pycom07g07140
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
6473672 .. 6476882
3211 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g07140.1

Sequence Viewer

Length: 2565 bp
ATGGGGATGGGGTTTTACAACTCCATTTCTGCATTGTTTTTGTCATCCTTTTTTATGCATGCTTTCATTCCCCACTCTTGCCTTCCTTGTTTCGCCCTTCCGGGAAATGAGACAGATAGACTCGCTTTGCTTGAAATCAAGGCTAGCATAACTCATGACCCTTTTAAAGTCCTGACTTCATGGAATGAAACCATCCACTTTTGCTCTTGGCATGGCGTTACATGTGGTCGTCGTCATAAGAGGGTCACAAGCTTGAGCCTGCGGTCCTTGAAACTTGGAGGATCTATGTCGCCGCATGTTGGGAACTTGAGTTTTTTGAGAGTCATTGATCTCCGAAACAACAGCTTAGGCCATGAAATTCCTCCAGAATTCAGCCGCCTGCACAGATTGCAACAACTACGGTTAAGCAACAATTCACTGAGTGGAGAAATTCCCACTAACTTGTCGCGTTGCCTTCAGCTCTTCGGGCTCGGTATTGGTTTCAATGTGCTGATGGGAAAGATTCCAAAGGAGCTTGGCCTTTTGTCAAAGTTAAGATTTTTTTCCATCCACTCTAACCACTTTACAGGGGGAATCCCTACTTCTTTTAGCAATTTATCATCCCTTGAATCGTTCTCGGCATATTCTAATAATTTGAGTGGCACTTTCCCGGATATTTTTGGCCGAATGACCAATCTTAGCCTTCTTGCTTTCAGTGAAAATAGCTTTTCGGGTATGCTTCCTCCCTCAATCTTTAATCTCTCTTCTCTCACACTCCTTTCTATGGATGTAAATGAAATCCAAGGGAGTCTGCCCTCAAACTTAGGCATGGTCTTTCCGAGTCTCCAAACATTTTCTATTTCCACTAACCAATTCAGTGGACCTATTCCTGTTTCATTATCTAATGCCTCAAATCTAATTGGATTGGGGATCGAAAGTAACCACCTGCATGGAAAAGTCCCTCCATTGACGAATTTGCATAAGCTTGAGTGGTTAATCCTTGATAAAAACCATCTCGGAAGTGGGGGAATTGATGACTTGACCTTTCTCTGCGATTTGACCAACGCCACCCATTTAGAAATTCTCGAAATGTTTATCAACAATTTTTGGGGCACGTTACCTCAGTGCATAGGAAACCTGTCTTCTTCTCTTCAAAGCTTCATTATAGCTCAAAATAAAATATTAGGAAGTATCCCGAATGAGATTGTAAATCTGGCTAACTTAGAGCTTTTGGGGATGGACGAGAACCAAATTTCAGGCACCATTCCAGAATTCTTAGAAGGTTTTGTATTTTTGGAATCTCTGAATCTATCTTATAACAATTTTGAGGGCATGTTGCCGATCAAAGGAGTGTTCAAGAATGCAACGGCGACATCAATCGAAGGAAATAGCAAGCTTTGTGGGGGCATACCTGAGTTTCATTTGCCAAAGTGCAAACTCCAGCATGCAAAAAAGAAAGGATTGAGCTTAACCATGAAATTGGTTCTCCCCCTCGTTTGTGGGATTCTTGGAGTCATTTTTGCACTAACCTTTTTGTACCTTTATTGCTCACGGAGGGACAAAAAGGGTCAAGCTGCAACTGATTCGGACAAATTTCCCCAGGTGTCTTACCAAAGTCTTCTAAAGGCAACAAATGGATTCTCCTCAACCAACTTGGTCGGTATGGGCAGTTTTGGGTCCGTTTATAAAGGAGTATTTGAGCAAGGTGAAACTACAGTTGCCATCAAGGTACTCAACCTCGTTCGTCGCGGAGCTTACAAAAGTTTTATTGCTGAGTGCAAGGCTTTCAGAAATATTAGACACCGTAATCTTGTCAAGGTACTCTCAGCATGTTCTGGTTTTGATTATCGCGGTCACGACTTCAAGGCCTTAATTTATGAGTTCATGGTTAACAGGAGCTTGGAGGAATGGCTGTATCCAATTCATACAATTGGTGAGACAAATGAGAGGCCAAGGAGCTTAACAATTTCTCAGAGGTTGAATATTGTTATTGATGTTGCTATGGCATTGGATTATCTCCATCATCATTGTGAGACGCCAATAGTTCATTGCGACCTCAAACCCAGCAATATTCTTCTCAATGAGGACATGGTTGCACATGTAGGTGACTTCGGGTTGGTGAGGTTCCTACCAAAAGCTGCTGAAAATTCTTCGGGAAATCAATCAAGCTCTTTAGGGATCAAGGGAACTATTGGTTATGCTCCTCCAGAATATGGCATGGGACATGAAGTGTGGACACAAGGTGATGTGTACAGCTTTGGCATCCTCCTGTTGGAAATATTTACAGGAAAAAGACCGACCGATGACATGTTTCAGGGAACTTCAAACCTTTATAGCTTTGTGAAGGCAGCTCTGCCTGAGCAGGTGGAAGAGGTTTTGGATCCCGTTCTTGTTCAAGAGAGCAATCATCCTAATGAAGGGAGGGCAAGGAATCGCATCCTAATCATAGAAAGTTTAATCTCTGTTTTAGAAATTGGTGTTGCTTGCTCAGCGGAGTTGCCTAGAGAAAGATTGAACATCTATGATGCTGTGGCACATATGTGTCAGATCAGAAACAAACTTCGAGCAAATGGTATATGCGAATAG

Protein Analysis

855

Amino Acids

94.34

Weight (kDa)

6.99

Isoelectric Point (pI)

37.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 37 - 75 4.4e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 86 - 287 5e-13 Leucine-rich repeat region
Pkinase PF00069 542 - 762 2.4e-34 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 544 - 766 9.6e-36 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1296, 1665
AarI CACCTGC 2 cut(s) 933, 2332
Acc36I ACCTGC 2 cut(s) 933, 2332
AccB1I GGYRCC 1 cut(s) 1238
AccB7I CCANNNNNTGG 1 cut(s) 2192
AccII CGCG 3 cut(s) 448, 1728, 1830
AciI CCGC 6 cut(s) 262, 293, 376, 1728, 1830, 2471
AclWI GGATC 5 cut(s) 289, 917, 2165, 2354, 2367
AcoI YGGCCR 1 cut(s) 661
AcsI RAATTY 9 cut(s) 357, 368, 429, 952, 1059, 1230, 1250, 1571, 2125
AcuI CTGAAG 1 cut(s) 440
AcyI GRCGYC 1 cut(s) 2015
AdeI CACNNNGTG 2 cut(s) 422, 2222
AfaI GTAC 4 cut(s) 1517, 1710, 1800, 2231
AfiI CCNNNNNNNGG 6 cut(s) 299, 763, 1325, 2192, 2251, 2396
AflIII ACRYGT 3 cut(s) 221, 2077, 2286
AjnI CCWGG 1 cut(s) 1578
AleI CACNNNNGTG 1 cut(s) 2518
Alw26I GTCTC 4 cut(s) 104, 827, 1910, 2006
AlwI GGATC 5 cut(s) 289, 917, 2165, 2354, 2367
AoxI GGCC 5 cut(s) 349, 517, 661, 1845, 1928
ApeKI GCWGC 3 cut(s) 1553, 2117, 2327
ApoI RAATTY 9 cut(s) 357, 368, 429, 952, 1059, 1230, 1250, 1571, 2125
AspS9I GGNCC 3 cut(s) 264, 860, 1656
AsuC2I CCSGG 2 cut(s) 102, 650
AsuHPI GGTGA 5 cut(s) 1697, 1925, 2096, 2110, 2234
AsuNHI GCTAGC 1 cut(s) 143
AvaII GGWCC 3 cut(s) 264, 860, 1656
BaeGI GKGCMC 1 cut(s) 1094
BamHI GGATCC 1 cut(s) 2359
BanI GGYRCC 1 cut(s) 1238
BanII GRGCYC 1 cut(s) 471
BbsI GAAGAC 2 cut(s) 1113, 1589
BbvI GCAGC 3 cut(s) 1540, 2104, 2339
BccI CCATC 7 cut(s) 200, 487, 554, 999, 1210, 1709, 2007
BceAI ACGGC 1 cut(s) 1362
BcgI CGANNNNNNTGC 2 cut(s) 1545, 1579
BciT130I CCWGG 1 cut(s) 1580
BciVI GTATCC 2 cut(s) 1181, 1905
BcnI CCSGG 2 cut(s) 102, 650
BcoDI GTCTC 4 cut(s) 104, 827, 1910, 2006
BfaI CTAG 2 cut(s) 144, 2481
BfmI CTRYAG 1 cut(s) 1692
BfuAI ACCTGC 2 cut(s) 933, 2332
BfuI GTATCC 2 cut(s) 1181, 1905
BisI GCNGC 5 cut(s) 293, 376, 1554, 2118, 2328
BlpI GCTNAGC 1 cut(s) 2467
BlsI GCNGC 5 cut(s) 294, 377, 1555, 2119, 2329
Bme1390I CCNGG 3 cut(s) 102, 650, 1580
Bme18I GGWCC 3 cut(s) 264, 860, 1656
BmgT120I GGNCC 3 cut(s) 264, 860, 1656
BmiI GGNNCC 4 cut(s) 1240, 1657, 2105, 2361
BmrFI CCNGG 3 cut(s) 102, 650, 1580
BmsI GCATC 3 cut(s) 2250, 2424, 2494
BmtI GCTAGC 1 cut(s) 147
BpiI GAAGAC 2 cut(s) 1113, 1589
BpmI CTGGAG 3 cut(s) 348, 1403, 2169
Bpu10I CCTNAGC 2 cut(s) 346, 2337
Bpu1102I GCTNAGC 1 cut(s) 2467
BpuEI CTTGAG 3 cut(s) 274, 328, 986
BpuMI CCSGG 2 cut(s) 102, 650
BsaHI GRCGYC 1 cut(s) 2015
BsaJI CCNNGG 3 cut(s) 781, 1578, 1931
Bsc4I CCNNNNNNNGG 6 cut(s) 299, 763, 1325, 2192, 2251, 2396
Bse3DI GCAATG 1 cut(s) 2026
BseBI CCWGG 1 cut(s) 1580
BseDI CCNNGG 3 cut(s) 781, 1578, 1931
BseLI CCNNNNNNNGG 6 cut(s) 299, 763, 1325, 2192, 2251, 2396
BseMI GCAATG 1 cut(s) 2026
BseMII CTCAG 8 cut(s) 410, 1115, 1383, 1743, 1818, 1964, 2328, 2481
BseRI GAGGAG 2 cut(s) 1612, 2172
BseSI GKGCMC 1 cut(s) 1094
BseXI GCAGC 3 cut(s) 1540, 2104, 2339
BseYI CCCAGC 1 cut(s) 2042
BsgI GTGCAG 1 cut(s) 365
Bsh1236I CGCG 3 cut(s) 448, 1728, 1830
Bsh1285I CGRYCG 1 cut(s) 2280
BshFI GGCC 5 cut(s) 351, 519, 663, 1847, 1930
BshNI GGYRCC 1 cut(s) 1238
BsiEI CGRYCG 1 cut(s) 2280
BsiSI CCGG 2 cut(s) 101, 650
BslFI GGGAC 3 cut(s) 923, 1550, 2214
BslI CCNNNNNNNGG 6 cut(s) 299, 763, 1325, 2192, 2251, 2396
BsmAI GTCTC 4 cut(s) 104, 827, 1910, 2006
BsmBI CGTCTC 1 cut(s) 2006
BsmFI GGGAC 3 cut(s) 923, 1550, 2214
BsmI GAATGC 1 cut(s) 1345
BsnI GGCC 5 cut(s) 351, 519, 663, 1847, 1930
Bsp1286I GDGCHC 2 cut(s) 471, 1094
Bsp1407I TGTACA 1 cut(s) 2229
Bsp143I GATC 7 cut(s) 281, 328, 909, 1320, 2157, 2359, 2526
Bsp1720I GCTNAGC 1 cut(s) 2467
BspACI CCGC 6 cut(s) 262, 293, 376, 1728, 1830, 2471
BspANI GGCC 5 cut(s) 351, 519, 663, 1847, 1930
BspCNI CTCAG 8 cut(s) 411, 1114, 1384, 1744, 1817, 1963, 2329, 2480
BspFNI CGCG 3 cut(s) 448, 1728, 1830
BspHI TCATGA 1 cut(s) 154
BspLI GGNNCC 4 cut(s) 1240, 1657, 2105, 2361
BspMI ACCTGC 2 cut(s) 933, 2332
BspOI GCTAGC 1 cut(s) 147
BspPI GGATC 5 cut(s) 289, 917, 2165, 2354, 2367
BspQI GCTCTTC 1 cut(s) 467
BspT107I GGYRCC 1 cut(s) 1238
BsrDI GCAATG 1 cut(s) 2026
BsrGI TGTACA 1 cut(s) 2229
BssECI CCNNGG 3 cut(s) 781, 1578, 1931
BssMI GATC 7 cut(s) 281, 328, 909, 1320, 2157, 2359, 2526
BssNI GRCGYC 1 cut(s) 2015
BssT1I CCWWGG 2 cut(s) 781, 1931
Bst2UI CCWGG 1 cut(s) 1580
Bst4CI ACNGT 3 cut(s) 402, 1696, 1784
Bst6I CTCTTC 4 cut(s) 467, 748, 1134, 2343
BstACI GRCGYC 1 cut(s) 2015
BstAPI GCANNNNNTGC 1 cut(s) 388
BstAUI TGTACA 1 cut(s) 2229
BstC8I GCNNGC 7 cut(s) 60, 145, 260, 380, 1373, 1425, 2464
BstENI CCTNNNNNAGG 1 cut(s) 2394
BstFNI CGCG 3 cut(s) 448, 1728, 1830
BstKTI GATC 7 cut(s) 284, 331, 912, 1323, 2160, 2362, 2529
BstMAI GTCTC 4 cut(s) 104, 827, 1910, 2006
BstMBI GATC 7 cut(s) 281, 328, 909, 1320, 2157, 2359, 2526
BstMCI CGRYCG 1 cut(s) 2280
BstMWI GCNNNNNNNGC 3 cut(s) 388, 466, 2468
BstNI CCWGG 1 cut(s) 1580
BstNSI RCATGY 8 cut(s) 62, 225, 299, 1315, 1427, 1812, 2081, 2290
BstSCI CCNGG 3 cut(s) 100, 648, 1578
BstSFI CTRYAG 1 cut(s) 1692
BstSLI GKGCMC 1 cut(s) 1094
BstUI CGCG 3 cut(s) 448, 1728, 1830
BstV1I GCAGC 3 cut(s) 1540, 2104, 2339
BstV2I GAAGAC 2 cut(s) 1113, 1589
BstX2I RGATCY 2 cut(s) 281, 2359
BstXI CCANNNNNNTGG 3 cut(s) 857, 929, 1459
BstYI RGATCY 2 cut(s) 281, 2359
BsuI GTATCC 2 cut(s) 1181, 1905
BsuRI GGCC 5 cut(s) 351, 519, 663, 1847, 1930
BtsIMutI CAGTG 4 cut(s) 416, 700, 862, 1109
BveI ACCTGC 2 cut(s) 933, 2332
Cac8I GCNNGC 7 cut(s) 60, 145, 260, 380, 1373, 1425, 2464
CciI TCATGA 1 cut(s) 154
Cfr13I GGNCC 3 cut(s) 264, 860, 1656
CseI GACGC 1 cut(s) 2023
Csp6I GTAC 4 cut(s) 1516, 1709, 1799, 2230
CspCI CAANNNNNGTGG 2 cut(s) 1360, 1395
CviQI GTAC 4 cut(s) 1516, 1709, 1799, 2230
DpnI GATC 7 cut(s) 283, 330, 911, 1322, 2159, 2361, 2528
DpnII GATC 7 cut(s) 281, 328, 909, 1320, 2157, 2359, 2526
DraI TTTAAA 1 cut(s) 166
DraIII CACNNNGTG 2 cut(s) 422, 2222
EaeI YGGCCR 1 cut(s) 661
Eam1104I CTCTTC 4 cut(s) 467, 748, 1134, 2343
EarI CTCTTC 4 cut(s) 467, 748, 1134, 2343
Eco130I CCWWGG 2 cut(s) 781, 1931
Eco147I AGGCCT 1 cut(s) 1847
Eco24I GRGCYC 1 cut(s) 471
Eco47I GGWCC 3 cut(s) 264, 860, 1656
Eco57I CTGAAG 1 cut(s) 440
EcoNI CCTNNNNNAGG 1 cut(s) 2394
EcoRI GAATTC 2 cut(s) 368, 1250
EcoRII CCWGG 1 cut(s) 1578
EcoT14I CCWWGG 2 cut(s) 781, 1931
EcoT22I ATGCAT 1 cut(s) 60
EcoT38I GRGCYC 1 cut(s) 471
ErhI CCWWGG 2 cut(s) 781, 1931
Esp3I CGTCTC 1 cut(s) 2006
FaqI GGGAC 3 cut(s) 923, 1550, 2214
FauNDI CATATG 1 cut(s) 2517
Fnu4HI GCNGC 5 cut(s) 293, 376, 1554, 2118, 2328
FriOI GRGCYC 1 cut(s) 471
Fsp4HI GCNGC 5 cut(s) 293, 376, 1554, 2118, 2328
FspBI CTAG 2 cut(s) 144, 2481
GluI GCNGC 5 cut(s) 293, 376, 1554, 2118, 2328
GsaI CCCAGC 1 cut(s) 2046
GsuI CTGGAG 3 cut(s) 348, 1403, 2169
HaeIII GGCC 5 cut(s) 351, 519, 663, 1847, 1930
HapII CCGG 2 cut(s) 101, 650
HgaI GACGC 1 cut(s) 2023
Hin1I GRCGYC 1 cut(s) 2015
HincII GTYRAC 1 cut(s) 1870
HindII GTYRAC 1 cut(s) 1870
HindIII AAGCTT 4 cut(s) 250, 962, 1135, 1373
HpaI GTTAAC 1 cut(s) 1870
HpaII CCGG 2 cut(s) 101, 650
HphI GGTGA 5 cut(s) 1697, 1925, 2096, 2110, 2234
Hpy166II GTNNAC 4 cut(s) 860, 1870, 2214, 2230
Hpy188I TCNGA 9 cut(s) 335, 819, 998, 1284, 1567, 1769, 1953, 2526, 2531
Hpy8I GTNNAC 4 cut(s) 860, 1870, 2214, 2230
Hpy99I CGWCG 2 cut(s) 234, 1728
HpyAV CCTTC 8 cut(s) 92, 107, 464, 692, 1253, 1355, 2317, 2390
HpyCH4III ACNGT 3 cut(s) 402, 1696, 1784
HpyCH4IV ACGT 1 cut(s) 1094
HpyF10VI GCNNNNNNNGC 3 cut(s) 388, 466, 2468
HpySE526I ACGT 1 cut(s) 1094
Hsp92I GRCGYC 1 cut(s) 2015
KspAI GTTAAC 1 cut(s) 1870
Kzo9I GATC 7 cut(s) 281, 328, 909, 1320, 2157, 2359, 2526
LguI GCTCTTC 1 cut(s) 467
LmnI GCTCC 5 cut(s) 511, 1730, 1875, 1935, 2185
Lsp1109I GCAGC 3 cut(s) 1540, 2104, 2339
LweI GCATC 3 cut(s) 2250, 2424, 2494
MaeI CTAG 2 cut(s) 144, 2481
MaeII ACGT 1 cut(s) 1094
MaeIII GTNAC 6 cut(s) 217, 244, 917, 1095, 1832, 2084
MalI GATC 7 cut(s) 283, 330, 911, 1322, 2159, 2361, 2528
MboI GATC 7 cut(s) 281, 328, 909, 1320, 2157, 2359, 2526
MboII GAAGA 9 cut(s) 454, 735, 1113, 1116, 1121, 1589, 2045, 2121, 2360
MfeI CAATTG 1 cut(s) 1908
MflI RGATCY 2 cut(s) 281, 2359
MhlI GDGCHC 2 cut(s) 471, 1094
MlyI GAGTC 5 cut(s) 114, 330, 796, 829, 1500
MmeI TCCRAC 1 cut(s) 2232
Mph1103I ATGCAT 1 cut(s) 60
MslI CAYNNNNRTG 5 cut(s) 927, 2007, 2082, 2391, 2518
MspA1I CMGCKG 1 cut(s) 2471
MspI CCGG 2 cut(s) 101, 650
MspR9I CCNGG 3 cut(s) 102, 650, 1580
MunI CAATTG 1 cut(s) 1908
Mva1269I GAATGC 1 cut(s) 1345
MvaI CCWGG 1 cut(s) 1580
MvnI CGCG 3 cut(s) 448, 1728, 1830
MwoI GCNNNNNNNGC 3 cut(s) 388, 466, 2468
NciI CCSGG 2 cut(s) 102, 650
NdeI CATATG 1 cut(s) 2517
NdeII GATC 7 cut(s) 281, 328, 909, 1320, 2157, 2359, 2526
NheI GCTAGC 1 cut(s) 143
NlaIV GGNNCC 4 cut(s) 1240, 1657, 2105, 2361
NmeAIII GCCGAG 1 cut(s) 596
NmuCI GTSAC 3 cut(s) 244, 1832, 2084
NsiI ATGCAT 1 cut(s) 60
NspI RCATGY 8 cut(s) 62, 225, 299, 1315, 1427, 1812, 2081, 2290
OliI CACNNNNGTG 1 cut(s) 2518
PaeI GCATGC 2 cut(s) 62, 1427
PagI TCATGA 1 cut(s) 154
PaqCI CACCTGC 2 cut(s) 933, 2332
PceI AGGCCT 1 cut(s) 1847
PciI ACATGT 3 cut(s) 221, 2077, 2286
PciSI GCTCTTC 1 cut(s) 467
PctI GAATGC 1 cut(s) 1345
PfeI GAWTC 9 cut(s) 502, 573, 608, 1277, 1285, 1483, 1562, 1617, 2410
PflMI CCANNNNNTGG 1 cut(s) 2192
PfoI TCCNGGA 2 cut(s) 100, 648
PkrI GCNGC 5 cut(s) 294, 377, 1555, 2119, 2329
PleI GAGTC 5 cut(s) 114, 329, 795, 828, 1499
PpsI GAGTC 5 cut(s) 114, 329, 795, 828, 1499
PscI ACATGT 3 cut(s) 221, 2077, 2286
PsiI TTATAA 2 cut(s) 1296, 1665
Psp6I CCWGG 1 cut(s) 1578
PspFI CCCAGC 1 cut(s) 2042
PspGI CCWGG 1 cut(s) 1578
PspN4I GGNNCC 4 cut(s) 1240, 1657, 2105, 2361
PspPI GGNCC 3 cut(s) 264, 860, 1656
PsuI RGATCY 2 cut(s) 281, 2359
RsaI GTAC 4 cut(s) 1517, 1710, 1800, 2231
RsaNI GTAC 4 cut(s) 1516, 1709, 1799, 2230
RseI CAYNNNNRTG 5 cut(s) 927, 2007, 2082, 2391, 2518
SapI GCTCTTC 1 cut(s) 467
SatI GCNGC 5 cut(s) 293, 376, 1554, 2118, 2328
Sau3AI GATC 7 cut(s) 281, 328, 909, 1320, 2157, 2359, 2526
Sau96I GGNCC 3 cut(s) 264, 860, 1656
SchI GAGTC 5 cut(s) 114, 330, 796, 829, 1500
ScrFI CCNGG 3 cut(s) 102, 650, 1580
SduI GDGCHC 2 cut(s) 471, 1094
SfaNI GCATC 3 cut(s) 2250, 2424, 2494
SfcI CTRYAG 1 cut(s) 1692
SinI GGWCC 3 cut(s) 264, 860, 1656
SmiMI CAYNNNNRTG 5 cut(s) 927, 2007, 2082, 2391, 2518
SmlI CTYRAG 3 cut(s) 253, 307, 965
SmoI CTYRAG 3 cut(s) 253, 307, 965
SphI GCATGC 2 cut(s) 62, 1427
SseBI AGGCCT 1 cut(s) 1847
SsiI CCGC 6 cut(s) 262, 293, 376, 1728, 1830, 2471
SspI AATATT 5 cut(s) 1161, 1774, 1963, 2050, 2259
SspMI CTAG 2 cut(s) 144, 2481
StuI AGGCCT 1 cut(s) 1847
StyD4I CCNGG 3 cut(s) 100, 648, 1578
StyI CCWWGG 2 cut(s) 781, 1931
TaaI ACNGT 3 cut(s) 402, 1696, 1784
TaiI ACGT 1 cut(s) 1097
TaqI TCGA 4 cut(s) 912, 1065, 1359, 2542
TaqII GACCGA 2 cut(s) 2290, 2294
TatI WGTACW 1 cut(s) 2229
TauI GCSGC 2 cut(s) 295, 378
TfiI GAWTC 9 cut(s) 502, 573, 608, 1277, 1285, 1483, 1562, 1617, 2410
TscAI CASTG 4 cut(s) 423, 700, 862, 1109
TseFI GTSAC 3 cut(s) 244, 1832, 2084
TseI GCWGC 3 cut(s) 1553, 2117, 2327
Tsp45I GTSAC 3 cut(s) 244, 1832, 2084
TspGWI ACGGA 2 cut(s) 1546, 1648
TspRI CASTG 4 cut(s) 423, 700, 862, 1109
Van91I CCANNNNNTGG 1 cut(s) 2192
VpaK11BI GGWCC 3 cut(s) 264, 860, 1656
XagI CCTNNNNNAGG 1 cut(s) 2394
XapI RAATTY 9 cut(s) 357, 368, 429, 952, 1059, 1230, 1250, 1571, 2125
XceI RCATGY 8 cut(s) 62, 225, 299, 1315, 1427, 1812, 2081, 2290
XcmI CCANNNNNNNNNTGG 1 cut(s) 998
XspI CTAG 2 cut(s) 144, 2481
Zsp2I ATGCAT 1 cut(s) 60
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.