RchiOBHm_Chr1g0374381

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
62209585 .. 62211934
2350 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ59819

Sequence Viewer

Length: 2244 bp
ATGCCCCCAACCTTGTTCAGAACCCTTTTGAATCTCAAATATTTTTGCATTTCCGATAATCAGTTTACTGGATCACTTCCTCTGTCAATAAGCAATGCCACTAATTTAGTGGTTTTTTATGTTGAGGATAACAAACTAACAGGGCAAGTGCCAAATTTACAAAAGCTTTGTACCCTTGTGACATTCCATATTGCTGGTAATCATCTCGGAAGTGGCAGTGATGGGGACTTGAGTTTTTTCTCAGACTTGACCAATGCTACACAGTTGGTGTGGTTAATTATAGCATCCAACAATTTCGGAGGGACGCTGCCCACATCAATATCCAATCTCTCAACCCTTACAATTCTAGAAGTTGAAAGCAACCAATTACATGGAAGCATCCCTGCAGGGATAGGGAATCTGGTCAACATGAAATCATTGGCTTTGTCTGGTAACATGTTCACAAGTAACATTCCCACTGACATCGGGAAACTTTCAGGTCTTGGGGGATTGCATTTTCAAAACAACGGATTATCAGGGAGCCTACCATTTTCTCTAGGAAATCTGACATCGTTAGTTTATCTCGAAATGCAAGGAAATAATTTTAATGGTACCATCCCTACAAGCCTTGGGGAATGCCATTCATTGCTAGTGTTTGATCTTTCACGCAATAATCTTAGTGGCCACATACCTCCACAAGTTATTGGTGTTCCTTCTTTATCAATATCTTTGAACTTGTCTGAAAATCGTCTCAGTGGTTCCCTTCCCTTGGAGCTAGGAAAGTTAAAAAGTCTAGGTGAGCTGGATCTCTCTAATAATATGATATCAGGAAAACTTCCTAGTAGCCTTGGCAGTTGCCTGAGTTTAGAAATCCTGCACTTGGAAGGAAACTTCTTTGATGGCTCCATTCCTTCGGCTATGGTTTCCTTGAGAGGGATTCGAGATTTAGACCTTTCGCGCAACAATCTCTCCGGTGAAATTCCTGAATTTTTGGCAGGGTTTAGAGACTTGGAGAAACTTAACCTGTCTTTCAATGACTTTTGGGGTGCAGTATCAATTAAAGGTGTATTTAACAATGCAAGTGCTACTTCAGTTGTCGGAAACACTAGGCTCTGCGGAGGTATTTCTGATCTCCACCTTCCAAAGTGCAAGTCTAAAGAATCGACGTCTCGTAGCATGAAACTAACAATCTTATTAGTATCAGCATTCACTCTTCTTGGAATAGCTATGCTCCTGACATTTCTGTTTCTTTGTTTCTCCAAAAAGAAATGCAAAGTAACTTCATCAAGCACATTTGCTGACTCTATTTTGCAAGTGTCCTATAATACTCTCTTGAAAGCTACTGATGGCTTCTCTGCAACAAATTTGATTGGTGCGGGTAGTTTTGGGTCTGTCTACAAAGGAGTTCTCGGCGAAGATGGAGCTCAGCTTGTTGCTGTGAAGGTGTTTGACATGTTACGCCGGGGAGCTTCCAAGAGTTTCCTAGCCGAATGTGAGGCACTCAGAAATATCAGACACCGAAATCTAGTCCCGATTATAACTGCATGTTCGAGTGTTGACTTTCGTGGTAATGATTTCAAAGCTTTGGTTTACGAGTTCATGGAGAATGGGAGCTTAGAGGAGTGGCTGCATCCAACTACTGGGACAGAAGACGCACCGATGAATTTAAGTCTCGTTCAGAGGCTAGACATTGCCATTGACGTTGCTTGTGCACTGGATTATCTTCATAATCATTGCGAAACACCAATAGTTCATTGTGATCTCAAGCCGAGCAATGTTCTTTTGGACAATGACTTGACTGGACATGTTGCTGACTTTGGATTAGCTAGATTCCTCTCAAGACTAGCCAATAACGTTTCAGCAAATCAATCAAGTGACATTGGAATAAGAGGGACTGTTGGTTATGCTGCTCCAGAGTATGGAATGGGAAGTGAGGTGTCAACATATGGAGATGTCTACAGCTTCGGCATTCTCTTGTTAGAGATGTTTACAGGGAAGAGACCCACCGACCACATGTTCGTGGACGGTTTGAACCTTCACAAGTTTGTAAAAAGGGCTTTCCCCGAGCGTGTTTCAGAGATTGCAGATTCATCACTTGTTCAAGTAGGCAAACCCAGCCAGAGCACCAATGATGCTCTTGAGGAATGCTTGAGTTCAATACTGGGAATTGGAGTTGCATGCTCTGTGGAATTCCCAATAGACCGAGAGAATATCGGTGATGCTGTAGCTGAACTGAAAAGAATTCGAGCCACTCTTGTTGGATAG

Protein Analysis

747

Amino Acids

80.25

Weight (kDa)

5.56

Isoelectric Point (pI)

30.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 105 - 212 5.2e-09 Leucine-rich repeat region
LRR_14 PF23598 201 - 338 8.1e-07 Leucine-rich repeat region
LRR_8 PF13855 281 - 340 3.4e-07 Leucine rich repeat
Pkinase PF00069 446 - 710 8.3e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 447 - 665 1.6e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1517
AatII GACGTC 1 cut(s) 1148
Acc65I GGTACC 1 cut(s) 590
AccB1I GGYRCC 1 cut(s) 590
AccB7I CCANNNNNTGG 2 cut(s) 1619, 1898
AccI GTMKAC 2 cut(s) 1374, 1935
AccII CGCG 1 cut(s) 937
AciI CCGC 2 cut(s) 1095, 1355
AclI AACGTT 1 cut(s) 1833
AclWI GGATC 2 cut(s) 79, 792
AcoI YGGCCR 1 cut(s) 661
AcsI RAATTY 7 cut(s) 154, 957, 965, 1342, 1642, 2168, 2220
AcuI CTGAAG 1 cut(s) 1053
AcyI GRCGYC 1 cut(s) 1145
AfaI GTAC 2 cut(s) 172, 592
AfiI CCNNNNNNNGG 5 cut(s) 748, 859, 912, 1619, 1898
AflIII ACRYGT 4 cut(s) 435, 1431, 1783, 1992
Alw21I GWGCWC 3 cut(s) 1405, 1693, 2105
Alw26I GTCTC 5 cut(s) 734, 978, 1152, 1655, 1972
Alw44I GTGCAC 1 cut(s) 1689
AlwI GGATC 2 cut(s) 79, 792
Ama87I CYCGRG 1 cut(s) 2042
AoxI GGCC 1 cut(s) 661
ApaLI GTGCAC 1 cut(s) 1689
ApeKI GCWGC 3 cut(s) 307, 1606, 1886
ApoI RAATTY 7 cut(s) 154, 957, 965, 1342, 1642, 2168, 2220
ArsI GACNNNNNNTTYG 4 cut(s) 1115, 1147, 1979, 2011
Asp718I GGTACC 1 cut(s) 590
AspLEI GCGC 1 cut(s) 939
AsuC2I CCSGG 1 cut(s) 1442
AsuHPI GGTGA 3 cut(s) 788, 965, 2207
AvaI CYCGRG 1 cut(s) 2042
BaeGI GKGCMC 1 cut(s) 1693
BalI TGGCCA 1 cut(s) 663
BanI GGYRCC 1 cut(s) 590
BanII GRGCYC 1 cut(s) 1405
BbsI GAAGAC 1 cut(s) 1635
Bbv12I GWGCWC 3 cut(s) 1405, 1693, 2105
BbvI GCAGC 3 cut(s) 294, 1593, 1873
BccI CCATC 5 cut(s) 215, 602, 872, 1319, 1391
BcnI CCSGG 1 cut(s) 1442
BcoDI GTCTC 5 cut(s) 734, 978, 1152, 1655, 1972
BfmI CTRYAG 3 cut(s) 384, 1936, 2202
BisI GCNGC 3 cut(s) 308, 1607, 1887
BlpI GCTNAGC 1 cut(s) 1404
BlsI GCNGC 3 cut(s) 309, 1608, 1888
Bme1390I CCNGG 1 cut(s) 1442
BmeT110I CYCGRG 1 cut(s) 2042
BmiI GGNNCC 4 cut(s) 521, 592, 739, 883
BmrFI CCNGG 1 cut(s) 1442
BmrI ACTGGG 2 cut(s) 1629, 2150
BmsI GCATC 5 cut(s) 293, 387, 1618, 2101, 2188
BmuI ACTGGG 2 cut(s) 1629, 2150
BpiI GAAGAC 1 cut(s) 1635
BpmI CTGGAG 1 cut(s) 1875
Bpu1102I GCTNAGC 1 cut(s) 1404
BpuEI CTTGAG 6 cut(s) 250, 928, 1727, 1801, 2138, 2149
BpuMI CCSGG 1 cut(s) 1442
BsaHI GRCGYC 1 cut(s) 1145
BsaI GGTCTC 1 cut(s) 1972
BsaJI CCNNGG 4 cut(s) 607, 747, 826, 1441
BsaWI WCCGGW 1 cut(s) 950
BsaXI ACNNNNNCTCC 2 cut(s) 932, 962
Bsc4I CCNNNNNNNGG 5 cut(s) 748, 859, 912, 1619, 1898
Bse1I ACTGG 5 cut(s) 73, 1624, 1698, 1783, 2145
Bse3DI GCAATG 5 cut(s) 100, 623, 1668, 1711, 1759
BseDI CCNNGG 4 cut(s) 607, 747, 826, 1441
BseGI GGATG 4 cut(s) 284, 378, 594, 1609
BseLI CCNNNNNNNGG 5 cut(s) 748, 859, 912, 1619, 1898
BseMI GCAATG 5 cut(s) 100, 623, 1668, 1711, 1759
BseMII CTCAG 5 cut(s) 255, 745, 830, 1418, 1495
BseNI ACTGG 5 cut(s) 73, 1624, 1698, 1783, 2145
BseRI GAGGAG 1 cut(s) 1613
BseSI GKGCMC 1 cut(s) 1693
BseXI GCAGC 3 cut(s) 294, 1593, 1873
BseYI CCCAGC 1 cut(s) 2093
BsgI GTGCAG 2 cut(s) 839, 1047
Bsh1236I CGCG 1 cut(s) 937
BshFI GGCC 1 cut(s) 663
BshNI GGYRCC 1 cut(s) 590
BsiHKAI GWGCWC 3 cut(s) 1405, 1693, 2105
BsiHKCI CYCGRG 1 cut(s) 2042
BsiSI CCGG 2 cut(s) 951, 1441
BslFI GGGAC 5 cut(s) 239, 316, 1493, 1636, 1885
BslI CCNNNNNNNGG 5 cut(s) 748, 859, 912, 1619, 1898
BsmAI GTCTC 5 cut(s) 734, 978, 1152, 1655, 1972
BsmBI CGTCTC 2 cut(s) 734, 1152
BsmFI GGGAC 5 cut(s) 239, 316, 1493, 1636, 1885
BsmI GAATGC 4 cut(s) 620, 1184, 1947, 2129
BsnI GGCC 1 cut(s) 663
Bso31I GGTCTC 1 cut(s) 1972
BsoBI CYCGRG 1 cut(s) 2042
Bsp1286I GDGCHC 3 cut(s) 1405, 1693, 2105
Bsp143I GATC 5 cut(s) 71, 637, 784, 1108, 1738
Bsp1720I GCTNAGC 1 cut(s) 1404
BspACI CCGC 2 cut(s) 1095, 1355
BspANI GGCC 1 cut(s) 663
BspCNI CTCAG 5 cut(s) 254, 744, 831, 1417, 1494
BspFNI CGCG 1 cut(s) 937
BspLI GGNNCC 4 cut(s) 521, 592, 739, 883
BspMAI CTGCAG 1 cut(s) 388
BspPI GGATC 2 cut(s) 79, 792
BspT107I GGYRCC 1 cut(s) 590
BspTNI GGTCTC 1 cut(s) 1972
BsrDI GCAATG 5 cut(s) 100, 623, 1668, 1711, 1759
BsrI ACTGG 5 cut(s) 73, 1624, 1698, 1783, 2145
BssECI CCNNGG 4 cut(s) 607, 747, 826, 1441
BssMI GATC 5 cut(s) 71, 637, 784, 1108, 1738
BssNI GRCGYC 1 cut(s) 1145
BssT1I CCWWGG 3 cut(s) 607, 747, 826
Bst4CI ACNGT 3 cut(s) 264, 1876, 2006
Bst6I CTCTTC 2 cut(s) 1197, 1970
BstACI GRCGYC 1 cut(s) 1145
BstC8I GCNNGC 1 cut(s) 2158
BstDEI CTNAG 7 cut(s) 241, 656, 731, 839, 1404, 1481, 1594
BstF5I GGATG 4 cut(s) 284, 378, 594, 1609
BstFNI CGCG 1 cut(s) 937
BstHHI GCGC 1 cut(s) 939
BstKTI GATC 5 cut(s) 74, 640, 787, 1111, 1741
BstMAI GTCTC 5 cut(s) 734, 978, 1152, 1655, 1972
BstMBI GATC 5 cut(s) 71, 637, 784, 1108, 1738
BstMWI GCNNNNNNNGC 1 cut(s) 2094
BstNSI RCATGY 6 cut(s) 439, 1435, 1527, 1787, 1996, 2160
BstSCI CCNGG 1 cut(s) 1440
BstSFI CTRYAG 3 cut(s) 384, 1936, 2202
BstSLI GKGCMC 1 cut(s) 1693
BstUI CGCG 1 cut(s) 937
BstV1I GCAGC 3 cut(s) 294, 1593, 1873
BstV2I GAAGAC 1 cut(s) 1635
BstX2I RGATCY 1 cut(s) 784
BstXI CCANNNNNNTGG 2 cut(s) 194, 371
BstYI RGATCY 1 cut(s) 784
BsuRI GGCC 1 cut(s) 663
BtsCI GGATG 4 cut(s) 284, 378, 594, 1609
BtsI GCAGTG 1 cut(s) 223
BtsIMutI CAGTG 4 cut(s) 223, 456, 739, 1691
Cac8I GCNNGC 1 cut(s) 2158
CfoI GCGC 1 cut(s) 939
CseI GACGC 2 cut(s) 313, 1640
Csp6I GTAC 2 cut(s) 171, 591
CspCI CAANNNNNGTGG 1 cut(s) 2218
CviQI GTAC 2 cut(s) 171, 591
DdeI CTNAG 7 cut(s) 241, 656, 731, 839, 1404, 1481, 1594
DpnI GATC 5 cut(s) 73, 639, 786, 1110, 1740
DpnII GATC 5 cut(s) 71, 637, 784, 1108, 1738
EaeI YGGCCR 1 cut(s) 661
Eam1104I CTCTTC 2 cut(s) 1197, 1970
EarI CTCTTC 2 cut(s) 1197, 1970
Ecl136II GAGCTC 1 cut(s) 1403
Eco130I CCWWGG 3 cut(s) 607, 747, 826
Eco24I GRGCYC 1 cut(s) 1405
Eco31I GGTCTC 1 cut(s) 1972
Eco32I GATATC 1 cut(s) 804
Eco53kI GAGCTC 1 cut(s) 1403
Eco57I CTGAAG 1 cut(s) 1053
Eco88I CYCGRG 1 cut(s) 2042
EcoICRI GAGCTC 1 cut(s) 1403
EcoRI GAATTC 2 cut(s) 2168, 2220
EcoRV GATATC 1 cut(s) 804
EcoT14I CCWWGG 3 cut(s) 607, 747, 826
EcoT38I GRGCYC 1 cut(s) 1405
ErhI CCWWGG 3 cut(s) 607, 747, 826
Esp3I CGTCTC 2 cut(s) 734, 1152
FalI AAGNNNNNCTT 2 cut(s) 1051, 1083
FaqI GGGAC 5 cut(s) 239, 316, 1493, 1636, 1885
FauI CCCGC 1 cut(s) 1348
FauNDI CATATG 1 cut(s) 1924
FblI GTMKAC 2 cut(s) 1374, 1935
Fnu4HI GCNGC 3 cut(s) 308, 1607, 1887
FokI GGATG 4 cut(s) 271, 365, 581, 1596
FriOI GRGCYC 1 cut(s) 1405
Fsp4HI GCNGC 3 cut(s) 308, 1607, 1887
GlaI GCGC 1 cut(s) 938
GluI GCNGC 3 cut(s) 308, 1607, 1887
GsaI CCCAGC 1 cut(s) 2097
GsuI CTGGAG 1 cut(s) 1875
HaeIII GGCC 1 cut(s) 663
HapII CCGG 2 cut(s) 951, 1441
HgaI GACGC 2 cut(s) 313, 1640
HhaI GCGC 1 cut(s) 939
Hin1I GRCGYC 1 cut(s) 1145
Hin6I GCGC 1 cut(s) 937
HinP1I GCGC 1 cut(s) 937
HincII GTYRAC 3 cut(s) 406, 1537, 1920
HindII GTYRAC 3 cut(s) 406, 1537, 1920
HindIII AAGCTT 2 cut(s) 164, 1560
HinfI GANTC 7 cut(s) 31, 397, 916, 1139, 1280, 1809, 2066
HpaII CCGG 2 cut(s) 951, 1441
HphI GGTGA 3 cut(s) 788, 965, 2207
Hpy99I CGWCG 1 cut(s) 1147
HpyAV CCTTC 7 cut(s) 702, 752, 857, 900, 1127, 1414, 2024
HpyCH4III ACNGT 3 cut(s) 264, 1876, 2006
HpyCH4IV ACGT 3 cut(s) 1145, 1680, 1833
HpyF10VI GCNNNNNNNGC 1 cut(s) 2094
HpyF3I CTNAG 7 cut(s) 241, 656, 731, 839, 1404, 1481, 1594
HpySE526I ACGT 3 cut(s) 1145, 1680, 1833
Hsp92I GRCGYC 1 cut(s) 1145
HspAI GCGC 1 cut(s) 937
KpnI GGTACC 1 cut(s) 594
Kzo9I GATC 5 cut(s) 71, 637, 784, 1108, 1738
LmnI GCTCC 8 cut(s) 519, 751, 887, 1215, 1400, 1445, 1590, 1894
Lsp1109I GCAGC 3 cut(s) 294, 1593, 1873
LweI GCATC 5 cut(s) 293, 387, 1618, 2101, 2188
MaeII ACGT 3 cut(s) 1145, 1680, 1833
MaeIII GTNAC 6 cut(s) 178, 431, 446, 1255, 1434, 1853
MalI GATC 5 cut(s) 73, 639, 786, 1110, 1740
MboI GATC 5 cut(s) 71, 637, 784, 1108, 1738
MboII GAAGA 5 cut(s) 1184, 1406, 1640, 1694, 1987
MflI RGATCY 1 cut(s) 784
MhlI GDGCHC 3 cut(s) 1405, 1693, 2105
MlsI TGGCCA 1 cut(s) 663
MluNI TGGCCA 1 cut(s) 663
MlyI GAGTC 1 cut(s) 1274
MmeI TCCRAC 4 cut(s) 312, 1057, 1637, 2218
Mox20I TGGCCA 1 cut(s) 663
MscI TGGCCA 1 cut(s) 663
MseI TTAA 7 cut(s) 275, 585, 764, 999, 1038, 1050, 1646
MslI CAYNNNNRTG 1 cut(s) 1997
Msp20I TGGCCA 1 cut(s) 663
MspI CCGG 2 cut(s) 951, 1441
MspR9I CCNGG 1 cut(s) 1442
Mva1269I GAATGC 4 cut(s) 620, 1184, 1947, 2129
MvnI CGCG 1 cut(s) 937
MwoI GCNNNNNNNGC 1 cut(s) 2094
NciI CCSGG 1 cut(s) 1442
NdeI CATATG 1 cut(s) 1924
NdeII GATC 5 cut(s) 71, 637, 784, 1108, 1738
NlaIV GGNNCC 4 cut(s) 521, 592, 739, 883
NmeAIII GCCGAG 2 cut(s) 1368, 1773
NmuCI GTSAC 2 cut(s) 178, 1853
NspI RCATGY 6 cut(s) 439, 1435, 1527, 1787, 1996, 2160
PaeI GCATGC 1 cut(s) 2160
PciI ACATGT 4 cut(s) 435, 1431, 1783, 1992
PctI GAATGC 4 cut(s) 620, 1184, 1947, 2129
PfeI GAWTC 6 cut(s) 31, 397, 916, 1139, 1809, 2066
PflMI CCANNNNNTGG 2 cut(s) 1619, 1898
PkrI GCNGC 3 cut(s) 309, 1608, 1888
PleI GAGTC 1 cut(s) 1274
PpsI GAGTC 1 cut(s) 1274
PscI ACATGT 4 cut(s) 435, 1431, 1783, 1992
PsiI TTATAA 1 cut(s) 1517
Psp124BI GAGCTC 1 cut(s) 1405
Psp1406I AACGTT 1 cut(s) 1833
PspFI CCCAGC 1 cut(s) 2093
PspN4I GGNNCC 4 cut(s) 521, 592, 739, 883
PstI CTGCAG 1 cut(s) 388
PsuI RGATCY 1 cut(s) 784
RsaI GTAC 2 cut(s) 172, 592
RsaNI GTAC 2 cut(s) 171, 591
RseI CAYNNNNRTG 1 cut(s) 1997
SacI GAGCTC 1 cut(s) 1405
SaqAI TTAA 7 cut(s) 275, 585, 764, 999, 1038, 1050, 1646
SatI GCNGC 3 cut(s) 308, 1607, 1887
Sau3AI GATC 5 cut(s) 71, 637, 784, 1108, 1738
SbfI CCTGCAGG 1 cut(s) 388
SchI GAGTC 1 cut(s) 1274
ScrFI CCNGG 1 cut(s) 1442
SdaI CCTGCAGG 1 cut(s) 388
SduI GDGCHC 3 cut(s) 1405, 1693, 2105
SfaNI GCATC 5 cut(s) 293, 387, 1618, 2101, 2188
SfcI CTRYAG 3 cut(s) 384, 1936, 2202
SmiMI CAYNNNNRTG 1 cut(s) 1997
SmlI CTYRAG 6 cut(s) 229, 907, 1742, 1816, 2117, 2128
SmoI CTYRAG 6 cut(s) 229, 907, 1742, 1816, 2117, 2128
SphI GCATGC 1 cut(s) 2160
Sse8387I CCTGCAGG 1 cut(s) 388
SsiI CCGC 2 cut(s) 1095, 1355
SspI AATATT 1 cut(s) 41
SstI GAGCTC 1 cut(s) 1405
StyD4I CCNGG 1 cut(s) 1440
StyI CCWWGG 3 cut(s) 607, 747, 826
TaaI ACNGT 3 cut(s) 264, 1876, 2006
TaiI ACGT 3 cut(s) 1148, 1683, 1836
TaqI TCGA 5 cut(s) 564, 919, 1142, 1529, 2224
TaqII GACCGA 1 cut(s) 2196
TfiI GAWTC 6 cut(s) 31, 397, 916, 1139, 1809, 2066
Tru1I TTAA 7 cut(s) 275, 585, 764, 999, 1038, 1050, 1646
Tru9I TTAA 7 cut(s) 275, 585, 764, 999, 1038, 1050, 1646
TscAI CASTG 4 cut(s) 223, 463, 739, 1698
TseFI GTSAC 2 cut(s) 178, 1853
TseI GCWGC 3 cut(s) 307, 1606, 1886
Tsp45I GTSAC 2 cut(s) 178, 1853
TspDTI ATGAA 9 cut(s) 425, 612, 1172, 1251, 1567, 1655, 1694, 1721, 2058
TspGWI ACGGA 1 cut(s) 522
TspRI CASTG 4 cut(s) 223, 463, 739, 1698
Van91I CCANNNNNTGG 2 cut(s) 1619, 1898
VneI GTGCAC 1 cut(s) 1689
XapI RAATTY 7 cut(s) 154, 957, 965, 1342, 1642, 2168, 2220
XbaI TCTAGA 1 cut(s) 346
XceI RCATGY 6 cut(s) 439, 1435, 1527, 1787, 1996, 2160
XcmI CCANNNNNNNNNTGG 1 cut(s) 106
XmiI GTMKAC 2 cut(s) 1374, 1935
ZraI GACGTC 1 cut(s) 1146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.