.04

Isoelectric Point (pI)

38.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 36 - 74 1.6e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 94 - 187 2.9e-08 Leucine-rich repeat region
LRR_8 PF13855 425 - 484 3.8e-06 Leucine rich repeat
LRR_14 PF23598 473 - 604 3.9e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1806, 2175
AarI CACCTGC 1 cut(s) 608
Acc16I TGCGCA 1 cut(s) 380
Acc36I ACCTGC 1 cut(s) 608
AccB1I GGYRCC 3 cut(s) 515, 790, 1385
AccB7I CCANNNNNTGG 1 cut(s) 368
AccI GTMKAC 2 cut(s) 661, 1149
AccII CGCG 1 cut(s) 930
AccIII TCCGGA 1 cut(s) 2040
AciI CCGC 7 cut(s) 229, 432, 478, 930, 970, 1890, 2057
AclI AACGTT 1 cut(s) 1317
AclWI GGATC 5 cut(s) 106, 248, 709, 2054, 2067
AcoI YGGCCR 1 cut(s) 475
AcuI CTGAAG 2 cut(s) 328, 1364
AdeI CACNNNGTG 2 cut(s) 419, 1439
AfaI GTAC 5 cut(s) 712, 1096, 1827, 2027, 2221
AfiI CCNNNNNNNGG 5 cut(s) 296, 368, 787, 1259, 1835
AgeI ACCGGT 1 cut(s) 1052
AjnI CCWGG 1 cut(s) 1203
AjuI GAANNNNNNNTTGG 2 cut(s) 1665, 1697
AluBI AGCT 9 cut(s) 271, 342, 511, 529, 904, 1026, 1885, 2117, 2244
AluI AGCT 9 cut(s) 271, 342, 511, 529, 904, 1026, 1885, 2117, 2244
Alw26I GTCTC 3 cut(s) 101, 827, 1247
AlwI GGATC 5 cut(s) 106, 248, 709, 2054, 2067
Ama87I CYCGRG 1 cut(s) 1364
Aor13HI TCCGGA 1 cut(s) 2040
AoxI GGCC 2 cut(s) 87, 475
ApeKI GCWGC 1 cut(s) 385
AseI ATTAAT 2 cut(s) 468, 1475
AsiGI ACCGGT 1 cut(s) 1052
Asp700I GAANNNNTTC 4 cut(s) 189, 1267, 1476, 2082
AspLEI GCGC 2 cut(s) 381, 930
AspS9I GGNCC 1 cut(s) 88
AsuHPI GGTGA 5 cut(s) 15, 218, 995, 1025, 1616
AsuNHI GCTAGC 1 cut(s) 904
AvaI CYCGRG 1 cut(s) 1364
AxyI CCTNAGG 2 cut(s) 504, 2088
BaeGI GKGCMC 2 cut(s) 1388, 1415
BamHI GGATCC 1 cut(s) 2059
BanI GGYRCC 3 cut(s) 515, 790, 1385
BbsI GAAGAC 3 cut(s) 71, 1116, 2099
BbvI GCAGC 1 cut(s) 372
BccI CCATC 9 cut(s) 845, 999, 1180, 1330, 1397, 1492, 1693, 2071, 2117
BceAI ACGGC 1 cut(s) 2003
BciT130I CCWGG 1 cut(s) 1205
BciVI GTATCC 3 cut(s) 509, 581, 1184
BcoDI GTCTC 3 cut(s) 101, 827, 1247
BfaI CTAG 3 cut(s) 141, 905, 1568
BfmI CTRYAG 1 cut(s) 150
BfuAI ACCTGC 1 cut(s) 608
BfuI GTATCC 3 cut(s) 509, 581, 1184
BisI GCNGC 2 cut(s) 386, 478
BlpI GCTNAGC 1 cut(s) 1111
BlsI GCNGC 2 cut(s) 387, 479
Bme1390I CCNGG 1 cut(s) 1205
BmeT110I CYCGRG 1 cut(s) 1364
BmgT120I GGNCC 1 cut(s) 88
BmiI GGNNCC 5 cut(s) 517, 792, 1387, 2002, 2061
BmrFI CCNGG 1 cut(s) 1205
BmrI ACTGGG 1 cut(s) 1320
BmsI GCATC 3 cut(s) 896, 1097, 1369
BmtI GCTAGC 1 cut(s) 908
BmuI ACTGGG 1 cut(s) 1320
BpiI GAAGAC 3 cut(s) 71, 1116, 2099
BpmI CTGGAG 2 cut(s) 345, 2019
Bpu1102I GCTNAGC 1 cut(s) 1111
Bsa29I ATCGAT 1 cut(s) 840
BsaAI YACGTR 1 cut(s) 1147
BsaBI GATNNNNATC 2 cut(s) 990, 1359
BsaI GGTCTC 1 cut(s) 1247
BsaJI CCNNGG 4 cut(s) 781, 1542, 1672, 1870
BsaWI WCCGGW 3 cut(s) 707, 1052, 2040
BsaXI ACNNNNNCTCC 2 cut(s) 703, 733
Bsc4I CCNNNNNNNGG 5 cut(s) 296, 368, 787, 1259, 1835
Bse118I RCCGGY 1 cut(s) 1052
Bse1I ACTGG 6 cut(s) 123, 1015, 1231, 1315, 1459, 1974
Bse21I CCTNAGG 2 cut(s) 504, 2088
Bse3DI GCAATG 1 cut(s) 2257
Bse8I GATNNNNATC 2 cut(s) 990, 1359
BseAI TCCGGA 1 cut(s) 2040
BseBI CCWGG 1 cut(s) 1205
BseCI ATCGAT 1 cut(s) 840
BseDI CCNNGG 4 cut(s) 781, 1542, 1672, 1870
BseGI GGATG 3 cut(s) 1191, 1245, 1389
BseJI GATNNNNATC 2 cut(s) 990, 1359
BseLI CCNNNNNNNGG 5 cut(s) 296, 368, 787, 1259, 1835
BseMI GCAATG 1 cut(s) 2257
BseMII CTCAG 4 cut(s) 248, 328, 407, 738
BseNI ACTGG 6 cut(s) 123, 1015, 1231, 1315, 1459, 1974
BseSI GKGCMC 2 cut(s) 1388, 1415
BseXI GCAGC 1 cut(s) 372
Bsh1236I CGCG 1 cut(s) 930
BshFI GGCC 2 cut(s) 89, 477
BshNI GGYRCC 3 cut(s) 515, 790, 1385
BshTI ACCGGT 1 cut(s) 1052
BshVI ATCGAT 1 cut(s) 840
BsiHKCI CYCGRG 1 cut(s) 1364
BsiSI CCGG 4 cut(s) 96, 708, 1053, 2041
BslFI GGGAC 3 cut(s) 923, 1690, 1762
BslI CCNNNNNNNGG 5 cut(s) 296, 368, 787, 1259, 1835
BsmAI GTCTC 3 cut(s) 101, 827, 1247
BsmFI GGGAC 3 cut(s) 923, 1690, 1762
BsmI GAATGC 1 cut(s) 1855
BsnI GGCC 2 cut(s) 89, 477
Bso31I GGTCTC 1 cut(s) 1247
BsoBI CYCGRG 1 cut(s) 1364
Bsp1286I GDGCHC 2 cut(s) 1388, 1415
Bsp13I TCCGGA 1 cut(s) 2040
Bsp143I GATC 7 cut(s) 98, 240, 714, 1036, 1354, 2059, 2189
Bsp1720I GCTNAGC 1 cut(s) 1111
BspACI CCGC 7 cut(s) 229, 432, 478, 930, 970, 1890, 2057
BspANI GGCC 2 cut(s) 89, 477
BspCNI CTCAG 4 cut(s) 249, 327, 408, 737
BspDI ATCGAT 1 cut(s) 840
BspEI TCCGGA 1 cut(s) 2040
BspFNI CGCG 1 cut(s) 930
BspHI TCATGA 3 cut(s) 168, 330, 349
BspLI GGNNCC 5 cut(s) 517, 792, 1387, 2002, 2061
BspMI ACCTGC 1 cut(s) 608
BspOI GCTAGC 1 cut(s) 908
BspPI GGATC 5 cut(s) 106, 248, 709, 2054, 2067
BspT107I GGYRCC 3 cut(s) 515, 790, 1385
BspTNI GGTCTC 1 cut(s) 1247
BsrDI GCAATG 1 cut(s) 2257
BsrFI RCCGGY 1 cut(s) 1052
BsrI ACTGG 6 cut(s) 123, 1015, 1231, 1315, 1459, 1974
BssAI RCCGGY 1 cut(s) 1052
BssECI CCNNGG 4 cut(s) 781, 1542, 1672, 1870
BssMI GATC 7 cut(s) 98, 240, 714, 1036, 1354, 2059, 2189
BssT1I CCWWGG 4 cut(s) 781, 1542, 1672, 1870
Bst2UI CCWGG 1 cut(s) 1205
Bst4CI ACNGT 3 cut(s) 212, 790, 1644
Bst6I CTCTTC 3 cut(s) 38, 745, 2137
BstBAI YACGTR 1 cut(s) 1147
BstC8I GCNNGC 4 cut(s) 53, 57, 383, 906
BstDEI CTNAG 9 cut(s) 257, 314, 416, 504, 724, 802, 1111, 1703, 2088
BstEII GGTNACC 1 cut(s) 224
BstENI CCTNNNNNAGG 1 cut(s) 1257
BstF5I GGATG 3 cut(s) 1191, 1245, 1389
BstFNI CGCG 1 cut(s) 930
BstHHI GCGC 2 cut(s) 381, 930
BstKTI GATC 7 cut(s) 101, 243, 717, 1039, 1357, 2062, 2192
BstMAI GTCTC 3 cut(s) 101, 827, 1247
BstMBI GATC 7 cut(s) 98, 240, 714, 1036, 1354, 2059, 2189
BstMWI GCNNNNNNNGC 4 cut(s) 378, 385, 614, 1032
BstNI CCWGG 1 cut(s) 1205
BstNSI RCATGY 2 cut(s) 55, 59
BstPI GGTNACC 1 cut(s) 224
BstSCI CCNGG 1 cut(s) 1203
BstSFI CTRYAG 1 cut(s) 150
BstSLI GKGCMC 2 cut(s) 1388, 1415
BstSNI TACGTA 1 cut(s) 1147
BstUI CGCG 1 cut(s) 930
BstV1I GCAGC 1 cut(s) 372
BstV2I GAAGAC 3 cut(s) 71, 1116, 2099
BstX2I RGATCY 1 cut(s) 2059
BstYI RGATCY 1 cut(s) 2059
Bsu15I ATCGAT 1 cut(s) 840
Bsu36I CCTNAGG 2 cut(s) 504, 2088
BsuI GTATCC 3 cut(s) 509, 581, 1184
BsuRI GGCC 2 cut(s) 89, 477
BsuTUI ATCGAT 1 cut(s) 840
BtsCI GGATG 3 cut(s) 1191, 1245, 1389
BtsIMutI CAGTG 4 cut(s) 254, 413, 1308, 1452
BveI ACCTGC 1 cut(s) 608
Cac8I GCNNGC 4 cut(s) 53, 57, 383, 906
CciI TCATGA 3 cut(s) 168, 330, 349
CfoI GCGC 2 cut(s) 381, 930
Cfr10I RCCGGY 1 cut(s) 1052
Cfr13I GGNCC 1 cut(s) 88
ClaI ATCGAT 1 cut(s) 840
Csp6I GTAC 5 cut(s) 711, 1095, 1826, 2026, 2220
CspAI ACCGGT 1 cut(s) 1052
CspCI CAANNNNNGTGG 2 cut(s) 838, 873
CviAII CATG 7 cut(s) 52, 56, 75, 169, 293, 331, 350
CviQI GTAC 5 cut(s) 711, 1095, 1826, 2026, 2220
DdeI CTNAG 9 cut(s) 257, 314, 416, 504, 724, 802, 1111, 1703, 2088
DpnI GATC 7 cut(s) 100, 242, 716, 1038, 1356, 2061, 2191
DpnII GATC 7 cut(s) 98, 240, 714, 1036, 1354, 2059, 2189
DraIII CACNNNGTG 2 cut(s) 419, 1439
EaeI YGGCCR 1 cut(s) 475
Eam1104I CTCTTC 3 cut(s) 38, 745, 2137
EarI CTCTTC 3 cut(s) 38, 745, 2137
EciI GGCGGA 1 cut(s) 2072
Eco105I TACGTA 1 cut(s) 1147
Eco130I CCWWGG 4 cut(s) 781, 1542, 1672, 1870
Eco31I GGTCTC 1 cut(s) 1247
Eco32I GATATC 1 cut(s) 652
Eco57I CTGAAG 2 cut(s) 328, 1364
Eco81I CCTNAGG 2 cut(s) 504, 2088
Eco88I CYCGRG 1 cut(s) 1364
Eco91I GGTNACC 1 cut(s) 224
EcoNI CCTNNNNNAGG 1 cut(s) 1257
EcoO65I GGTNACC 1 cut(s) 224
EcoRI GAATTC 1 cut(s) 131
EcoRII CCWGG 1 cut(s) 1203
EcoRV GATATC 1 cut(s) 652
EcoT14I CCWWGG 4 cut(s) 781, 1542, 1672, 1870
EcoT22I ATGCAT 1 cut(s) 57
ErhI CCWWGG 4 cut(s) 781, 1542, 1672, 1870
FaeI CATG 7 cut(s) 55, 59, 78, 172, 296, 334, 353
FalI AAGNNNNNCTT 2 cut(s) 559, 591
FaqI GGGAC 3 cut(s) 923, 1690, 1762
FatI CATG 7 cut(s) 51, 55, 74, 168, 292, 330, 349
FauI CCCGC 2 cut(s) 439, 1883
FauNDI CATATG 2 cut(s) 1214, 1495
FblI GTMKAC 2 cut(s) 661, 1149
Fnu4HI GCNGC 2 cut(s) 386, 478
FokI GGATG 3 cut(s) 1198, 1232, 1376
Fsp4HI GCNGC 2 cut(s) 386, 478
FspBI CTAG 3 cut(s) 141, 905, 1568
FspI TGCGCA 1 cut(s) 380
GlaI GCGC 2 cut(s) 380, 929
GluI GCNGC 2 cut(s) 386, 478
GsuI CTGGAG 2 cut(s) 345, 2019
HaeIII GGCC 2 cut(s) 89, 477
HapII CCGG 4 cut(s) 96, 708, 1053, 2041
HhaI GCGC 2 cut(s) 381, 930
Hin1II CATG 7 cut(s) 55, 59, 78, 172, 296, 334, 353
Hin6I GCGC 2 cut(s) 379, 928
HinP1I GCGC 2 cut(s) 379, 928
HincII GTYRAC 2 cut(s) 252, 662
HindII GTYRAC 2 cut(s) 252, 662
HindIII AAGCTT 1 cut(s) 269
HinfI GANTC 4 cut(s) 165, 1795, 2072, 2127
HpaII CCGG 4 cut(s) 96, 708, 1053, 2041
HphI GGTGA 5 cut(s) 15, 218, 995, 1025, 1616
Hpy166II GTNNAC 8 cut(s) 252, 553, 612, 662, 975, 1058, 1150, 1700
Hpy188I TCNGA 8 cut(s) 317, 454, 827, 1041, 1553, 1690, 1848, 2077
Hpy8I GTNNAC 8 cut(s) 252, 553, 612, 662, 975, 1058, 1150, 1700
HpyAV CCTTC 7 cut(s) 485, 686, 804, 1257, 1388, 1404, 1829
HpyCH4III ACNGT 3 cut(s) 212, 790, 1644
HpyCH4IV ACGT 4 cut(s) 549, 1097, 1146, 1317
HpyF10VI GCNNNNNNNGC 4 cut(s) 378, 385, 614, 1032
HpyF3I CTNAG 9 cut(s) 257, 314, 416, 504, 724, 802, 1111, 1703, 2088
HpySE526I ACGT 4 cut(s) 549, 1097, 1146, 1317
Hsp92II CATG 7 cut(s) 55, 59, 78, 172, 296, 334, 353
HspAI GCGC 2 cut(s) 379, 928
Kpn2I TCCGGA 1 cut(s) 2040
Kzo9I GATC 7 cut(s) 98, 240, 714, 1036, 1354, 2059, 2189
LmnI GCTCC 4 cut(s) 508, 1820, 2000, 2241
Lsp1109I GCAGC 1 cut(s) 372
LweI GCATC 3 cut(s) 896, 1097, 1369
MaeI CTAG 3 cut(s) 141, 905, 1568
MaeII ACGT 4 cut(s) 549, 1097, 1146, 1317
MaeIII GTNAC 3 cut(s) 214, 224, 1442
MalI GATC 7 cut(s) 100, 242, 716, 1038, 1356, 2061, 2191
MboI GATC 7 cut(s) 98, 240, 714, 1036, 1354, 2059, 2189
MfeI CAATTG 2 cut(s) 1910, 2206
MflI RGATCY 1 cut(s) 2059
MhlI GDGCHC 2 cut(s) 1388, 1415
MlyI GAGTC 1 cut(s) 174
MmeI TCCRAC 3 cut(s) 277, 1531, 2177
Mph1103I ATGCAT 1 cut(s) 57
MroI TCCGGA 1 cut(s) 2040
MroXI GAANNNNTTC 4 cut(s) 189, 1267, 1476, 2082
MseI TTAA 9 cut(s) 69, 324, 468, 546, 1340, 1349, 1430, 1475, 2112
MslI CAYNNNNRTG 2 cut(s) 46, 1578
MspI CCGG 4 cut(s) 96, 708, 1053, 2041
MspR9I CCNGG 1 cut(s) 1205
MunI CAATTG 2 cut(s) 1910, 2206
Mva1269I GAATGC 1 cut(s) 1855
MvaI CCWGG 1 cut(s) 1205
MvnI CGCG 1 cut(s) 930
MwoI GCNNNNNNNGC 4 cut(s) 378, 385, 614, 1032
NdeI CATATG 2 cut(s) 1214, 1495
NdeII GATC 7 cut(s) 98, 240, 714, 1036, 1354, 2059, 2189
NheI GCTAGC 1 cut(s) 904
NlaIII CATG 7 cut(s) 55, 59, 78, 172, 296, 334, 353
NlaIV GGNNCC 5 cut(s) 517, 792, 1387, 2002, 2061
NmeAIII GCCGAG 1 cut(s) 1432
NmuCI GTSAC 1 cut(s) 224
NsbI TGCGCA 1 cut(s) 380
NsiI ATGCAT 1 cut(s) 57
NspI RCATGY 2 cut(s) 55, 59
PaeI GCATGC 2 cut(s) 55, 59
PaeR7I CTCGAG 1 cut(s) 1364
PagI TCATGA 3 cut(s) 168, 330, 349
PaqCI CACCTGC 1 cut(s) 608
PctI GAATGC 1 cut(s) 1855
PdmI GAANNNNTTC 4 cut(s) 189, 1267, 1476, 2082
PfeI GAWTC 3 cut(s) 1795, 2072, 2127
PflMI CCANNNNNTGG 1 cut(s) 368
PinAI ACCGGT 1 cut(s) 1052
PkrI GCNGC 2 cut(s) 387, 479
PleI GAGTC 1 cut(s) 173
PpsI GAGTC 1 cut(s) 173
Ppu21I YACGTR 1 cut(s) 1147
PshBI ATTAAT 2 cut(s) 468, 1475
PsiI TTATAA 2 cut(s) 1806, 2175
Psp1406I AACGTT 1 cut(s) 1317
Psp6I CCWGG 1 cut(s) 1203
PspEI GGTNACC 1 cut(s) 224
PspGI CCWGG 1 cut(s) 1203
PspN4I GGNNCC 5 cut(s) 517, 792, 1387, 2002, 2061
PspPI GGNCC 1 cut(s) 88
PsuI RGATCY 1 cut(s) 2059
RsaI GTAC 5 cut(s) 712, 1096, 1827, 2027, 2221
RsaNI GTAC 5 cut(s) 711, 1095, 1826, 2026, 2220
RseI CAYNNNNRTG 2 cut(s) 46, 1578
SalI GTCGAC 1 cut(s) 660
SaqAI TTAA 9 cut(s) 69, 324, 468, 546, 1340, 1349, 1430, 1475, 2112
SatI GCNGC 2 cut(s) 386, 478
Sau3AI GATC 7 cut(s) 98, 240, 714, 1036, 1354, 2059, 2189
Sau96I GGNCC 1 cut(s) 88
SchI GAGTC 1 cut(s) 174
ScrFI CCNGG 1 cut(s) 1205
SduI GDGCHC 2 cut(s) 1388, 1415
SfaNI GCATC 3 cut(s) 896, 1097, 1369
SfcI CTRYAG 1 cut(s) 150
Sfr274I CTCGAG 1 cut(s) 1364
SlaI CTCGAG 1 cut(s) 1364
SmiMI CAYNNNNRTG 2 cut(s) 46, 1578
SmlI CTYRAG 1 cut(s) 1364
SmoI CTYRAG 1 cut(s) 1364
SnaBI TACGTA 1 cut(s) 1147
SphI GCATGC 2 cut(s) 55, 59
SsiI CCGC 7 cut(s) 229, 432, 478, 930, 970, 1890, 2057
SspI AATATT 3 cut(s) 472, 544, 1159
SspMI CTAG 3 cut(s) 141, 905, 1568
StyD4I CCNGG 1 cut(s) 1203
StyI CCWWGG 4 cut(s) 781, 1542, 1672, 1870
TaaI ACNGT 3 cut(s) 212, 790, 1644
TaiI ACGT 4 cut(s) 552, 1100, 1149, 1320
TauI GCSGC 1 cut(s) 480
TfiI GAWTC 3 cut(s) 1795, 2072, 2127
Tru1I TTAA 9 cut(s) 69, 324, 468, 546, 1340, 1349, 1430, 1475, 2112
Tru9I TTAA 9 cut(s) 69, 324, 468, 546, 1340, 1349, 1430, 1475, 2112
TscAI CASTG 4 cut(s) 261, 420, 1315, 1459
TseFI GTSAC 1 cut(s) 224
TseI GCWGC 1 cut(s) 385
Tsp45I GTSAC 1 cut(s) 224
TspDTI ATGAA 9 cut(s) 7, 252, 347, 366, 1296, 1439, 1482, 2001, 2246
TspGWI ACGGA 1 cut(s) 2254
TspRI CASTG 4 cut(s) 261, 420, 1315, 1459
Van91I CCANNNNNTGG 1 cut(s) 368
VspI ATTAAT 2 cut(s) 468, 1475
XagI CCTNNNNNAGG 1 cut(s) 1257
XbaI TCTAGA 1 cut(s) 1567
XceI RCATGY 2 cut(s) 55, 59
XcmI CCANNNNNNNNNTGG 1 cut(s) 998
XhoI CTCGAG 1 cut(s) 1364
XmiI GTMKAC 2 cut(s) 661, 1149
XmnI GAANNNNTTC 4 cut(s) 189, 1267, 1476, 2082
XspI CTAG 3 cut(s) 141, 905, 1568
Zsp2I ATGCAT 1 cut(s) 57
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.