MD07G1088900.v1.1
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
9287612 .. 9292344
4733 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1088900.v1.1.491

Sequence Viewer

Length: 3078 bp
ATGGGGTTTTACAACTCCATTTCTGCAGTGTTTTTGTCATCCTTTTTTATGCATGCTTTCATTCTTCACTCTTCCTTTCCTTGTTTCGCCCTTCCGGGAAATGAGACAGATAGACTTGCTTTGCTTGAAATCAAGGCTAGCATAACTCATGACCCTTTTAAAGTCCTGACTTCATGGAATGAAACCATCCACTTTTGCTCTTGGCATGGCGTTACATGTGGTCGTCGTCATAAGAGGGTCACAAGCTTGAGCCTGCGGTCCTTGAAACTTGCAGGATCTATATCGCCGCATGTTGGGAACTTGAGTTTTTTGAGAGTCATTGATCTCCAAAACAATAGCTTAGGCCATGAAATTCCTCCAGAATTCAGCCGCCTGCACAGATTGCAACACCTACGGTTAAACAACAATTCACCGAGTGGAGAAATTCCCACTAACTTGTCGCGTTGCTCTCAGCTTCTCAGGCTCGGTATTGGTTTCAATGTGCTGATGGGAAAGATTCCAAAGGAGCTTGGCCTCTTGTCAAAGTTAAAATATTTTTCCATCCACTCAAACCACGTTACAGGGGGAGTCCCTACTTCTTTTGGCAATTTATCATCTCTTGAAATGTTCTCCGCATCTACTAATAATTTAAGTGGCACTGTCCCCAATATTTTTGGCCAAATGACCAATCTTAGCTTTCTTGCTTTTGGTGGAAATAGCTTTTCGGGTATGCTTCCTCCCTCAATCTTTAATCTCTCTTCTCTCACACTCCTTTCTATGGAATCCAACGAAATCCAAGGGAGTCTGCCCGCAAACTTAGGTATGGTCTTTCCGAGTCTCCAAACATTTTCCATTACCCATAACCAATTCAGTGGATCTATTCCTGTTTCCTTATCTAATGCGTCAAATCTAATTGAATTTGAGATGGCAGGTAACCAATTGCATGGAAAGGTCCCTCCTTTGACGAATTTGCATAAGCTTGAGTGGTTAATCCTTGCTGACAATCATCTCGGAAGTGGGGGAATTGATGACTTGACCTTTCTCTGCGATTTGAGCAATGCCACCCATTTAGAATTTATCCAAATGTTTGCCAACAATTTTGGGGGAAGGTTACCTCAATGCATAGGAAACCTGTCTTCTTCTTTTCGATATTTCCATGTTGCTCAAAATAAAATATTAGGAAGTATCCCAAATGAGATTGCAAATCTGGCTAACTTAGAGCTTTTGTGGATGTCTGAGAACCAATTTTCAGGTCACATTCCCCCTGGTGTAGGAAAGCTTCACAAGTTATGTCTATTAAATTTGGATAGGAACTCTCTCTCTAGCAATCTTCCATCCTCTTTCGGAAATTTAAGTCAATTAAATGAGTTACACCTAGAAGGCGACAAACTTCAAGGCAATATGGAGAGTTTAATTGAGTGTCAGAATTTGAGGATCTTATCCCTTGGTGCTAACAATTTTAGCGGGATCATATCACAAGAAATCGTTGGTCTGTTGAACTTGTATACATTGAGTTTACCTCAAAATCATTTTATAGGCTCCCTGCCAAAGAACATAGGAATTTTAATAAATCTTCAGTATTTAGATATTTCTGAAAACATGTTACTAGGTGAAATTCCAGCAAGTCTTGCGAGCTGTATAACATTAGAGTACCTATACATGCATGGAAATTTCTTCCATGGGACGATTCCATCAACTTTGAGTTCACTAAGAGGTCTTTCAGAATTGTTTCTTTCTCACAACAACTTGTCAGGCACCATTCCAGTATTCTTAGAGAGTTTTGAACTTTTGCAATCTCTGAATCTATCTTATAATAATTTTGAGGGCATGGTGCCGATCAAAGGAGTGTTCAAGAATGCAACGGCGACATCAGTTGAAGGAAATAGTAAGCTTTGTGAGGGCATACCTGAGTTTCATTTGCCAAAGTGCAAACTCCAGCATGCAAAAAATGAAGGATTGAGCTTAACCATGAAATTGGTTCTCTCCCTCGTTTGTGGGATTCTTGGAGTCATTTTTGCACTAACCTTTTTGTACCTTTATTGCTCACAGAGGTACAAAAAGCATCGCGCTTCAAGTGATTTGGACAAATTTCCCCAGGTGTCTTACAAAAGTCTTCTAAAAGCAACAAATGGATTCTCCTCAACCAACTTGGTCGATGAAACTACGGTTGCCATCAACGTACTCAACCTCGTTCGTCGTGGAGCTTACAAAAGTTTTATTGCTGAGTGCGAGGCTTTCAAAAGTATTAGACACCGTAATCTTGTCAAGGTACTCTCAGCATGTTCTGGTATTGATTATCGCGGCCACAACTTCAAAGCCTTAATTTACGAGTTCATGGTTAACGGGAGCCTAGAGGAATGGCTGTATCCAATTCATACAATTGGTGAGACACATGAGAGGCCAAGTAGCTTAACAATTTCTCAGAGGTTGAATATTGTTATTGATGTTGCTATGGCATTGGATTATCTCCATCATCATTGTGACTTCGGGTTGGTGAGGTTCCTACCAAAAGCTGCTGAAAATTCTTCGGGAAATCAATCAAGTTCTTTAGGGATCAAGGGAACCATTGGTTATGCTCCTCCAGAATATGGCATGGGACATGAAGTGTGGACACAAGGTGATGTGTACAGCTTTGGTATCCTCCTGTTGGAAATATTTACAGGAAAAAGACCGACGGATGAGATGTTTCAGGAAACTTCAAACCTTTATAGCTTTGTGAAGGCAGCTCTGCCTGAGCAAGTGGAAGAGGTTTTGGATCCCGTTCTTGTTCAAGAGAGCAATCATCCTAATGAGGGGAGGGCAAGGAATCACGTCCTAATCATAGAAAGTTTAATCTCTGTTTTAGAAATTGGTGTTGCTTGCTCAGCGGAGTTGCCTAGAGAAAGATTGAACATCTGTGATGCTGTGGCACATATGTGTCGGATCAGAAACCAACTTCGAGCAAATGGCAATGCGTACAGCTATGGCATTCTCTTATTGGAAATGTTTACAGCAAAAAGACCAACAGATAACATGTTTCAAGGATCTTCAAACCTGCATAACTTTGTTAAAGCATCTGGTAGATATTGTCGATCCCTCTCTTGTTCAAGAAACTGTTGA

Protein Analysis

1026

Amino Acids

113.28

Weight (kDa)

6.89

Isoelectric Point (pI)

39.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 35 - 73 5.5e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 168 - 255 1.7e-06 Leucine-rich repeat region
LRR_14 PF23598 368 - 452 1.3e-08 Leucine-rich repeat region
LRR_14 PF23598 460 - 593 7.1e-10 Leucine-rich repeat region
LRR_8 PF13855 541 - 600 7e-06 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 712 - 819 3.7e-09 Protein tyrosine and serine/threonine kinase
PK_Tyr_Ser-Thr PF07714 820 - 899 7.9e-08 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 820 - 892 9.2e-06 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1791
Acc36I ACCTGC 2 cut(s) 899, 3021
AccB1I GGYRCC 2 cut(s) 1733, 1810
AccB7I CCANNNNNTGG 1 cut(s) 2567
AccI GTMKAC 1 cut(s) 1484
AccII CGCG 3 cut(s) 442, 2046, 2280
AciI CCGC 8 cut(s) 256, 287, 370, 612, 789, 1443, 2280, 2846
AcoI YGGCCR 2 cut(s) 655, 2281
AcuI CTGAAG 1 cut(s) 1538
AdeI CACNNNGTG 2 cut(s) 416, 2597
AfaI GTAC 7 cut(s) 1631, 2012, 2033, 2160, 2250, 2606, 2936
AfiI CCNNNNNNNGG 7 cut(s) 293, 757, 1250, 1820, 2567, 2626, 2771
AflIII ACRYGT 3 cut(s) 215, 1578, 2991
AjiI CACGTC 1 cut(s) 2791
AjnI CCWGG 2 cut(s) 1243, 2073
AleI CACNNNNGTG 1 cut(s) 2893
Alw26I GTCTC 3 cut(s) 98, 821, 2360
AoxI GGCC 5 cut(s) 343, 511, 655, 2281, 2378
ApeKI GCWGC 2 cut(s) 2492, 2702
Asp700I GAANNNNTTC 1 cut(s) 1707
AspLEI GCGC 1 cut(s) 2048
AspS9I GGNCC 2 cut(s) 258, 931
AsuC2I CCSGG 1 cut(s) 96
AsuHPI GGTGA 5 cut(s) 402, 1601, 2375, 2485, 2609
AsuNHI GCTAGC 1 cut(s) 137
AvaII GGWCC 2 cut(s) 258, 931
BalI TGGCCA 1 cut(s) 657
BamHI GGATCC 1 cut(s) 2734
BanI GGYRCC 2 cut(s) 1733, 1810
BarI GAAGNNNNNNTAC 2 cut(s) 1242, 1274
BbsI GAAGAC 2 cut(s) 1107, 2084
BbvI GCAGC 2 cut(s) 2479, 2714
BccI CCATC 8 cut(s) 194, 481, 548, 898, 1321, 1678, 2159, 2457
BceAI ACGGC 1 cut(s) 1857
BciT130I CCWGG 2 cut(s) 1245, 2075
BciVI GTATCC 3 cut(s) 1175, 2355, 2627
BcnI CCSGG 1 cut(s) 96
BcoDI GTCTC 3 cut(s) 98, 821, 2360
BfaI CTAG 6 cut(s) 138, 1302, 1355, 1586, 2330, 2856
BfmI CTRYAG 1 cut(s) 24
BfuAI ACCTGC 2 cut(s) 899, 3021
BfuI GTATCC 3 cut(s) 1175, 2355, 2627
BisI GCNGC 5 cut(s) 287, 370, 2281, 2493, 2703
BlpI GCTNAGC 1 cut(s) 2842
BlsI GCNGC 5 cut(s) 288, 371, 2282, 2494, 2704
Bme1390I CCNGG 3 cut(s) 96, 1245, 2075
Bme18I GGWCC 2 cut(s) 258, 931
BmgBI CACGTC 1 cut(s) 2791
BmgT120I GGNCC 2 cut(s) 258, 931
BmiI GGNNCC 8 cut(s) 933, 1519, 1735, 1812, 2327, 2480, 2542, 2736
BmrFI CCNGG 3 cut(s) 96, 1245, 2075
BmsI GCATC 4 cut(s) 623, 2050, 2869, 3041
BmtI GCTAGC 1 cut(s) 141
BpiI GAAGAC 2 cut(s) 1107, 2084
BplI GAGNNNNNCTC 2 cut(s) 1483, 1515
BpmI CTGGAG 3 cut(s) 342, 1898, 2544
Bpu10I CCTNAGC 2 cut(s) 340, 2712
Bpu1102I GCTNAGC 1 cut(s) 2842
BpuEI CTTGAG 3 cut(s) 268, 322, 980
BpuMI CCSGG 1 cut(s) 96
BsaBI GATNNNNATC 1 cut(s) 280
BsaJI CCNNGG 5 cut(s) 775, 1243, 1423, 1657, 2073
Bsc4I CCNNNNNNNGG 7 cut(s) 293, 757, 1250, 1820, 2567, 2626, 2771
Bse1I ACTGG 1 cut(s) 1742
Bse3DI GCAATG 2 cut(s) 1042, 2935
Bse8I GATNNNNATC 1 cut(s) 280
BseBI CCWGG 2 cut(s) 1245, 2075
BseDI CCNNGG 5 cut(s) 775, 1243, 1423, 1657, 2073
BseGI GGATG 7 cut(s) 38, 186, 540, 1215, 1313, 2662, 2761
BseJI GATNNNNATC 1 cut(s) 280
BseLI CCNNNNNNNGG 7 cut(s) 293, 757, 1250, 1820, 2567, 2626, 2771
BseMI GCAATG 2 cut(s) 1042, 2935
BseMII CTCAG 9 cut(s) 464, 472, 1206, 1878, 2193, 2268, 2414, 2703, 2856
BseNI ACTGG 1 cut(s) 1742
BseRI GAGGAG 2 cut(s) 2107, 2547
BseXI GCAGC 2 cut(s) 2479, 2714
BsgI GTGCAG 1 cut(s) 359
Bsh1236I CGCG 3 cut(s) 442, 2046, 2280
BshFI GGCC 5 cut(s) 345, 513, 657, 2283, 2380
BshNI GGYRCC 2 cut(s) 1733, 1810
BsiSI CCGG 1 cut(s) 95
BslFI GGGAC 5 cut(s) 554, 626, 917, 1675, 2589
BslI CCNNNNNNNGG 7 cut(s) 293, 757, 1250, 1820, 2567, 2626, 2771
BsmAI GTCTC 3 cut(s) 98, 821, 2360
BsmFI GGGAC 5 cut(s) 554, 626, 917, 1675, 2589
BsmI GAATGC 2 cut(s) 1840, 2946
BsnI GGCC 5 cut(s) 345, 513, 657, 2283, 2380
Bsp1407I TGTACA 1 cut(s) 2604
Bsp1720I GCTNAGC 1 cut(s) 2842
Bsp19I CCATGG 1 cut(s) 1657
BspACI CCGC 8 cut(s) 256, 287, 370, 612, 789, 1443, 2280, 2846
BspANI GGCC 5 cut(s) 345, 513, 657, 2283, 2380
BspCNI CTCAG 9 cut(s) 463, 471, 1207, 1879, 2194, 2267, 2413, 2704, 2855
BspFNI CGCG 3 cut(s) 442, 2046, 2280
BspHI TCATGA 1 cut(s) 148
BspLI GGNNCC 8 cut(s) 933, 1519, 1735, 1812, 2327, 2480, 2542, 2736
BspMAI CTGCAG 1 cut(s) 28
BspMI ACCTGC 2 cut(s) 899, 3021
BspOI GCTAGC 1 cut(s) 141
BspT107I GGYRCC 2 cut(s) 1733, 1810
BsrDI GCAATG 2 cut(s) 1042, 2935
BsrGI TGTACA 1 cut(s) 2604
BsrI ACTGG 1 cut(s) 1742
BssECI CCNNGG 5 cut(s) 775, 1243, 1423, 1657, 2073
BssNAI GTATAC 1 cut(s) 1485
BssT1I CCWWGG 3 cut(s) 775, 1423, 1657
Bst1107I GTATAC 1 cut(s) 1485
Bst2UI CCWGG 2 cut(s) 1245, 2075
Bst4CI ACNGT 5 cut(s) 396, 640, 2146, 2234, 3074
Bst6I CTCTTC 3 cut(s) 76, 742, 2718
BstAPI GCANNNNNTGC 2 cut(s) 382, 1607
BstAUI TGTACA 1 cut(s) 2604
BstC8I GCNNGC 8 cut(s) 54, 139, 254, 374, 789, 1612, 1920, 2839
BstDSI CCRYGG 1 cut(s) 1657
BstEII GGTNACC 2 cut(s) 911, 1089
BstENI CCTNNNNNAGG 1 cut(s) 1248
BstF5I GGATG 7 cut(s) 38, 186, 540, 1215, 1313, 2662, 2761
BstFNI CGCG 3 cut(s) 442, 2046, 2280
BstHHI GCGC 1 cut(s) 2048
BstMAI GTCTC 3 cut(s) 98, 821, 2360
BstMWI GCNNNNNNNGC 6 cut(s) 382, 460, 1032, 1187, 1607, 2843
BstNI CCWGG 2 cut(s) 1245, 2075
BstNSI RCATGY 8 cut(s) 56, 219, 293, 1582, 1642, 1922, 2262, 2995
BstPI GGTNACC 2 cut(s) 911, 1089
BstSCI CCNGG 3 cut(s) 94, 1243, 2073
BstSFI CTRYAG 1 cut(s) 24
BstUI CGCG 3 cut(s) 442, 2046, 2280
BstV1I GCAGC 2 cut(s) 2479, 2714
BstV2I GAAGAC 2 cut(s) 1107, 2084
BstX2I RGATCY 5 cut(s) 275, 854, 1413, 2734, 3002
BstXI CCANNNNNNTGG 3 cut(s) 851, 923, 1954
BstYI RGATCY 5 cut(s) 275, 854, 1413, 2734, 3002
BstZ17I GTATAC 1 cut(s) 1485
BsuI GTATCC 3 cut(s) 1175, 2355, 2627
BsuRI GGCC 5 cut(s) 345, 513, 657, 2283, 2380
BtgI CCRYGG 1 cut(s) 1657
BtgZI GCGATG 1 cut(s) 2027
BtrI CACGTC 1 cut(s) 2791
BtsCI GGATG 7 cut(s) 38, 186, 540, 1215, 1313, 2662, 2761
BtsI GCAGTG 1 cut(s) 33
BtsIMutI CAGTG 3 cut(s) 33, 636, 856
BveI ACCTGC 2 cut(s) 899, 3021
Cac8I GCNNGC 8 cut(s) 54, 139, 254, 374, 789, 1612, 1920, 2839
CciI TCATGA 1 cut(s) 148
CfoI GCGC 1 cut(s) 2048
Cfr13I GGNCC 2 cut(s) 258, 931
CseI GACGC 1 cut(s) 870
Csp6I GTAC 7 cut(s) 1630, 2011, 2032, 2159, 2249, 2605, 2935
CviQI GTAC 7 cut(s) 1630, 2011, 2032, 2159, 2249, 2605, 2935
DraI TTTAAA 1 cut(s) 160
DraIII CACNNNGTG 2 cut(s) 416, 2597
EaeI YGGCCR 2 cut(s) 655, 2281
Eam1104I CTCTTC 3 cut(s) 76, 742, 2718
EarI CTCTTC 3 cut(s) 76, 742, 2718
Eco130I CCWWGG 3 cut(s) 775, 1423, 1657
Eco47I GGWCC 2 cut(s) 258, 931
Eco57I CTGAAG 1 cut(s) 1538
Eco91I GGTNACC 2 cut(s) 911, 1089
EcoNI CCTNNNNNAGG 1 cut(s) 1248
EcoO109I RGGNCCY 1 cut(s) 931
EcoO65I GGTNACC 2 cut(s) 911, 1089
EcoRI GAATTC 1 cut(s) 362
EcoRII CCWGG 2 cut(s) 1243, 2073
EcoT14I CCWWGG 3 cut(s) 775, 1423, 1657
EcoT22I ATGCAT 3 cut(s) 54, 1103, 1644
ErhI CCWWGG 3 cut(s) 775, 1423, 1657
FaqI GGGAC 5 cut(s) 554, 626, 917, 1675, 2589
FauI CCCGC 2 cut(s) 796, 1436
FauNDI CATATG 1 cut(s) 2892
FblI GTMKAC 1 cut(s) 1484
Fnu4HI GCNGC 5 cut(s) 287, 370, 2281, 2493, 2703
FokI GGATG 7 cut(s) 25, 173, 527, 1222, 1300, 2669, 2748
Fsp4HI GCNGC 5 cut(s) 287, 370, 2281, 2493, 2703
FspBI CTAG 6 cut(s) 138, 1302, 1355, 1586, 2330, 2856
GlaI GCGC 1 cut(s) 2047
GluI GCNGC 5 cut(s) 287, 370, 2281, 2493, 2703
GsuI CTGGAG 3 cut(s) 342, 1898, 2544
HaeIII GGCC 5 cut(s) 345, 513, 657, 2283, 2380
HapII CCGG 1 cut(s) 95
HgaI GACGC 1 cut(s) 870
HhaI GCGC 1 cut(s) 2048
Hin6I GCGC 1 cut(s) 2046
HinP1I GCGC 1 cut(s) 2046
HincII GTYRAC 1 cut(s) 2320
HindII GTYRAC 1 cut(s) 2320
HindIII AAGCTT 4 cut(s) 244, 956, 1256, 1868
HpaI GTTAAC 1 cut(s) 2320
HpaII CCGG 1 cut(s) 95
HphI GGTGA 5 cut(s) 402, 1601, 2375, 2485, 2609
Hpy166II GTNNAC 7 cut(s) 1485, 1496, 1685, 2320, 2589, 2605, 2967
Hpy8I GTNNAC 7 cut(s) 1485, 1496, 1685, 2320, 2589, 2605, 2967
Hpy99I CGWCG 3 cut(s) 228, 2178, 2656
HpyAV CCTTC 6 cut(s) 101, 1080, 1352, 1850, 1925, 2692
HpyCH4III ACNGT 5 cut(s) 396, 640, 2146, 2234, 3074
HpyCH4IV ACGT 3 cut(s) 555, 2157, 2790
HpyF10VI GCNNNNNNNGC 6 cut(s) 382, 460, 1032, 1187, 1607, 2843
HpySE526I ACGT 3 cut(s) 555, 2157, 2790
HspAI GCGC 1 cut(s) 2046
KspAI GTTAAC 1 cut(s) 2320
LmnI GCTCC 5 cut(s) 505, 1523, 2180, 2325, 2560
Lsp1109I GCAGC 2 cut(s) 2479, 2714
LweI GCATC 4 cut(s) 623, 2050, 2869, 3041
MaeI CTAG 6 cut(s) 138, 1302, 1355, 1586, 2330, 2856
MaeII ACGT 3 cut(s) 555, 2157, 2790
MaeIII GTNAC 9 cut(s) 211, 238, 556, 911, 1089, 1232, 1347, 1581, 2459
MfeI CAATTG 2 cut(s) 917, 2358
MflI RGATCY 5 cut(s) 275, 854, 1413, 2734, 3002
MlsI TGGCCA 1 cut(s) 657
MluNI TGGCCA 1 cut(s) 657
MlyI GAGTC 5 cut(s) 324, 576, 790, 823, 1995
MmeI TCCRAC 3 cut(s) 789, 2607, 2879
Mox20I TGGCCA 1 cut(s) 657
Mph1103I ATGCAT 3 cut(s) 54, 1103, 1644
MroXI GAANNNNTTC 1 cut(s) 1707
MscI TGGCCA 1 cut(s) 657
MslI CAYNNNNRTG 3 cut(s) 2457, 2766, 2893
Msp20I TGGCCA 1 cut(s) 657
MspA1I CMGCKG 1 cut(s) 2846
MspI CCGG 1 cut(s) 95
MspR9I CCNGG 3 cut(s) 96, 1245, 2075
MunI CAATTG 2 cut(s) 917, 2358
Mva1269I GAATGC 2 cut(s) 1840, 2946
MvaI CCWGG 2 cut(s) 1245, 2075
MvnI CGCG 3 cut(s) 442, 2046, 2280
MwoI GCNNNNNNNGC 6 cut(s) 382, 460, 1032, 1187, 1607, 2843
NciI CCSGG 1 cut(s) 96
NcoI CCATGG 1 cut(s) 1657
NdeI CATATG 1 cut(s) 2892
NheI GCTAGC 1 cut(s) 137
NlaIV GGNNCC 8 cut(s) 933, 1519, 1735, 1812, 2327, 2480, 2542, 2736
NmuCI GTSAC 3 cut(s) 238, 1232, 2459
NsiI ATGCAT 3 cut(s) 54, 1103, 1644
NspI RCATGY 8 cut(s) 56, 219, 293, 1582, 1642, 1922, 2262, 2995
OliI CACNNNNGTG 1 cut(s) 2893
PaeI GCATGC 2 cut(s) 56, 1922
PagI TCATGA 1 cut(s) 148
PciI ACATGT 3 cut(s) 215, 1578, 2991
PctI GAATGC 2 cut(s) 1840, 2946
PdmI GAANNNNTTC 1 cut(s) 1707
PfeI GAWTC 7 cut(s) 496, 761, 1666, 1780, 1978, 2112, 2785
PflMI CCANNNNNTGG 1 cut(s) 2567
PfoI TCCNGGA 1 cut(s) 94
PkrI GCNGC 5 cut(s) 288, 371, 2282, 2494, 2704
PleI GAGTC 5 cut(s) 323, 575, 789, 822, 1994
PpsI GAGTC 5 cut(s) 323, 575, 789, 822, 1994
PpuMI RGGWCCY 1 cut(s) 931
PscI ACATGT 3 cut(s) 215, 1578, 2991
PsiI TTATAA 1 cut(s) 1791
Psp5II RGGWCCY 1 cut(s) 931
Psp6I CCWGG 2 cut(s) 1243, 2073
PspEI GGTNACC 2 cut(s) 911, 1089
PspGI CCWGG 2 cut(s) 1243, 2073
PspN4I GGNNCC 8 cut(s) 933, 1519, 1735, 1812, 2327, 2480, 2542, 2736
PspPI GGNCC 2 cut(s) 258, 931
PspPPI RGGWCCY 1 cut(s) 931
PstI CTGCAG 1 cut(s) 28
PsuI RGATCY 5 cut(s) 275, 854, 1413, 2734, 3002
RsaI GTAC 7 cut(s) 1631, 2012, 2033, 2160, 2250, 2606, 2936
RsaNI GTAC 7 cut(s) 1630, 2011, 2032, 2159, 2249, 2605, 2935
RseI CAYNNNNRTG 3 cut(s) 2457, 2766, 2893
SatI GCNGC 5 cut(s) 287, 370, 2281, 2493, 2703
Sau96I GGNCC 2 cut(s) 258, 931
SchI GAGTC 5 cut(s) 324, 576, 790, 823, 1995
ScrFI CCNGG 3 cut(s) 96, 1245, 2075
SfaNI GCATC 4 cut(s) 623, 2050, 2869, 3041
SfcI CTRYAG 1 cut(s) 24
SinI GGWCC 2 cut(s) 258, 931
SmiMI CAYNNNNRTG 3 cut(s) 2457, 2766, 2893
SmlI CTYRAG 3 cut(s) 247, 301, 959
SmoI CTYRAG 3 cut(s) 247, 301, 959
SphI GCATGC 2 cut(s) 56, 1922
SsiI CCGC 8 cut(s) 256, 287, 370, 612, 789, 1443, 2280, 2846
SspI AATATT 5 cut(s) 533, 649, 1155, 2413, 2634
SspMI CTAG 6 cut(s) 138, 1302, 1355, 1586, 2330, 2856
StyD4I CCNGG 3 cut(s) 94, 1243, 2073
StyI CCWWGG 3 cut(s) 775, 1423, 1657
TaaI ACNGT 5 cut(s) 396, 640, 2146, 2234, 3074
TaiI ACGT 3 cut(s) 558, 2160, 2793
TaqI TCGA 4 cut(s) 1126, 2133, 2917, 3049
TaqII GACCGA 1 cut(s) 2665
TatI WGTACW 1 cut(s) 2604
TauI GCSGC 3 cut(s) 289, 372, 2283
TfiI GAWTC 7 cut(s) 496, 761, 1666, 1780, 1978, 2112, 2785
TscAI CASTG 3 cut(s) 33, 643, 856
TseFI GTSAC 3 cut(s) 238, 1232, 2459
TseI GCWGC 2 cut(s) 2492, 2702
Tsp45I GTSAC 3 cut(s) 238, 1232, 2459
TspGWI ACGGA 1 cut(s) 2669
TspRI CASTG 3 cut(s) 33, 643, 856
Van91I CCANNNNNTGG 1 cut(s) 2567
VpaK11BI GGWCC 2 cut(s) 258, 931
XagI CCTNNNNNAGG 1 cut(s) 1248
XceI RCATGY 8 cut(s) 56, 219, 293, 1582, 1642, 1922, 2262, 2995
XmiI GTMKAC 1 cut(s) 1484
XmnI GAANNNNTTC 1 cut(s) 1707
XspI CTAG 6 cut(s) 138, 1302, 1355, 1586, 2330, 2856
Zsp2I ATGCAT 3 cut(s) 54, 1103, 1644
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.