Rorug01G0247200
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
35462504 .. 35470416
7913 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0247200.1

Sequence Viewer

Length: 2016 bp
ATGTCGTTTTCAGACTCTGAATCCTCTTCCCATGGCGGAGTCTCGGAGTACAAGTGTTTCCGTCAGTTCAGCCGTGACCGGTTATTGCACGAAATGCTTGGATCAACCAGAACGGAGAATTCCAAGTCTTGGAAGGTGCTCATCATGGATAAAGTGACAGTGAAAGTCATGTCCCATTCATGTAAAATGGCAGATATCACAGACCAAGAAATTTCATTGGTGGAAGACCTTTTTCGGAGGAGGGAGCCATTGCCGTCAATGGATGTTATTTATTTTATCCAGCCAACAAAAGAGAATATTGTCATGCTCTTGTCTGACATGTCTGGAAGGGAGCCTTTATACAGGAAAGCGTTCATATTTTTCAGTTCACCTATCCCAAAGGAACTTGTAAATCACATAAAGAGTGATACAAGTGTTTTACCACGTATAGGTGCATTGAGAGAGATGAATTTGGAATACTTTCCCATAGATAATCAGGCTTTTATCACTGATCAAGATAGGGCATTGGAGGAGCTTTTCGGTGATGTTGAGAATTCTAAGAGAGTCGAGAAGTGCTTGAACATAATGGCAACTCGAATTGCGACAGTTTTTGCTTCAATGAAGGAGCTGCCATATGTGCGATACCGTGCTTCCAAGGCACTGGATGAATCAGCAGAAGCAACACCTCGTGATTTAATTCCTACAAAGCTTGCTACTGCTGTTTGGGACATTCTTTCAAAATATAAATCTTCTATTCCCAACTTTCCACAGAAAGAAACATGCGACTTACTCATCTTGGATAGAACTGTTGATCAGATTGCTCCTGTCATACACGAATGGACATATGATGCTATGTGTCACGATTTATTGAATATGGATGGCAACAAATATGTGCATGAGGTTCCTAGCAAAACTGGTGGAGATCCTGAGAGAAAGGAGGTCCTTTTGGAAGATAATGATCCTGTCTGGCTCGAGATTCGCCATACACATATAGCAGATGCTAGTGAACGATTGAGCGACAAGTTCTCCACCTTTCAATCAAAGAATAAAGCTGCACAGCTCCAACAGAGTGCAAGAGATGGCAATGAATTATCTACACGGGACTTGCAGAAAATGGTTCAAGCTCTGCCACAATACACTGAACAAATGGAAAAGATTTCTCTCCATGTTGAGATTGCAGGAAAACTTAACAAAATCATCAGGGAAACAGGACTTCGAGACCTTGGGCAACTGGAGCAGGATCTTGTTTTTGGAGATGCAGGAGCCAAGGATGTCATCAATTATCTGAGGACCAATCAGGATACAAGTCCTGAAAATAAGTTGCGTTTGCTAATGATTTATGCCTCTGTATATCCTGAGAAGTTTGAAGGGGACAAAGCTAATAAGCTAATGCAGTTGGCAAGGTTATCACATGAGGACATGAAGGTTGTGGATAACATGCGATCGCTTAAGGGATCATCAGATTCCAAAAAGACGACTGGTAGCTTTTCACTCAAGTTCAATAATGCGAAGACTAAACAAGCAGCGAGAAAGGATCGTGAAGGTGAAGAGGAGGAAACGTGGCAATTATTCCGATTTTTTCCACTGATGGAGGAACTCATTGAAAATCTTAACAAAGGTCTATTACCAAAGGATGAGTATTCATGTATGAATGAACCTGGTCCAACTCCTGAGCCAGGAAGCCAGAGGCGTACTCAGAGTACATCTGAAAGGTCAACTCAGTCGACTAATCCCCATTCGATAAGATCAAGGAGAACTGCAAATTGGGGACGGGCTCGGCATTCTGATGATGGATATTCAAGTGATTCGATTTTGAGAGGTGAGTCTACGGATTTCAAGAAGTTGGGGAAACGTATTTTTGTATTTATGATTGGTGGGGCAACTCGATCGGAGCTACGAGTTTGTTACAAGATGACAACAAAATTGAAAAGGGAAGTAATCCTTGGAACTACCAGTATCCAAGAACCACCACAGTATATTACGAAACTGAAGCTGCTATCAGAAAAAGAACTGTCAGTTGATGGCCTTAAACTCTAA

Protein Analysis

671

Amino Acids

76.73

Weight (kDa)

6.72

Isoelectric Point (pI)

49.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sec1 PF00995 45 - 654 3.5e-132 Sec1 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 129
AccI GTMKAC 2 cut(s) 1703, 1805
AciI CCGC 1 cut(s) 36
AclWI GGATC 6 cut(s) 109, 896, 932, 1227, 1441, 1521
AcsI RAATTY 4 cut(s) 118, 210, 448, 532
AcuI CTGAAG 1 cut(s) 1988
AdeI CACNNNGTG 1 cut(s) 668
AfaI GTAC 3 cut(s) 50, 1672, 1681
AfiI CCNNNNNNNGG 3 cut(s) 129, 428, 1655
AflII CTTAAG 1 cut(s) 1427
AflIII ACRYGT 1 cut(s) 318
AgeI ACCGGT 1 cut(s) 78
AjnI CCWGG 2 cut(s) 1636, 1654
AjuI GAANNNNNNNTTGG 4 cut(s) 1726, 1758, 1905, 1937
Alw21I GWGCWC 1 cut(s) 141
Alw26I GTCTC 2 cut(s) 46, 1191
AlwI GGATC 6 cut(s) 109, 896, 932, 1227, 1441, 1521
AlwNI CAGNNNCTG 1 cut(s) 17
Ama87I CYCGRG 1 cut(s) 950
AoxI GGCC 1 cut(s) 2002
ApeKI GCWGC 4 cut(s) 607, 1031, 1502, 1972
ApoI RAATTY 4 cut(s) 118, 210, 448, 532
AsiGI ACCGGT 1 cut(s) 78
AsiSI GCGATCGC 1 cut(s) 1424
Asp700I GAANNNNTTC 2 cut(s) 350, 459
AspS9I GGNCC 3 cut(s) 919, 1269, 1640
AsuHPI GGTGA 4 cut(s) 360, 533, 1535, 1811
AvaI CYCGRG 1 cut(s) 950
AvaII GGWCC 3 cut(s) 919, 1269, 1640
BaeI ACNNNNGTAYC 2 cut(s) 399, 432
BanII GRGCYC 1 cut(s) 1756
BauI CACGAG 1 cut(s) 666
BbsI GAAGAC 2 cut(s) 231, 1496
Bbv12I GWGCWC 1 cut(s) 141
BbvI GCAGC 4 cut(s) 594, 1018, 1514, 1959
BccI CCATC 5 cut(s) 851, 1052, 1561, 1763, 1994
BceAI ACGGC 2 cut(s) 57, 238
BcgI CGANNNNNNTGC 2 cut(s) 1848, 1882
BciT130I CCWGG 2 cut(s) 1638, 1656
BciVI GTATCC 2 cut(s) 1273, 1946
BclI TGATCA 2 cut(s) 490, 790
BcoDI GTCTC 2 cut(s) 46, 1191
BfaI CTAG 2 cut(s) 885, 981
BfrI CTTAAG 1 cut(s) 1427
BfuI GTATCC 2 cut(s) 1273, 1946
BisI GCNGC 4 cut(s) 608, 1032, 1503, 1973
BlsI GCNGC 4 cut(s) 609, 1033, 1504, 1974
Bme1390I CCNGG 2 cut(s) 1638, 1656
Bme18I GGWCC 3 cut(s) 919, 1269, 1640
BmeT110I CYCGRG 1 cut(s) 950
BmgT120I GGNCC 3 cut(s) 919, 1269, 1640
BmiI GGNNCC 4 cut(s) 246, 333, 882, 1243
BmrFI CCNGG 2 cut(s) 1638, 1656
BmsI GCATC 3 cut(s) 817, 967, 1225
BpiI GAAGAC 2 cut(s) 231, 1496
BplI GAGNNNNNCTC 2 cut(s) 1657, 1689
BpmI CTGGAG 1 cut(s) 1232
Bpu10I CCTNAGC 1 cut(s) 1650
BpuEI CTTGAG 1 cut(s) 1457
BsaAI YACGTR 1 cut(s) 425
BsaBI GATNNNNATC 1 cut(s) 936
BsaI GGTCTC 1 cut(s) 1191
BsaJI CCNNGG 5 cut(s) 31, 633, 1201, 1245, 1921
BsaWI WCCGGW 1 cut(s) 78
BsaXI ACNNNNNCTCC 6 cut(s) 38, 68, 989, 1019, 1523, 1553
Bsc4I CCNNNNNNNGG 3 cut(s) 129, 428, 1655
Bse118I RCCGGY 1 cut(s) 78
Bse1I ACTGG 5 cut(s) 645, 898, 1215, 1462, 1932
Bse3DI GCAATG 2 cut(s) 248, 1069
Bse8I GATNNNNATC 1 cut(s) 936
BseBI CCWGG 2 cut(s) 1638, 1656
BseDI CCNNGG 5 cut(s) 31, 633, 1201, 1245, 1921
BseGI GGATG 5 cut(s) 268, 649, 862, 1255, 1618
BseJI GATNNNNATC 1 cut(s) 936
BseLI CCNNNNNNNGG 3 cut(s) 129, 428, 1655
BseMI GCAATG 2 cut(s) 248, 1069
BseMII CTCAG 6 cut(s) 897, 1256, 1326, 1641, 1688, 1712
BseNI ACTGG 5 cut(s) 645, 898, 1215, 1462, 1932
BseRI GAGGAG 3 cut(s) 253, 524, 1544
BseXI GCAGC 4 cut(s) 594, 1018, 1514, 1959
BsgI GTGCAG 1 cut(s) 1017
Bsh1285I CGRYCG 2 cut(s) 1424, 1868
BshFI GGCC 1 cut(s) 2004
BshTI ACCGGT 1 cut(s) 78
BsiEI CGRYCG 2 cut(s) 1424, 1868
BsiHKAI GWGCWC 1 cut(s) 141
BsiHKCI CYCGRG 1 cut(s) 950
BsiSI CCGG 1 cut(s) 79
BslFI GGGAC 5 cut(s) 157, 719, 1094, 1364, 1761
BslI CCNNNNNNNGG 3 cut(s) 129, 428, 1655
BsmAI GTCTC 2 cut(s) 46, 1191
BsmFI GGGAC 5 cut(s) 157, 719, 1094, 1364, 1761
BsmI GAATGC 1 cut(s) 1759
BsnI GGCC 1 cut(s) 2004
Bso31I GGTCTC 1 cut(s) 1191
BsoBI CYCGRG 1 cut(s) 950
Bsp1286I GDGCHC 2 cut(s) 141, 1756
Bsp19I CCATGG 1 cut(s) 31
BspACI CCGC 1 cut(s) 36
BspANI GGCC 1 cut(s) 2004
BspCNI CTCAG 6 cut(s) 898, 1257, 1327, 1642, 1687, 1711
BspLI GGNNCC 4 cut(s) 246, 333, 882, 1243
BspPI GGATC 6 cut(s) 109, 896, 932, 1227, 1441, 1521
BspTI CTTAAG 1 cut(s) 1427
BspTNI GGTCTC 1 cut(s) 1191
BsrDI GCAATG 2 cut(s) 248, 1069
BsrFI RCCGGY 1 cut(s) 78
BsrI ACTGG 5 cut(s) 645, 898, 1215, 1462, 1932
BssAI RCCGGY 1 cut(s) 78
BssECI CCNNGG 5 cut(s) 31, 633, 1201, 1245, 1921
BssSI CACGAG 1 cut(s) 666
BssT1I CCWWGG 5 cut(s) 31, 633, 1201, 1245, 1921
Bst2BI CACGAG 1 cut(s) 666
Bst2UI CCWGG 2 cut(s) 1638, 1656
Bst4CI ACNGT 6 cut(s) 160, 586, 626, 787, 1953, 1992
Bst6I CTCTTC 2 cut(s) 31, 1521
BstAFI CTTAAG 1 cut(s) 1427
BstAPI GCANNNNNTGC 1 cut(s) 94
BstBAI YACGTR 1 cut(s) 425
BstC8I GCNNGC 1 cut(s) 690
BstDEI CTNAG 7 cut(s) 537, 906, 1265, 1335, 1650, 1674, 1698
BstDSI CCRYGG 1 cut(s) 31
BstENI CCTNNNNNAGG 1 cut(s) 1653
BstF5I GGATG 5 cut(s) 268, 649, 862, 1255, 1618
BstMAI GTCTC 2 cut(s) 46, 1191
BstMCI CGRYCG 2 cut(s) 1424, 1868
BstMWI GCNNNNNNNGC 4 cut(s) 94, 616, 635, 1213
BstNI CCWGG 2 cut(s) 1638, 1656
BstNSI RCATGY 3 cut(s) 322, 762, 1420
BstSCI CCNGG 2 cut(s) 1636, 1654
BstV1I GCAGC 4 cut(s) 594, 1018, 1514, 1959
BstV2I GAAGAC 2 cut(s) 231, 1496
BstX2I RGATCY 2 cut(s) 901, 1219
BstXI CCANNNNNNTGG 1 cut(s) 640
BstYI RGATCY 2 cut(s) 901, 1219
BsuI GTATCC 2 cut(s) 1273, 1946
BsuRI GGCC 1 cut(s) 2004
BtgI CCRYGG 1 cut(s) 31
BtsCI GGATG 5 cut(s) 268, 649, 862, 1255, 1618
BtsIMutI CAGTG 5 cut(s) 165, 486, 638, 1116, 1562
Cac8I GCNNGC 1 cut(s) 690
CaiI CAGNNNCTG 1 cut(s) 17
Cfr10I RCCGGY 1 cut(s) 78
Cfr13I GGNCC 3 cut(s) 919, 1269, 1640
CsiI ACCWGGT 1 cut(s) 1636
Csp6I GTAC 3 cut(s) 49, 1671, 1680
CspAI ACCGGT 1 cut(s) 78
CspCI CAANNNNNGTGG 2 cut(s) 877, 912
CviQI GTAC 3 cut(s) 49, 1671, 1680
DdeI CTNAG 7 cut(s) 537, 906, 1265, 1335, 1650, 1674, 1698
DraIII CACNNNGTG 1 cut(s) 668
Eam1104I CTCTTC 2 cut(s) 31, 1521
EarI CTCTTC 2 cut(s) 31, 1521
EciI GGCGGA 1 cut(s) 51
Eco130I CCWWGG 5 cut(s) 31, 633, 1201, 1245, 1921
Eco24I GRGCYC 1 cut(s) 1756
Eco31I GGTCTC 1 cut(s) 1191
Eco32I GATATC 1 cut(s) 196
Eco47I GGWCC 3 cut(s) 919, 1269, 1640
Eco57I CTGAAG 1 cut(s) 1988
Eco88I CYCGRG 1 cut(s) 950
EcoNI CCTNNNNNAGG 1 cut(s) 1653
EcoO109I RGGNCCY 1 cut(s) 919
EcoRI GAATTC 2 cut(s) 118, 532
EcoRII CCWGG 2 cut(s) 1636, 1654
EcoRV GATATC 1 cut(s) 196
EcoT14I CCWWGG 5 cut(s) 31, 633, 1201, 1245, 1921
EcoT38I GRGCYC 1 cut(s) 1756
ErhI CCWWGG 5 cut(s) 31, 633, 1201, 1245, 1921
FalI AAGNNNNNCTT 4 cut(s) 319, 351, 1905, 1937
FaqI GGGAC 5 cut(s) 157, 719, 1094, 1364, 1761
FauNDI CATATG 2 cut(s) 613, 823
FbaI TGATCA 2 cut(s) 490, 790
FblI GTMKAC 2 cut(s) 1703, 1805
Fnu4HI GCNGC 4 cut(s) 608, 1032, 1503, 1973
FokI GGATG 5 cut(s) 275, 656, 869, 1262, 1625
FriOI GRGCYC 1 cut(s) 1756
Fsp4HI GCNGC 4 cut(s) 608, 1032, 1503, 1973
FspBI CTAG 2 cut(s) 885, 981
GluI GCNGC 4 cut(s) 608, 1032, 1503, 1973
GsuI CTGGAG 1 cut(s) 1232
HaeIII GGCC 1 cut(s) 2004
HapII CCGG 1 cut(s) 79
HincII GTYRAC 2 cut(s) 1695, 1704
HindII GTYRAC 2 cut(s) 1695, 1704
HindIII AAGCTT 1 cut(s) 686
HinfI GANTC 9 cut(s) 14, 20, 39, 543, 647, 955, 1442, 1784, 1802
HpaII CCGG 1 cut(s) 79
HphI GGTGA 4 cut(s) 360, 533, 1535, 1811
Hpy166II GTNNAC 5 cut(s) 368, 986, 1695, 1704, 1806
Hpy8I GTNNAC 5 cut(s) 368, 986, 1695, 1704, 1806
HpyAV CCTTC 6 cut(s) 127, 321, 595, 1340, 1396, 1514
HpyCH4III ACNGT 6 cut(s) 160, 586, 626, 787, 1953, 1992
HpyCH4IV ACGT 3 cut(s) 424, 1538, 1831
HpyF10VI GCNNNNNNNGC 4 cut(s) 94, 616, 635, 1213
HpyF3I CTNAG 7 cut(s) 537, 906, 1265, 1335, 1650, 1674, 1698
HpySE526I ACGT 3 cut(s) 424, 1538, 1831
Ksp22I TGATCA 2 cut(s) 490, 790
LmnI GCTCC 9 cut(s) 244, 331, 511, 604, 805, 1044, 1213, 1241, 1870
Lsp1109I GCAGC 4 cut(s) 594, 1018, 1514, 1959
LweI GCATC 3 cut(s) 817, 967, 1225
MabI ACCWGGT 1 cut(s) 1636
MaeI CTAG 2 cut(s) 885, 981
MaeII ACGT 3 cut(s) 424, 1538, 1831
MaeIII GTNAC 4 cut(s) 74, 154, 836, 1883
MboII GAAGA 6 cut(s) 18, 236, 720, 941, 1501, 1538
MflI RGATCY 2 cut(s) 901, 1219
MhlI GDGCHC 2 cut(s) 141, 1756
MlyI GAGTC 4 cut(s) 8, 48, 552, 1811
MmeI TCCRAC 2 cut(s) 1066, 1667
MroXI GAANNNNTTC 2 cut(s) 350, 459
MseI TTAA 5 cut(s) 674, 1167, 1428, 1590, 2007
MslI CAYNNNNRTG 1 cut(s) 1764
MspCI CTTAAG 1 cut(s) 1427
MspI CCGG 1 cut(s) 79
MspR9I CCNGG 2 cut(s) 1638, 1656
Mva1269I GAATGC 1 cut(s) 1759
MvaI CCWGG 2 cut(s) 1638, 1656
MwoI GCNNNNNNNGC 4 cut(s) 94, 616, 635, 1213
NcoI CCATGG 1 cut(s) 31
NdeI CATATG 2 cut(s) 613, 823
NlaIV GGNNCC 4 cut(s) 246, 333, 882, 1243
NmeAIII GCCGAG 1 cut(s) 1735
NmuCI GTSAC 3 cut(s) 74, 154, 836
NspI RCATGY 3 cut(s) 322, 762, 1420
PaeR7I CTCGAG 1 cut(s) 950
PciI ACATGT 1 cut(s) 318
PctI GAATGC 1 cut(s) 1759
PdmI GAANNNNTTC 2 cut(s) 350, 459
PfeI GAWTC 5 cut(s) 20, 647, 955, 1442, 1784
PflMI CCANNNNNTGG 1 cut(s) 129
PinAI ACCGGT 1 cut(s) 78
PkrI GCNGC 4 cut(s) 609, 1033, 1504, 1974
Ple19I CGATCG 2 cut(s) 1424, 1868
PleI GAGTC 4 cut(s) 8, 47, 551, 1810
PpsI GAGTC 4 cut(s) 8, 47, 551, 1810
Ppu21I YACGTR 1 cut(s) 425
PpuMI RGGWCCY 1 cut(s) 919
PscI ACATGT 1 cut(s) 318
Psp5II RGGWCCY 1 cut(s) 919
Psp6I CCWGG 2 cut(s) 1636, 1654
PspGI CCWGG 2 cut(s) 1636, 1654
PspN4I GGNNCC 4 cut(s) 246, 333, 882, 1243
PspPI GGNCC 3 cut(s) 919, 1269, 1640
PspPPI RGGWCCY 1 cut(s) 919
PstNI CAGNNNCTG 1 cut(s) 17
PsuI RGATCY 2 cut(s) 901, 1219
PvuI CGATCG 2 cut(s) 1424, 1868
RgaI GCGATCGC 1 cut(s) 1424
RsaI GTAC 3 cut(s) 50, 1672, 1681
RsaNI GTAC 3 cut(s) 49, 1671, 1680
RseI CAYNNNNRTG 1 cut(s) 1764
SalI GTCGAC 1 cut(s) 1702
SaqAI TTAA 5 cut(s) 674, 1167, 1428, 1590, 2007
SatI GCNGC 4 cut(s) 608, 1032, 1503, 1973
Sau96I GGNCC 3 cut(s) 919, 1269, 1640
SchI GAGTC 4 cut(s) 8, 48, 552, 1811
ScrFI CCNGG 2 cut(s) 1638, 1656
SduI GDGCHC 2 cut(s) 141, 1756
SexAI ACCWGGT 1 cut(s) 1636
SfaAI GCGATCGC 1 cut(s) 1424
SfaNI GCATC 3 cut(s) 817, 967, 1225
Sfr274I CTCGAG 1 cut(s) 950
SgfI GCGATCGC 1 cut(s) 1424
SinI GGWCC 3 cut(s) 919, 1269, 1640
SlaI CTCGAG 1 cut(s) 950
SmiMI CAYNNNNRTG 1 cut(s) 1764
SmlI CTYRAG 3 cut(s) 950, 1427, 1472
SmoI CTYRAG 3 cut(s) 950, 1427, 1472
SsiI CCGC 1 cut(s) 36
SspI AATATT 1 cut(s) 298
SspMI CTAG 2 cut(s) 885, 981
StyD4I CCNGG 2 cut(s) 1636, 1654
StyI CCWWGG 5 cut(s) 31, 633, 1201, 1245, 1921
TaaI ACNGT 6 cut(s) 160, 586, 626, 787, 1953, 1992
TaiI ACGT 3 cut(s) 427, 1541, 1834
TaqI TCGA 8 cut(s) 546, 574, 951, 1195, 1703, 1718, 1787, 1864
TatI WGTACW 2 cut(s) 48, 1679
TfiI GAWTC 5 cut(s) 20, 647, 955, 1442, 1784
Tru1I TTAA 5 cut(s) 674, 1167, 1428, 1590, 2007
Tru9I TTAA 5 cut(s) 674, 1167, 1428, 1590, 2007
TscAI CASTG 5 cut(s) 165, 493, 645, 1123, 1569
TseFI GTSAC 3 cut(s) 74, 154, 836
TseI GCWGC 4 cut(s) 607, 1031, 1502, 1972
Tsp45I GTSAC 3 cut(s) 74, 154, 836
TspGWI ACGGA 3 cut(s) 50, 128, 1823
TspRI CASTG 5 cut(s) 165, 493, 645, 1123, 1569
Van91I CCANNNNNTGG 1 cut(s) 129
Vha464I CTTAAG 1 cut(s) 1427
VpaK11BI GGWCC 3 cut(s) 919, 1269, 1640
XagI CCTNNNNNAGG 1 cut(s) 1653
XapI RAATTY 4 cut(s) 118, 210, 448, 532
XceI RCATGY 3 cut(s) 322, 762, 1420
XhoI CTCGAG 1 cut(s) 950
XmiI GTMKAC 2 cut(s) 1703, 1805
XmnI GAANNNNTTC 2 cut(s) 350, 459
XspI CTAG 2 cut(s) 885, 981
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.