pycom01g11840

LRR receptor-like serine threonine-protein kinase At3g47570

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
12839374 .. 12842323
2950 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g11840.2

Sequence Viewer

Length: 2853 bp
ATGTTGACGTTGAGGTCCTTGAAGCTTGGAGGCTCTATATCGCCACATGTTGGAAATTTGAGTTTCCTCAGAGCGTTTAATCTCTTCAACAACAGCTTCAGCCATGAAATCCCTCCAGAAATTGGCCGTCTGCGCAGGTTGCAACGTTTGGGATTGGGGAATAATTCACTGACTGGGGAAATTCCCGCTAATTTATCAGGTTGCTCTGAACTCAACTACATAAATGTTGGCGGCAATTTGTTGGAAGGTAGTATCCCTAAGGAGCTTGGCACCTTGTCAAAGCTAAAAGAATTTTTTATTAACGACAACCACCATACAGGAAGTATCCCTTACTCTTTTAGCAACATATCATCTCTTGAATCGTTTGGTGCCATTTTCAATAATTTAGGTGGCATAATTCCAGATATCTTTGGTCGACTGACCAATTTTTATTTTCTTGGATTGGATGGAAATGTCTTGTCTGGTACGATCGATCCCTCAGTTTTCAATCACTCTTCTCTTGAAACCTTTGCTGTGGGACTTAATTACAACCTCCAAGGCACTTTTCCTTCAAACTTGGGCAATTCCTGTCCAAGTCTCCAAACTTTTGCCATCGGTAATAACCAGTTTAGTGGAATTATACCTGTTTCAATTTCTAATGCCTCAAATCTGTTTGAACTAGCATTATACGAAAACCAACTGCATGGAGAATTCCCCTCATTGAAAAATTTACACAAACTTGGGCGGTTTGTTATTAGTTTGAACCATCTTGGAAGTGGGGGAACTGGTGATGATTTGAGCTTTCTTTGCGATCTGACTAATGCCACCGGTTTACAATACTTGGAATTTGATTCAAACAACTTTGGGGGTACGTTGCCTCAATGCGTAGCCAACCTATCTTATTCACTTGTATCCTTCTACGTAGCCTATAACAGTATATTTGGTAATATCCCGAATGCGATGGAAAATCTGCATAACCTGGAAAGCATATGGCTGTCTGGCAACCAGTTTTCAGGTCTCATCCCCCCTGAAATAGGAAGGCTTCCCAAATTATATGAAGTATATATGGAAACCAACTCTCTCACTGGGAATCTTCCATCATCTTTTGGAAATTTAAGTCGACTAGCTCATCTGCATCTCGAGGATAACAACCTTCAGGGCACCATCCCTTCAACTTTGTCTCAGTGTCCCAATTTGCTGAACTTAACTCTTGGTGGTAACAATTTCACTGGTATCATATCCCCAGAATTAATTCGTCTGTCTTCTTCATATGTTCATTTGGATTTATCTCGAAATCATTTGACTGGCTTTCTTCCCATGGAAGTCGGACAATTGATAAATCTAGAGCATCTTGATGTTTCTAGAAACCTGTTGTCTGGTGAAATTCCTCCTAGTCTTGGAAATTGTAAAACCATACAGTATCTTTACTTGCAAGAAAACTTCTTCCAAGGGACAATTCCATCAGATTTGAGCTCACTAAGAGGTATTGAAACCTTATCTCTCGCTCGCAACAACTTGTCTGGGACAATTCCAAAATTCTTAGAGAATTTTACATTTCTGCAATCCTTGAACCTGTCTTATAACAATTTAGAGGGAGCGGTACCTATCGAAGGAGTTTTTCAGAATGCAACTGCCACATCAGTCCAAGGGAATACAAAGCTCTGTGGGGGCATACCAGAGCTTCAATTGCCAAAATGCGAATTTCGACATTCCGGCAAAAGGGGGTTGAGCCTAACCTTGAAACTGGTAATCTCTCTCCTTTGTGGGCTTTCTGGAGCCTTTTTTTCATTTTCCGTTTTGTACCTTTGTTGCTTCCGGAGCAAAAATAAGAAGGATCCTTCGAGTGATTCTGAAAAATTTCGTATGGTGTCTTACCAAAGTCTTCTTAAAGCTACTGATGGATTCTCTTCTGCCAACTTGATTGGTATGGGAAGTTTTGGGTCAGTTTATAAAGGATTACTTGATCAAGGTGAAACAACAATTGCTATCAAGGTACTCAACCTCGATCGACATGGAGCTTCCAAAAGTTTCATTGCTGAGTGTGAGGCTCTGAAAAATATTAGACACCGTAACCTTGTGAAGGTACTCTCTGCATGCTCCGGATTCGACTATCGTGGTTTTAATTTCAAGGCCTTAATTTACGAGTTCATGGTGAATGGGAGCTTAGAGGAATGGTTGCATCCAGCTCAGACAAGTATTGATACAAATCAGAGGCCAAGGAGCTTAACTTTTTCGCAGAGGTTGAACATTGCGATAGATGTTGCAATGGCATTGGATTATCTCCATCATCAGTGTCATGTGCCAATAGTTCATTGTGACCTCAAACCCAGCAATGTTCTTCTCGACGATGATATGATTGGACATGTAAGTGACTTTGGGTTGGCGAGATTCCTTCCAAGTACTCTTGAAGATGGTTTTGGTAATCTGTCAAGCTCCATCGGAGTTAAAGGAACAATCGGTTATACTCCTCCAGAGTATGGCATGGGGCATGAAGTGTGGCCACAAGGTGATGTATATAGTTACGGCATCCTCTTGCTGGAAATGTTTACAGGAAAAAGGCCAACTGGCAACATGTTTCAAGGATCTTCAAATCTTCACAACTATGTCAAGGCAGCTCTGCCCGAGCAGGTGTTAGATACAGTGGATCCGGTTCTTATTCAAGAAAAAGGGGAAGGGGAGATGAGTGCAAACCAGCGTCTAACTGAGGCTAGCACAATGATTCGCATGAAATTTGAAGTGAGCTTGATTTCAATCTTAGGAGTTGGTGTTGCATGCTCTGCAGACATGCCTGCAGAAAGGTCAGACATCACTGATGCTATGGCTGAGATGTGTCGGATCAGAAACAAACTTCGAGCAGATAAAATGTTGGATTAG

Protein Analysis

951

Amino Acids

103.96

Weight (kDa)

5.79

Isoelectric Point (pI)

33.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1560, 1929
AarI CACCTGC 1 cut(s) 2596
AasI GACNNNNNNGTC 1 cut(s) 13
Acc16I TGCGCA 1 cut(s) 134
Acc36I ACCTGC 2 cut(s) 126, 2596
Acc65I GGTACC 1 cut(s) 1579
AccB1I GGYRCC 4 cut(s) 269, 368, 1139, 1579
AccB7I CCANNNNNTGG 3 cut(s) 50, 122, 2456
AccBSI CCGCTC 1 cut(s) 1577
AccI GTMKAC 2 cut(s) 415, 1099
AccIII TCCGGA 2 cut(s) 1794, 2078
AciI CCGC 4 cut(s) 186, 231, 724, 1577
AclI AACGTT 1 cut(s) 145
AclWI GGATC 7 cut(s) 467, 1808, 1821, 2569, 2618, 2631, 2822
AcoI YGGCCR 2 cut(s) 124, 2477
AcuI CTGAAG 2 cut(s) 82, 1118
AdeI CACNNNGTG 1 cut(s) 2486
AfaI GTAC 7 cut(s) 466, 850, 1581, 1781, 1974, 2064, 2380
AfiI CCNNNNNNNGG 9 cut(s) 50, 122, 1013, 1376, 1589, 1698, 2059, 2456, 2515
AflIII ACRYGT 3 cut(s) 46, 2341, 2550
AgeI ACCGGT 1 cut(s) 806
AjnI CCWGG 1 cut(s) 957
AjuI GAANNNNNNNTTGG 6 cut(s) 528, 560, 1419, 1451, 2379, 2411
Alw21I GWGCWC 1 cut(s) 1454
Alw26I GTCTC 3 cut(s) 581, 1001, 1164
AlwI GGATC 7 cut(s) 467, 1808, 1821, 2569, 2618, 2631, 2822
Ama87I CYCGRG 2 cut(s) 1118, 2600
Aor13HI TCCGGA 2 cut(s) 1794, 2078
AoxI GGCC 5 cut(s) 124, 2109, 2192, 2477, 2537
ApeKI GCWGC 1 cut(s) 2591
AseI ATTAAT 1 cut(s) 1229
AsiGI ACCGGT 1 cut(s) 806
Asp700I GAANNNNTTC 2 cut(s) 1230, 1836
Asp718I GGTACC 1 cut(s) 1579
AspLEI GCGC 1 cut(s) 135
AspS9I GGNCC 1 cut(s) 15
AsuHPI GGTGA 5 cut(s) 779, 1370, 1961, 2143, 2498
AsuNHI GCTAGC 1 cut(s) 2687
AvaI CYCGRG 2 cut(s) 1118, 2600
AvaII GGWCC 1 cut(s) 15
AxyI CCTNAGG 1 cut(s) 258
BaeGI GKGCMC 1 cut(s) 1142
BalI TGGCCA 1 cut(s) 2479
BamHI GGATCC 2 cut(s) 1813, 2623
BanI GGYRCC 4 cut(s) 269, 368, 1139, 1579
BanII GRGCYC 1 cut(s) 1454
BbsI GAAGAC 2 cut(s) 1233, 1853
Bbv12I GWGCWC 1 cut(s) 1454
BbvI GCAGC 1 cut(s) 2603
BceAI ACGGC 2 cut(s) 111, 2518
BciT130I CCWGG 1 cut(s) 959
BciVI GTATCC 3 cut(s) 263, 335, 901
BclI TGATCA 1 cut(s) 1942
BcoDI GTCTC 3 cut(s) 581, 1001, 1164
BfaI CTAG 6 cut(s) 659, 1103, 1322, 1341, 1371, 2688
BfmI CTRYAG 2 cut(s) 2757, 2769
BfuAI ACCTGC 2 cut(s) 126, 2596
BfuI GTATCC 3 cut(s) 263, 335, 901
BisI GCNGC 2 cut(s) 232, 2592
BlsI GCNGC 2 cut(s) 233, 2593
BmcAI AGTACT 1 cut(s) 2380
Bme1390I CCNGG 1 cut(s) 959
Bme18I GGWCC 1 cut(s) 15
BmeT110I CYCGRG 2 cut(s) 1118, 2600
BmgT120I GGNCC 1 cut(s) 15
BmiI GGNNCC 7 cut(s) 271, 370, 1141, 1581, 1756, 1815, 2625
BmrFI CCNGG 1 cut(s) 959
BmrI ACTGGG 2 cut(s) 183, 1074
BmsI GCATC 5 cut(s) 1123, 1336, 2167, 2514, 2782
BmtI GCTAGC 1 cut(s) 2691
BmuI ACTGGG 2 cut(s) 183, 1074
BpiI GAAGAC 2 cut(s) 1233, 1853
BpmI CTGGAG 3 cut(s) 99, 1773, 2433
Bsa29I ATCGAT 1 cut(s) 471
BsaAI YACGTR 1 cut(s) 901
BsaBI GATNNNNATC 2 cut(s) 2184, 2729
BsaI GGTCTC 1 cut(s) 1001
BsaJI CCNNGG 5 cut(s) 535, 1296, 1426, 1624, 2195
BsaWI WCCGGW 4 cut(s) 806, 1794, 2078, 2626
BsaXI ACNNNNNCTCC 2 cut(s) 2730, 2760
Bsc4I CCNNNNNNNGG 9 cut(s) 50, 122, 1013, 1376, 1589, 1698, 2059, 2456, 2515
Bse118I RCCGGY 1 cut(s) 806
Bse1I ACTGG 9 cut(s) 178, 604, 769, 985, 1069, 1213, 1288, 1728, 2548
Bse21I CCTNAGG 1 cut(s) 258
Bse3DI GCAATG 4 cut(s) 2010, 2226, 2250, 2317
Bse8I GATNNNNATC 2 cut(s) 2184, 2729
BseAI TCCGGA 2 cut(s) 1794, 2078
BseBI CCWGG 1 cut(s) 959
BseCI ATCGAT 1 cut(s) 471
BseDI CCNNGG 5 cut(s) 535, 1296, 1426, 1624, 2195
BseGI GGATG 5 cut(s) 451, 999, 1143, 2158, 2505
BseJI GATNNNNATC 2 cut(s) 2184, 2729
BseLI CCNNNNNNNGG 9 cut(s) 50, 122, 1013, 1376, 1589, 1698, 2059, 2456, 2515
BseMI GCAATG 4 cut(s) 2010, 2226, 2250, 2317
BseMII CTCAG 7 cut(s) 82, 492, 1175, 2007, 2180, 2673, 2793
BseNI ACTGG 9 cut(s) 178, 604, 769, 985, 1069, 1213, 1288, 1728, 2548
BseRI GAGGAG 1 cut(s) 2436
BseSI GKGCMC 1 cut(s) 1142
BseXI GCAGC 1 cut(s) 2603
BseYI CCCAGC 1 cut(s) 2306
Bsh1285I CGRYCG 2 cut(s) 471, 1987
BshFI GGCC 5 cut(s) 126, 2111, 2194, 2479, 2539
BshNI GGYRCC 4 cut(s) 269, 368, 1139, 1579
BshTI ACCGGT 1 cut(s) 806
BshVI ATCGAT 1 cut(s) 471
BsiEI CGRYCG 2 cut(s) 471, 1987
BsiHKAI GWGCWC 1 cut(s) 1454
BsiHKCI CYCGRG 2 cut(s) 1118, 2600
BsiSI CCGG 5 cut(s) 807, 1692, 1795, 2079, 2627
BslFI GGGAC 4 cut(s) 531, 1152, 1444, 1516
BslI CCNNNNNNNGG 9 cut(s) 50, 122, 1013, 1376, 1589, 1698, 2059, 2456, 2515
BsmAI GTCTC 3 cut(s) 581, 1001, 1164
BsmFI GGGAC 4 cut(s) 531, 1152, 1444, 1516
BsmI GAATGC 2 cut(s) 940, 1609
BsnI GGCC 5 cut(s) 126, 2111, 2194, 2479, 2539
Bso31I GGTCTC 1 cut(s) 1001
BsoBI CYCGRG 2 cut(s) 1118, 2600
Bsp1286I GDGCHC 2 cut(s) 1142, 1454
Bsp13I TCCGGA 2 cut(s) 1794, 2078
Bsp143I GATC 9 cut(s) 468, 472, 790, 1813, 1942, 1984, 2561, 2623, 2814
Bsp19I CCATGG 1 cut(s) 1296
BspACI CCGC 4 cut(s) 186, 231, 724, 1577
BspANI GGCC 5 cut(s) 126, 2111, 2194, 2479, 2539
BspCNI CTCAG 7 cut(s) 81, 491, 1174, 2008, 2179, 2674, 2794
BspDI ATCGAT 1 cut(s) 471
BspEI TCCGGA 2 cut(s) 1794, 2078
BspLI GGNNCC 7 cut(s) 271, 370, 1141, 1581, 1756, 1815, 2625
BspMAI CTGCAG 2 cut(s) 2761, 2773
BspMI ACCTGC 2 cut(s) 126, 2596
BspOI GCTAGC 1 cut(s) 2691
BspPI GGATC 7 cut(s) 467, 1808, 1821, 2569, 2618, 2631, 2822
BspT107I GGYRCC 4 cut(s) 269, 368, 1139, 1579
BspTNI GGTCTC 1 cut(s) 1001
BsrBI CCGCTC 1 cut(s) 1577
BsrDI GCAATG 4 cut(s) 2010, 2226, 2250, 2317
BsrFI RCCGGY 1 cut(s) 806
BsrI ACTGG 9 cut(s) 178, 604, 769, 985, 1069, 1213, 1288, 1728, 2548
BssAI RCCGGY 1 cut(s) 806
BssECI CCNNGG 5 cut(s) 535, 1296, 1426, 1624, 2195
BssMI GATC 9 cut(s) 468, 472, 790, 1813, 1942, 1984, 2561, 2623, 2814
BssT1I CCWWGG 5 cut(s) 535, 1296, 1426, 1624, 2195
Bst2UI CCWGG 1 cut(s) 959
Bst4CI ACNGT 4 cut(s) 914, 1398, 2048, 2620
Bst6I CTCTTC 3 cut(s) 89, 499, 1891
BstAPI GCANNNNNTGC 1 cut(s) 2756
BstBAI YACGTR 1 cut(s) 901
BstC8I GCNNGC 5 cut(s) 1486, 2074, 2689, 2752, 2769
BstDSI CCRYGG 1 cut(s) 1296
BstENI CCTNNNNNAGG 3 cut(s) 1011, 1587, 2057
BstF5I GGATG 5 cut(s) 451, 999, 1143, 2158, 2505
BstHHI GCGC 1 cut(s) 135
BstKTI GATC 9 cut(s) 471, 475, 793, 1816, 1945, 1987, 2564, 2626, 2817
BstMAI GTCTC 3 cut(s) 581, 1001, 1164
BstMBI GATC 9 cut(s) 468, 472, 790, 1813, 1942, 1984, 2561, 2623, 2814
BstMCI CGRYCG 2 cut(s) 471, 1987
BstMWI GCNNNNNNNGC 6 cut(s) 132, 139, 786, 1666, 1797, 2756
BstNI CCWGG 1 cut(s) 959
BstNSI RCATGY 6 cut(s) 50, 2076, 2345, 2554, 2754, 2767
BstSCI CCNGG 1 cut(s) 957
BstSFI CTRYAG 2 cut(s) 2757, 2769
BstSLI GKGCMC 1 cut(s) 1142
BstSNI TACGTA 1 cut(s) 901
BstV1I GCAGC 1 cut(s) 2603
BstV2I GAAGAC 2 cut(s) 1233, 1853
BstX2I RGATCY 3 cut(s) 1813, 2561, 2623
BstXI CCANNNNNNTGG 2 cut(s) 611, 683
BstYI RGATCY 3 cut(s) 1813, 2561, 2623
Bsu15I ATCGAT 1 cut(s) 471
Bsu36I CCTNAGG 1 cut(s) 258
BsuI GTATCC 3 cut(s) 263, 335, 901
BsuRI GGCC 5 cut(s) 126, 2111, 2194, 2479, 2539
BsuTUI ATCGAT 1 cut(s) 471
BtgI CCRYGG 1 cut(s) 1296
BtgZI GCGATG 1 cut(s) 953
BtsCI GGATG 5 cut(s) 451, 999, 1143, 2158, 2505
BtsIMutI CAGTG 7 cut(s) 167, 1062, 1169, 1206, 2276, 2625, 2787
BveI ACCTGC 2 cut(s) 126, 2596
Cac8I GCNNGC 5 cut(s) 1486, 2074, 2689, 2752, 2769
CfoI GCGC 1 cut(s) 135
Cfr10I RCCGGY 1 cut(s) 806
Cfr13I GGNCC 1 cut(s) 15
ClaI ATCGAT 1 cut(s) 471
CseI GACGC 1 cut(s) 2663
Csp6I GTAC 7 cut(s) 465, 849, 1580, 1780, 1973, 2063, 2379
CspAI ACCGGT 1 cut(s) 806
CviQI GTAC 7 cut(s) 465, 849, 1580, 1780, 1973, 2063, 2379
DpnI GATC 9 cut(s) 470, 474, 792, 1815, 1944, 1986, 2563, 2625, 2816
DpnII GATC 9 cut(s) 468, 472, 790, 1813, 1942, 1984, 2561, 2623, 2814
DraIII CACNNNGTG 1 cut(s) 2486
DrdI GACNNNNNNGTC 1 cut(s) 13
DseDI GACNNNNNNGTC 1 cut(s) 13
EaeI YGGCCR 2 cut(s) 124, 2477
Eam1104I CTCTTC 3 cut(s) 89, 499, 1891
EarI CTCTTC 3 cut(s) 89, 499, 1891
Ecl136II GAGCTC 1 cut(s) 1452
Eco105I TACGTA 1 cut(s) 901
Eco130I CCWWGG 5 cut(s) 535, 1296, 1426, 1624, 2195
Eco147I AGGCCT 1 cut(s) 2111
Eco24I GRGCYC 1 cut(s) 1454
Eco31I GGTCTC 1 cut(s) 1001
Eco32I GATATC 1 cut(s) 406
Eco47I GGWCC 1 cut(s) 15
Eco53kI GAGCTC 1 cut(s) 1452
Eco57I CTGAAG 2 cut(s) 82, 1118
Eco81I CCTNAGG 1 cut(s) 258
Eco88I CYCGRG 2 cut(s) 1118, 2600
EcoICRI GAGCTC 1 cut(s) 1452
EcoNI CCTNNNNNAGG 3 cut(s) 1011, 1587, 2057
EcoO109I RGGNCCY 1 cut(s) 15
EcoRI GAATTC 1 cut(s) 689
EcoRII CCWGG 1 cut(s) 957
EcoRV GATATC 1 cut(s) 406
EcoT14I CCWWGG 5 cut(s) 535, 1296, 1426, 1624, 2195
EcoT38I GRGCYC 1 cut(s) 1454
ErhI CCWWGG 5 cut(s) 535, 1296, 1426, 1624, 2195
FalI AAGNNNNNCTT 4 cut(s) 313, 345, 1923, 1955
FaqI GGGAC 4 cut(s) 531, 1152, 1444, 1516
FauI CCCGC 1 cut(s) 193
FauNDI CATATG 2 cut(s) 968, 1249
FbaI TGATCA 1 cut(s) 1942
FblI GTMKAC 2 cut(s) 415, 1099
Fnu4HI GCNGC 2 cut(s) 232, 2592
FokI GGATG 5 cut(s) 458, 986, 1130, 2145, 2492
FriOI GRGCYC 1 cut(s) 1454
Fsp4HI GCNGC 2 cut(s) 232, 2592
FspBI CTAG 6 cut(s) 659, 1103, 1322, 1341, 1371, 2688
FspI TGCGCA 1 cut(s) 134
GlaI GCGC 1 cut(s) 134
GluI GCNGC 2 cut(s) 232, 2592
GsaI CCCAGC 1 cut(s) 2310
GsuI CTGGAG 3 cut(s) 99, 1773, 2433
HaeIII GGCC 5 cut(s) 126, 2111, 2194, 2479, 2539
HapII CCGG 5 cut(s) 807, 1692, 1795, 2079, 2627
HgaI GACGC 1 cut(s) 2663
HhaI GCGC 1 cut(s) 135
Hin6I GCGC 1 cut(s) 133
HinP1I GCGC 1 cut(s) 133
HincII GTYRAC 3 cut(s) 6, 416, 1100
HindII GTYRAC 3 cut(s) 6, 416, 1100
HindIII AAGCTT 1 cut(s) 23
HinfI GANTC 8 cut(s) 359, 830, 1069, 1826, 1881, 2082, 2367, 2698
HpaII CCGG 5 cut(s) 807, 1692, 1795, 2079, 2627
HphI GGTGA 5 cut(s) 779, 1370, 1961, 2143, 2498
Hpy166II GTNNAC 5 cut(s) 6, 416, 812, 1100, 2526
Hpy8I GTNNAC 5 cut(s) 6, 416, 812, 1100, 2526
Hpy99I CGWCG 1 cut(s) 2327
HpyCH4III ACNGT 4 cut(s) 914, 1398, 2048, 2620
HpyCH4IV ACGT 4 cut(s) 8, 145, 851, 900
HpyF10VI GCNNNNNNNGC 6 cut(s) 132, 139, 786, 1666, 1797, 2756
HpySE526I ACGT 4 cut(s) 8, 145, 851, 900
HspAI GCGC 1 cut(s) 133
Kpn2I TCCGGA 2 cut(s) 1794, 2078
KpnI GGTACC 1 cut(s) 1583
Ksp22I TGATCA 1 cut(s) 1942
Kzo9I GATC 9 cut(s) 468, 472, 790, 1813, 1942, 1984, 2561, 2623, 2814
LmnI GCTCC 9 cut(s) 262, 1574, 1754, 1797, 1994, 2081, 2139, 2199, 2417
Lsp1109I GCAGC 1 cut(s) 2603
LweI GCATC 5 cut(s) 1123, 1336, 2167, 2514, 2782
MaeI CTAG 6 cut(s) 659, 1103, 1322, 1341, 1371, 2688
MaeII ACGT 4 cut(s) 8, 145, 851, 900
MaeIII GTNAC 5 cut(s) 1196, 2048, 2294, 2348, 2498
MalI GATC 9 cut(s) 470, 474, 792, 1815, 1944, 1986, 2563, 2625, 2816
MbiI CCGCTC 1 cut(s) 1577
MboI GATC 9 cut(s) 468, 472, 790, 1813, 1942, 1984, 2561, 2623, 2814
MfeI CAATTG 3 cut(s) 1310, 1664, 1959
MflI RGATCY 3 cut(s) 1813, 2561, 2623
MhlI GDGCHC 2 cut(s) 1142, 1454
MlsI TGGCCA 1 cut(s) 2479
MluNI TGGCCA 1 cut(s) 2479
MmeI TCCRAC 5 cut(s) 31, 222, 1285, 2792, 2826
Mox20I TGGCCA 1 cut(s) 2479
MroI TCCGGA 2 cut(s) 1794, 2078
MroXI GAANNNNTTC 2 cut(s) 1230, 1836
MscI TGGCCA 1 cut(s) 2479
MslI CAYNNNNRTG 3 cut(s) 1332, 2346, 2580
Msp20I TGGCCA 1 cut(s) 2479
MspI CCGG 5 cut(s) 807, 1692, 1795, 2079, 2627
MspR9I CCNGG 1 cut(s) 959
MunI CAATTG 3 cut(s) 1310, 1664, 1959
Mva1269I GAATGC 2 cut(s) 940, 1609
MvaI CCWGG 1 cut(s) 959
MwoI GCNNNNNNNGC 6 cut(s) 132, 139, 786, 1666, 1797, 2756
NcoI CCATGG 1 cut(s) 1296
NdeI CATATG 2 cut(s) 968, 1249
NdeII GATC 9 cut(s) 468, 472, 790, 1813, 1942, 1984, 2561, 2623, 2814
NheI GCTAGC 1 cut(s) 2687
NlaIV GGNNCC 7 cut(s) 271, 370, 1141, 1581, 1756, 1815, 2625
NmuCI GTSAC 2 cut(s) 2294, 2348
NsbI TGCGCA 1 cut(s) 134
NspI RCATGY 6 cut(s) 50, 2076, 2345, 2554, 2754, 2767
PaeI GCATGC 2 cut(s) 2076, 2754
PaeR7I CTCGAG 1 cut(s) 1118
PaqCI CACCTGC 1 cut(s) 2596
PceI AGGCCT 1 cut(s) 2111
PciI ACATGT 3 cut(s) 46, 2341, 2550
PctI GAATGC 2 cut(s) 940, 1609
PdmI GAANNNNTTC 2 cut(s) 1230, 1836
PfeI GAWTC 8 cut(s) 359, 830, 1069, 1826, 1881, 2082, 2367, 2698
PflMI CCANNNNNTGG 3 cut(s) 50, 122, 2456
PinAI ACCGGT 1 cut(s) 806
PkrI GCNGC 2 cut(s) 233, 2593
Ple19I CGATCG 2 cut(s) 471, 1987
Ppu21I YACGTR 1 cut(s) 901
PpuMI RGGWCCY 1 cut(s) 15
PscI ACATGT 3 cut(s) 46, 2341, 2550
PshBI ATTAAT 1 cut(s) 1229
PsiI TTATAA 2 cut(s) 1560, 1929
Psp124BI GAGCTC 1 cut(s) 1454
Psp1406I AACGTT 1 cut(s) 145
Psp5II RGGWCCY 1 cut(s) 15
Psp6I CCWGG 1 cut(s) 957
PspFI CCCAGC 1 cut(s) 2306
PspGI CCWGG 1 cut(s) 957
PspN4I GGNNCC 7 cut(s) 271, 370, 1141, 1581, 1756, 1815, 2625
PspPI GGNCC 1 cut(s) 15
PspPPI RGGWCCY 1 cut(s) 15
PstI CTGCAG 2 cut(s) 2761, 2773
PsuI RGATCY 3 cut(s) 1813, 2561, 2623
PvuI CGATCG 2 cut(s) 471, 1987
RsaI GTAC 7 cut(s) 466, 850, 1581, 1781, 1974, 2064, 2380
RsaNI GTAC 7 cut(s) 465, 849, 1580, 1780, 1973, 2063, 2379
RseI CAYNNNNRTG 3 cut(s) 1332, 2346, 2580
SacI GAGCTC 1 cut(s) 1454
SalI GTCGAC 2 cut(s) 414, 1098
SatI GCNGC 2 cut(s) 232, 2592
Sau3AI GATC 9 cut(s) 468, 472, 790, 1813, 1942, 1984, 2561, 2623, 2814
Sau96I GGNCC 1 cut(s) 15
ScaI AGTACT 1 cut(s) 2380
ScrFI CCNGG 1 cut(s) 959
SduI GDGCHC 2 cut(s) 1142, 1454
SfaNI GCATC 5 cut(s) 1123, 1336, 2167, 2514, 2782
SfcI CTRYAG 2 cut(s) 2757, 2769
Sfr274I CTCGAG 1 cut(s) 1118
SinI GGWCC 1 cut(s) 15
SlaI CTCGAG 1 cut(s) 1118
SmiMI CAYNNNNRTG 3 cut(s) 1332, 2346, 2580
SmlI CTYRAG 1 cut(s) 1118
SmoI CTYRAG 1 cut(s) 1118
SnaBI TACGTA 1 cut(s) 901
SphI GCATGC 2 cut(s) 2076, 2754
SseBI AGGCCT 1 cut(s) 2111
SsiI CCGC 4 cut(s) 186, 231, 724, 1577
SspI AATATT 1 cut(s) 2038
SspMI CTAG 6 cut(s) 659, 1103, 1322, 1341, 1371, 2688
SstI GAGCTC 1 cut(s) 1454
StuI AGGCCT 1 cut(s) 2111
StyD4I CCNGG 1 cut(s) 957
StyI CCWWGG 5 cut(s) 535, 1296, 1426, 1624, 2195
TaaI ACNGT 4 cut(s) 914, 1398, 2048, 2620
TaiI ACGT 4 cut(s) 11, 148, 854, 903
TatI WGTACW 1 cut(s) 2378
TauI GCSGC 1 cut(s) 234
TfiI GAWTC 8 cut(s) 359, 830, 1069, 1826, 1881, 2082, 2367, 2698
TscAI CASTG 7 cut(s) 174, 1069, 1169, 1213, 2276, 2625, 2794
TseFI GTSAC 2 cut(s) 2294, 2348
TseI GCWGC 1 cut(s) 2591
Tsp45I GTSAC 2 cut(s) 2294, 2348
TspGWI ACGGA 1 cut(s) 1762
TspRI CASTG 7 cut(s) 174, 1069, 1169, 1213, 2276, 2625, 2794
Van91I CCANNNNNTGG 3 cut(s) 50, 122, 2456
VpaK11BI GGWCC 1 cut(s) 15
VspI ATTAAT 1 cut(s) 1229
XagI CCTNNNNNAGG 3 cut(s) 1011, 1587, 2057
XbaI TCTAGA 2 cut(s) 1321, 1340
XceI RCATGY 6 cut(s) 50, 2076, 2345, 2554, 2754, 2767
XcmI CCANNNNNNNNNTGG 1 cut(s) 752
XhoI CTCGAG 1 cut(s) 1118
XmiI GTMKAC 2 cut(s) 415, 1099
XmnI GAANNNNTTC 2 cut(s) 1230, 1836
XspI CTAG 6 cut(s) 659, 1103, 1322, 1341, 1371, 2688
ZrmI AGTACT 1 cut(s) 2380
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.