MD00G1178900.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Forward (+)
42041386 .. 42044736
3351 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1178900.v1.1.491

Sequence Viewer

Length: 3087 bp
ATGGGGGTTTTGGTTGTGAAATTGATCTTAATATACTTGCTTTTCAGTGCAGTGTTCATTTGCTGTAGGAGCTCCCTGCAATCGGGACTCGGAGGGAATGCGACGGATAGGCTGGCGCTGCTAGCCATCAAAGCTCAAATAAAGCAAGATCTCCATAATTACAACGTGATGAGCTCCTGGAACGAATCCACGCACTTTTGCATGTGGCATGGTGTGACGTGCAGTCGACAACATCGCCAAAGGGTCACTAAACTGGACCTGCAATCTCAAAATCTGGTAGGGAAACTATCCCCAAACATTGGAAATCTAAGTTTTCTAAGGGAGCTGTGGCTTTCAAACAACAGCTTCAGTCATGAAATTCCACCACAAATTGGGAGTTTGCGTAGATTGCAGGTATTGCAATTAGACGTTAACTCGTTTAGTGGCAGTATTCCACACAATATATCATATTGCTTCAACCTTATCTTTGTGAATTTCACTTACAACAAGTTGGTGGGTAAAATTCCTTCAGAAGTTGGATTGCTGTCGAAGCTGCAAGAATTTACATTAGAATATAATAATGTAACGGGACAGGTCCCTCCTTCCTTGGGGAACCTTTCGTCTCTCCAGGGACCGGGTCTTCTCAATAATAGCTTGATGGGAAACATCCCCAGTTCTCTTGGCCAATTGAAAAAATTAACCTTCTTGGGATTGGGGTTAAATCAGTTGTCTGGTAGCATCCCTTCCTCCATTTATAACCTCTCTTCTCTTGTTACATTTTCCATAGAAGGTAACCAAATTCAAGGGAGTATTCCATCAGATATTGGCAAAAATCTTCCTAATCTCGAAATCTTCAGCGTCTTCTCAAACCAATTCACTGGGTCCATACCTCCCTCGTTATTCAATGTCACAAGTGTTGAGTCATTTGAAGTTGGGAGTAACAACCTAATTGGACAGGTACCGAGTCTCCAAAAGCTTCACAACCTTCTGCTTTTCAACATTCAATTTAATAATATTGGAAGCGGTAAAGATGGTGACTTAAGTTTTCTCTCGGACTTGACCAATGCCACCCAGTTACAATGGTTGATTATTAGCAACAACAATTTTGGAGGGACATTGCCCGTGTCAATATCCAATCTCTCAACCAAACTTGAAAGGTTTTGGGTTCAACATAACCAAATATATGGAAGCATCCCATCTGGGATAGGGAATCTGGTGAGCTTGGAATCGTTGCTTTTGGGGAATAATAGCTTCACAGGTAACATCCCCTCTGACATGGGTAAGCTTTCCAACCTTGGAGCATTAGAAATTTTCACAAACAATTTATCAGGAAATATTCCGTCTTCCGTAAGAAATTTAACCAAGTTATACCATCTTGATTTGGATGTAAATTATCTTGAGGGCAGCATTCCTTCAGGTCTCGGGGAATGCCATGGGTTGCAAGCGTTGTATCTTTCTGATAACCTTCTTAATGGCACAATACCCAAACAAGTTTTTAGACTCTCCTCCTTATCAATTTCTTTGAACTTGTCGAATAACCTCTTCACAGGTTCCCTTCCCTCGGAGGTTGGGAATTTACAAAGTCTAAGTGAATTGGACGTTTCTGATAACATGTTATCTGGAGAACTCCCCAGTAGCCTTGGTGGTTGTGAGAGTTTAGAAGTCCTGCATTTGCAAGGAAACTTCTTCAACGGGTCCATTCCTTTGTCTATGAGTTCAGTGAGAGGGATTCAAGATCTAGACCTTTCTCGCAATAATTTTTTAGGTGAAATTCCAAAATTTTTAGAAGGTTTTAGAACCCTGAATAATCTGAACTTATCATTCAATCAATTTTGGGGAGTGGTACCAACTGGAGGTGTTTTCAAAAATGCGAGTGCTATTTCAGTTGTTGGCAACACTAATCTGTGCAGCCCTGTTGCTAATTTAAAACTTCCCAAGTGCAAGTCTAAAGAGACCAAGAAACGAAGATTGTCTCGTAGCTTGAAACTAATACTCCCTTTAGTATTTGGACTTACTCTTCTAGGAATAGCCATGGTGTTCTCCTATTTCTTTCTTTGTTCGTCAAGGAAGAAAAGGAAAGAAATTTCATTGAGCACTTTGGGGAACACTATTTTTCAAGTGTCATATGCTACTCTACTCAAAGCTACTGACGGGTTCTCAGAGGCTAATTTAATTGGTGCTGGTAGTTTTGGGTCTGTGTACAAGGGAGTTCTTGATGAGGATGATAAAGCTCAACTTGTTGCCGTGAAGGTGTTTAACTTGTTATGCCATGGAGCTTCGAGGAGTTTCATAGCCGAATGTGAAGCTTTGAGAAATATTAGGCACCGAAATCTCGTCAAGACTATAACCGTGTGTTCAAGTGTTGATTTTCATGGTAATGATTTCAAGGCTCTAGTTTATGAGTTCATGGACAACGGGAGCTTAGAGGAGTGGCTGCATCCACCTACTGGAACTGAAGAGTTGAGAGATCATGTACCCAAGAAGTTAAGTCTTCTTCAGAGGCTAGAAATTGCCATTGGTGTTGCTTGTGCACTAGATTATCTTCATAATCATTGTGAAACGCCAATAGTTCATTGTGATCTCAAGCCAAGCAACGTTCTCTTGGACAACGAACTGACTGGCCATGTTTCTGACTTTGGAATAGCAAGGTTTCTCTCACAAGTAACGAGTAATGTTTCAGCAATTCAAAGTCAGACAAGTTCCGCTGGAATAAGAGGAACGGTTGGTTATGCAGCTCCAGAGTATGGCATGGGGAGTGAGGTGTCAACGAATGGTGATGTCTACAGCTTTGGCATTCTCTTGTTGGAGATGTTTACAGGGAAGAGACCCACTGACAACATGTTTGGTGATAGCTTGAACCTTCATAATTTTGTCAAGATGGCTCTCCCTGGGCGAGTTATTGAGATTGCAGATGCACCACTTCTTCAAGGAGGCTCGAACGAGAATCCCAATCAATGCAGTTCGAGAATTCATAAAGTTGAGGTGTGCTTGAGTTCAATATTTAGAATTGGAATTGCTTGTTCTGCTGAATCCGCAATAGATCGACTAAAGAATATCAATGATGCTGCATCTGAACTTCATTCCATTAGGATTACTTTTCTTGGATAG

Protein Analysis

1029

Amino Acids

111.89

Weight (kDa)

6.77

Isoelectric Point (pI)

39.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 34 - 75 1.4e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 85 - 226 7.5e-08 Leucine-rich repeat region
LRR_14 PF23598 218 - 383 1.5e-07 Leucine-rich repeat region
LRR_14 PF23598 351 - 501 9.9e-10 Leucine-rich repeat region
LRR_14 PF23598 502 - 599 4.4e-06 Leucine-rich repeat region
Pkinase PF00069 714 - 952 1.8e-36 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 716 - 940 6.1e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 735
Acc36I ACCTGC 2 cut(s) 267, 382
Acc65I GGTACC 2 cut(s) 937, 1822
AccB1I GGYRCC 3 cut(s) 937, 1822, 2301
AccB7I CCANNNNNTGG 4 cut(s) 299, 371, 2426, 2723
AccI GTMKAC 2 cut(s) 226, 2760
AciI CCGC 3 cut(s) 1002, 2682, 3012
AclI AACGTT 1 cut(s) 2574
AcoI YGGCCR 2 cut(s) 661, 2599
AcuI CTGAAG 6 cut(s) 331, 492, 817, 1377, 2454, 2459
AfaI GTAC 4 cut(s) 939, 1824, 2180, 2454
AfiI CCNNNNNNNGG 9 cut(s) 82, 299, 371, 587, 613, 1540, 1832, 2426, 2723
AflII CTTAAG 1 cut(s) 1018
AflIII ACRYGT 2 cut(s) 1590, 2817
AhdI GACNNNNNGTC 1 cut(s) 222
AjiI CACGTC 1 cut(s) 219
AjnI CCWGG 3 cut(s) 176, 606, 2866
AjuI GAANNNNNNNTTGG 2 cut(s) 2478, 2510
Alw21I GWGCWC 4 cut(s) 74, 176, 2075, 2512
Alw26I GTCTC 6 cut(s) 606, 950, 1403, 1925, 1956, 2797
Alw44I GTGCAC 1 cut(s) 2508
Ama87I CYCGRG 1 cut(s) 1400
AoxI GGCC 2 cut(s) 661, 2599
ApaLI GTGCAC 1 cut(s) 2508
ApeKI GCWGC 7 cut(s) 118, 532, 1383, 1887, 2413, 2711, 3044
ArsI GACNNNNNNTTYG 2 cut(s) 2804, 2836
Asp718I GGTACC 2 cut(s) 937, 1822
AspLEI GCGC 1 cut(s) 118
AspS9I GGNCC 5 cut(s) 256, 574, 611, 861, 1674
AsuC2I CCSGG 1 cut(s) 615
AsuHPI GGTGA 5 cut(s) 1025, 1207, 1757, 2765, 2837
AsuNHI GCTAGC 1 cut(s) 121
AvaI CYCGRG 1 cut(s) 1400
AvaII GGWCC 5 cut(s) 256, 574, 611, 861, 1674
BaeGI GKGCMC 1 cut(s) 2512
BalI TGGCCA 2 cut(s) 663, 2601
BanI GGYRCC 3 cut(s) 937, 1822, 2301
BanII GRGCYC 2 cut(s) 74, 176
BarI GAAGNNNNNNTAC 4 cut(s) 490, 522, 706, 738
BbsI GAAGAC 4 cut(s) 611, 832, 1314, 2462
Bbv12I GWGCWC 4 cut(s) 74, 176, 2075, 2512
BbvI GCAGC 7 cut(s) 105, 519, 1395, 1899, 2400, 2723, 3031
BccI CCATC 7 cut(s) 134, 631, 802, 1004, 1183, 1359, 2851
BceAI ACGGC 1 cut(s) 2207
BciT130I CCWGG 3 cut(s) 178, 608, 2868
BcnI CCSGG 1 cut(s) 615
BcoDI GTCTC 6 cut(s) 606, 950, 1403, 1925, 1956, 2797
BfaI CTAG 6 cut(s) 122, 1718, 2000, 2372, 2483, 2513
BfmI CTRYAG 2 cut(s) 64, 2761
BfoI RGCGCY 1 cut(s) 119
BfrI CTTAAG 1 cut(s) 1018
BfuAI ACCTGC 2 cut(s) 267, 382
BglII AGATCT 2 cut(s) 148, 1714
BisI GCNGC 7 cut(s) 119, 533, 1384, 1888, 2414, 2712, 3045
BlsI GCNGC 7 cut(s) 120, 534, 1385, 1889, 2415, 2713, 3046
Bme1390I CCNGG 4 cut(s) 178, 608, 615, 2868
Bme18I GGWCC 5 cut(s) 256, 574, 611, 861, 1674
BmeRI GACNNNNNGTC 1 cut(s) 222
BmeT110I CYCGRG 1 cut(s) 1400
BmgBI CACGTC 1 cut(s) 219
BmgT120I GGNCC 5 cut(s) 256, 574, 611, 861, 1674
BmiI GGNNCC 9 cut(s) 576, 593, 612, 862, 939, 1531, 1675, 1824, 2303
BmrFI CCNGG 4 cut(s) 178, 608, 615, 2868
BmrI ACTGGG 4 cut(s) 645, 867, 1045, 1605
BmsI GCATC 6 cut(s) 726, 1179, 2425, 2881, 3031, 3056
BmtI GCTAGC 1 cut(s) 125
BmuI ACTGGG 4 cut(s) 645, 867, 1045, 1605
BpiI GAAGAC 4 cut(s) 611, 832, 1314, 2462
BpmI CTGGAG 4 cut(s) 590, 1620, 1851, 2700
BpuEI CTTGAG 3 cut(s) 1397, 2546, 2989
BpuMI CCSGG 1 cut(s) 615
BsaI GGTCTC 3 cut(s) 1403, 1925, 2797
BsaXI ACNNNNNCTCC 6 cut(s) 367, 397, 930, 960, 1956, 1986
Bsc4I CCNNNNNNNGG 9 cut(s) 82, 299, 371, 587, 613, 1540, 1832, 2426, 2723
Bse1I ACTGG 8 cut(s) 258, 651, 862, 1051, 1611, 1834, 2431, 2602
Bse3DI GCAATG 1 cut(s) 1094
BseBI CCWGG 3 cut(s) 178, 608, 2868
BseGI GGATG 7 cut(s) 645, 717, 1170, 1242, 1369, 2206, 2416
BseLI CCNNNNNNNGG 9 cut(s) 82, 299, 371, 587, 613, 1540, 1832, 2426, 2723
BseMI GCAATG 1 cut(s) 1094
BseMII CTCAG 1 cut(s) 2151
BseNI ACTGG 8 cut(s) 258, 651, 862, 1051, 1611, 1834, 2431, 2602
BseRI GAGGAG 3 cut(s) 1474, 2275, 2420
BseSI GKGCMC 1 cut(s) 2512
BseXI GCAGC 7 cut(s) 105, 519, 1395, 1899, 2400, 2723, 3031
BsgI GTGCAG 3 cut(s) 69, 241, 1906
BshFI GGCC 2 cut(s) 663, 2601
BshNI GGYRCC 3 cut(s) 937, 1822, 2301
BsiHKAI GWGCWC 4 cut(s) 74, 176, 2075, 2512
BsiHKCI CYCGRG 1 cut(s) 1400
BsiSI CCGG 1 cut(s) 614
BslFI GGGAC 5 cut(s) 99, 560, 582, 624, 1105
BslI CCNNNNNNNGG 9 cut(s) 82, 299, 371, 587, 613, 1540, 1832, 2426, 2723
BsmAI GTCTC 6 cut(s) 606, 950, 1403, 1925, 1956, 2797
BsmBI CGTCTC 1 cut(s) 606
BsmFI GGGAC 5 cut(s) 99, 560, 582, 624, 1105
BsmI GAATGC 4 cut(s) 103, 1386, 1412, 2772
BsnI GGCC 2 cut(s) 663, 2601
Bso31I GGTCTC 3 cut(s) 1403, 1925, 2797
BsoBI CYCGRG 1 cut(s) 1400
Bsp1286I GDGCHC 4 cut(s) 74, 176, 2075, 2512
Bsp1407I TGTACA 1 cut(s) 2178
Bsp143I GATC 6 cut(s) 24, 148, 1714, 2446, 2557, 3019
Bsp19I CCATGG 3 cut(s) 1411, 2010, 2248
BspACI CCGC 3 cut(s) 1002, 2682, 3012
BspANI GGCC 2 cut(s) 663, 2601
BspCNI CTCAG 1 cut(s) 2150
BspHI TCATGA 1 cut(s) 352
BspLI GGNNCC 9 cut(s) 576, 593, 612, 862, 939, 1531, 1675, 1824, 2303
BspMI ACCTGC 2 cut(s) 267, 382
BspOI GCTAGC 1 cut(s) 125
BspT107I GGYRCC 3 cut(s) 937, 1822, 2301
BspTI CTTAAG 1 cut(s) 1018
BspTNI GGTCTC 3 cut(s) 1403, 1925, 2797
BsrDI GCAATG 1 cut(s) 1094
BsrGI TGTACA 1 cut(s) 2178
BsrI ACTGG 8 cut(s) 258, 651, 862, 1051, 1611, 1834, 2431, 2602
BssMI GATC 6 cut(s) 24, 148, 1714, 2446, 2557, 3019
BssT1I CCWWGG 6 cut(s) 585, 1273, 1411, 1618, 2010, 2248
Bst2UI CCWGG 3 cut(s) 178, 608, 2868
Bst4CI ACNGT 2 cut(s) 2329, 2701
Bst6I CTCTTC 5 cut(s) 748, 1526, 2001, 2430, 2795
BstAFI CTTAAG 1 cut(s) 1018
BstAPI GCANNNNNTGC 1 cut(s) 397
BstAUI TGTACA 1 cut(s) 2178
BstC8I GCNNGC 3 cut(s) 114, 123, 1422
BstDEI CTNAG 5 cut(s) 308, 317, 1565, 2137, 2401
BstDSI CCRYGG 3 cut(s) 1411, 2010, 2248
BstEII GGTNACC 1 cut(s) 770
BstF5I GGATG 7 cut(s) 645, 717, 1170, 1242, 1369, 2206, 2416
BstH2I RGCGCY 1 cut(s) 119
BstHHI GCGC 1 cut(s) 118
BstKTI GATC 6 cut(s) 27, 151, 1717, 2449, 2560, 3022
BstMAI GTCTC 6 cut(s) 606, 950, 1403, 1925, 1956, 2797
BstMBI GATC 6 cut(s) 24, 148, 1714, 2446, 2557, 3019
BstMWI GCNNNNNNNGC 9 cut(s) 69, 118, 122, 131, 388, 397, 529, 3002, 3011
BstNI CCWGG 3 cut(s) 178, 608, 2868
BstNSI RCATGY 3 cut(s) 205, 1594, 2821
BstPI GGTNACC 1 cut(s) 770
BstSCI CCNGG 4 cut(s) 176, 606, 613, 2866
BstSFI CTRYAG 2 cut(s) 64, 2761
BstSLI GKGCMC 1 cut(s) 2512
BstV1I GCAGC 7 cut(s) 105, 519, 1395, 1899, 2400, 2723, 3031
BstV2I GAAGAC 4 cut(s) 611, 832, 1314, 2462
BstX2I RGATCY 2 cut(s) 148, 1714
BstXI CCANNNNNNTGG 2 cut(s) 857, 1163
BstYI RGATCY 2 cut(s) 148, 1714
BsuRI GGCC 2 cut(s) 663, 2601
BtgI CCRYGG 3 cut(s) 1411, 2010, 2248
BtgZI GCGATG 1 cut(s) 218
BtrI CACGTC 1 cut(s) 219
BtsCI GGATG 7 cut(s) 645, 717, 1170, 1242, 1369, 2206, 2416
BtsI GCAGTG 1 cut(s) 57
BtsIMutI CAGTG 5 cut(s) 52, 57, 855, 1704, 2808
BveI ACCTGC 2 cut(s) 267, 382
Cac8I GCNNGC 3 cut(s) 114, 123, 1422
CciI TCATGA 1 cut(s) 352
CfoI GCGC 1 cut(s) 118
Cfr13I GGNCC 5 cut(s) 256, 574, 611, 861, 1674
CseI GACGC 1 cut(s) 826
Csp6I GTAC 4 cut(s) 938, 1823, 2179, 2453
CviQI GTAC 4 cut(s) 938, 1823, 2179, 2453
DdeI CTNAG 5 cut(s) 308, 317, 1565, 2137, 2401
DpnI GATC 6 cut(s) 26, 150, 1716, 2448, 2559, 3021
DpnII GATC 6 cut(s) 24, 148, 1714, 2446, 2557, 3019
DraI TTTAAA 1 cut(s) 1905
DriI GACNNNNNGTC 1 cut(s) 222
EaeI YGGCCR 2 cut(s) 661, 2599
Eam1104I CTCTTC 5 cut(s) 748, 1526, 2001, 2430, 2795
Eam1105I GACNNNNNGTC 1 cut(s) 222
EarI CTCTTC 5 cut(s) 748, 1526, 2001, 2430, 2795
Ecl136II GAGCTC 2 cut(s) 72, 174
Eco130I CCWWGG 6 cut(s) 585, 1273, 1411, 1618, 2010, 2248
Eco24I GRGCYC 2 cut(s) 74, 176
Eco31I GGTCTC 3 cut(s) 1403, 1925, 2797
Eco47I GGWCC 5 cut(s) 256, 574, 611, 861, 1674
Eco53kI GAGCTC 2 cut(s) 72, 174
Eco57I CTGAAG 6 cut(s) 331, 492, 817, 1377, 2454, 2459
Eco88I CYCGRG 1 cut(s) 1400
Eco91I GGTNACC 1 cut(s) 770
EcoICRI GAGCTC 2 cut(s) 72, 174
EcoO109I RGGNCCY 1 cut(s) 574
EcoO65I GGTNACC 1 cut(s) 770
EcoRI GAATTC 1 cut(s) 2946
EcoRII CCWGG 3 cut(s) 176, 606, 2866
EcoT14I CCWWGG 6 cut(s) 585, 1273, 1411, 1618, 2010, 2248
EcoT38I GRGCYC 2 cut(s) 74, 176
ErhI CCWWGG 6 cut(s) 585, 1273, 1411, 1618, 2010, 2248
Esp3I CGTCTC 1 cut(s) 606
FalI AAGNNNNNCTT 2 cut(s) 2199, 2231
FaqI GGGAC 5 cut(s) 99, 560, 582, 624, 1105
FauNDI CATATG 1 cut(s) 2104
FblI GTMKAC 2 cut(s) 226, 2760
Fnu4HI GCNGC 7 cut(s) 119, 533, 1384, 1888, 2414, 2712, 3045
FokI GGATG 7 cut(s) 632, 704, 1157, 1229, 1376, 2213, 2403
FriOI GRGCYC 2 cut(s) 74, 176
Fsp4HI GCNGC 7 cut(s) 119, 533, 1384, 1888, 2414, 2712, 3045
FspBI CTAG 6 cut(s) 122, 1718, 2000, 2372, 2483, 2513
GlaI GCGC 1 cut(s) 117
GluI GCNGC 7 cut(s) 119, 533, 1384, 1888, 2414, 2712, 3045
GsuI CTGGAG 4 cut(s) 590, 1620, 1851, 2700
HaeII RGCGCY 1 cut(s) 119
HaeIII GGCC 2 cut(s) 663, 2601
HapII CCGG 1 cut(s) 614
HgaI GACGC 1 cut(s) 826
HhaI GCGC 1 cut(s) 118
Hin6I GCGC 1 cut(s) 116
HinP1I GCGC 1 cut(s) 116
HincII GTYRAC 3 cut(s) 227, 412, 2745
HindII GTYRAC 3 cut(s) 227, 412, 2745
HindIII AAGCTT 3 cut(s) 953, 1262, 2283
HpaI GTTAAC 1 cut(s) 412
HpaII CCGG 1 cut(s) 614
HphI GGTGA 5 cut(s) 1025, 1207, 1757, 2765, 2837
Hpy166II GTNNAC 7 cut(s) 227, 412, 2179, 2510, 2745, 2761, 2793
Hpy8I GTNNAC 7 cut(s) 227, 412, 2179, 2510, 2745, 2761, 2793
Hpy99I CGWCG 1 cut(s) 106
HpyCH4III ACNGT 2 cut(s) 2329, 2701
HpyCH4IV ACGT 5 cut(s) 165, 218, 408, 1578, 2574
HpyF10VI GCNNNNNNNGC 9 cut(s) 69, 118, 122, 131, 388, 397, 529, 3002, 3011
HpyF3I CTNAG 5 cut(s) 308, 317, 1565, 2137, 2401
HpySE526I ACGT 5 cut(s) 165, 218, 408, 1578, 2574
HspAI GCGC 1 cut(s) 116
KpnI GGTACC 2 cut(s) 941, 1826
KspAI GTTAAC 1 cut(s) 412
Kzo9I GATC 6 cut(s) 24, 148, 1714, 2446, 2557, 3019
LmnI GCTCC 8 cut(s) 69, 77, 179, 322, 1277, 2252, 2397, 2719
Lsp1109I GCAGC 7 cut(s) 105, 519, 1395, 1899, 2400, 2723, 3031
LweI GCATC 6 cut(s) 726, 1179, 2425, 2881, 3031, 3056
MaeI CTAG 6 cut(s) 122, 1718, 2000, 2372, 2483, 2513
MaeII ACGT 5 cut(s) 165, 218, 408, 1578, 2574
MalI GATC 6 cut(s) 26, 150, 1716, 2448, 2559, 3021
MboI GATC 6 cut(s) 24, 148, 1714, 2446, 2557, 3019
MfeI CAATTG 1 cut(s) 665
MflI RGATCY 2 cut(s) 148, 1714
MhlI GDGCHC 4 cut(s) 74, 176, 2075, 2512
MlsI TGGCCA 2 cut(s) 663, 2601
MluNI TGGCCA 2 cut(s) 663, 2601
MlyI GAGTC 4 cut(s) 81, 908, 952, 1473
MmeI TCCRAC 3 cut(s) 496, 1293, 2763
Mox20I TGGCCA 2 cut(s) 663, 2601
MscI TGGCCA 2 cut(s) 663, 2601
MslI CAYNNNNRTG 1 cut(s) 2355
Msp20I TGGCCA 2 cut(s) 663, 2601
MspA1I CMGCKG 1 cut(s) 2684
MspCI CTTAAG 1 cut(s) 1018
MspI CCGG 1 cut(s) 614
MspR9I CCNGG 4 cut(s) 178, 608, 615, 2868
MunI CAATTG 1 cut(s) 665
Mva1269I GAATGC 4 cut(s) 103, 1386, 1412, 2772
MvaI CCWGG 3 cut(s) 178, 608, 2868
MwoI GCNNNNNNNGC 9 cut(s) 69, 118, 122, 131, 388, 397, 529, 3002, 3011
NciI CCSGG 1 cut(s) 615
NcoI CCATGG 3 cut(s) 1411, 2010, 2248
NdeI CATATG 1 cut(s) 2104
NdeII GATC 6 cut(s) 24, 148, 1714, 2446, 2557, 3019
NheI GCTAGC 1 cut(s) 121
NlaIV GGNNCC 9 cut(s) 576, 593, 612, 862, 939, 1531, 1675, 1824, 2303
NmuCI GTSAC 4 cut(s) 214, 244, 886, 1013
NspI RCATGY 3 cut(s) 205, 1594, 2821
PagI TCATGA 1 cut(s) 352
PasI CCCWGGG 1 cut(s) 2867
PciI ACATGT 2 cut(s) 1590, 2817
PctI GAATGC 4 cut(s) 103, 1386, 1412, 2772
PfeI GAWTC 6 cut(s) 185, 1189, 1205, 1708, 2923, 3008
PflFI GACNNNGTC 1 cut(s) 615
PflMI CCANNNNNTGG 4 cut(s) 299, 371, 2426, 2723
PfoI TCCNGGA 1 cut(s) 176
PkrI GCNGC 7 cut(s) 120, 534, 1385, 1889, 2415, 2713, 3046
PleI GAGTC 4 cut(s) 81, 907, 951, 1473
PpsI GAGTC 4 cut(s) 81, 907, 951, 1473
PpuMI RGGWCCY 1 cut(s) 574
PscI ACATGT 2 cut(s) 1590, 2817
PsiI TTATAA 1 cut(s) 735
Psp124BI GAGCTC 2 cut(s) 74, 176
Psp1406I AACGTT 1 cut(s) 2574
Psp5II RGGWCCY 1 cut(s) 574
Psp6I CCWGG 3 cut(s) 176, 606, 2866
PspEI GGTNACC 1 cut(s) 770
PspGI CCWGG 3 cut(s) 176, 606, 2866
PspN4I GGNNCC 9 cut(s) 576, 593, 612, 862, 939, 1531, 1675, 1824, 2303
PspPI GGNCC 5 cut(s) 256, 574, 611, 861, 1674
PspPPI RGGWCCY 1 cut(s) 574
PsuI RGATCY 2 cut(s) 148, 1714
PsyI GACNNNGTC 1 cut(s) 615
RsaI GTAC 4 cut(s) 939, 1824, 2180, 2454
RsaNI GTAC 4 cut(s) 938, 1823, 2179, 2453
RseI CAYNNNNRTG 1 cut(s) 2355
SacI GAGCTC 2 cut(s) 74, 176
SalI GTCGAC 1 cut(s) 225
SatI GCNGC 7 cut(s) 119, 533, 1384, 1888, 2414, 2712, 3045
Sau3AI GATC 6 cut(s) 24, 148, 1714, 2446, 2557, 3019
Sau96I GGNCC 5 cut(s) 256, 574, 611, 861, 1674
SchI GAGTC 4 cut(s) 81, 908, 952, 1473
ScrFI CCNGG 4 cut(s) 178, 608, 615, 2868
SduI GDGCHC 4 cut(s) 74, 176, 2075, 2512
SfaNI GCATC 6 cut(s) 726, 1179, 2425, 2881, 3031, 3056
SfcI CTRYAG 2 cut(s) 64, 2761
SinI GGWCC 5 cut(s) 256, 574, 611, 861, 1674
SmiMI CAYNNNNRTG 1 cut(s) 2355
SmlI CTYRAG 4 cut(s) 1018, 1376, 2561, 2968
SmoI CTYRAG 4 cut(s) 1018, 1376, 2561, 2968
SsiI CCGC 3 cut(s) 1002, 2682, 3012
SspI AATATT 4 cut(s) 994, 1315, 2296, 2979
SspMI CTAG 6 cut(s) 122, 1718, 2000, 2372, 2483, 2513
SstI GAGCTC 2 cut(s) 74, 176
StyD4I CCNGG 4 cut(s) 176, 606, 613, 2866
StyI CCWWGG 6 cut(s) 585, 1273, 1411, 1618, 2010, 2248
TaaI ACNGT 2 cut(s) 2329, 2701
TaiI ACGT 5 cut(s) 168, 221, 411, 1581, 2577
TaqI TCGA 8 cut(s) 226, 527, 825, 1511, 2258, 2915, 2942, 3022
TatI WGTACW 1 cut(s) 2178
TfiI GAWTC 6 cut(s) 185, 1189, 1205, 1708, 2923, 3008
TscAI CASTG 5 cut(s) 52, 57, 862, 1704, 2815
TseFI GTSAC 4 cut(s) 214, 244, 886, 1013
TseI GCWGC 7 cut(s) 118, 532, 1383, 1887, 2413, 2711, 3044
Tsp45I GTSAC 4 cut(s) 214, 244, 886, 1013
TspGWI ACGGA 3 cut(s) 119, 1308, 1315
TspRI CASTG 5 cut(s) 52, 57, 862, 1704, 2815
Tth111I GACNNNGTC 1 cut(s) 615
Van91I CCANNNNNTGG 4 cut(s) 299, 371, 2426, 2723
Vha464I CTTAAG 1 cut(s) 1018
VneI GTGCAC 1 cut(s) 2508
VpaK11BI GGWCC 5 cut(s) 256, 574, 611, 861, 1674
XbaI TCTAGA 1 cut(s) 1717
XceI RCATGY 3 cut(s) 205, 1594, 2821
XmiI GTMKAC 2 cut(s) 226, 2760
XspI CTAG 6 cut(s) 122, 1718, 2000, 2372, 2483, 2513
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.