MD00G1013800.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Reverse (-)
1724008 .. 1727464
3457 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1013800.v1.1.491

Sequence Viewer

Length: 3096 bp
ATGATAAGGACTTTTCCCTTCTCATGTTTGAATTTTCAAGAACCAGAAACTGTGGTTGCAGTGTTCGTTTGCTGTTGGAGCTCCCTGCAATCGGGACTCGGAGGGAATGCGACGGATAGGCTGGCGCTGCTTGCCATCAAAGCTCAAATAAAGCAAGATCTCCATAATTACAATGTGATGAGCTCCTGGAACGAATCCATGCACTTTTGCATGTGGCATGGTGTGACGTGCAGTCGACGACATCGCCAAAGGGTCACTACCCTGGACCTTCAATCTCAAAATCTGGTAGGGAAACTATCCCCAAACATTGGAAATCTAAGTTTTCTAAGGGAGCTGTGGCTGCTAAACAACAGCTTCAGTGGGGAAATTCCTCCACAAATTGGGAATTTGCGTAGATTGCAAGTATTGCGATTAGGCGGTAACTCGTTTAGTGGCAGTATTCCACGCAATATATCATATTGCTTCAACCTTATCCATGTGGCTTTCACTCGCAACATGTTGGTGGGTAAAATTCCTTCAGAAATTGGATTGCTGTCGAAGCTGCAACATTTTTCATTAAATTATAATAATCTAACGGGACAGGTCCCTCCTTCCTTAGGGAACCTTTCGTCTCTCCAGAGACTAACTCTTTTTGGTAACAACTTGATGGGAAACATCCCCAGTTCTCTTGGCCAATTGAAAAAATTAACCTTCTTGGGATTGGGCATAAATCAGTTGTCTGGTAGCATTCCTTCCTCCATTTATAACCTCTCTTCTCTTGTTATATTTTCCATACTAATTAACCAAATTGAAGGGAGCATTCCATCAGATATTGGCAAAAGTCTTCCTAATCTCGAAATCTTCAACTTCAACTCAAACCAACTCACTGGGTCCATACCTCCCTCAATATTCAATGTCACAAGTGTTTGGTTATTGGCTGTTGGGAATAACAACCTAATCGGACGGGTACCGAATCTCCAAAAGCTTCACAACCTCCTGCATGTCAACATTCAACATAATAATATTGGAAGCGGTAAAGAAGGTGACTTAAGTTTTCTCTCGGACTTGACCAATGCCACCCAGTTACAATCGTTGTGCATTGACGATAACAATTTTGGAGGGACATTGCCCATGTCAATATCCAATCTCTCAACCAAACTTGAATTGTTTTGGGGTGGCAATAACCAAATATATGGAAGTATCCCATCTGGGATAGGGAATCTGGTGAGCTTGGAAGGGTTGTATTTGGGGAATAATAGCTTCACAGGTAACATCCCCTCTGACATGGGTAAGCTTTCAAACCTTGGAAGATTAGAAATTTTCATGAACAAATTATCAGGAAATATTCCGTCTTCCTTAATAAATTTAACCAAGTTATACCATCTTAGGTTGGATAGAAATCATCTTGAGGGCAGCATTCCTTCACGTCTGGGGGAATGCCATGGGTTGCAATTGTTGAATCTTTCTTATAACCTTCTTAATGGCACAATACCCAAACAAGTTTTTAGACTCTCCTCCTTATCAATTTATTTGGACTTGTCTAATAACCTCTTCACAGGTTCCCTTCCCTCGGAGGTTGGGAATTTACAAAGTCTAAGTGAATTGGACGTTTCTGATAACATGTTATCTGGAGAACTCCCCAGTAGCCTTGGTGGTTGTGAGAGTTTAGAAGTCCTGCATTTGCAAGGAAACTTCTTCAATGGATCCATTCCTTTGTCTATGAGTTCAGTGAGAGGGATTCAAGATCTAGACCTTTCTCGCAATAATTTTTTAGATGAAATTCCGCATTTTTTAGAAGGCTTTAGACTCCTGAATAATCTGAACTTATCCTTCAATCAATTTTGGGGAGTGGTACCAACTGGAGGTGTTTTCAAAAATGCGAGTGCTATTTCAGTTGTTGGCAACGCTAATCTGTGCAGCCTTGTTGCTAATTTAAAGCTTCCCAAGTGCAAATCTAAAGAGACCAAGAAACGAAGATTGTCTCGTCACTTGAAACTAATACTCCCTTTAGTATTTGGACTTACTCTTCTAGGAATAGCCATTGTGTTCTCCTATTTCTTTCTTTGTTCGTCAAGGAAGAAAAGGAAAGAAATTTCATTGAGCACTTTGGGGAACACTATTTTGCAAGTGTCATATGCTACTCTACTCAAAGCTACTGACGGGTTCTCAGTGGCTAATTTAATTGGTGCTGGTAGTTTTGGGTCTGTGTACAAAGGAGTTCTTGATGAGGATGATAAAGCTCAACTTGTTGCCGTGAAGGTGTTTAACTTGTTACGCCATGGAGCTTCGAGGAGTTTCATAGCCGAATGTGAAGCTTTGAGAAATATTAGGCACCGAAATCTCGTCAAGATTATAACCGTGTGTTCAAGTGTTGATTTTCATGGTAATGATTTCAAGGCTCTAGTTTATGAGTACATGGACAATGGGAGCTTAGAGGAGTGGCTGCATCCACCTAATGGAACTGAAGAGTTAAGAGATCATGTACCCAAGAAGGTAAGTCTTCTACAGAGGCTAGAAATTGCCATTGGTGTTGCTTGTGCACTGGATTATCTTCATAATCATTGTGAAACGCCTATAGTTCATTGTGATCTCAAGCCAAGCAACGTTCTCTTGGACAACGAATTGACTGGCCATGTTTCTGACTTTGGATTAGCAAGGTTTCTCTCACAAGTAATGAGTAATGTTTCAGCAATTCAGAGTCAGACAAGTTCCGTTGGAATAAGAGGAACGGTTGGTTATGCAGCTCCAGAGTATGGCATTGGGAGTGAGGTGTCAACGAGTGGTGATGTCTACAGCTTTGGCATTCTCTTGTTGGAGATGTTTACAGGGAAGAGACCCACTGACAACATGTTTGGTGATAGTTTGAACCTTCATAATTTTGTCAAGATGTCTCTCCCCGGGCGAGTTACTGAGATTGCAGACGCACCACTTCTTCAAGGAGGCACGAACGAGAATCCCAATCAACGCCGTGCGAGAATTCATAAAGTTGGGGTGTGCTTGAGTTCAATATTTACAATTGGAATTGCTTGTTCAGCTGAAGCCGCAACAGATCGACCAAAGAATATCAATGATGCTGCATGTGAACTTCATTCCATTAGGAATATTTTTCTTGGATAG

Protein Analysis

1032

Amino Acids

112.79

Weight (kDa)

8.46

Isoelectric Point (pI)

43.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 37 - 78 2e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 88 - 186 2.7e-07 Leucine-rich repeat region
LRR_14 PF23598 174 - 257 1.1e-06 Leucine-rich repeat region
LRR_14 PF23598 354 - 460 3.5e-07 Leucine-rich repeat region
LRR_14 PF23598 397 - 482 2.9e-06 Leucine-rich repeat region
LRR_14 PF23598 470 - 600 4.9e-08 Leucine-rich repeat region
Pkinase PF00069 716 - 955 1.4e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 718 - 944 3e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 564, 744, 1449, 2333
Acc65I GGTACC 2 cut(s) 946, 1831
AccB1I GGYRCC 3 cut(s) 946, 1831, 2310
AccB7I CCANNNNNTGG 4 cut(s) 308, 380, 2435, 2732
AccI GTMKAC 2 cut(s) 235, 2769
AciI CCGC 4 cut(s) 417, 1011, 1763, 3021
AclI AACGTT 1 cut(s) 2583
AclWI GGATC 2 cut(s) 1677, 1690
AcoI YGGCCR 2 cut(s) 670, 2608
AcuI CTGAAG 4 cut(s) 340, 501, 2463, 3036
AfaI GTAC 5 cut(s) 948, 1833, 2189, 2393, 2463
AfiI CCNNNNNNNGG 8 cut(s) 91, 308, 380, 596, 1549, 1841, 2435, 2732
AflII CTTAAG 1 cut(s) 1027
AflIII ACRYGT 3 cut(s) 495, 1599, 2826
AhdI GACNNNNNGTC 1 cut(s) 231
AjiI CACGTC 2 cut(s) 228, 1406
AjnI CCWGG 2 cut(s) 185, 261
AjuI GAANNNNNNNTTGG 2 cut(s) 2487, 2519
Alw21I GWGCWC 4 cut(s) 83, 185, 2084, 2521
Alw26I GTCTC 6 cut(s) 613, 615, 1934, 1965, 2806, 2874
Alw44I GTGCAC 1 cut(s) 2517
AlwI GGATC 2 cut(s) 1677, 1690
AlwNI CAGNNNCTG 1 cut(s) 50
Ama87I CYCGRG 1 cut(s) 2876
AoxI GGCC 2 cut(s) 670, 2608
ApaLI GTGCAC 1 cut(s) 2517
ApeKI GCWGC 8 cut(s) 127, 340, 541, 1392, 1896, 2422, 2720, 3053
ArsI GACNNNNNNTTYG 2 cut(s) 2813, 2845
Asp718I GGTACC 2 cut(s) 946, 1831
AspLEI GCGC 1 cut(s) 127
AspS9I GGNCC 3 cut(s) 265, 583, 870
AsuC2I CCSGG 2 cut(s) 2877, 2878
AsuHPI GGTGA 4 cut(s) 1034, 1216, 2774, 2846
AvaI CYCGRG 1 cut(s) 2876
AvaII GGWCC 3 cut(s) 265, 583, 870
AxyI CCTNAGG 1 cut(s) 595
BaeGI GKGCMC 1 cut(s) 2521
BalI TGGCCA 2 cut(s) 672, 2610
BamHI GGATCC 1 cut(s) 1682
BanI GGYRCC 3 cut(s) 946, 1831, 2310
BanII GRGCYC 2 cut(s) 83, 185
BarI GAAGNNNNNNTAC 4 cut(s) 499, 531, 715, 747
BbsI GAAGAC 3 cut(s) 815, 1323, 2471
Bbv12I GWGCWC 4 cut(s) 83, 185, 2084, 2521
BbvI GCAGC 8 cut(s) 114, 327, 528, 1404, 1908, 2409, 2732, 3040
BccI CCATC 5 cut(s) 143, 640, 811, 1192, 1368
BceAI ACGGC 2 cut(s) 2216, 2931
BciT130I CCWGG 2 cut(s) 187, 263
BciVI GTATCC 1 cut(s) 1190
BcnI CCSGG 2 cut(s) 2877, 2878
BcoDI GTCTC 6 cut(s) 613, 615, 1934, 1965, 2806, 2874
BfaI CTAG 4 cut(s) 1727, 2009, 2381, 2492
BfmI CTRYAG 3 cut(s) 2483, 2553, 2770
BfoI RGCGCY 1 cut(s) 128
BfrI CTTAAG 1 cut(s) 1027
BfuI GTATCC 1 cut(s) 1190
BglII AGATCT 2 cut(s) 157, 1723
BisI GCNGC 9 cut(s) 128, 341, 542, 1393, 1897, 2423, 2721, 3021, 3054
BlsI GCNGC 9 cut(s) 129, 342, 543, 1394, 1898, 2424, 2722, 3022, 3055
Bme1390I CCNGG 4 cut(s) 187, 263, 2877, 2878
Bme18I GGWCC 3 cut(s) 265, 583, 870
BmeRI GACNNNNNGTC 1 cut(s) 231
BmeT110I CYCGRG 1 cut(s) 2876
BmgBI CACGTC 2 cut(s) 228, 1406
BmgT120I GGNCC 3 cut(s) 265, 583, 870
BmiI GGNNCC 8 cut(s) 585, 602, 871, 948, 1540, 1684, 1833, 2312
BmrFI CCNGG 4 cut(s) 187, 263, 2877, 2878
BmrI ACTGGG 4 cut(s) 654, 876, 1054, 1614
BmsI GCATC 2 cut(s) 2434, 3040
BmuI ACTGGG 4 cut(s) 654, 876, 1054, 1614
BpiI GAAGAC 3 cut(s) 815, 1323, 2471
BplI GAGNNNNNCTC 2 cut(s) 610, 642
BpmI CTGGAG 4 cut(s) 599, 1629, 1860, 2709
BpuEI CTTGAG 3 cut(s) 1406, 2555, 2998
BpuMI CCSGG 2 cut(s) 2877, 2878
BsaBI GATNNNNATC 1 cut(s) 1377
BsaI GGTCTC 2 cut(s) 1934, 2806
BsaJI CCNNGG 8 cut(s) 261, 1282, 1420, 1548, 1627, 2257, 2875, 2876
BsaXI ACNNNNNCTCC 4 cut(s) 939, 969, 1965, 1995
Bsc4I CCNNNNNNNGG 8 cut(s) 91, 308, 380, 596, 1549, 1841, 2435, 2732
Bse1I ACTGG 7 cut(s) 660, 871, 1060, 1620, 1843, 2526, 2611
Bse21I CCTNAGG 1 cut(s) 595
Bse3DI GCAATG 1 cut(s) 1103
Bse8I GATNNNNATC 1 cut(s) 1377
BseBI CCWGG 2 cut(s) 187, 263
BseDI CCNNGG 8 cut(s) 261, 1282, 1420, 1548, 1627, 2257, 2875, 2876
BseGI GGATG 4 cut(s) 654, 1251, 2215, 2425
BseJI GATNNNNATC 1 cut(s) 1377
BseLI CCNNNNNNNGG 8 cut(s) 91, 308, 380, 596, 1549, 1841, 2435, 2732
BseMI GCAATG 1 cut(s) 1103
BseMII CTCAG 2 cut(s) 2160, 2880
BseNI ACTGG 7 cut(s) 660, 871, 1060, 1620, 1843, 2526, 2611
BseRI GAGGAG 3 cut(s) 1483, 2284, 2429
BseSI GKGCMC 1 cut(s) 2521
BseXI GCAGC 8 cut(s) 114, 327, 528, 1404, 1908, 2409, 2732, 3040
BsgI GTGCAG 2 cut(s) 250, 1915
BshFI GGCC 2 cut(s) 672, 2610
BshNI GGYRCC 3 cut(s) 946, 1831, 2310
BsiHKAI GWGCWC 4 cut(s) 83, 185, 2084, 2521
BsiHKCI CYCGRG 1 cut(s) 2876
BsiSI CCGG 1 cut(s) 2877
BslFI GGGAC 4 cut(s) 108, 569, 591, 1114
BslI CCNNNNNNNGG 8 cut(s) 91, 308, 380, 596, 1549, 1841, 2435, 2732
BsmAI GTCTC 6 cut(s) 613, 615, 1934, 1965, 2806, 2874
BsmBI CGTCTC 1 cut(s) 615
BsmFI GGGAC 4 cut(s) 108, 569, 591, 1114
BsmI GAATGC 6 cut(s) 112, 726, 798, 1395, 1421, 2781
BsnI GGCC 2 cut(s) 672, 2610
Bso31I GGTCTC 2 cut(s) 1934, 2806
BsoBI CYCGRG 1 cut(s) 2876
Bsp1286I GDGCHC 4 cut(s) 83, 185, 2084, 2521
Bsp1407I TGTACA 1 cut(s) 2187
Bsp143I GATC 6 cut(s) 157, 1682, 1723, 2455, 2566, 3028
Bsp19I CCATGG 2 cut(s) 1420, 2257
BspACI CCGC 4 cut(s) 417, 1011, 1763, 3021
BspANI GGCC 2 cut(s) 672, 2610
BspCNI CTCAG 2 cut(s) 2159, 2881
BspHI TCATGA 1 cut(s) 1302
BspLI GGNNCC 8 cut(s) 585, 602, 871, 948, 1540, 1684, 1833, 2312
BspPI GGATC 2 cut(s) 1677, 1690
BspT107I GGYRCC 3 cut(s) 946, 1831, 2310
BspTI CTTAAG 1 cut(s) 1027
BspTNI GGTCTC 2 cut(s) 1934, 2806
BsrDI GCAATG 1 cut(s) 1103
BsrGI TGTACA 1 cut(s) 2187
BsrI ACTGG 7 cut(s) 660, 871, 1060, 1620, 1843, 2526, 2611
BssECI CCNNGG 8 cut(s) 261, 1282, 1420, 1548, 1627, 2257, 2875, 2876
BssMI GATC 6 cut(s) 157, 1682, 1723, 2455, 2566, 3028
BssT1I CCWWGG 4 cut(s) 1282, 1420, 1627, 2257
Bst2UI CCWGG 2 cut(s) 187, 263
Bst4CI ACNGT 3 cut(s) 52, 2338, 2710
Bst6I CTCTTC 5 cut(s) 757, 1535, 2010, 2439, 2804
BstAFI CTTAAG 1 cut(s) 1027
BstAPI GCANNNNNTGC 1 cut(s) 406
BstAUI TGTACA 1 cut(s) 2187
BstC8I GCNNGC 2 cut(s) 123, 132
BstDEI CTNAG 8 cut(s) 317, 326, 595, 1364, 1574, 2146, 2410, 2889
BstDSI CCRYGG 2 cut(s) 1420, 2257
BstENI CCTNNNNNAGG 1 cut(s) 594
BstF5I GGATG 4 cut(s) 654, 1251, 2215, 2425
BstH2I RGCGCY 1 cut(s) 128
BstHHI GCGC 1 cut(s) 127
BstKTI GATC 6 cut(s) 160, 1685, 1726, 2458, 2569, 3031
BstMAI GTCTC 6 cut(s) 613, 615, 1934, 1965, 2806, 2874
BstMBI GATC 6 cut(s) 157, 1682, 1723, 2455, 2566, 3028
BstNI CCWGG 2 cut(s) 187, 263
BstNSI RCATGY 6 cut(s) 214, 499, 983, 1603, 2830, 3060
BstSCI CCNGG 4 cut(s) 185, 261, 2875, 2876
BstSFI CTRYAG 3 cut(s) 2483, 2553, 2770
BstSLI GKGCMC 1 cut(s) 2521
BstV1I GCAGC 8 cut(s) 114, 327, 528, 1404, 1908, 2409, 2732, 3040
BstV2I GAAGAC 3 cut(s) 815, 1323, 2471
BstX2I RGATCY 3 cut(s) 157, 1682, 1723
BstXI CCANNNNNNTGG 2 cut(s) 866, 1172
BstYI RGATCY 3 cut(s) 157, 1682, 1723
Bsu36I CCTNAGG 1 cut(s) 595
BsuI GTATCC 1 cut(s) 1190
BsuRI GGCC 2 cut(s) 672, 2610
BtgI CCRYGG 2 cut(s) 1420, 2257
BtgZI GCGATG 1 cut(s) 227
BtrI CACGTC 2 cut(s) 228, 1406
BtsCI GGATG 4 cut(s) 654, 1251, 2215, 2425
BtsI GCAGTG 1 cut(s) 66
BtsIMutI CAGTG 7 cut(s) 66, 364, 864, 1713, 2154, 2519, 2817
Cac8I GCNNGC 2 cut(s) 123, 132
CaiI CAGNNNCTG 1 cut(s) 50
CciI TCATGA 1 cut(s) 1302
CfoI GCGC 1 cut(s) 127
Cfr13I GGNCC 3 cut(s) 265, 583, 870
Cfr9I CCCGGG 1 cut(s) 2876
CseI GACGC 1 cut(s) 2909
Csp6I GTAC 5 cut(s) 947, 1832, 2188, 2392, 2462
CviQI GTAC 5 cut(s) 947, 1832, 2188, 2392, 2462
DdeI CTNAG 8 cut(s) 317, 326, 595, 1364, 1574, 2146, 2410, 2889
DpnI GATC 6 cut(s) 159, 1684, 1725, 2457, 2568, 3030
DpnII GATC 6 cut(s) 157, 1682, 1723, 2455, 2566, 3028
DraI TTTAAA 1 cut(s) 1914
DriI GACNNNNNGTC 1 cut(s) 231
EaeI YGGCCR 2 cut(s) 670, 2608
Eam1104I CTCTTC 5 cut(s) 757, 1535, 2010, 2439, 2804
Eam1105I GACNNNNNGTC 1 cut(s) 231
EarI CTCTTC 5 cut(s) 757, 1535, 2010, 2439, 2804
Ecl136II GAGCTC 2 cut(s) 81, 183
Eco130I CCWWGG 4 cut(s) 1282, 1420, 1627, 2257
Eco24I GRGCYC 2 cut(s) 83, 185
Eco31I GGTCTC 2 cut(s) 1934, 2806
Eco47I GGWCC 3 cut(s) 265, 583, 870
Eco53kI GAGCTC 2 cut(s) 81, 183
Eco57I CTGAAG 4 cut(s) 340, 501, 2463, 3036
Eco81I CCTNAGG 1 cut(s) 595
Eco88I CYCGRG 1 cut(s) 2876
EcoICRI GAGCTC 2 cut(s) 81, 183
EcoNI CCTNNNNNAGG 1 cut(s) 594
EcoO109I RGGNCCY 1 cut(s) 583
EcoRI GAATTC 1 cut(s) 2955
EcoRII CCWGG 2 cut(s) 185, 261
EcoT14I CCWWGG 4 cut(s) 1282, 1420, 1627, 2257
EcoT38I GRGCYC 2 cut(s) 83, 185
ErhI CCWWGG 4 cut(s) 1282, 1420, 1627, 2257
Esp3I CGTCTC 1 cut(s) 615
FalI AAGNNNNNCTT 4 cut(s) 2184, 2216, 2208, 2240
FaqI GGGAC 4 cut(s) 108, 569, 591, 1114
FauNDI CATATG 1 cut(s) 2113
FblI GTMKAC 2 cut(s) 235, 2769
Fnu4HI GCNGC 9 cut(s) 128, 341, 542, 1393, 1897, 2423, 2721, 3021, 3054
FokI GGATG 4 cut(s) 641, 1238, 2222, 2412
FriOI GRGCYC 2 cut(s) 83, 185
Fsp4HI GCNGC 9 cut(s) 128, 341, 542, 1393, 1897, 2423, 2721, 3021, 3054
FspBI CTAG 4 cut(s) 1727, 2009, 2381, 2492
GlaI GCGC 1 cut(s) 126
GluI GCNGC 9 cut(s) 128, 341, 542, 1393, 1897, 2423, 2721, 3021, 3054
GsuI CTGGAG 4 cut(s) 599, 1629, 1860, 2709
HaeII RGCGCY 1 cut(s) 128
HaeIII GGCC 2 cut(s) 672, 2610
HapII CCGG 1 cut(s) 2877
HgaI GACGC 1 cut(s) 2909
HhaI GCGC 1 cut(s) 127
Hin6I GCGC 1 cut(s) 125
HinP1I GCGC 1 cut(s) 125
HincII GTYRAC 3 cut(s) 236, 985, 2754
HindII GTYRAC 3 cut(s) 236, 985, 2754
HindIII AAGCTT 4 cut(s) 962, 1271, 1916, 2292
HpaII CCGG 1 cut(s) 2877
HphI GGTGA 4 cut(s) 1034, 1216, 2774, 2846
Hpy166II GTNNAC 8 cut(s) 236, 985, 2188, 2519, 2754, 2770, 2802, 3062
Hpy8I GTNNAC 8 cut(s) 236, 985, 2188, 2519, 2754, 2770, 2802, 3062
Hpy99I CGWCG 2 cut(s) 115, 240
HpyCH4III ACNGT 3 cut(s) 52, 2338, 2710
HpyCH4IV ACGT 4 cut(s) 227, 1405, 1587, 2583
HpyF3I CTNAG 8 cut(s) 317, 326, 595, 1364, 1574, 2146, 2410, 2889
HpySE526I ACGT 4 cut(s) 227, 1405, 1587, 2583
HspAI GCGC 1 cut(s) 125
KpnI GGTACC 2 cut(s) 950, 1835
Kzo9I GATC 6 cut(s) 157, 1682, 1723, 2455, 2566, 3028
LmnI GCTCC 8 cut(s) 78, 86, 188, 331, 795, 2261, 2406, 2728
Lsp1109I GCAGC 8 cut(s) 114, 327, 528, 1404, 1908, 2409, 2732, 3040
LweI GCATC 2 cut(s) 2434, 3040
MaeI CTAG 4 cut(s) 1727, 2009, 2381, 2492
MaeII ACGT 4 cut(s) 227, 1405, 1587, 2583
MalI GATC 6 cut(s) 159, 1684, 1725, 2457, 2568, 3030
MboI GATC 6 cut(s) 157, 1682, 1723, 2455, 2566, 3028
MfeI CAATTG 3 cut(s) 674, 1430, 2994
MflI RGATCY 3 cut(s) 157, 1682, 1723
MhlI GDGCHC 4 cut(s) 83, 185, 2084, 2521
MlsI TGGCCA 2 cut(s) 672, 2610
MluNI TGGCCA 2 cut(s) 672, 2610
MlyI GAGTC 4 cut(s) 90, 1482, 1779, 2686
MmeI TCCRAC 4 cut(s) 56, 1350, 2674, 2772
Mox20I TGGCCA 2 cut(s) 672, 2610
MscI TGGCCA 2 cut(s) 672, 2610
MslI CAYNNNNRTG 2 cut(s) 500, 2364
Msp20I TGGCCA 2 cut(s) 672, 2610
MspA1I CMGCKG 1 cut(s) 3014
MspCI CTTAAG 1 cut(s) 1027
MspI CCGG 1 cut(s) 2877
MspR9I CCNGG 4 cut(s) 187, 263, 2877, 2878
MunI CAATTG 3 cut(s) 674, 1430, 2994
Mva1269I GAATGC 6 cut(s) 112, 726, 798, 1395, 1421, 2781
MvaI CCWGG 2 cut(s) 187, 263
NciI CCSGG 2 cut(s) 2877, 2878
NcoI CCATGG 2 cut(s) 1420, 2257
NdeI CATATG 1 cut(s) 2113
NdeII GATC 6 cut(s) 157, 1682, 1723, 2455, 2566, 3028
NlaIV GGNNCC 8 cut(s) 585, 602, 871, 948, 1540, 1684, 1833, 2312
NmuCI GTSAC 5 cut(s) 223, 253, 895, 1022, 1964
NspI RCATGY 6 cut(s) 214, 499, 983, 1603, 2830, 3060
PagI TCATGA 1 cut(s) 1302
PciI ACATGT 3 cut(s) 495, 1599, 2826
PctI GAATGC 6 cut(s) 112, 726, 798, 1395, 1421, 2781
PfeI GAWTC 6 cut(s) 194, 952, 1198, 1438, 1717, 2932
PflMI CCANNNNNTGG 4 cut(s) 308, 380, 2435, 2732
PfoI TCCNGGA 1 cut(s) 185
PkrI GCNGC 9 cut(s) 129, 342, 543, 1394, 1898, 2424, 2722, 3022, 3055
PleI GAGTC 4 cut(s) 90, 1482, 1779, 2685
PpsI GAGTC 4 cut(s) 90, 1482, 1779, 2685
PpuMI RGGWCCY 1 cut(s) 583
PscI ACATGT 3 cut(s) 495, 1599, 2826
PsiI TTATAA 4 cut(s) 564, 744, 1449, 2333
Psp124BI GAGCTC 2 cut(s) 83, 185
Psp1406I AACGTT 1 cut(s) 2583
Psp5II RGGWCCY 1 cut(s) 583
Psp6I CCWGG 2 cut(s) 185, 261
PspGI CCWGG 2 cut(s) 185, 261
PspN4I GGNNCC 8 cut(s) 585, 602, 871, 948, 1540, 1684, 1833, 2312
PspPI GGNCC 3 cut(s) 265, 583, 870
PspPPI RGGWCCY 1 cut(s) 583
PstNI CAGNNNCTG 1 cut(s) 50
PsuI RGATCY 3 cut(s) 157, 1682, 1723
PvuII CAGCTG 1 cut(s) 3014
RsaI GTAC 5 cut(s) 948, 1833, 2189, 2393, 2463
RsaNI GTAC 5 cut(s) 947, 1832, 2188, 2392, 2462
RseI CAYNNNNRTG 2 cut(s) 500, 2364
SacI GAGCTC 2 cut(s) 83, 185
SalI GTCGAC 1 cut(s) 234
SatI GCNGC 9 cut(s) 128, 341, 542, 1393, 1897, 2423, 2721, 3021, 3054
Sau3AI GATC 6 cut(s) 157, 1682, 1723, 2455, 2566, 3028
Sau96I GGNCC 3 cut(s) 265, 583, 870
SchI GAGTC 4 cut(s) 90, 1482, 1779, 2686
ScrFI CCNGG 4 cut(s) 187, 263, 2877, 2878
SduI GDGCHC 4 cut(s) 83, 185, 2084, 2521
SfaNI GCATC 2 cut(s) 2434, 3040
SfcI CTRYAG 3 cut(s) 2483, 2553, 2770
SinI GGWCC 3 cut(s) 265, 583, 870
SmaI CCCGGG 1 cut(s) 2878
SmiMI CAYNNNNRTG 2 cut(s) 500, 2364
SmlI CTYRAG 4 cut(s) 1027, 1385, 2570, 2977
SmoI CTYRAG 4 cut(s) 1027, 1385, 2570, 2977
SsiI CCGC 4 cut(s) 417, 1011, 1763, 3021
SspI AATATT 6 cut(s) 888, 1003, 1324, 2305, 2988, 3082
SspMI CTAG 4 cut(s) 1727, 2009, 2381, 2492
SstI GAGCTC 2 cut(s) 83, 185
StyD4I CCNGG 4 cut(s) 185, 261, 2875, 2876
StyI CCWWGG 4 cut(s) 1282, 1420, 1627, 2257
TaaI ACNGT 3 cut(s) 52, 2338, 2710
TaiI ACGT 4 cut(s) 230, 1408, 1590, 2586
TaqI TCGA 5 cut(s) 235, 536, 834, 2267, 3031
TatI WGTACW 2 cut(s) 2187, 2391
TauI GCSGC 1 cut(s) 3023
TfiI GAWTC 6 cut(s) 194, 952, 1198, 1438, 1717, 2932
TscAI CASTG 7 cut(s) 66, 364, 871, 1713, 2154, 2526, 2824
TseFI GTSAC 5 cut(s) 223, 253, 895, 1022, 1964
TseI GCWGC 8 cut(s) 127, 340, 541, 1392, 1896, 2422, 2720, 3053
Tsp45I GTSAC 5 cut(s) 223, 253, 895, 1022, 1964
TspGWI ACGGA 3 cut(s) 128, 1317, 2680
TspMI CCCGGG 1 cut(s) 2876
TspRI CASTG 7 cut(s) 66, 364, 871, 1713, 2154, 2526, 2824
Van91I CCANNNNNTGG 4 cut(s) 308, 380, 2435, 2732
Vha464I CTTAAG 1 cut(s) 1027
VneI GTGCAC 1 cut(s) 2517
VpaK11BI GGWCC 3 cut(s) 265, 583, 870
XagI CCTNNNNNAGG 1 cut(s) 594
XbaI TCTAGA 1 cut(s) 1726
XceI RCATGY 6 cut(s) 214, 499, 983, 1603, 2830, 3060
XmaI CCCGGG 1 cut(s) 2876
XmiI GTMKAC 2 cut(s) 235, 2769
XspI CTAG 4 cut(s) 1727, 2009, 2381, 2492
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.