MD07G1216600.v1.1
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
29414735 .. 29417918
3184 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1216600.v1.1.491

Sequence Viewer

Length: 3054 bp
ATGCAACCACTCTTTCTTCTCTTTCTTTTTAGCTCTGCCTCCTCCTCGCATTTAGCGGGAAATGAGGTGGATAGGCTTTCCCTGCTCGCCTTCAAAGCTGAAATCGTGACCGATACCCTGGGCATCCTTAGCTCTTGGAATGAATCCCTCCACTTCTGTCATTGGCCAGGCATTACTTGTGGCCGCAGACACCAGAGAGTTACAGTGCTCGACCTCCAATCAAGCGGGCTGGCAGGCCACCTATCTCCCCACATTGGAAACTTGAGCTTTTTGAGGGCTTTAAACCTCGCAAACAATAGCTTCAGCCACACCATCCCTCCAGAAATTGGTCGCTTGTTCCGTTTGGTAAGACTAGGCCTTCATAACAACTCCTTTGGTGGTCATATTCCATTCAACATATCACGTTGCTCTAACCTCCAACACATTGACTTATTTGGCAACACTCTTAGTGGCAAACTTCCAACTGAAATTGCCTCATTATCCAAGCTTCAGTTTCTTGGTTTAGGCAAGAACAATTTTTATGGGAAATTCCCACCTTCTTTTGGGAATCTTTCTTCTCTTGAAATACTATCTGCATCCCAAAATAATCTGCATGGAGGTATTCCAAATAGCCTTGGCCAGTTGAAAAGCTTAACTTTTTTTTCACTGTCTACAAATTATTTGAATGGTACCATCCCTCCCTCCATATACCACCTCTCGTCAATTAAAGTCATTTATATGCATCGAAACAACCTTCATGGAACTCTTCCTCCTGGCTTGGGCCACACTATATTTCCAAACCTCGAAATCTTTATTTTCCATACCAACCAGTTCACTGGACCAGTACCAGCTTCAATCTCCAATGCCTCAAACCTTTCACTATTTAGTATCTCACGCAATAAGTTTACTGGGAAAGTGCCTAATCTGGCACGCCTGCCAAATTTGTATTGGTTTGCACTTCATGTTAACAACCTTGGAAATAATGTGGAAGGTGACTTGGATTTCGTCTCTTCTCTAGTTAATTGCACCAATTTACAAATTTTATCTATCAGTGCCAATAATTTTGGAGGAGTGCTAACTGAATCTATTAGCAATCTCTCGACGAAGCTCAGGGGAATATATTTTGATGAGAATCAGATACACGGAAACATTCCTGTCAGGGTTGGAAATCTCATCAACTTGGAGACACTATACTTTAACGACAACCTTTTGACAGGCACTTTACCAAGTTCGATAGGCAAATTGAATAAGCTAGGAGATTTGGTTTTAAATTCTAATGATTTGGCAGGTGCCATCCCATCTTCCCTAGGAAATCTAACTTCATTAGGCAGATTCTTTCTCAACTCAAACCAGTTACAAGGCAGAATACCACAAAGTCTTGGAGAATGCAAGAATCTATTAGCTTTGAATCTTTCTCAAAATAATCTTAGTGGTCCAATTCCAAAACAAGTCATCGGTTTATTATCATTGCTATATTTGTTGGATCTATCCACCAATCAGCTTACTGGATCCATCCCCATGGAAGTAGGTAACATAGAGCATCTTGTTTCCTTGGATGTTTCTGAAAACAAGTTATCTGGAGAAATTCCACAAAGCTTAGGGAGTTGCACAAGTTTGTCGACTTTGTCTCTGAGAGAAAATTTATTGCAGGGGACAATTCCTAAATCCTTGAGCTCTTTGAGAGGAATTGAAGATTTTGACCTCTCTCGCAACAACTTGTCTGGCATAATTCCCAACTACTTGGAGAGTTTACCCTTCTTGCAGAATTTGAACCTTTCATTTAACGATTTTGAAGGTGCAGTACCAATCCAAGGAGTTTTTAAGAATACAAGTGCGGTAGCTGTTGTGGGAAACACACGGCTTTGTGGAGGTATACCTCACTTAAGATTGCCTAAATGCATCTCCAAGCAATCTAAGCGCGGGTTATCTCTTAAGCTGAACTTAATCATCTCAGTTTCTTGTGGGGTTGTCGGCTTGGTCTTGGCGTTGTTACTTGTGCTTCTTTATCGATCAAGAAAGGCTAGAGCGCTTAAGTCAAATTCAGGATCATCACTGGGGGTTTCACTCTTGAAACTGTCCTATGGAGATCTCCTCAAAGCAACTAATGGGTTCTCTGCTTCGAATCTGATTGGTGCTGGAAGTTTCGGGTCCGTGTACAAGGGAATTCTCAATCAGCTCGAAGAAAGAAATGTTGCTGTGAAAGTACTCAATCTTCAAACTTCAAGAGCTTCTAAAAGTTTCATATCTGAATGTGAAGCCTTGAAAAGCATTAGGCATCGAAATCTTGTCAAGCTACTGACTGCTTGTTCAAGCATTGATTTTCAAGGAAACGATTTCAAAGCCTTGGTGTATGAGTTCATGGTGAATAGAAGCCTAGATGAGTGGCTGCACATATCAGCTCAAGGAGTAGATAGGCCAGCCAATCTGCCGAAGAATCTGAATCTCACTCAAAGAGTTAACATTGCCATCGATGTAGCGTGTGCTCTAGATTATTTGCACAATGGCTCCCACGTGCCAATAGTTCATTGTGATATAAAGCCAAGCAACATTTTGTTAGACAGTGACATGACTGCTTGTGTTGGTGATTTCGGTTTAGCGAGGTACCTCCAGGATGCTTCTTGCCCATCTCCTTTGCACAATAGCAGTTTCAATGTCATAAAAGGCACCATAGGCTATACTCCACCAGGCGAGGTGTCAACATATGGCGACGTGTATAGCTACGGAATACTGTTGTTAGAGATGTTAACTGGCAAGAGGCCGACAGATGACATGTTTAAAGGTGGTATGGACCTGCACAATTTTGTTATGATGGCTCTACCAGAACGTGTGGGAGAAATATGTGATCCACTAATTGTTCAAATAGAAGAAAGCAGCAACAGTACTAATCCCAGAAGTAATAGGGGGAATCATGCCCCAAATGATCGAAGAAGAACGGTTGTGGAGTGCTTGACTGACATTGCAAGAGTAGGAGTTGCTTGTTCCGTAGCGATGCCAAGAGAGCGAAAAGACATGAGCAATGTGGTAGCTAAATTGAGTCTAATAAGGGATGTGCTAACTGGAACTAGGATGTCTTGA

Protein Analysis

1018

Amino Acids

110.52

Weight (kDa)

8.89

Isoelectric Point (pI)

40.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 24 - 60 2.1e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 80 - 317 4.9e-16 Leucine-rich repeat region
LRR_14 PF23598 327 - 465 2.9e-09 Leucine-rich repeat region
LRR_14 PF23598 451 - 589 2.3e-07 Leucine-rich repeat region
LRR_8 PF13855 531 - 590 1.1e-07 Leucine rich repeat
Pkinase PF00069 699 - 915 2.4e-34 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 700 - 917 2.8e-36 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1256
Acc36I ACCTGC 2 cut(s) 1256, 2778
Acc65I GGTACC 2 cut(s) 668, 2580
AccB1I GGYRCC 4 cut(s) 668, 1268, 2580, 2642
AccB7I CCANNNNNTGG 1 cut(s) 326
AccI GTMKAC 3 cut(s) 650, 1598, 1852
AccII CGCG 1 cut(s) 1899
AciI CCGC 5 cut(s) 56, 184, 225, 1814, 1899
AclWI GGATC 5 cut(s) 1470, 1482, 1495, 2032, 2816
AcoI YGGCCR 3 cut(s) 164, 181, 616
AcsI RAATTY 9 cut(s) 527, 919, 1017, 1249, 1563, 1618, 1744, 2017, 2142
AcuI CTGAAG 2 cut(s) 286, 473
AcvI CACGTG 1 cut(s) 2491
AfaI GTAC 7 cut(s) 670, 825, 1782, 2135, 2184, 2582, 2860
AfeI AGCGCT 1 cut(s) 2007
AfiI CCNNNNNNNGG 5 cut(s) 254, 326, 542, 758, 1790
AflII CTTAAG 3 cut(s) 1861, 1910, 2009
AflIII ACRYGT 3 cut(s) 2688, 2748, 2803
AjiI CACGTC 1 cut(s) 2689
AjnI CCWGG 5 cut(s) 117, 166, 751, 2586, 2662
AloI GAACNNNNNNTCC 2 cut(s) 733, 765
Alw21I GWGCWC 3 cut(s) 210, 1655, 2464
Alw26I GTCTC 3 cut(s) 991, 1157, 1611
AlwI GGATC 5 cut(s) 1470, 1482, 1495, 2032, 2816
Aor51HI AGCGCT 1 cut(s) 2007
AoxI GGCC 8 cut(s) 164, 181, 235, 355, 616, 760, 2393, 2735
ApeKI GCWGC 2 cut(s) 2365, 2850
ApoI RAATTY 9 cut(s) 527, 919, 1017, 1249, 1563, 1618, 1744, 2017, 2142
ArsI GACNNNNNNTTYG 2 cut(s) 965, 997
Asp718I GGTACC 2 cut(s) 668, 2580
AspA2I CCTAGG 1 cut(s) 1285
AspLEI GCGC 2 cut(s) 1899, 2008
AspS9I GGNCC 5 cut(s) 760, 818, 1412, 2127, 2767
AsuHPI GGTGA 3 cut(s) 983, 2353, 2573
AsuII TTCGAA 1 cut(s) 2099
AvaII GGWCC 4 cut(s) 818, 1412, 2127, 2767
AvrII CCTAGG 1 cut(s) 1285
BalI TGGCCA 2 cut(s) 166, 618
BamHI GGATCC 1 cut(s) 1487
BanI GGYRCC 4 cut(s) 668, 1268, 2580, 2642
BanII GRGCYC 1 cut(s) 1655
BarI GAAGNNNNNNTAC 4 cut(s) 1764, 1796, 2175, 2207
BbrPI CACGTG 1 cut(s) 2491
Bbv12I GWGCWC 3 cut(s) 210, 1655, 2464
BbvI GCAGC 2 cut(s) 2352, 2862
BccI CCATC 8 cut(s) 320, 680, 1280, 1285, 1499, 2453, 2611, 2782
BceAI ACGGC 1 cut(s) 1853
BciT130I CCWGG 5 cut(s) 119, 168, 753, 2588, 2664
BcoDI GTCTC 3 cut(s) 991, 1157, 1611
BfaI CTAG 8 cut(s) 353, 995, 1232, 1286, 2001, 2354, 2465, 3042
BfoI RGCGCY 1 cut(s) 2009
BfrI CTTAAG 3 cut(s) 1861, 1910, 2009
BfuAI ACCTGC 2 cut(s) 1256, 2778
BglII AGATCT 1 cut(s) 2065
BisI GCNGC 3 cut(s) 184, 2366, 2851
BlnI CCTAGG 1 cut(s) 1285
BlsI GCNGC 3 cut(s) 185, 2367, 2852
BmcAI AGTACT 2 cut(s) 2184, 2860
Bme1390I CCNGG 5 cut(s) 119, 168, 753, 2588, 2664
Bme18I GGWCC 4 cut(s) 818, 1412, 2127, 2767
BmgBI CACGTC 1 cut(s) 2689
BmgT120I GGNCC 5 cut(s) 760, 818, 1412, 2127, 2767
BmiI GGNNCC 7 cut(s) 670, 1270, 1489, 2128, 2485, 2582, 2644
BmrFI CCNGG 5 cut(s) 119, 168, 753, 2588, 2664
BmrI ACTGGG 2 cut(s) 897, 2042
BmsI GCATC 8 cut(s) 132, 584, 730, 1528, 1887, 2263, 2581, 2958
BmuI ACTGGG 2 cut(s) 897, 2042
BplI GAGNNNNNCTC 2 cut(s) 2055, 2087
BpmI CTGGAG 3 cut(s) 303, 1578, 2570
Bpu10I CCTNAGC 3 cut(s) 128, 1088, 1576
Bpu14I TTCGAA 1 cut(s) 2099
BpuEI CTTGAG 3 cut(s) 283, 1669, 2364
Bsa29I ATCGAT 2 cut(s) 1987, 2448
BsaAI YACGTR 1 cut(s) 2491
BsaBI GATNNNNATC 1 cut(s) 1110
BsaJI CCNNGG 9 cut(s) 117, 118, 613, 952, 1285, 1497, 1530, 1789, 2322
Bsc4I CCNNNNNNNGG 5 cut(s) 254, 326, 542, 758, 1790
Bse3DI GCAATG 4 cut(s) 1445, 2439, 2934, 3001
Bse8I GATNNNNATC 1 cut(s) 1110
BseBI CCWGG 5 cut(s) 119, 168, 753, 2588, 2664
BseCI ATCGAT 2 cut(s) 1987, 2448
BseDI CCNNGG 9 cut(s) 117, 118, 613, 952, 1285, 1497, 1530, 1789, 2322
BseJI GATNNNNATC 1 cut(s) 1110
BseLI CCNNNNNNNGG 5 cut(s) 254, 326, 542, 758, 1790
BseMI GCAATG 4 cut(s) 1445, 2439, 2934, 3001
BseMII CTCAG 3 cut(s) 1102, 1601, 1944
BseRI GAGGAG 4 cut(s) 31, 34, 1062, 2060
BseXI GCAGC 2 cut(s) 2352, 2862
BsgI GTGCAG 3 cut(s) 1797, 2351, 2756
Bsh1236I CGCG 1 cut(s) 1899
BshFI GGCC 8 cut(s) 166, 183, 237, 357, 618, 762, 2395, 2737
BshNI GGYRCC 4 cut(s) 668, 1268, 2580, 2642
BshVI ATCGAT 2 cut(s) 1987, 2448
BsiHKAI GWGCWC 3 cut(s) 210, 1655, 2464
BslFI GGGAC 1 cut(s) 1645
BslI CCNNNNNNNGG 5 cut(s) 254, 326, 542, 758, 1790
BsmAI GTCTC 3 cut(s) 991, 1157, 1611
BsmBI CGTCTC 1 cut(s) 991
BsmFI GGGAC 1 cut(s) 1645
BsmI GAATGC 1 cut(s) 1370
BsnI GGCC 8 cut(s) 166, 183, 237, 357, 618, 762, 2395, 2737
Bsp119I TTCGAA 1 cut(s) 2099
Bsp1286I GDGCHC 3 cut(s) 210, 1655, 2464
Bsp1407I TGTACA 1 cut(s) 2133
Bsp143I GATC 7 cut(s) 1462, 1487, 1988, 2024, 2065, 2821, 2899
Bsp19I CCATGG 1 cut(s) 1497
BspACI CCGC 5 cut(s) 56, 184, 225, 1814, 1899
BspANI GGCC 8 cut(s) 166, 183, 237, 357, 618, 762, 2395, 2737
BspCNI CTCAG 3 cut(s) 1101, 1602, 1943
BspDI ATCGAT 2 cut(s) 1987, 2448
BspFNI CGCG 1 cut(s) 1899
BspLI GGNNCC 7 cut(s) 670, 1270, 1489, 2128, 2485, 2582, 2644
BspMI ACCTGC 2 cut(s) 1256, 2778
BspPI GGATC 5 cut(s) 1470, 1482, 1495, 2032, 2816
BspT104I TTCGAA 1 cut(s) 2099
BspT107I GGYRCC 4 cut(s) 668, 1268, 2580, 2642
BspTI CTTAAG 3 cut(s) 1861, 1910, 2009
BsrDI GCAATG 4 cut(s) 1445, 2439, 2934, 3001
BsrGI TGTACA 1 cut(s) 2133
BssECI CCNNGG 9 cut(s) 117, 118, 613, 952, 1285, 1497, 1530, 1789, 2322
BssMI GATC 7 cut(s) 1462, 1487, 1988, 2024, 2065, 2821, 2899
BssNAI GTATAC 1 cut(s) 1853
BssT1I CCWWGG 7 cut(s) 613, 952, 1285, 1497, 1530, 1789, 2322
Bst1107I GTATAC 1 cut(s) 1853
Bst2UI CCWGG 5 cut(s) 119, 168, 753, 2588, 2664
Bst4CI ACNGT 7 cut(s) 205, 648, 2055, 2540, 2709, 2858, 2914
Bst6I CTCTTC 2 cut(s) 750, 994
BstAFI CTTAAG 3 cut(s) 1861, 1910, 2009
BstAUI TGTACA 1 cut(s) 2133
BstBAI YACGTR 1 cut(s) 2491
BstBI TTCGAA 1 cut(s) 2099
BstC8I GCNNGC 7 cut(s) 87, 227, 231, 235, 910, 914, 2397
BstDEI CTNAG 8 cut(s) 128, 446, 1088, 1406, 1576, 1610, 1893, 1930
BstDSI CCRYGG 1 cut(s) 1497
BstFNI CGCG 1 cut(s) 1899
BstH2I RGCGCY 1 cut(s) 2009
BstHHI GCGC 2 cut(s) 1899, 2008
BstKTI GATC 7 cut(s) 1465, 1490, 1991, 2027, 2068, 2824, 2902
BstMAI GTCTC 3 cut(s) 991, 1157, 1611
BstMBI GATC 7 cut(s) 1462, 1487, 1988, 2024, 2065, 2821, 2899
BstMWI GCNNNNNNNGC 6 cut(s) 82, 95, 129, 1894, 2649, 2977
BstNI CCWGG 5 cut(s) 119, 168, 753, 2588, 2664
BstNSI RCATGY 1 cut(s) 2752
BstSCI CCNGG 5 cut(s) 117, 166, 751, 2586, 2662
BstUI CGCG 1 cut(s) 1899
BstV1I GCAGC 2 cut(s) 2352, 2862
BstX2I RGATCY 3 cut(s) 1462, 1487, 2065
BstXI CCANNNNNNTGG 3 cut(s) 815, 1498, 1720
BstYI RGATCY 3 cut(s) 1462, 1487, 2065
BstZ17I GTATAC 1 cut(s) 1853
Bsu15I ATCGAT 2 cut(s) 1987, 2448
BsuRI GGCC 8 cut(s) 166, 183, 237, 357, 618, 762, 2395, 2737
BsuTUI ATCGAT 2 cut(s) 1987, 2448
BtgI CCRYGG 1 cut(s) 1497
BtgZI GCGATG 1 cut(s) 2981
BtrI CACGTC 1 cut(s) 2689
BtsIMutI CAGTG 6 cut(s) 210, 644, 813, 1036, 2030, 2545
BveI ACCTGC 2 cut(s) 1256, 2778
Cac8I GCNNGC 7 cut(s) 87, 227, 231, 235, 910, 914, 2397
CfoI GCGC 2 cut(s) 1899, 2008
Cfr13I GGNCC 5 cut(s) 760, 818, 1412, 2127, 2767
ClaI ATCGAT 2 cut(s) 1987, 2448
Csp6I GTAC 7 cut(s) 669, 824, 1781, 2134, 2183, 2581, 2859
CviAII CATG 9 cut(s) 593, 737, 941, 1498, 2338, 2545, 2749, 2888, 2989
CviQI GTAC 7 cut(s) 669, 824, 1781, 2134, 2183, 2581, 2859
DdeI CTNAG 8 cut(s) 128, 446, 1088, 1406, 1576, 1610, 1893, 1930
DpnI GATC 7 cut(s) 1464, 1489, 1990, 2026, 2067, 2823, 2901
DpnII GATC 7 cut(s) 1462, 1487, 1988, 2024, 2065, 2821, 2899
DraI TTTAAA 3 cut(s) 282, 1248, 2755
EaeI YGGCCR 3 cut(s) 164, 181, 616
Eam1104I CTCTTC 2 cut(s) 750, 994
EarI CTCTTC 2 cut(s) 750, 994
Ecl136II GAGCTC 1 cut(s) 1653
Eco130I CCWWGG 7 cut(s) 613, 952, 1285, 1497, 1530, 1789, 2322
Eco147I AGGCCT 1 cut(s) 357
Eco24I GRGCYC 1 cut(s) 1655
Eco47I GGWCC 4 cut(s) 818, 1412, 2127, 2767
Eco47III AGCGCT 1 cut(s) 2007
Eco53kI GAGCTC 1 cut(s) 1653
Eco57I CTGAAG 2 cut(s) 286, 473
Eco72I CACGTG 1 cut(s) 2491
EcoICRI GAGCTC 1 cut(s) 1653
EcoRI GAATTC 1 cut(s) 2142
EcoRII CCWGG 5 cut(s) 117, 166, 751, 2586, 2662
EcoT14I CCWWGG 7 cut(s) 613, 952, 1285, 1497, 1530, 1789, 2322
EcoT22I ATGCAT 2 cut(s) 723, 1880
EcoT38I GRGCYC 1 cut(s) 1655
ErhI CCWWGG 7 cut(s) 613, 952, 1285, 1497, 1530, 1789, 2322
Esp3I CGTCTC 1 cut(s) 991
FaeI CATG 9 cut(s) 596, 740, 944, 1501, 2341, 2548, 2752, 2891, 2992
FalI AAGNNNNNCTT 4 cut(s) 619, 651, 1904, 1936
FaqI GGGAC 1 cut(s) 1645
FatI CATG 9 cut(s) 592, 736, 940, 1497, 2337, 2544, 2748, 2887, 2988
FauI CCCGC 3 cut(s) 49, 218, 1892
FauNDI CATATG 1 cut(s) 2680
FblI GTMKAC 3 cut(s) 650, 1598, 1852
Fnu4HI GCNGC 3 cut(s) 184, 2366, 2851
FokI GGATG 9 cut(s) 110, 299, 562, 659, 1259, 1478, 1547, 2603, 3038
FriOI GRGCYC 1 cut(s) 1655
Fsp4HI GCNGC 3 cut(s) 184, 2366, 2851
FspBI CTAG 8 cut(s) 353, 995, 1232, 1286, 2001, 2354, 2465, 3042
GlaI GCGC 2 cut(s) 1898, 2007
GluI GCNGC 3 cut(s) 184, 2366, 2851
GsuI CTGGAG 3 cut(s) 303, 1578, 2570
HaeII RGCGCY 1 cut(s) 2009
HaeIII GGCC 8 cut(s) 166, 183, 237, 357, 618, 762, 2395, 2737
HhaI GCGC 2 cut(s) 1899, 2008
Hin1II CATG 9 cut(s) 596, 740, 944, 1501, 2341, 2548, 2752, 2891, 2992
Hin6I GCGC 2 cut(s) 1897, 2006
HinP1I GCGC 2 cut(s) 1897, 2006
HincII GTYRAC 5 cut(s) 946, 1599, 2437, 2676, 2724
HindII GTYRAC 5 cut(s) 946, 1599, 2437, 2676, 2724
HindIII AAGCTT 3 cut(s) 485, 628, 1573
HpaI GTTAAC 3 cut(s) 946, 2437, 2724
HphI GGTGA 3 cut(s) 983, 2353, 2573
Hpy188I TCNGA 6 cut(s) 1116, 1543, 1611, 2106, 2227, 2418
Hpy99I CGWCG 2 cut(s) 1084, 2690
HpyAV CCTTC 7 cut(s) 100, 368, 546, 743, 962, 1744, 1766
HpyCH4III ACNGT 7 cut(s) 205, 648, 2055, 2540, 2709, 2858, 2914
HpyCH4IV ACGT 4 cut(s) 403, 2490, 2688, 2803
HpyF10VI GCNNNNNNNGC 6 cut(s) 82, 95, 129, 1894, 2649, 2977
HpyF3I CTNAG 8 cut(s) 128, 446, 1088, 1406, 1576, 1610, 1893, 1930
HpySE526I ACGT 4 cut(s) 403, 2490, 2688, 2803
Hsp92II CATG 9 cut(s) 596, 740, 944, 1501, 2341, 2548, 2752, 2891, 2992
HspAI GCGC 2 cut(s) 1897, 2006
KpnI GGTACC 2 cut(s) 672, 2584
KspAI GTTAAC 3 cut(s) 946, 2437, 2724
Kzo9I GATC 7 cut(s) 1462, 1487, 1988, 2024, 2065, 2821, 2899
LmnI GCTCC 1 cut(s) 2489
Lsp1109I GCAGC 2 cut(s) 2352, 2862
LweI GCATC 8 cut(s) 132, 584, 730, 1528, 1887, 2263, 2581, 2958
MaeI CTAG 8 cut(s) 353, 995, 1232, 1286, 2001, 2354, 2465, 3042
MaeII ACGT 4 cut(s) 403, 2490, 2688, 2803
MaeIII GTNAC 7 cut(s) 106, 199, 971, 1332, 1508, 1968, 2540
MalI GATC 7 cut(s) 1464, 1489, 1990, 2026, 2067, 2823, 2901
MboI GATC 7 cut(s) 1462, 1487, 1988, 2024, 2065, 2821, 2899
MflI RGATCY 3 cut(s) 1462, 1487, 2065
MhlI GDGCHC 3 cut(s) 210, 1655, 2464
MlsI TGGCCA 2 cut(s) 166, 618
MluNI TGGCCA 2 cut(s) 166, 618
MlyI GAGTC 1 cut(s) 3022
MmeI TCCRAC 4 cut(s) 442, 485, 1123, 1440
Mox20I TGGCCA 2 cut(s) 166, 618
Mph1103I ATGCAT 2 cut(s) 723, 1880
MscI TGGCCA 2 cut(s) 166, 618
MslI CAYNNNNRTG 2 cut(s) 716, 1496
Msp20I TGGCCA 2 cut(s) 166, 618
MspCI CTTAAG 3 cut(s) 1861, 1910, 2009
MspR9I CCNGG 5 cut(s) 119, 168, 753, 2588, 2664
Mva1269I GAATGC 1 cut(s) 1370
MvaI CCWGG 5 cut(s) 119, 168, 753, 2588, 2664
MvnI CGCG 1 cut(s) 1899
MwoI GCNNNNNNNGC 6 cut(s) 82, 95, 129, 1894, 2649, 2977
NcoI CCATGG 1 cut(s) 1497
NdeI CATATG 1 cut(s) 2680
NdeII GATC 7 cut(s) 1462, 1487, 1988, 2024, 2065, 2821, 2899
NlaIII CATG 9 cut(s) 596, 740, 944, 1501, 2341, 2548, 2752, 2891, 2992
NlaIV GGNNCC 7 cut(s) 670, 1270, 1489, 2128, 2485, 2582, 2644
NmuCI GTSAC 3 cut(s) 106, 971, 2540
NsiI ATGCAT 2 cut(s) 723, 1880
NspI RCATGY 1 cut(s) 2752
NspV TTCGAA 1 cut(s) 2099
PaqCI CACCTGC 1 cut(s) 1256
PasI CCCWGGG 1 cut(s) 118
PceI AGGCCT 1 cut(s) 357
PciI ACATGT 1 cut(s) 2748
PcsI WCGNNNNNNNCGW 1 cut(s) 337
PctI GAATGC 1 cut(s) 1370
PflFI GACNNNGTC 1 cut(s) 1603
PflMI CCANNNNNTGG 1 cut(s) 326
PfoI TCCNGGA 1 cut(s) 2586
PkrI GCNGC 3 cut(s) 185, 2367, 2852
PleI GAGTC 1 cut(s) 3021
PmaCI CACGTG 1 cut(s) 2491
PmlI CACGTG 1 cut(s) 2491
PpsI GAGTC 1 cut(s) 3021
Ppu21I YACGTR 1 cut(s) 2491
PscI ACATGT 1 cut(s) 2748
Psp124BI GAGCTC 1 cut(s) 1655
Psp6I CCWGG 5 cut(s) 117, 166, 751, 2586, 2662
PspCI CACGTG 1 cut(s) 2491
PspGI CCWGG 5 cut(s) 117, 166, 751, 2586, 2662
PspN4I GGNNCC 7 cut(s) 670, 1270, 1489, 2128, 2485, 2582, 2644
PspPI GGNCC 5 cut(s) 760, 818, 1412, 2127, 2767
PsuI RGATCY 3 cut(s) 1462, 1487, 2065
PsyI GACNNNGTC 1 cut(s) 1603
RsaI GTAC 7 cut(s) 670, 825, 1782, 2135, 2184, 2582, 2860
RsaNI GTAC 7 cut(s) 669, 824, 1781, 2134, 2183, 2581, 2859
RseI CAYNNNNRTG 2 cut(s) 716, 1496
SacI GAGCTC 1 cut(s) 1655
SalI GTCGAC 1 cut(s) 1597
SatI GCNGC 3 cut(s) 184, 2366, 2851
Sau3AI GATC 7 cut(s) 1462, 1487, 1988, 2024, 2065, 2821, 2899
Sau96I GGNCC 5 cut(s) 760, 818, 1412, 2127, 2767
ScaI AGTACT 2 cut(s) 2184, 2860
SchI GAGTC 1 cut(s) 3022
ScrFI CCNGG 5 cut(s) 119, 168, 753, 2588, 2664
SduI GDGCHC 3 cut(s) 210, 1655, 2464
SfaNI GCATC 8 cut(s) 132, 584, 730, 1528, 1887, 2263, 2581, 2958
SfuI TTCGAA 1 cut(s) 2099
SinI GGWCC 4 cut(s) 818, 1412, 2127, 2767
SmiMI CAYNNNNRTG 2 cut(s) 716, 1496
SmlI CTYRAG 6 cut(s) 262, 1648, 1861, 1910, 2009, 2379
SmoI CTYRAG 6 cut(s) 262, 1648, 1861, 1910, 2009, 2379
SseBI AGGCCT 1 cut(s) 357
SsiI CCGC 5 cut(s) 56, 184, 225, 1814, 1899
SspMI CTAG 8 cut(s) 353, 995, 1232, 1286, 2001, 2354, 2465, 3042
SstI GAGCTC 1 cut(s) 1655
StuI AGGCCT 1 cut(s) 357
StyD4I CCNGG 5 cut(s) 117, 166, 751, 2586, 2662
StyI CCWWGG 7 cut(s) 613, 952, 1285, 1497, 1530, 1789, 2322
TaaI ACNGT 7 cut(s) 205, 648, 2055, 2540, 2709, 2858, 2914
TaiI ACGT 4 cut(s) 406, 2493, 2691, 2806
TaqII GACCGA 1 cut(s) 125
TatI WGTACW 3 cut(s) 2133, 2182, 2858
TauI GCSGC 1 cut(s) 186
TscAI CASTG 6 cut(s) 210, 651, 820, 1036, 2037, 2545
TseFI GTSAC 3 cut(s) 106, 971, 2540
TseI GCWGC 2 cut(s) 2365, 2850
Tsp45I GTSAC 3 cut(s) 106, 971, 2540
TspDTI ATGAA 9 cut(s) 156, 350, 725, 929, 1290, 1746, 2209, 2326, 2492
TspGWI ACGGA 5 cut(s) 329, 1137, 2119, 2715, 2950
TspRI CASTG 6 cut(s) 210, 651, 820, 1036, 2037, 2545
Tth111I GACNNNGTC 1 cut(s) 1603
Van91I CCANNNNNTGG 1 cut(s) 326
Vha464I CTTAAG 3 cut(s) 1861, 1910, 2009
VpaK11BI GGWCC 4 cut(s) 818, 1412, 2127, 2767
XapI RAATTY 9 cut(s) 527, 919, 1017, 1249, 1563, 1618, 1744, 2017, 2142
XbaI TCTAGA 1 cut(s) 2464
XceI RCATGY 1 cut(s) 2752
XcmI CCANNNNNNNNNTGG 1 cut(s) 924
XmaJI CCTAGG 1 cut(s) 1285
XmiI GTMKAC 3 cut(s) 650, 1598, 1852
XspI CTAG 8 cut(s) 353, 995, 1232, 1286, 2001, 2354, 2465, 3042
ZrmI AGTACT 2 cut(s) 2184, 2860
Zsp2I ATGCAT 2 cut(s) 723, 1880
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.