Rw1G010620
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Reverse (-)
23806973 .. 23810175
3203 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G010620.1

Sequence Viewer

Length: 2958 bp
ATGGGGGGAGTTTTGGTTATGAAATTGGTTTTGATAGCTACATTAGTTTTAAATGCAATGTCCATTTTCTGTTGTAGCTCCATGCAATTGAACCATCCGAGACTCCGAGGGAATGAGACGGATAGGTTGGCACTGCTAGCAATCAAAGCTCAAATACAACACGATCCGAACCGGGTCACAAGCTCATGGAATGAAACCCTTCACTTTTGCATGTGGCACGGCATCACCTGCAGTCGACGACATCGCCAAAGGGTGACGAAGCTGCAACTAGGGTCAGCATTGGTGGGATCCATATCTCCACACATAGGAAATCTAAGCTTCTTAAGAGTGCTAAATCTCATCAACAATAGTTTCACTCATCAAATCCCTCCTCAAATTGGCCATTTGCACAGATTGCAGGTATTGATTCTATACAATAGCTCATTTACCGGCACCATTCCTGCCAATATATCCAATTGCTTCAAGCTCATCACTCTCCGTCTTGATAGAAACAATCTAGTGGGTAAAATTCCTCCTGAATTGAGTTCTTTGTCGAAGCTTCAACAGATTAATTTGCAATTTAACAATTTAACAGGAGAGATCCATCCTTCTTTAGGGAACCTTTCATCTCTCGAGATGTTTGCTACAACTACTAATAACTTAGAAGGAAGCATCCCTAGTTCTCTATGCCAGTTAAAAAAACTAACACTTTTTTATTTTGCCGAAAATAGGCTATCTGGTATCATCCCTTCCTGCTTTTATAACCTCTCTGGTATAGTTGAATTAGAGGTATCAGTAAACCAAATTCAAGGAAGTCTTCCCTCAAACTTGAGCAATGCTTTACCCAACCTCCAATACTTTAACGTTGCTGATAATCAATTCACTGGGGCCATCCCTTGGTCAATATCGAATGCTACAAATCTTGTGTCCTTTCAATGTTCACTCAACAAACTAACTGGTCAGGTGCCAAATTTACAAAAGCTTCATAACCTTGTGATATTCGCAGTCGGAAATAATAATCTTGGAAGCGGTAAACATGGTGACTTGAGTTTTGTCTCAGAATTGATCAATGCCACACAACTAACTCTGTTTGGGTTTGGCTACAACAATTTTGGAGGAACATTGCCCACATCAATATCGAACCTCTCAACCAATCTCCAAATCCTTTCAACTGTAGGAAACCACCTACAGGGAAGCATCCCAACTGGGTTCGGGAATCTTCTGAACTTGGTAGGACTGGATATGGGGGGAAACAACTTCACAGGTAGCATCCCTACTGACATTGGGAGGCTTTCAAGGCTTGGGGTATTGTATCTTGATGGAAACAAATTATCGGGGACCATTCCGTCCTCTCTTGGAAATTTAACATTGTTAACTCGTCTTTTCTTGCAAGGGAATAATCTCAATGATAGCATCCCTTCAAGCCTAGGAGAATGTCACGGGTTGCTACAGTTGGATCTTTCTCAAAATAACTTAGATGGCACAATACCTCAACAACTACTTATTGGCCTCCTCTCTTTATCAATTTCTTTCAACTTGGCAATAAACCAGCTTACTGGTTTCCTTCCCGTTGAGATTGGAAAGTTGAAGAATCTAGCATCCCTTGACATTTCGTACAACATGTTATCAGGACAACTTCCTAGTAGCCTCGGTAGTTGTGAGAGTTTGGAAGTCTTACACTTACAAGGTAACTTTTTGGAAGGACTCATTCCTTCATCTATGAAGGAATTGAGAGGGATTCGAGATGTAGACCTTTCCCGCAACAATTTGTCAGGAGATATTCCACAGTTTCTTGAGCATCTGAACTTGGAGAACCTGAACCTCTCCTTCAACCAATTTTGGGGAGCAGTACCAACTGGTGGTGTTTTCAAGAATGCAAGTGCGACTTCAGTTTCTGGAAATGCTGGACTTTGTGGAGGTATGGCTAGTCTTCGACTTCCTCTGTGCAAGCTAAATGAGTCTAAAGGAGAAGGGCTGTCTCGTAGAATGAAACTAATGATCTCTTTAGTCTCCGGAGCTACCGATGGTTTTTCTTCAGCTAATTTAATCGGTGTGGGTGCTTTTGGGTATGTGTACAAAGGAATCCTTGCTGATGATAGAGTTGTTGTCGCTGTGAAGGTGCTTAACATGTTACACCGGGGAGCAACTAAGAGTTTCATGGCCGAATGTGAGGCGTTGAGAAATATTAGACATCGAAATTTGGTCAAGATCTTAACTGCATGTTCAAGTACTGATTTTGGCGGCAATGATTTCAAGGCTCTTGTTTACGAGTTCATGGACAACGGGAGCTTGGAAGAGTGGTTGCATCCATCTATTGGAACTGGAGAGGTAACAGAAGCGCCCAAAATTTTAAATCTTATTCAGAGGCTCAACATTGCCATTGATGTTGCTAGTGCATTGGATTATCTTCACAACCATTGTGAAACACCGATCGTTCATTGTGATCTCAAGCCAAGTAATGTTCTTTTGGATGGTGACCTGACTGGACATGTTTCCGACTTTGGGTTGTCAAGGTTTCTCTCAGAACCAATCACGAGTGTTTCTGGAAATCAATCAAGCTCTATTGGAATTAGAGGATCGGTTGGTTATGCTGCACCAGAGTATGGCATGGGAAGTGAGGTATCCACATATGGGGATGTCTATAGCTTCGGCATTCTCTTGTTAGAAATGTTTACGGGGAAGCGACCCACTGATCACATGTTCAGTGACAACTTGAATCTTCATAATTACGTAAAGTCAACTATCCCTGAACTTGTTTTAGAGATTTCAGAATCACTAGTTCTTCAAGAAGGCACTGCCAATGTCGCTGAAGCTCACAGGCACAGCCGATTGAGTGTGAGAGCACAGAAAATTGAAGAGTGCTTGACTCTGATACTTGGTATAGGAATTGCATGTTCTGTTGAATCCCCCACAAACAGAAAGACTATAAGTGATGCTGCATCCGAATTGCAATCCATTAGATGCAATCTTCTCAACTAG

Protein Analysis

985

Amino Acids

106.6

Weight (kDa)

6.53

Isoelectric Point (pI)

32.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 39 - 78 5.4e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 84 - 281 2.5e-14 Leucine-rich repeat region
LRR_8 PF13855 548 - 606 8.9e-07 Leucine rich repeat
Pkinase PF00069 672 - 905 6.1e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 674 - 904 1e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 741
AarI CACCTGC 1 cut(s) 236
AasI GACNNNNNNGTC 1 cut(s) 1324
Acc36I ACCTGC 2 cut(s) 236, 388
AccB1I GGYRCC 2 cut(s) 431, 943
AccB7I CCANNNNNTGG 4 cut(s) 876, 1838, 2294, 2582
AccI GTMKAC 2 cut(s) 235, 1728
AccIII TCCGGA 1 cut(s) 1991
AciI CCGC 3 cut(s) 1008, 1738, 2220
AclI AACGTT 1 cut(s) 843
AclWI GGATC 6 cut(s) 158, 282, 295, 574, 1443, 2563
AcoI YGGCCR 2 cut(s) 379, 2139
AcsI RAATTY 6 cut(s) 507, 783, 949, 1339, 2176, 2325
AcuI CTGAAG 3 cut(s) 1851, 1998, 2808
AfaI GTAC 4 cut(s) 1595, 1830, 2054, 2209
AflII CTTAAG 1 cut(s) 322
AflIII ACRYGT 4 cut(s) 1599, 2106, 2467, 2676
AhlI ACTAGT 1 cut(s) 2755
Alw21I GWGCWC 1 cut(s) 2824
Alw26I GTCTC 5 cut(s) 94, 110, 1039, 1962, 1993
AlwI GGATC 6 cut(s) 158, 282, 295, 574, 1443, 2563
AlwNI CAGNNNCTG 1 cut(s) 1874
Ama87I CYCGRG 1 cut(s) 611
Aor13HI TCCGGA 1 cut(s) 1991
AoxI GGCC 4 cut(s) 379, 867, 1486, 2139
ApeKI GCWGC 3 cut(s) 262, 2570, 2915
ApoI RAATTY 6 cut(s) 507, 783, 949, 1339, 2176, 2325
ArsI GACNNNNNNTTYG 4 cut(s) 890, 922, 1013, 1045
AseI ATTAAT 1 cut(s) 549
Asp700I GAANNNNTTC 1 cut(s) 198
AspA2I CCTAGG 1 cut(s) 1405
AspLEI GCGC 1 cut(s) 2320
AspS9I GGNCC 2 cut(s) 867, 1317
AsuC2I CCSGG 2 cut(s) 173, 2117
AsuHPI GGTGA 4 cut(s) 217, 265, 1031, 2465
AsuNHI GCTAGC 1 cut(s) 136
AvaI CYCGRG 1 cut(s) 611
AvaII GGWCC 1 cut(s) 1317
AvrII CCTAGG 1 cut(s) 1405
BalI TGGCCA 1 cut(s) 381
BamHI GGATCC 1 cut(s) 287
BanI GGYRCC 2 cut(s) 431, 943
BarI GAAGNNNNNNTAC 2 cut(s) 712, 744
BauI CACGAG 1 cut(s) 2512
BbsI GAAGAC 2 cut(s) 788, 1901
Bbv12I GWGCWC 1 cut(s) 2824
BbvI GCAGC 3 cut(s) 249, 2557, 2902
BccI CCATC 8 cut(s) 102, 591, 878, 1292, 1451, 1997, 2296, 2444
BceAI ACGGC 1 cut(s) 235
BcgI CGANNNNNNTGC 2 cut(s) 602, 636
BciVI GTATCC 1 cut(s) 2611
BclI TGATCA 2 cut(s) 1044, 2671
BcnI CCSGG 2 cut(s) 173, 2117
BcoDI GTCTC 5 cut(s) 94, 110, 1039, 1962, 1993
BcuI ACTAGT 1 cut(s) 2755
BfmI CTRYAG 5 cut(s) 229, 1152, 1166, 1427, 2620
BfoI RGCGCY 1 cut(s) 2321
BfrI CTTAAG 1 cut(s) 322
BfuAI ACCTGC 2 cut(s) 236, 388
BfuI GTATCC 1 cut(s) 2611
BglII AGATCT 1 cut(s) 2187
BisI GCNGC 4 cut(s) 263, 2221, 2571, 2916
BlnI CCTAGG 1 cut(s) 1405
BlsI GCNGC 4 cut(s) 264, 2222, 2572, 2917
BmcAI AGTACT 1 cut(s) 2209
Bme1390I CCNGG 2 cut(s) 173, 2117
Bme18I GGWCC 1 cut(s) 1317
BmeT110I CYCGRG 1 cut(s) 611
BmgT120I GGNCC 2 cut(s) 867, 1317
BmiI GGNNCC 6 cut(s) 289, 433, 599, 868, 945, 1318
BmrFI CCNGG 2 cut(s) 173, 2117
BmrI ACTGGG 2 cut(s) 873, 1194
BmtI GCTAGC 1 cut(s) 140
BmuI ACTGGG 2 cut(s) 873, 1194
BpiI GAAGAC 2 cut(s) 788, 1901
BpmI CTGGAG 1 cut(s) 2322
BpuEI CTTGAG 4 cut(s) 829, 1045, 1793, 2411
BpuMI CCSGG 2 cut(s) 173, 2117
BsaAI YACGTR 1 cut(s) 2710
BsaBI GATNNNNATC 1 cut(s) 292
BsaJI CCNNGG 5 cut(s) 106, 875, 1405, 1627, 2116
BsaWI WCCGGW 1 cut(s) 1991
BsaXI ACNNNNNCTCC 3 cut(s) 30, 813, 843
Bse118I RCCGGY 1 cut(s) 428
Bse1I ACTGG 9 cut(s) 670, 868, 940, 1189, 1221, 1540, 1840, 2305, 2467
Bse3DI GCAATG 5 cut(s) 63, 820, 1100, 2230, 2352
Bse8I GATNNNNATC 1 cut(s) 292
BseAI TCCGGA 1 cut(s) 1991
BseDI CCNNGG 5 cut(s) 106, 875, 1405, 1627, 2116
BseJI GATNNNNATC 1 cut(s) 292
BseMI GCAATG 5 cut(s) 63, 820, 1100, 2230, 2352
BseMII CTCAG 2 cut(s) 1050, 2514
BseNI ACTGG 9 cut(s) 670, 868, 940, 1189, 1221, 1540, 1840, 2305, 2467
BseRI GAGGAG 2 cut(s) 360, 1481
BseXI GCAGC 3 cut(s) 249, 2557, 2902
BsgI GTGCAG 1 cut(s) 2556
Bsh1285I CGRYCG 1 cut(s) 2412
BshFI GGCC 4 cut(s) 381, 869, 1488, 2141
BshNI GGYRCC 2 cut(s) 431, 943
BsiEI CGRYCG 1 cut(s) 2412
BsiHKAI GWGCWC 1 cut(s) 2824
BsiHKCI CYCGRG 1 cut(s) 611
BsiSI CCGG 4 cut(s) 172, 429, 1992, 2116
BslFI GGGAC 1 cut(s) 1330
BsmAI GTCTC 5 cut(s) 94, 110, 1039, 1962, 1993
BsmBI CGTCTC 1 cut(s) 110
BsmFI GGGAC 1 cut(s) 1330
BsmI GAATGC 3 cut(s) 895, 1858, 2631
BsnI GGCC 4 cut(s) 381, 869, 1488, 2141
BsoBI CYCGRG 1 cut(s) 611
Bsp1286I GDGCHC 1 cut(s) 2824
Bsp13I TCCGGA 1 cut(s) 1991
Bsp1407I TGTACA 1 cut(s) 2052
BspACI CCGC 3 cut(s) 1008, 1738, 2220
BspANI GGCC 4 cut(s) 381, 869, 1488, 2141
BspCNI CTCAG 2 cut(s) 1049, 2513
BspEI TCCGGA 1 cut(s) 1991
BspLI GGNNCC 6 cut(s) 289, 433, 599, 868, 945, 1318
BspMAI CTGCAG 1 cut(s) 233
BspMI ACCTGC 2 cut(s) 236, 388
BspOI GCTAGC 1 cut(s) 140
BspPI GGATC 6 cut(s) 158, 282, 295, 574, 1443, 2563
BspT107I GGYRCC 2 cut(s) 431, 943
BspTI CTTAAG 1 cut(s) 322
BsrDI GCAATG 5 cut(s) 63, 820, 1100, 2230, 2352
BsrFI RCCGGY 1 cut(s) 428
BsrGI TGTACA 1 cut(s) 2052
BsrI ACTGG 9 cut(s) 670, 868, 940, 1189, 1221, 1540, 1840, 2305, 2467
BssAI RCCGGY 1 cut(s) 428
BssECI CCNNGG 5 cut(s) 106, 875, 1405, 1627, 2116
BssSI CACGAG 1 cut(s) 2512
BssT1I CCWWGG 2 cut(s) 875, 1405
Bst2BI CACGAG 1 cut(s) 2512
Bst4CI ACNGT 3 cut(s) 1153, 1431, 1767
Bst6I CTCTTC 2 cut(s) 2268, 2829
BstAFI CTTAAG 1 cut(s) 322
BstAPI GCANNNNNTGC 2 cut(s) 228, 394
BstAUI TGTACA 1 cut(s) 2052
BstBAI YACGTR 1 cut(s) 2710
BstC8I GCNNGC 2 cut(s) 138, 1928
BstDEI CTNAG 6 cut(s) 314, 640, 1036, 1453, 2127, 2500
BstEII GGTNACC 1 cut(s) 2453
BstENI CCTNNNNNAGG 1 cut(s) 591
BstH2I RGCGCY 1 cut(s) 2321
BstHHI GCGC 1 cut(s) 2320
BstMAI GTCTC 5 cut(s) 94, 110, 1039, 1962, 1993
BstMCI CGRYCG 1 cut(s) 2412
BstMWI GCNNNNNNNGC 6 cut(s) 137, 146, 228, 394, 1276, 2783
BstNSI RCATGY 7 cut(s) 214, 1603, 2110, 2202, 2471, 2680, 2874
BstPI GGTNACC 1 cut(s) 2453
BstSCI CCNGG 2 cut(s) 171, 2115
BstSFI CTRYAG 5 cut(s) 229, 1152, 1166, 1427, 2620
BstSNI TACGTA 1 cut(s) 2710
BstV1I GCAGC 3 cut(s) 249, 2557, 2902
BstV2I GAAGAC 2 cut(s) 788, 1901
BstX2I RGATCY 4 cut(s) 287, 579, 1435, 2187
BstXI CCANNNNNNTGG 1 cut(s) 1535
BstYI RGATCY 4 cut(s) 287, 579, 1435, 2187
BsuI GTATCC 1 cut(s) 2611
BsuRI GGCC 4 cut(s) 381, 869, 1488, 2141
BtgZI GCGATG 1 cut(s) 227
BtsI GCAGTG 2 cut(s) 131, 2772
BtsIMutI CAGTG 5 cut(s) 131, 861, 2667, 2689, 2772
BveI ACCTGC 2 cut(s) 236, 388
Cac8I GCNNGC 2 cut(s) 138, 1928
CaiI CAGNNNCTG 1 cut(s) 1874
CfoI GCGC 1 cut(s) 2320
Cfr10I RCCGGY 1 cut(s) 428
Cfr13I GGNCC 2 cut(s) 867, 1317
Csp6I GTAC 4 cut(s) 1594, 1829, 2053, 2208
CviQI GTAC 4 cut(s) 1594, 1829, 2053, 2208
DdeI CTNAG 6 cut(s) 314, 640, 1036, 1453, 2127, 2500
DraI TTTAAA 2 cut(s) 51, 2331
DrdI GACNNNNNNGTC 1 cut(s) 1324
DseDI GACNNNNNNGTC 1 cut(s) 1324
EaeI YGGCCR 2 cut(s) 379, 2139
Eam1104I CTCTTC 2 cut(s) 2268, 2829
EarI CTCTTC 2 cut(s) 2268, 2829
Eco105I TACGTA 1 cut(s) 2710
Eco130I CCWWGG 2 cut(s) 875, 1405
Eco47I GGWCC 1 cut(s) 1317
Eco57I CTGAAG 3 cut(s) 1851, 1998, 2808
Eco88I CYCGRG 1 cut(s) 611
Eco91I GGTNACC 1 cut(s) 2453
EcoNI CCTNNNNNAGG 1 cut(s) 591
EcoO65I GGTNACC 1 cut(s) 2453
EcoT14I CCWWGG 2 cut(s) 875, 1405
ErhI CCWWGG 2 cut(s) 875, 1405
Esp3I CGTCTC 1 cut(s) 110
FalI AAGNNNNNCTT 6 cut(s) 780, 812, 1849, 1881, 2049, 2081
FaqI GGGAC 1 cut(s) 1330
FauI CCCGC 1 cut(s) 1745
FauNDI CATATG 1 cut(s) 2608
FbaI TGATCA 2 cut(s) 1044, 2671
FblI GTMKAC 2 cut(s) 235, 1728
Fnu4HI GCNGC 4 cut(s) 263, 2221, 2571, 2916
Fsp4HI GCNGC 4 cut(s) 263, 2221, 2571, 2916
GlaI GCGC 1 cut(s) 2319
GluI GCNGC 4 cut(s) 263, 2221, 2571, 2916
GsuI CTGGAG 1 cut(s) 2322
HaeII RGCGCY 1 cut(s) 2321
HaeIII GGCC 4 cut(s) 381, 869, 1488, 2141
HapII CCGG 4 cut(s) 172, 429, 1992, 2116
HhaI GCGC 1 cut(s) 2320
Hin6I GCGC 1 cut(s) 2318
HinP1I GCGC 1 cut(s) 2318
HincII GTYRAC 3 cut(s) 236, 1353, 2718
HindII GTYRAC 3 cut(s) 236, 1353, 2718
HindIII AAGCTT 3 cut(s) 316, 536, 959
HpaI GTTAAC 1 cut(s) 1353
HpaII CCGG 4 cut(s) 172, 429, 1992, 2116
HphI GGTGA 4 cut(s) 217, 265, 1031, 2465
Hpy99I CGWCG 1 cut(s) 240
HpyCH4III ACNGT 3 cut(s) 1153, 1431, 1767
HpyCH4IV ACGT 2 cut(s) 843, 2709
HpyF10VI GCNNNNNNNGC 6 cut(s) 137, 146, 228, 394, 1276, 2783
HpyF3I CTNAG 6 cut(s) 314, 640, 1036, 1453, 2127, 2500
HpySE526I ACGT 2 cut(s) 843, 2709
HspAI GCGC 1 cut(s) 2318
Kpn2I TCCGGA 1 cut(s) 1991
Ksp22I TGATCA 2 cut(s) 1044, 2671
KspAI GTTAAC 1 cut(s) 1353
LmnI GCTCC 5 cut(s) 83, 1823, 1994, 2120, 2265
Lsp1109I GCAGC 3 cut(s) 249, 2557, 2902
MaeII ACGT 2 cut(s) 843, 2709
MaeIII GTNAC 9 cut(s) 175, 253, 1019, 1415, 1667, 2109, 2308, 2453, 2684
MfeI CAATTG 2 cut(s) 86, 454
MflI RGATCY 4 cut(s) 287, 579, 1435, 2187
MhlI GDGCHC 1 cut(s) 2824
MlsI TGGCCA 1 cut(s) 381
MluNI TGGCCA 1 cut(s) 381
MlyI GAGTC 4 cut(s) 96, 1677, 1946, 2839
MmeI TCCRAC 3 cut(s) 967, 1413, 2499
Mox20I TGGCCA 1 cut(s) 381
MroI TCCGGA 1 cut(s) 1991
MroXI GAANNNNTTC 1 cut(s) 198
MscI TGGCCA 1 cut(s) 381
Msp20I TGGCCA 1 cut(s) 381
MspCI CTTAAG 1 cut(s) 322
MspI CCGG 4 cut(s) 172, 429, 1992, 2116
MspR9I CCNGG 2 cut(s) 173, 2117
MunI CAATTG 2 cut(s) 86, 454
Mva1269I GAATGC 3 cut(s) 895, 1858, 2631
MwoI GCNNNNNNNGC 6 cut(s) 137, 146, 228, 394, 1276, 2783
NciI CCSGG 2 cut(s) 173, 2117
NdeI CATATG 1 cut(s) 2608
NheI GCTAGC 1 cut(s) 136
NlaIV GGNNCC 6 cut(s) 289, 433, 599, 868, 945, 1318
NmuCI GTSAC 6 cut(s) 175, 253, 1019, 1415, 2453, 2684
NspI RCATGY 7 cut(s) 214, 1603, 2110, 2202, 2471, 2680, 2874
PaeR7I CTCGAG 1 cut(s) 611
PaqCI CACCTGC 1 cut(s) 236
PciI ACATGT 4 cut(s) 1599, 2106, 2467, 2676
PctI GAATGC 3 cut(s) 895, 1858, 2631
PdmI GAANNNNTTC 1 cut(s) 198
PfeI GAWTC 8 cut(s) 406, 1195, 1570, 1717, 2061, 2695, 2750, 2882
PflMI CCANNNNNTGG 4 cut(s) 876, 1838, 2294, 2582
PkrI GCNGC 4 cut(s) 264, 2222, 2572, 2917
Ple19I CGATCG 1 cut(s) 2412
PleI GAGTC 4 cut(s) 96, 1677, 1945, 2839
PpsI GAGTC 4 cut(s) 96, 1677, 1945, 2839
Ppu21I YACGTR 1 cut(s) 2710
PscI ACATGT 4 cut(s) 1599, 2106, 2467, 2676
PshBI ATTAAT 1 cut(s) 549
PsiI TTATAA 1 cut(s) 741
Psp1406I AACGTT 1 cut(s) 843
PspEI GGTNACC 1 cut(s) 2453
PspN4I GGNNCC 6 cut(s) 289, 433, 599, 868, 945, 1318
PspPI GGNCC 2 cut(s) 867, 1317
PstI CTGCAG 1 cut(s) 233
PstNI CAGNNNCTG 1 cut(s) 1874
PsuI RGATCY 4 cut(s) 287, 579, 1435, 2187
PvuI CGATCG 1 cut(s) 2412
RsaI GTAC 4 cut(s) 1595, 1830, 2054, 2209
RsaNI GTAC 4 cut(s) 1594, 1829, 2053, 2208
SalI GTCGAC 1 cut(s) 234
SatI GCNGC 4 cut(s) 263, 2221, 2571, 2916
Sau96I GGNCC 2 cut(s) 867, 1317
ScaI AGTACT 1 cut(s) 2209
SchI GAGTC 4 cut(s) 96, 1677, 1946, 2839
ScrFI CCNGG 2 cut(s) 173, 2117
SduI GDGCHC 1 cut(s) 2824
SfcI CTRYAG 5 cut(s) 229, 1152, 1166, 1427, 2620
Sfr274I CTCGAG 1 cut(s) 611
SinI GGWCC 1 cut(s) 1317
SlaI CTCGAG 1 cut(s) 611
SmlI CTYRAG 6 cut(s) 322, 611, 808, 1024, 1772, 2426
SmoI CTYRAG 6 cut(s) 322, 611, 808, 1024, 1772, 2426
SnaBI TACGTA 1 cut(s) 2710
SpeI ACTAGT 1 cut(s) 2755
SsiI CCGC 3 cut(s) 1008, 1738, 2220
SspI AATATT 1 cut(s) 2164
StyD4I CCNGG 2 cut(s) 171, 2115
StyI CCWWGG 2 cut(s) 875, 1405
TaaI ACNGT 3 cut(s) 1153, 1431, 1767
TaiI ACGT 2 cut(s) 846, 2712
TaqI TCGA 8 cut(s) 235, 533, 612, 887, 1118, 1720, 1912, 2173
TatI WGTACW 2 cut(s) 2052, 2207
TauI GCSGC 1 cut(s) 2223
TfiI GAWTC 8 cut(s) 406, 1195, 1570, 1717, 2061, 2695, 2750, 2882
TscAI CASTG 5 cut(s) 138, 868, 2674, 2689, 2779
TseFI GTSAC 6 cut(s) 175, 253, 1019, 1415, 2453, 2684
TseI GCWGC 3 cut(s) 262, 2570, 2915
Tsp45I GTSAC 6 cut(s) 175, 253, 1019, 1415, 2453, 2684
TspGWI ACGGA 3 cut(s) 134, 467, 1314
TspRI CASTG 5 cut(s) 138, 868, 2674, 2689, 2779
Van91I CCANNNNNTGG 4 cut(s) 876, 1838, 2294, 2582
Vha464I CTTAAG 1 cut(s) 322
VpaK11BI GGWCC 1 cut(s) 1317
VspI ATTAAT 1 cut(s) 549
XagI CCTNNNNNAGG 1 cut(s) 591
XapI RAATTY 6 cut(s) 507, 783, 949, 1339, 2176, 2325
XceI RCATGY 7 cut(s) 214, 1603, 2110, 2202, 2471, 2680, 2874
XhoI CTCGAG 1 cut(s) 611
XmaJI CCTAGG 1 cut(s) 1405
XmiI GTMKAC 2 cut(s) 235, 1728
XmnI GAANNNNTTC 1 cut(s) 198
ZrmI AGTACT 1 cut(s) 2209
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.