FvH4_3g24240
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
17226798 .. 17228313
1516 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g24240.t1

Sequence Viewer

Length: 1434 bp
ATGACTCTTCTTCAAGCAAATTCTAAGAACATGCGGGTTTTGGCAGTGAAAGTGATGATCATAATAGTATGTTGTCTTTCTGATGCAATTCCGGTTTGCTGTCTTAGCTCCTCCATGCATTTGAGCCAACCCTTCACCACTAGGCTGAAAGGAAACGAGACTGATAGGCTGGCACTCTTAGCCATCAAAGGCAACATTCAGCATGATCCCAACCACGTCCTGAGCTCCTGGAATAACTCCATTCACCTTCTGCTTCTGGCATGGTGTGACTTGCAGTACAAGGCATCGTCAGAGATTTACCTATATAACAATAGCTTCACTCAAGAAATTCCTCCAGAAATTGGGCATTTGCGTAGGTTACAGGTACAATCTCTAAGGAATAACTCATTTACTGGCCCTATTCCTGTCAACATATCCGGTTGCGTCAAACTCACATATCTCTCTTTTGGTTACAATAATATGGTGGGTGAAATTCCTTCCAATCTTGGTTTCTTGTCTAAGCTTCAAATACTTGTTTTAGAACTTAATAATTTAACGGGAGAAATCCCTCCTTCCTTGGGAAATCTTTCATCTCTTACAGAACTTGGTGCATCTACTAACAACTTGGTGGGGAGCATCCCTAGTTCTCTAGGCCAATTGAAAATGTTAACCTTTTTTTCGTTGGACGTAAATAACTTGTCTGGTACCATCCCTCCCTCCATCTACAACCTCTCTGCTATTGTCGCTTTTTCTGTGGCTGGAAACCAGATTCAGGGGAGCATTCCCTCACACTTGAGCACTGCATTTCCTCACCTTGAGGACTTTTACATATGGGGGAATGAATTTACCGGGTCCATTCCTTTGTCGATATCCTCTGCAACAAGTCTAGTTGATTTCGATGTTTCACTCAACAGTCTAACAGGACAAGTGCCCAATCTGCGAAAGCTTCATAACCTCTCATATTTCAATGTCCCGTTCAACCATCTTGGAAGTGGTCAACAAGGTGACTTGAGCTTTGTCTCTGATTTGACGAATGCTACACAGTTAAGAAGGTTGGATTTAGGGTCAAACAATTTCGGAGGGACGTTGCCCACATCAATATCAAATCTCTCAACCGGTCTTGAGGAGATCTGGGTTGGTGTAACTGGTTTAGGAAATCTTGCGAATCTGCAATCACTCGTTTTGAGTGTAAACTTCTTCACCGGTAGCATCCCGGCTGACATTGGGCAGCTTTCATCGCTTGTGGTATTGGATCTTCATTCCAACCAATTATCTGGACGCATTCCATTTTCTCTTGGAAATTTAACTATGTTAATCTATCTTTACTTGGACACAAATAATCTTAGTGGCACTGGCAGCATCGCTTCGAGTCTAGGAAAATGCCACGGGTTGTTGGAATTGGATATTTCTCAAAATAACCTCAACGGGATTATGGCTGCATTTGGTGCAGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

478

Amino Acids

51.27

Weight (kDa)

5.72

Isoelectric Point (pI)

32.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 107 - 196 5.2e-06 Leucine-rich repeat region
LRR_14 PF23598 135 - 316 3.9e-08 Leucine-rich repeat region
LRR_14 PF23598 375 - 441 1.3e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 683
AccB1I GGYRCC 1 cut(s) 683
AccB7I CCANNNNNTGG 1 cut(s) 341
AciI CCGC 1 cut(s) 34
AclWI GGATC 2 cut(s) 200, 1239
AcsI RAATTY 5 cut(s) 19, 327, 471, 821, 1279
AfaI GTAC 3 cut(s) 278, 366, 685
AfiI CCNNNNNNNGG 3 cut(s) 341, 557, 751
AgeI ACCGGT 2 cut(s) 1094, 1181
AgsI TTSAA 5 cut(s) 14, 506, 640, 946, 958
AjiI CACGTC 1 cut(s) 217
AjnI CCWGG 1 cut(s) 227
AjuI GAANNNNNNNTTGG 2 cut(s) 473, 505
AluBI AGCT 8 cut(s) 108, 225, 315, 502, 925, 993, 1210, 1430
AluI AGCT 8 cut(s) 108, 225, 315, 502, 925, 993, 1210, 1430
Alw21I GWGCWC 2 cut(s) 227, 779
Alw26I GTCTC 2 cut(s) 152, 1003
AlwI GGATC 2 cut(s) 200, 1239
AoxI GGCC 2 cut(s) 394, 631
ApeKI GCWGC 4 cut(s) 1207, 1335, 1415, 1427
ApoI RAATTY 5 cut(s) 19, 327, 471, 821, 1279
ArsI GACNNNNNNTTYG 2 cut(s) 977, 1009
AsiGI ACCGGT 2 cut(s) 1094, 1181
Asp700I GAANNNNTTC 1 cut(s) 565
Asp718I GGTACC 1 cut(s) 683
AspS9I GGNCC 2 cut(s) 395, 831
AsuC2I CCSGG 2 cut(s) 829, 1193
AsuHPI GGTGA 6 cut(s) 127, 236, 479, 782, 995, 1171
AvaII GGWCC 1 cut(s) 831
BaeGI GKGCMC 1 cut(s) 912
BanI GGYRCC 1 cut(s) 683
BanII GRGCYC 1 cut(s) 227
BarI GAAGNNNNNNTAC 2 cut(s) 1218, 1250
Bbv12I GWGCWC 2 cut(s) 227, 779
BbvI GCAGC 3 cut(s) 1219, 1347, 1402
BccI CCATC 4 cut(s) 191, 695, 707, 969
BciT130I CCWGG 1 cut(s) 229
BclI TGATCA 1 cut(s) 57
BcnI CCSGG 2 cut(s) 829, 1193
BcoDI GTCTC 2 cut(s) 152, 1003
BfaI CTAG 5 cut(s) 141, 621, 629, 866, 1352
BglII AGATCT 1 cut(s) 1107
BisI GCNGC 4 cut(s) 1208, 1336, 1416, 1428
BlsI GCNGC 4 cut(s) 1209, 1337, 1417, 1429
Bme1390I CCNGG 3 cut(s) 229, 829, 1193
Bme18I GGWCC 1 cut(s) 831
BmgBI CACGTC 1 cut(s) 217
BmgT120I GGNCC 2 cut(s) 395, 831
BmiI GGNNCC 2 cut(s) 685, 832
BmrFI CCNGG 3 cut(s) 229, 829, 1193
BmsI GCATC 6 cut(s) 73, 293, 599, 624, 1197, 1347
BpmI CTGGAG 1 cut(s) 318
Bpu10I CCTNAGC 1 cut(s) 221
BpuEI CTTGAG 5 cut(s) 306, 793, 815, 1009, 1121
BpuMI CCSGG 2 cut(s) 829, 1193
BsaJI CCNNGG 2 cut(s) 555, 1363
BsaWI WCCGGW 4 cut(s) 91, 416, 1094, 1181
BsaXI ACNNNNNCTCC 2 cut(s) 676, 706
Bsc4I CCNNNNNNNGG 3 cut(s) 341, 557, 751
Bse118I RCCGGY 2 cut(s) 1094, 1181
Bse1I ACTGG 3 cut(s) 397, 1129, 1336
BseBI CCWGG 1 cut(s) 229
BseDI CCNNGG 2 cut(s) 555, 1363
BseGI GGATG 3 cut(s) 615, 687, 1188
BseLI CCNNNNNNNGG 3 cut(s) 341, 557, 751
BseMII CTCAG 1 cut(s) 212
BseNI ACTGG 3 cut(s) 397, 1129, 1336
BseRI GAGGAG 2 cut(s) 100, 1118
BseSI GKGCMC 1 cut(s) 912
BseXI GCAGC 3 cut(s) 1219, 1347, 1402
BshFI GGCC 2 cut(s) 396, 633
BshNI GGYRCC 1 cut(s) 683
BshTI ACCGGT 2 cut(s) 1094, 1181
BsiHKAI GWGCWC 2 cut(s) 227, 779
BsiSI CCGG 6 cut(s) 92, 417, 828, 1095, 1182, 1193
BslFI GGGAC 2 cut(s) 935, 1075
BslI CCNNNNNNNGG 3 cut(s) 341, 557, 751
BsmAI GTCTC 2 cut(s) 152, 1003
BsmFI GGGAC 2 cut(s) 935, 1075
BsmI GAATGC 3 cut(s) 759, 1018, 1260
BsnI GGCC 2 cut(s) 396, 633
Bsp1286I GDGCHC 3 cut(s) 227, 779, 912
Bsp143I GATC 4 cut(s) 57, 205, 1107, 1231
BspACI CCGC 1 cut(s) 34
BspANI GGCC 2 cut(s) 396, 633
BspCNI CTCAG 1 cut(s) 213
BspLI GGNNCC 2 cut(s) 685, 832
BspPI GGATC 2 cut(s) 200, 1239
BspT107I GGYRCC 1 cut(s) 683
BsrFI RCCGGY 2 cut(s) 1094, 1181
BsrI ACTGG 3 cut(s) 397, 1129, 1336
BssAI RCCGGY 2 cut(s) 1094, 1181
BssECI CCNNGG 2 cut(s) 555, 1363
BssMI GATC 4 cut(s) 57, 205, 1107, 1231
BssT1I CCWWGG 1 cut(s) 555
Bst2UI CCWGG 1 cut(s) 229
Bst4CI ACNGT 2 cut(s) 893, 1023
Bst6I CTCTTC 1 cut(s) 12
BstAPI GCANNNNNTGC 1 cut(s) 1424
BstC8I GCNNGC 1 cut(s) 171
BstDEI CTNAG 7 cut(s) 24, 104, 178, 221, 374, 498, 1322
BstDSI CCRYGG 1 cut(s) 1363
BstF5I GGATG 3 cut(s) 615, 687, 1188
BstKTI GATC 4 cut(s) 60, 208, 1110, 1234
BstMAI GTCTC 2 cut(s) 152, 1003
BstMBI GATC 4 cut(s) 57, 205, 1107, 1231
BstMWI GCNNNNNNNGC 7 cut(s) 105, 179, 722, 916, 1216, 1335, 1424
BstNI CCWGG 1 cut(s) 229
BstNSI RCATGY 1 cut(s) 34
BstSCI CCNGG 3 cut(s) 227, 827, 1191
BstSLI GKGCMC 1 cut(s) 912
BstV1I GCAGC 3 cut(s) 1219, 1347, 1402
BstX2I RGATCY 2 cut(s) 1107, 1231
BstXI CCANNNNNNTGG 1 cut(s) 1253
BstYI RGATCY 2 cut(s) 1107, 1231
BsuRI GGCC 2 cut(s) 396, 633
BtgI CCRYGG 1 cut(s) 1363
BtgZI GCGATG 2 cut(s) 1200, 1324
BtrI CACGTC 1 cut(s) 217
BtsCI GGATG 3 cut(s) 615, 687, 1188
BtsI GCAGTG 2 cut(s) 51, 777
BtsIMutI CAGTG 3 cut(s) 51, 777, 1329
Cac8I GCNNGC 1 cut(s) 171
Cfr10I RCCGGY 2 cut(s) 1094, 1181
Cfr13I GGNCC 2 cut(s) 395, 831
CseI GACGC 2 cut(s) 412, 1266
Csp6I GTAC 3 cut(s) 277, 365, 684
CspAI ACCGGT 2 cut(s) 1094, 1181
CviAII CATG 4 cut(s) 31, 115, 203, 261
CviQI GTAC 3 cut(s) 277, 365, 684
DdeI CTNAG 7 cut(s) 24, 104, 178, 221, 374, 498, 1322
DpnI GATC 4 cut(s) 59, 207, 1109, 1233
DpnII GATC 4 cut(s) 57, 205, 1107, 1231
Eam1104I CTCTTC 1 cut(s) 12
EarI CTCTTC 1 cut(s) 12
Ecl136II GAGCTC 1 cut(s) 225
Eco130I CCWWGG 1 cut(s) 555
Eco24I GRGCYC 1 cut(s) 227
Eco32I GATATC 1 cut(s) 849
Eco47I GGWCC 1 cut(s) 831
Eco53kI GAGCTC 1 cut(s) 225
EcoICRI GAGCTC 1 cut(s) 225
EcoRII CCWGG 1 cut(s) 227
EcoRV GATATC 1 cut(s) 849
EcoT14I CCWWGG 1 cut(s) 555
EcoT22I ATGCAT 1 cut(s) 120
EcoT38I GRGCYC 1 cut(s) 227
ErhI CCWWGG 1 cut(s) 555
FaeI CATG 4 cut(s) 34, 118, 206, 264
FaqI GGGAC 2 cut(s) 935, 1075
FatI CATG 4 cut(s) 30, 114, 202, 260
FauI CCCGC 1 cut(s) 27
FauNDI CATATG 1 cut(s) 809
FbaI TGATCA 1 cut(s) 57
Fnu4HI GCNGC 4 cut(s) 1208, 1336, 1416, 1428
FokI GGATG 3 cut(s) 602, 674, 1175
FriOI GRGCYC 1 cut(s) 227
Fsp4HI GCNGC 4 cut(s) 1208, 1336, 1416, 1428
FspBI CTAG 5 cut(s) 141, 621, 629, 866, 1352
GluI GCNGC 4 cut(s) 1208, 1336, 1416, 1428
GsuI CTGGAG 1 cut(s) 318
HaeIII GGCC 2 cut(s) 396, 633
HapII CCGG 6 cut(s) 92, 417, 828, 1095, 1182, 1193
HgaI GACGC 2 cut(s) 412, 1266
Hin1II CATG 4 cut(s) 34, 118, 206, 264
HincII GTYRAC 3 cut(s) 409, 648, 977
HindII GTYRAC 3 cut(s) 409, 648, 977
HindIII AAGCTT 2 cut(s) 500, 923
HinfI GANTC 4 cut(s) 4, 748, 1144, 1348
HpaI GTTAAC 1 cut(s) 648
HpaII CCGG 6 cut(s) 92, 417, 828, 1095, 1182, 1193
HphI GGTGA 6 cut(s) 127, 236, 479, 782, 995, 1171
Hpy166II GTNNAC 4 cut(s) 409, 648, 977, 1171
Hpy188I TCNGA 4 cut(s) 82, 292, 1003, 1058
Hpy188III TCNNGA 5 cut(s) 220, 323, 335, 1100, 1254
Hpy8I GTNNAC 4 cut(s) 409, 648, 977, 1171
HpyAV CCTTC 5 cut(s) 142, 257, 486, 561, 1023
HpyCH4III ACNGT 2 cut(s) 893, 1023
HpyCH4IV ACGT 3 cut(s) 216, 666, 1064
HpyCH4V TGCA 9 cut(s) 86, 118, 274, 590, 782, 857, 1150, 1418, 1427
HpyF10VI GCNNNNNNNGC 7 cut(s) 105, 179, 722, 916, 1216, 1335, 1424
HpyF3I CTNAG 7 cut(s) 24, 104, 178, 221, 374, 498, 1322
HpySE526I ACGT 3 cut(s) 216, 666, 1064
Hsp92II CATG 4 cut(s) 34, 118, 206, 264
KpnI GGTACC 1 cut(s) 687
Ksp22I TGATCA 1 cut(s) 57
KspAI GTTAAC 1 cut(s) 648
Kzo9I GATC 4 cut(s) 57, 205, 1107, 1231
LmnI GCTCC 4 cut(s) 113, 230, 612, 756
Lsp1109I GCAGC 3 cut(s) 1219, 1347, 1402
LweI GCATC 6 cut(s) 73, 293, 599, 624, 1197, 1347
MaeI CTAG 5 cut(s) 141, 621, 629, 866, 1352
MaeII ACGT 3 cut(s) 216, 666, 1064
MaeIII GTNAC 5 cut(s) 266, 357, 449, 983, 1120
MalI GATC 4 cut(s) 59, 207, 1109, 1233
MboI GATC 4 cut(s) 57, 205, 1107, 1231
MboII GAAGA 2 cut(s) 1168, 1226
MfeI CAATTG 1 cut(s) 635
MflI RGATCY 2 cut(s) 1107, 1231
MhlI GDGCHC 3 cut(s) 227, 779, 912
MlyI GAGTC 1 cut(s) 1357
MmeI TCCRAC 4 cut(s) 642, 1014, 1266, 1353
Mph1103I ATGCAT 1 cut(s) 120
MroXI GAANNNNTTC 1 cut(s) 565
MseI TTAA 7 cut(s) 525, 533, 647, 1025, 1283, 1292, 1432
MspI CCGG 6 cut(s) 92, 417, 828, 1095, 1182, 1193
MspR9I CCNGG 3 cut(s) 229, 829, 1193
MunI CAATTG 1 cut(s) 635
Mva1269I GAATGC 3 cut(s) 759, 1018, 1260
MvaI CCWGG 1 cut(s) 229
MwoI GCNNNNNNNGC 7 cut(s) 105, 179, 722, 916, 1216, 1335, 1424
NciI CCSGG 2 cut(s) 829, 1193
NdeI CATATG 1 cut(s) 809
NdeII GATC 4 cut(s) 57, 205, 1107, 1231
NlaIII CATG 4 cut(s) 34, 118, 206, 264
NlaIV GGNNCC 2 cut(s) 685, 832
NmuCI GTSAC 2 cut(s) 266, 983
NsiI ATGCAT 1 cut(s) 120
NspI RCATGY 1 cut(s) 34
PctI GAATGC 3 cut(s) 759, 1018, 1260
PdmI GAANNNNTTC 1 cut(s) 565
PfeI GAWTC 2 cut(s) 748, 1144
PflMI CCANNNNNTGG 1 cut(s) 341
PfoI TCCNGGA 1 cut(s) 227
PinAI ACCGGT 2 cut(s) 1094, 1181
PkrI GCNGC 4 cut(s) 1209, 1337, 1417, 1429
PleI GAGTC 1 cut(s) 1356
PpsI GAGTC 1 cut(s) 1356
Psp124BI GAGCTC 1 cut(s) 227
Psp6I CCWGG 1 cut(s) 227
PspGI CCWGG 1 cut(s) 227
PspN4I GGNNCC 2 cut(s) 685, 832
PspPI GGNCC 2 cut(s) 395, 831
PsuI RGATCY 2 cut(s) 1107, 1231
RsaI GTAC 3 cut(s) 278, 366, 685
RsaNI GTAC 3 cut(s) 277, 365, 684
SacI GAGCTC 1 cut(s) 227
SaqAI TTAA 7 cut(s) 525, 533, 647, 1025, 1283, 1292, 1432
SatI GCNGC 4 cut(s) 1208, 1336, 1416, 1428
Sau3AI GATC 4 cut(s) 57, 205, 1107, 1231
Sau96I GGNCC 2 cut(s) 395, 831
SchI GAGTC 1 cut(s) 1357
ScrFI CCNGG 3 cut(s) 229, 829, 1193
SduI GDGCHC 3 cut(s) 227, 779, 912
SfaNI GCATC 6 cut(s) 73, 293, 599, 624, 1197, 1347
SinI GGWCC 1 cut(s) 831
SmlI CTYRAG 5 cut(s) 321, 772, 794, 988, 1100
SmoI CTYRAG 5 cut(s) 321, 772, 794, 988, 1100
SsiI CCGC 1 cut(s) 34
SspMI CTAG 5 cut(s) 141, 621, 629, 866, 1352
SstI GAGCTC 1 cut(s) 227
StyD4I CCNGG 3 cut(s) 227, 827, 1191
StyI CCWWGG 1 cut(s) 555
TaaI ACNGT 2 cut(s) 893, 1023
TaiI ACGT 3 cut(s) 219, 669, 1067
TaqI TCGA 3 cut(s) 845, 876, 1346
TatI WGTACW 1 cut(s) 276
TfiI GAWTC 2 cut(s) 748, 1144
Tru1I TTAA 7 cut(s) 525, 533, 647, 1025, 1283, 1292, 1432
Tru9I TTAA 7 cut(s) 525, 533, 647, 1025, 1283, 1292, 1432
TscAI CASTG 3 cut(s) 51, 784, 1336
TseFI GTSAC 2 cut(s) 266, 983
TseI GCWGC 4 cut(s) 1207, 1335, 1415, 1427
Tsp45I GTSAC 2 cut(s) 266, 983
TspDTI ATGAA 5 cut(s) 558, 834, 917, 1203, 1226
TspRI CASTG 3 cut(s) 51, 784, 1336
Van91I CCANNNNNTGG 1 cut(s) 341
VpaK11BI GGWCC 1 cut(s) 831
XapI RAATTY 5 cut(s) 19, 327, 471, 821, 1279
XceI RCATGY 1 cut(s) 34
XcmI CCANNNNNNNNNTGG 1 cut(s) 968
XmnI GAANNNNTTC 1 cut(s) 565
XspI CTAG 5 cut(s) 141, 621, 629, 866, 1352
Zsp2I ATGCAT 1 cut(s) 120
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.