MD00G1062600.v1.1
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Forward (+)
11550406 .. 11552651
2246 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1062600.v1.1.491

Sequence Viewer

Length: 2058 bp
ATGCGTGAATTTTGCAAAGGAGAAATTATTCGTCTAGCTACCACTCGATTCGCCACCAACTATATTGCATTAGACAGCATACTTAAGAAGAAAGCAGGGTTGAAGCAACTATTCACTAGTGACAATTGGCCCAACCACAATTTAAGCCGCTCAAATGCAGGTCGTATGGTGGAAAGTATAGTGCTTGATCATGCTTTTTGGACTCAATCAGAACATGTGTGCCAAATGTTTGAACCTCTTTACAAAGTTTTACGGATCGTTGACACAGAAGTGTATCCTACTATTAGCAATTGCACCAAATTAGAAGTTTTATCTGTCGGCCTCAATAATTTTGGAGGAGTGCTGCCTGAATCTATCAGCAATCTCTCAACAAAGCTCAGGAAAATAAATTTTCATGACAATCAAATACGCGGAAACATTCCCAACGGGGTTGGAAATCTCATCAACTTGGAGAGACTGGGCTTTTCAACAAATTTATTGGCAGGCACTATACCGAATTCAATAGGTAATGCTCCATCATCTCTAGGAAATCTCACTTCATTAAGCAATTTGTATCTCCAATCAAACCAGTTAAATGGAAGCATACCACAAAGTCTCGGAGACTGCAGGTTTATGATATATTTGGATCTTTCCCATAACAATCTTAGCGGTCCAATTCCAAAACAAGTAATCAATTTACCTATTTACTTGAATTTATCTGGAAACCAACTTACTGAATCTATTCCCATGGAAGTAGGCAACTTACAGCTTCTTGCTTTCTTGGATGTTTCTGAAAACAAGCTATCTGGTGAGATTCCACAAAGCTTAGGGAGTTGCACAAGTTTGACGACTCTGTCCCTGAGAGAAAATTTATTGCAGGGGACAATTCCTAAATCCTTGAGCTCTTTGAGAGGAATTGAAGATTTTGACCTCTCTCGCAACAACTTGTCTGGCATAATTCCTAACTACTTGGGGAGTTTCCCCTTCTTGCAGAATTTGAACCTTTCATTTAACGATTTTGAAGGTGCAGTACCAATCCAAGGAGTTTTTAAGAATGCAAGTGTGGTATCTGTTGTGGGAAACACACGGCTTTGTGGAGGTATACCTCACTTAAGATTGCCTAAATGCATCTCCAAGCAATCTAAGCGTGGGTTATCTCCTAAGCTGAACTTAATTATCTCAGTTTCTTGTGGGGTTGTCGGCGTGGTCTTGGTGTTGTTAGTTGCCCTTCTTTATCGATCAAGAAAGGCTAGAGAGCTTAAGTCAACTTCAGGATCATCACTGGGGGTTTCACTCTTGAAACTGTCCTATGGAGATCTCCTCAAAGCAACTGATGGGTTCTCTGCTTCGAATCTGATTGGTTTTGGAAGTTTCGGGTCCGTGTACAAGGGAGTTCTCAATCAGCATGAAGAAAGAAATGTTGCGATGAAAGTACTCAATCTTCAAACTTCAAGAGCTTCTAAAAGTTTCATATCTGAATGTGAAGCCTTGAAAAGCATTAGGCATCGAAATCTTGTCAAGCTGCTGACTGCTTGTTCAAGCATTGATTTTCAAGGAAACGATTTCAAAGCCCTGGTGTATGAGTTCATGGTGAATGGAAGCCTAGATGAGTCATTGCACATATCAGCTCAAGGAGTAGATAGGCCAGCCAATCTGCCAAAGAATCTGAATCTCACTCAAAGAGTTAACATTGCCATCGATGTAGCATGCGCTCTGGATTATTTGCATAACCACTCCCACATGCCAATAGTTCATTGTGATATAAAGCCCAACAACATTTTGTTAGACAGTGACATGACTGCTTGTGTTGGTGATTTTGGTTTAGCAAGGTACCTCCGGGATGCTTCTTGCCCATCTCCTTTGCACGATAGCAGTTCCAATGTCATAAAAGGCACCATAGGCTATACTCCCCCAGGCGAGCTGTCAACATATGGCGATGTGTATAGCTACGGAATACTGTTGTTGGAGATGTTAACTGGCAAGATGCCGACAGATGACATGTTTAAAGGTGGTATGGACCTGCACAATTTTGTTATAACGGCTCTACCAGACCACGAACATGTGGAAGAAATATATTAA

Protein Analysis

686

Amino Acids

74.89

Weight (kDa)

7.56

Isoelectric Point (pI)

34.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 229 - 332 5.9e-08 Leucine-rich repeat region
LRR_8 PF13855 274 - 333 8.1e-08 Leucine rich repeat
Pkinase PF00069 442 - 658 2.8e-35 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 443 - 660 5.1e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2015
AasI GACNNNNNNGTC 1 cut(s) 832
Acc36I ACCTGC 3 cut(s) 149, 597, 2007
Acc65I GGTACC 1 cut(s) 1809
AccB1I GGYRCC 2 cut(s) 1809, 1871
AccBSI CCGCTC 1 cut(s) 150
AccI GTMKAC 1 cut(s) 1081
AccII CGCG 1 cut(s) 411
AciI CCGC 3 cut(s) 148, 411, 648
AclWI GGATC 3 cut(s) 263, 633, 1261
AcsI RAATTY 7 cut(s) 8, 388, 472, 496, 691, 847, 973
AcuI CTGAAG 1 cut(s) 1233
AfaI GTAC 4 cut(s) 1011, 1364, 1413, 1811
AfiI CCNNNNNNNGG 1 cut(s) 1019
AflII CTTAAG 3 cut(s) 83, 1090, 1238
AflIII ACRYGT 3 cut(s) 214, 1977, 2038
AhlI ACTAGT 1 cut(s) 116
AjnI CCWGG 2 cut(s) 1551, 1891
AleI CACNNNNGTG 1 cut(s) 269
Alw21I GWGCWC 1 cut(s) 884
Alw26I GTCTC 3 cut(s) 448, 594, 599
AlwI GGATC 3 cut(s) 263, 633, 1261
AoxI GGCC 3 cut(s) 128, 319, 1622
ApeKI GCWGC 2 cut(s) 343, 1501
ApoI RAATTY 7 cut(s) 8, 388, 472, 496, 691, 847, 973
Asp700I GAANNNNTTC 2 cut(s) 27, 720
Asp718I GGTACC 1 cut(s) 1809
AspLEI GCGC 1 cut(s) 1691
AspS9I GGNCC 4 cut(s) 129, 650, 1356, 1996
AsuC2I CCSGG 1 cut(s) 1817
AsuHPI GGTGA 3 cut(s) 800, 1582, 1802
AsuII TTCGAA 1 cut(s) 1328
AvaII GGWCC 3 cut(s) 650, 1356, 1996
BanI GGYRCC 2 cut(s) 1809, 1871
BanII GRGCYC 1 cut(s) 884
BarI GAAGNNNNNNTAC 4 cut(s) 993, 1025, 1404, 1436
Bbv12I GWGCWC 1 cut(s) 884
BbvI GCAGC 2 cut(s) 330, 1488
BccI CCATC 4 cut(s) 523, 1307, 1682, 1840
BceAI ACGGC 2 cut(s) 1082, 2034
BciT130I CCWGG 2 cut(s) 1553, 1893
BciVI GTATCC 1 cut(s) 285
BclI TGATCA 1 cut(s) 187
BcnI CCSGG 1 cut(s) 1817
BcoDI GTCTC 3 cut(s) 448, 594, 599
BcuI ACTAGT 1 cut(s) 116
BfaI CTAG 5 cut(s) 35, 117, 524, 1230, 1583
BfmI CTRYAG 1 cut(s) 604
BfrI CTTAAG 3 cut(s) 83, 1090, 1238
BfuAI ACCTGC 3 cut(s) 149, 597, 2007
BfuI GTATCC 1 cut(s) 285
BglII AGATCT 1 cut(s) 1294
BisI GCNGC 3 cut(s) 148, 344, 1502
BlsI GCNGC 3 cut(s) 149, 345, 1503
BmcAI AGTACT 1 cut(s) 1413
Bme1390I CCNGG 3 cut(s) 1553, 1817, 1893
Bme18I GGWCC 3 cut(s) 650, 1356, 1996
BmgT120I GGNCC 4 cut(s) 129, 650, 1356, 1996
BmiI GGNNCC 3 cut(s) 1357, 1811, 1873
BmrFI CCNGG 3 cut(s) 1553, 1817, 1893
BmrI ACTGGG 2 cut(s) 467, 1271
BmsI GCATC 4 cut(s) 1116, 1492, 1810, 1953
BmuI ACTGGG 2 cut(s) 467, 1271
BplI GAGNNNNNCTC 2 cut(s) 1284, 1316
Bpu10I CCTNAGC 3 cut(s) 377, 805, 1140
Bpu14I TTCGAA 1 cut(s) 1328
BpuEI CTTGAG 2 cut(s) 898, 1593
BpuMI CCSGG 1 cut(s) 1817
Bsa29I ATCGAT 2 cut(s) 1216, 1677
BsaJI CCNNGG 4 cut(s) 726, 1018, 1551, 1891
Bsc4I CCNNNNNNNGG 1 cut(s) 1019
Bse1I ACTGG 4 cut(s) 462, 568, 1266, 1960
Bse3DI GCAATG 2 cut(s) 1592, 1668
BseBI CCWGG 2 cut(s) 1553, 1893
BseCI ATCGAT 2 cut(s) 1216, 1677
BseDI CCNNGG 4 cut(s) 726, 1018, 1551, 1891
BseGI GGATG 2 cut(s) 769, 1825
BseLI CCNNNNNNNGG 1 cut(s) 1019
BseMI GCAATG 2 cut(s) 1592, 1668
BseMII CTCAG 3 cut(s) 391, 830, 1173
BseNI ACTGG 4 cut(s) 462, 568, 1266, 1960
BseRI GAGGAG 2 cut(s) 351, 1289
BseXI GCAGC 2 cut(s) 330, 1488
BsgI GTGCAG 2 cut(s) 1026, 1985
Bsh1236I CGCG 1 cut(s) 411
BshFI GGCC 3 cut(s) 130, 321, 1624
BshNI GGYRCC 2 cut(s) 1809, 1871
BshVI ATCGAT 2 cut(s) 1216, 1677
BsiHKAI GWGCWC 1 cut(s) 884
BsiSI CCGG 1 cut(s) 1816
BslFI GGGAC 2 cut(s) 820, 874
BslI CCNNNNNNNGG 1 cut(s) 1019
BsmAI GTCTC 3 cut(s) 448, 594, 599
BsmFI GGGAC 2 cut(s) 820, 874
BsmI GAATGC 1 cut(s) 1039
BsnI GGCC 3 cut(s) 130, 321, 1624
Bsp119I TTCGAA 1 cut(s) 1328
Bsp1286I GDGCHC 1 cut(s) 884
Bsp1407I TGTACA 1 cut(s) 1362
Bsp143I GATC 6 cut(s) 187, 255, 625, 1217, 1253, 1294
Bsp19I CCATGG 1 cut(s) 726
BspACI CCGC 3 cut(s) 148, 411, 648
BspANI GGCC 3 cut(s) 130, 321, 1624
BspCNI CTCAG 3 cut(s) 390, 831, 1172
BspDI ATCGAT 2 cut(s) 1216, 1677
BspFNI CGCG 1 cut(s) 411
BspHI TCATGA 1 cut(s) 394
BspLI GGNNCC 3 cut(s) 1357, 1811, 1873
BspMAI CTGCAG 1 cut(s) 608
BspMI ACCTGC 3 cut(s) 149, 597, 2007
BspPI GGATC 3 cut(s) 263, 633, 1261
BspT104I TTCGAA 1 cut(s) 1328
BspT107I GGYRCC 2 cut(s) 1809, 1871
BspTI CTTAAG 3 cut(s) 83, 1090, 1238
BsrBI CCGCTC 1 cut(s) 150
BsrDI GCAATG 2 cut(s) 1592, 1668
BsrGI TGTACA 1 cut(s) 1362
BsrI ACTGG 4 cut(s) 462, 568, 1266, 1960
BssECI CCNNGG 4 cut(s) 726, 1018, 1551, 1891
BssMI GATC 6 cut(s) 187, 255, 625, 1217, 1253, 1294
BssNAI GTATAC 1 cut(s) 1082
BssT1I CCWWGG 2 cut(s) 726, 1018
Bst1107I GTATAC 1 cut(s) 1082
Bst2UI CCWGG 2 cut(s) 1553, 1893
Bst4CI ACNGT 3 cut(s) 1284, 1769, 1938
BstAFI CTTAAG 3 cut(s) 83, 1090, 1238
BstAUI TGTACA 1 cut(s) 1362
BstBI TTCGAA 1 cut(s) 1328
BstC8I GCNNGC 4 cut(s) 484, 1626, 1687, 1898
BstDEI CTNAG 7 cut(s) 377, 644, 805, 839, 1122, 1140, 1159
BstDSI CCRYGG 1 cut(s) 726
BstF5I GGATG 2 cut(s) 769, 1825
BstFNI CGCG 1 cut(s) 411
BstHHI GCGC 1 cut(s) 1691
BstKTI GATC 6 cut(s) 190, 258, 628, 1220, 1256, 1297
BstMAI GTCTC 3 cut(s) 448, 594, 599
BstMBI GATC 6 cut(s) 187, 255, 625, 1217, 1253, 1294
BstMWI GCNNNNNNNGC 2 cut(s) 1123, 1878
BstNI CCWGG 2 cut(s) 1553, 1893
BstNSI RCATGY 5 cut(s) 218, 1689, 1723, 1981, 2042
BstSCI CCNGG 3 cut(s) 1551, 1815, 1891
BstSFI CTRYAG 1 cut(s) 604
BstUI CGCG 1 cut(s) 411
BstV1I GCAGC 2 cut(s) 330, 1488
BstX2I RGATCY 2 cut(s) 625, 1294
BstXI CCANNNNNNTGG 1 cut(s) 575
BstYI RGATCY 2 cut(s) 625, 1294
BstZ17I GTATAC 1 cut(s) 1082
Bsu15I ATCGAT 2 cut(s) 1216, 1677
BsuI GTATCC 1 cut(s) 285
BsuRI GGCC 3 cut(s) 130, 321, 1624
BsuTUI ATCGAT 2 cut(s) 1216, 1677
BtgI CCRYGG 1 cut(s) 726
BtgZI GCGATG 2 cut(s) 1418, 1929
BtsCI GGATG 2 cut(s) 769, 1825
BtsIMutI CAGTG 2 cut(s) 1259, 1774
BveI ACCTGC 3 cut(s) 149, 597, 2007
Cac8I GCNNGC 4 cut(s) 484, 1626, 1687, 1898
CciI TCATGA 1 cut(s) 394
CfoI GCGC 1 cut(s) 1691
Cfr13I GGNCC 4 cut(s) 129, 650, 1356, 1996
ClaI ATCGAT 2 cut(s) 1216, 1677
Csp6I GTAC 4 cut(s) 1010, 1363, 1412, 1810
CviQI GTAC 4 cut(s) 1010, 1363, 1412, 1810
DdeI CTNAG 7 cut(s) 377, 644, 805, 839, 1122, 1140, 1159
DpnI GATC 6 cut(s) 189, 257, 627, 1219, 1255, 1296
DpnII GATC 6 cut(s) 187, 255, 625, 1217, 1253, 1294
DraI TTTAAA 1 cut(s) 1984
DrdI GACNNNNNNGTC 1 cut(s) 832
DseDI GACNNNNNNGTC 1 cut(s) 832
Ecl136II GAGCTC 1 cut(s) 882
Eco130I CCWWGG 2 cut(s) 726, 1018
Eco24I GRGCYC 1 cut(s) 884
Eco47I GGWCC 3 cut(s) 650, 1356, 1996
Eco53kI GAGCTC 1 cut(s) 882
Eco57I CTGAAG 1 cut(s) 1233
EcoICRI GAGCTC 1 cut(s) 882
EcoRI GAATTC 1 cut(s) 496
EcoRII CCWGG 2 cut(s) 1551, 1891
EcoT14I CCWWGG 2 cut(s) 726, 1018
EcoT22I ATGCAT 1 cut(s) 1109
EcoT38I GRGCYC 1 cut(s) 884
ErhI CCWWGG 2 cut(s) 726, 1018
FalI AAGNNNNNCTT 2 cut(s) 1133, 1165
FaqI GGGAC 2 cut(s) 820, 874
FauNDI CATATG 1 cut(s) 1909
FbaI TGATCA 1 cut(s) 187
FblI GTMKAC 1 cut(s) 1081
Fnu4HI GCNGC 3 cut(s) 148, 344, 1502
FokI GGATG 2 cut(s) 776, 1832
FriOI GRGCYC 1 cut(s) 884
Fsp4HI GCNGC 3 cut(s) 148, 344, 1502
FspBI CTAG 5 cut(s) 35, 117, 524, 1230, 1583
GlaI GCGC 1 cut(s) 1690
GluI GCNGC 3 cut(s) 148, 344, 1502
HaeIII GGCC 3 cut(s) 130, 321, 1624
HapII CCGG 1 cut(s) 1816
HhaI GCGC 1 cut(s) 1691
Hin6I GCGC 1 cut(s) 1689
HinP1I GCGC 1 cut(s) 1689
HincII GTYRAC 5 cut(s) 262, 1245, 1666, 1905, 1953
HindII GTYRAC 5 cut(s) 262, 1245, 1666, 1905, 1953
HindIII AAGCTT 1 cut(s) 802
HpaI GTTAAC 2 cut(s) 1666, 1953
HpaII CCGG 1 cut(s) 1816
HphI GGTGA 3 cut(s) 800, 1582, 1802
Hpy166II GTNNAC 7 cut(s) 262, 1082, 1245, 1363, 1666, 1905, 1953
Hpy188I TCNGA 6 cut(s) 211, 599, 772, 1335, 1456, 1647
Hpy188III TCNNGA 8 cut(s) 379, 395, 699, 1221, 1251, 1276, 1431, 1694
Hpy8I GTNNAC 7 cut(s) 262, 1082, 1245, 1363, 1666, 1905, 1953
HpyAV CCTTC 3 cut(s) 973, 995, 1217
HpyCH4III ACNGT 3 cut(s) 1284, 1769, 1938
HpyF10VI GCNNNNNNNGC 2 cut(s) 1123, 1878
HpyF3I CTNAG 7 cut(s) 377, 644, 805, 839, 1122, 1140, 1159
HspAI GCGC 1 cut(s) 1689
KpnI GGTACC 1 cut(s) 1813
Ksp22I TGATCA 1 cut(s) 187
KspAI GTTAAC 2 cut(s) 1666, 1953
Kzo9I GATC 6 cut(s) 187, 255, 625, 1217, 1253, 1294
LmnI GCTCC 1 cut(s) 517
Lsp1109I GCAGC 2 cut(s) 330, 1488
LweI GCATC 4 cut(s) 1116, 1492, 1810, 1953
MaeI CTAG 5 cut(s) 35, 117, 524, 1230, 1583
MaeIII GTNAC 2 cut(s) 119, 1769
MalI GATC 6 cut(s) 189, 257, 627, 1219, 1255, 1296
MbiI CCGCTC 1 cut(s) 150
MboI GATC 6 cut(s) 187, 255, 625, 1217, 1253, 1294
MboII GAAGA 5 cut(s) 100, 911, 1400, 1412, 2057
MfeI CAATTG 2 cut(s) 124, 289
MflI RGATCY 2 cut(s) 625, 1294
MhlI GDGCHC 1 cut(s) 884
MlyI GAGTC 3 cut(s) 196, 823, 1598
MmeI TCCRAC 2 cut(s) 412, 1923
MnlI CCTC 9 cut(s) 246, 329, 332, 884, 920, 1070, 1095, 1310, 1823
Mph1103I ATGCAT 1 cut(s) 1109
MroXI GAANNNNTTC 2 cut(s) 27, 720
MslI CAYNNNNRTG 2 cut(s) 269, 2037
MspCI CTTAAG 3 cut(s) 83, 1090, 1238
MspI CCGG 1 cut(s) 1816
MspR9I CCNGG 3 cut(s) 1553, 1817, 1893
MunI CAATTG 2 cut(s) 124, 289
Mva1269I GAATGC 1 cut(s) 1039
MvaI CCWGG 2 cut(s) 1553, 1893
MvnI CGCG 1 cut(s) 411
MwoI GCNNNNNNNGC 2 cut(s) 1123, 1878
NciI CCSGG 1 cut(s) 1817
NcoI CCATGG 1 cut(s) 726
NdeI CATATG 1 cut(s) 1909
NdeII GATC 6 cut(s) 187, 255, 625, 1217, 1253, 1294
NlaIV GGNNCC 3 cut(s) 1357, 1811, 1873
NmuCI GTSAC 2 cut(s) 119, 1769
NsiI ATGCAT 1 cut(s) 1109
NspI RCATGY 5 cut(s) 218, 1689, 1723, 1981, 2042
NspV TTCGAA 1 cut(s) 1328
OliI CACNNNNGTG 1 cut(s) 269
PaeI GCATGC 1 cut(s) 1689
PagI TCATGA 1 cut(s) 394
PciI ACATGT 3 cut(s) 214, 1977, 2038
PctI GAATGC 1 cut(s) 1039
PdmI GAANNNNTTC 2 cut(s) 27, 720
PfeI GAWTC 7 cut(s) 48, 350, 716, 793, 1330, 1642, 1648
PflFI GACNNNGTC 1 cut(s) 832
PfoI TCCNGGA 1 cut(s) 1815
PkrI GCNGC 3 cut(s) 149, 345, 1503
PleI GAGTC 3 cut(s) 196, 823, 1597
PpsI GAGTC 3 cut(s) 196, 823, 1597
PscI ACATGT 3 cut(s) 214, 1977, 2038
PsiI TTATAA 1 cut(s) 2015
Psp124BI GAGCTC 1 cut(s) 884
Psp6I CCWGG 2 cut(s) 1551, 1891
PspGI CCWGG 2 cut(s) 1551, 1891
PspN4I GGNNCC 3 cut(s) 1357, 1811, 1873
PspPI GGNCC 4 cut(s) 129, 650, 1356, 1996
PstI CTGCAG 1 cut(s) 608
PsuI RGATCY 2 cut(s) 625, 1294
PsyI GACNNNGTC 1 cut(s) 832
RsaI GTAC 4 cut(s) 1011, 1364, 1413, 1811
RsaNI GTAC 4 cut(s) 1010, 1363, 1412, 1810
RseI CAYNNNNRTG 2 cut(s) 269, 2037
SacI GAGCTC 1 cut(s) 884
SatI GCNGC 3 cut(s) 148, 344, 1502
Sau3AI GATC 6 cut(s) 187, 255, 625, 1217, 1253, 1294
Sau96I GGNCC 4 cut(s) 129, 650, 1356, 1996
ScaI AGTACT 1 cut(s) 1413
SchI GAGTC 3 cut(s) 196, 823, 1598
ScrFI CCNGG 3 cut(s) 1553, 1817, 1893
SduI GDGCHC 1 cut(s) 884
SfaNI GCATC 4 cut(s) 1116, 1492, 1810, 1953
SfcI CTRYAG 1 cut(s) 604
SfuI TTCGAA 1 cut(s) 1328
SinI GGWCC 3 cut(s) 650, 1356, 1996
SmiMI CAYNNNNRTG 2 cut(s) 269, 2037
SmlI CTYRAG 5 cut(s) 83, 877, 1090, 1238, 1608
SmoI CTYRAG 5 cut(s) 83, 877, 1090, 1238, 1608
SpeI ACTAGT 1 cut(s) 116
SphI GCATGC 1 cut(s) 1689
SsiI CCGC 3 cut(s) 148, 411, 648
SspMI CTAG 5 cut(s) 35, 117, 524, 1230, 1583
SstI GAGCTC 1 cut(s) 884
StyD4I CCNGG 3 cut(s) 1551, 1815, 1891
StyI CCWWGG 2 cut(s) 726, 1018
TaaI ACNGT 3 cut(s) 1284, 1769, 1938
TaqI TCGA 5 cut(s) 46, 1216, 1328, 1486, 1677
TatI WGTACW 2 cut(s) 1362, 1411
TauI GCSGC 1 cut(s) 150
TfiI GAWTC 7 cut(s) 48, 350, 716, 793, 1330, 1642, 1648
TscAI CASTG 2 cut(s) 1266, 1774
TseFI GTSAC 2 cut(s) 119, 1769
TseI GCWGC 2 cut(s) 343, 1501
Tsp45I GTSAC 2 cut(s) 119, 1769
TspDTI ATGAA 8 cut(s) 383, 528, 975, 1401, 1421, 1438, 1555, 1721
TspGWI ACGGA 3 cut(s) 268, 1348, 1944
TspRI CASTG 2 cut(s) 1266, 1774
Tth111I GACNNNGTC 1 cut(s) 832
Vha464I CTTAAG 3 cut(s) 83, 1090, 1238
VpaK11BI GGWCC 3 cut(s) 650, 1356, 1996
XapI RAATTY 7 cut(s) 8, 388, 472, 496, 691, 847, 973
XceI RCATGY 5 cut(s) 218, 1689, 1723, 1981, 2042
XmiI GTMKAC 1 cut(s) 1081
XmnI GAANNNNTTC 2 cut(s) 27, 720
XspI CTAG 5 cut(s) 35, 117, 524, 1230, 1583
ZrmI AGTACT 1 cut(s) 1413
Zsp2I ATGCAT 1 cut(s) 1109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.