pycom01g16840
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Reverse (-)
16302074 .. 16308873
6800 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g16840.2

Sequence Viewer

Length: 3069 bp
ATGCGTCTCCAAGAGGTGGTTACTTCATCCTCCTTACATCTAGGAGGGAATGAGACAGATAGAAAGTCCTTGCTTGCATTTAAAGCTGAAATTGTGAATGATCCACTGGGCATTCTTAGCTCATGGAATGAATCCCTCCACTTCTGTCGGTGGCAAGGCATTACTTGTGGCCGTAGGCATCAGAGAGTCACCGTGCTGGACCTCCAATCAAGTCGGCTGAACGGTCAGCTATCCCCCTACATCGGAAACTTGAGCTTTCTCAGAACTTTTAACCTCCAAAACAACAGCTTCAACAACACCATCCCTCAAGAAATTGGTCGTTTGTTCCGCCTGCAGCAATTACGCCTTGAAAACAACTCCTTCAGTGGTGATATTCCATTCAACATATCACGTTGCTCTAACCTCCAAATACTTCGCATAGCTGGAAACCATCTTATGGGTAAAATTCCAATTGAAATTGGTTCCTTGTCCAAGCTTCAGGAACTGTTTTTAAGAAGAAACAATTTAAGCGGGGAAATCCCACCTTCTTTGGGAAATCTTTCTTCTCTCCAGTCGTTACGTGTGTCAGAAAATAATTTACGTGGAGGTATTCCGAATACCCTTGGCCAGTTGAAAATATTAAAATTTCTTGCAGTGGCTGTAAATTATTTGAATAGTTCCATCCCTCCCTCCATATACAACCTCTCATCAATTACACACATTTCTGTGTCTCTAAACGAACTGCATGGAACTCTTCCTCCTGGGTTGGGCCACGCTATATTTCCATACCTCCAACATTTTAATTTCTTCTCCAACCAATTCAGTGGACCGATACCAACTTCAATCTCCAATGCCTCAAACCTTTCACTGTTTTCTATCTCATTCAATGAGTTTACTGGAAAAGTGCCTAGTCTGGCACGCCTGTCAAATTTGTATTTGTTATTACTTACCGATAACCATCTTGGAAATGATGAGGAAGGTGACTTGGATTTCATCTCTTCTCTAGTTAATTGCACCAAATTAACGAAGTTTGATGTTAGTGGCAATAATTTTGGAGGAATGCTACCTGAATCCATCAGCAATCTCTCGACAGAGCTCAACCTGCTGGTATTTGGTCGTAACCAGATACGTGGAAGAATTCCCATTGGGATCGGAAATCTAGTCAACTTGGAGTCACTAGCCTCTGAGGAAAACCGATTGACAGGCACAATACCAAGTTCTATTGGTAAACTGAAAAGGTTGGATGCTCTATATCTGAACGAGAATAAACTATCAGGTACCATCCCATCTTCTCTTGGAAATCTAACTTCAATGACCAGGTTGATTCTCATGTCAAACAAGTTAGAAGGCAACTTACCGCAAAGTCTTGGAGAATGCAGGAATCTTCTACTTTTAGTTCTTTCCCAAAATAATCTTCGCGGTCAAATTCCTAAAGAAGTTATTGGTTTAGCATCCTTGTCAGTAACTTTGGATCTATCCAGCTACAAGATTAATCGATCCATACCAATGGAGGTAAGCAACTTGATGCATGTAGTTGTCTTGGATGTTTCTGACAATAGGTTATCTGGTGAGATTCCACGAGGCTTAGGGAGTTGTACAAGTTTGGCGACTCTGAATCTGAGTGGAAACTCATTGCAGGGGACCATTCCTGAATCCTTGAGCTCTTTGAGAGGGATTGAGGATTTCGACCTCTCTCGCAACAACTTGTCTGGCAGAATTCCCAGCTATTTGGAGAGTTTCCGCTTCTTGGTGAATTTGAACCTCTCATTTAATGATTTTGAAGGTGCATTACCGATGAAAGGAGTTTTCGAGAATACAAGTGCACTTTCTGTCACTGGAAACTCACGGATTTGTGGAGGTATACCTTCTTTAAGATTGCCCAAATGCGTCTCCAACCAATCTAAGCAAGGCTTATCTTCTAGGCTGAAAATAATTATCTCAGCTGCTTGTGGGGTTGTTGGATTGAGTTTTGCGATTTTGTTTGTGATTCTTTATCGATCAAGAAAAGCAAGAGGAGTGAAGTCAACTTCAGGATCATCATTGGGGGTTTCACTTTTGAAGTTGTCCTACAGAGATCTCCTTAAAGCAACTGATGGGTTCTCTGCAGCCAATTTGATTGGTGCTGGTAGTTTTGGGTCCGTATATAAGGGAATACTCGATCAGCATGAAGGAAGAATTGTTGCAGTGAAAGTACTCAATCTTCAAAGTGCAAGAGCTTCCAAAAGTTTCATTGCTGAATGTGAGGCTCTGAGAACCATTAGGCACCGAAATCTTGTCAAGCTACTGACTGCCTGTTCAAGCATCGATTTTCAAGGGAATGATTTCAAAGCTTTGGTTTATGACTTCATGGTGAATGGAAGTCTCGAAGAATGGCTACATAATTCAGCTCAACGGGGCGACAATCCAATCAATCTGCCAAAGAATCTGGATCTTATTCAGAGAGTAAACATTGCAATTGACATAGCGTGTGCTCTGGATTATTTGCACAACCACTCTCACATGCCAATAGTTCATTGTGATTTAAAGCCAAGCAACATTCTCTTGGATGGTGACATGACTGCATGTGTTGGTGATTTTGGTTTGGCAAGGTTCCTCCCAGAGGCTTCTTGTCCATTTCCTGTGCACGAGAGCTCTTCCAATGCAATAAAAGGCTCCATAGGCTATACAGCCCCAGAGTATGGAATGGGAAGCAAGGTGTCAACATATGGCGACATGTATAGCTACGGAATCCTGTTGTTGGAGATGTTAACAGGCAAGAGGCCGACAAATAACATGTTTAAAGATGGTATGGACCTGCACTATTTTGTTACGATGGCTCTACCAGAACGTGTGGAAGAAATATGTGATCCACTACTTGTTCAAATGGAAGAAAGCAGCAGCAGTACTAATCCCATAAGTAATAGGGGGAATCAAGTCCCAAATGATCAAAGACAAAGGGTTGTGGAGTGCTTGACTTCCATTGCAAGAATAGGAGTTGCTTGTTCTGCAGCAATGCCGAGAGATCGAAAGGACATAAGCAATGTTGTCACTGAGTTGTGTCTAACAAGGGATGTGCTAACTGGAACAAGGAGGCCTAGAGAGCATCTGTGA

Protein Analysis

1023

Amino Acids

111.87

Weight (kDa)

8.71

Isoelectric Point (pI)

42.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1089, 2781
Acc65I GGTACC 1 cut(s) 1256
AccB1I GGYRCC 2 cut(s) 1256, 2241
AccB7I CCANNNNNTGG 3 cut(s) 16, 436, 2657
AccI GTMKAC 1 cut(s) 1840
AccII CGCG 1 cut(s) 1398
AciI CCGC 5 cut(s) 328, 510, 1337, 1398, 1720
AclWI GGATC 7 cut(s) 95, 1136, 1458, 1470, 2020, 2415, 2819
AcoI YGGCCR 2 cut(s) 169, 604
AcsI RAATTY 7 cut(s) 444, 623, 907, 1116, 1404, 1695, 1732
AcuI CTGAAG 3 cut(s) 346, 461, 1992
AfaI GTAC 4 cut(s) 1258, 1576, 2172, 2863
AflIII ACRYGT 4 cut(s) 559, 2691, 2751, 2806
AjnI CCWGG 2 cut(s) 739, 1295
AjuI GAANNNNNNNTTGG 2 cut(s) 1377, 1409
AloI GAACNNNNNNTCC 2 cut(s) 721, 753
Alw21I GWGCWC 6 cut(s) 1077, 1643, 1804, 2452, 2604, 2612
Alw26I GTCTC 5 cut(s) 11, 47, 714, 1873, 2345
Alw44I GTGCAC 2 cut(s) 1800, 2600
AlwI GGATC 7 cut(s) 95, 1136, 1458, 1470, 2020, 2415, 2819
AlwNI CAGNNNCTG 2 cut(s) 484, 638
AoxI GGCC 5 cut(s) 169, 604, 748, 2738, 3050
ApaLI GTGCAC 2 cut(s) 1800, 2600
ApeKI GCWGC 6 cut(s) 334, 1922, 2084, 2853, 2856, 2966
ApoI RAATTY 7 cut(s) 444, 623, 907, 1116, 1404, 1695, 1732
AseI ATTAAT 1 cut(s) 1470
Asp700I GAANNNNTTC 2 cut(s) 538, 2300
Asp718I GGTACC 1 cut(s) 1256
AspS9I GGNCC 6 cut(s) 199, 748, 806, 1620, 2115, 2770
AsuHPI GGTGA 8 cut(s) 181, 380, 971, 1559, 1741, 2341, 2540, 2561
AvaII GGWCC 5 cut(s) 199, 806, 1620, 2115, 2770
BaeGI GKGCMC 2 cut(s) 1804, 2604
BalI TGGCCA 1 cut(s) 606
BanI GGYRCC 2 cut(s) 1256, 2241
BanII GRGCYC 3 cut(s) 1077, 1643, 2612
BauI CACGAG 2 cut(s) 1557, 2603
Bbv12I GWGCWC 6 cut(s) 1077, 1643, 1804, 2452, 2604, 2612
BbvI GCAGC 6 cut(s) 346, 1909, 2096, 2865, 2868, 2978
BceAI ACGGC 1 cut(s) 156
BciT130I CCWGG 2 cut(s) 741, 1297
BclI TGATCA 1 cut(s) 2902
BcoDI GTCTC 5 cut(s) 11, 47, 714, 1873, 2345
BfaI CTAG 7 cut(s) 41, 888, 983, 1139, 1157, 1899, 3054
BfmI CTRYAG 4 cut(s) 332, 2047, 2082, 2964
BfuAI ACCTGC 2 cut(s) 1089, 2781
BglII AGATCT 1 cut(s) 2053
BisI GCNGC 6 cut(s) 335, 1923, 2085, 2854, 2857, 2967
BlsI GCNGC 6 cut(s) 336, 1924, 2086, 2855, 2858, 2968
BmcAI AGTACT 2 cut(s) 2172, 2863
Bme1390I CCNGG 2 cut(s) 741, 1297
Bme18I GGWCC 5 cut(s) 199, 806, 1620, 2115, 2770
BmgT120I GGNCC 6 cut(s) 199, 748, 806, 1620, 2115, 2770
BmiI GGNNCC 7 cut(s) 463, 1258, 1621, 2116, 2243, 2570, 2632
BmrFI CCNGG 2 cut(s) 741, 1297
BmrI ACTGGG 1 cut(s) 116
BmsI GCATC 5 cut(s) 187, 1213, 1439, 1494, 2289
BmuI ACTGGG 1 cut(s) 116
BpmI CTGGAG 1 cut(s) 533
Bpu10I CCTNAGC 1 cut(s) 1564
BpuEI CTTGAG 3 cut(s) 271, 291, 1657
Bsa29I ATCGAT 3 cut(s) 1474, 1975, 2283
BsaAI YACGTR 3 cut(s) 560, 581, 1109
BsaBI GATNNNNATC 1 cut(s) 936
BsaJI CCNNGG 2 cut(s) 601, 740
BsaXI ACNNNNNCTCC 2 cut(s) 721, 751
Bse1I ACTGG 6 cut(s) 111, 550, 607, 880, 1819, 3043
Bse3DI GCAATG 6 cut(s) 1610, 2208, 2427, 2937, 2976, 3004
Bse8I GATNNNNATC 1 cut(s) 936
BseBI CCWGG 2 cut(s) 741, 1297
BseCI ATCGAT 3 cut(s) 1474, 1975, 2283
BseDI CCNNGG 2 cut(s) 601, 740
BseGI GGATG 9 cut(s) 26, 300, 660, 1228, 1260, 1430, 1528, 2530, 3034
BseJI GATNNNNATC 1 cut(s) 936
BseMI GCAATG 6 cut(s) 1610, 2208, 2427, 2937, 2976, 3004
BseMII CTCAG 6 cut(s) 274, 1155, 1589, 1932, 2219, 3000
BseNI ACTGG 6 cut(s) 111, 550, 607, 880, 1819, 3043
BseRI GAGGAG 1 cut(s) 2007
BseSI GKGCMC 2 cut(s) 1804, 2604
BseXI GCAGC 6 cut(s) 346, 1909, 2096, 2865, 2868, 2978
BseYI CCCAGC 1 cut(s) 1700
BsgI GTGCAG 1 cut(s) 2759
Bsh1236I CGCG 1 cut(s) 1398
BshFI GGCC 5 cut(s) 171, 606, 750, 2740, 3052
BshNI GGYRCC 2 cut(s) 1256, 2241
BshVI ATCGAT 3 cut(s) 1474, 1975, 2283
BsiHKAI GWGCWC 6 cut(s) 1077, 1643, 1804, 2452, 2604, 2612
BslFI GGGAC 2 cut(s) 1633, 2879
BsmAI GTCTC 5 cut(s) 11, 47, 714, 1873, 2345
BsmBI CGTCTC 2 cut(s) 11, 1873
BsmFI GGGAC 2 cut(s) 1633, 2879
BsmI GAATGC 3 cut(s) 111, 1044, 1358
BsnI GGCC 5 cut(s) 171, 606, 750, 2740, 3052
Bsp1286I GDGCHC 6 cut(s) 1077, 1643, 1804, 2452, 2604, 2612
Bsp1407I TGTACA 1 cut(s) 1574
BspACI CCGC 5 cut(s) 328, 510, 1337, 1398, 1720
BspANI GGCC 5 cut(s) 171, 606, 750, 2740, 3052
BspCNI CTCAG 6 cut(s) 273, 1156, 1590, 1931, 2220, 3001
BspDI ATCGAT 3 cut(s) 1474, 1975, 2283
BspFNI CGCG 1 cut(s) 1398
BspLI GGNNCC 7 cut(s) 463, 1258, 1621, 2116, 2243, 2570, 2632
BspMAI CTGCAG 3 cut(s) 336, 2086, 2968
BspMI ACCTGC 2 cut(s) 1089, 2781
BspPI GGATC 7 cut(s) 95, 1136, 1458, 1470, 2020, 2415, 2819
BspQI GCTCTTC 1 cut(s) 2617
BspT107I GGYRCC 2 cut(s) 1256, 2241
BsrDI GCAATG 6 cut(s) 1610, 2208, 2427, 2937, 2976, 3004
BsrGI TGTACA 1 cut(s) 1574
BsrI ACTGG 6 cut(s) 111, 550, 607, 880, 1819, 3043
BssECI CCNNGG 2 cut(s) 601, 740
BssNAI GTATAC 1 cut(s) 1841
BssSI CACGAG 2 cut(s) 1557, 2603
BssT1I CCWWGG 1 cut(s) 601
Bst1107I GTATAC 1 cut(s) 1841
Bst2BI CACGAG 2 cut(s) 1557, 2603
Bst2UI CCWGG 2 cut(s) 741, 1297
Bst4CI ACNGT 4 cut(s) 193, 224, 486, 849
Bst6I CTCTTC 3 cut(s) 738, 982, 2617
BstAUI TGTACA 1 cut(s) 1574
BstBAI YACGTR 3 cut(s) 560, 581, 1109
BstC8I GCNNGC 3 cut(s) 75, 332, 898
BstDEI CTNAG 9 cut(s) 116, 260, 1164, 1564, 1598, 1881, 1918, 2228, 3009
BstENI CCTNNNNNAGG 1 cut(s) 2576
BstF5I GGATG 9 cut(s) 26, 300, 660, 1228, 1260, 1430, 1528, 2530, 3034
BstFNI CGCG 1 cut(s) 1398
BstMAI GTCTC 5 cut(s) 11, 47, 714, 1873, 2345
BstMWI GCNNNNNNNGC 6 cut(s) 83, 117, 1081, 2637, 2963, 3058
BstNI CCWGG 2 cut(s) 741, 1297
BstNSI RCATGY 5 cut(s) 1511, 2482, 2544, 2695, 2755
BstSCI CCNGG 2 cut(s) 739, 1295
BstSFI CTRYAG 4 cut(s) 332, 2047, 2082, 2964
BstSLI GKGCMC 2 cut(s) 1804, 2604
BstUI CGCG 1 cut(s) 1398
BstV1I GCAGC 6 cut(s) 346, 1909, 2096, 2865, 2868, 2978
BstX2I RGATCY 3 cut(s) 1450, 2053, 2407
BstXI CCANNNNNNTGG 4 cut(s) 803, 1109, 1486, 1708
BstYI RGATCY 3 cut(s) 1450, 2053, 2407
BstZ17I GTATAC 1 cut(s) 1841
Bsu15I ATCGAT 3 cut(s) 1474, 1975, 2283
BsuRI GGCC 5 cut(s) 171, 606, 750, 2740, 3052
BsuTUI ATCGAT 3 cut(s) 1474, 1975, 2283
BtsCI GGATG 9 cut(s) 26, 300, 660, 1228, 1260, 1430, 1528, 2530, 3034
BtsI GCAGTG 2 cut(s) 639, 2169
BtsIMutI CAGTG 8 cut(s) 104, 370, 639, 808, 845, 1812, 2169, 3006
BveI ACCTGC 2 cut(s) 1089, 2781
Cac8I GCNNGC 3 cut(s) 75, 332, 898
CaiI CAGNNNCTG 2 cut(s) 484, 638
Cfr13I GGNCC 6 cut(s) 199, 748, 806, 1620, 2115, 2770
ClaI ATCGAT 3 cut(s) 1474, 1975, 2283
CseI GACGC 1 cut(s) 1855
CsiI ACCWGGT 1 cut(s) 1295
Csp6I GTAC 4 cut(s) 1257, 1575, 2171, 2862
CspCI CAANNNNNGTGG 2 cut(s) 510, 545
CviQI GTAC 4 cut(s) 1257, 1575, 2171, 2862
DdeI CTNAG 9 cut(s) 116, 260, 1164, 1564, 1598, 1881, 1918, 2228, 3009
DraI TTTAAA 3 cut(s) 82, 2502, 2758
EaeI YGGCCR 2 cut(s) 169, 604
Eam1104I CTCTTC 3 cut(s) 738, 982, 2617
EarI CTCTTC 3 cut(s) 738, 982, 2617
EciI GGCGGA 1 cut(s) 317
Ecl136II GAGCTC 3 cut(s) 1075, 1641, 2610
Eco130I CCWWGG 1 cut(s) 601
Eco147I AGGCCT 1 cut(s) 3052
Eco24I GRGCYC 3 cut(s) 1077, 1643, 2612
Eco47I GGWCC 5 cut(s) 199, 806, 1620, 2115, 2770
Eco53kI GAGCTC 3 cut(s) 1075, 1641, 2610
Eco57I CTGAAG 3 cut(s) 346, 461, 1992
EcoICRI GAGCTC 3 cut(s) 1075, 1641, 2610
EcoNI CCTNNNNNAGG 1 cut(s) 2576
EcoRI GAATTC 2 cut(s) 1116, 1695
EcoRII CCWGG 2 cut(s) 739, 1295
EcoT14I CCWWGG 1 cut(s) 601
EcoT22I ATGCAT 1 cut(s) 1509
EcoT38I GRGCYC 3 cut(s) 1077, 1643, 2612
ErhI CCWWGG 1 cut(s) 601
Esp3I CGTCTC 2 cut(s) 11, 1873
FalI AAGNNNNNCTT 2 cut(s) 1874, 1906
FaqI GGGAC 2 cut(s) 1633, 2879
FauI CCCGC 1 cut(s) 503
FauNDI CATATG 1 cut(s) 2683
FbaI TGATCA 1 cut(s) 2902
FblI GTMKAC 1 cut(s) 1840
Fnu4HI GCNGC 6 cut(s) 335, 1923, 2085, 2854, 2857, 2967
FokI GGATG 9 cut(s) 13, 287, 647, 1235, 1247, 1417, 1535, 2537, 3041
FriOI GRGCYC 3 cut(s) 1077, 1643, 2612
Fsp4HI GCNGC 6 cut(s) 335, 1923, 2085, 2854, 2857, 2967
FspBI CTAG 7 cut(s) 41, 888, 983, 1139, 1157, 1899, 3054
GluI GCNGC 6 cut(s) 335, 1923, 2085, 2854, 2857, 2967
GsaI CCCAGC 1 cut(s) 1704
GsuI CTGGAG 1 cut(s) 533
HaeIII GGCC 5 cut(s) 171, 606, 750, 2740, 3052
HgaI GACGC 1 cut(s) 1855
HincII GTYRAC 4 cut(s) 1144, 2004, 2679, 2727
HindII GTYRAC 4 cut(s) 1144, 2004, 2679, 2727
HindIII AAGCTT 2 cut(s) 473, 2307
HpaI GTTAAC 1 cut(s) 2727
HphI GGTGA 8 cut(s) 181, 380, 971, 1559, 1741, 2341, 2540, 2561
HpyAV CCTTC 7 cut(s) 370, 534, 950, 1319, 1754, 1854, 2141
HpyCH4III ACNGT 4 cut(s) 193, 224, 486, 849
HpyCH4IV ACGT 5 cut(s) 391, 559, 580, 1108, 2806
HpyF10VI GCNNNNNNNGC 6 cut(s) 83, 117, 1081, 2637, 2963, 3058
HpyF3I CTNAG 9 cut(s) 116, 260, 1164, 1564, 1598, 1881, 1918, 2228, 3009
HpySE526I ACGT 5 cut(s) 391, 559, 580, 1108, 2806
KpnI GGTACC 1 cut(s) 1260
Ksp22I TGATCA 1 cut(s) 2902
KspAI GTTAAC 1 cut(s) 2727
LguI GCTCTTC 1 cut(s) 2617
LmnI GCTCC 1 cut(s) 2636
Lsp1109I GCAGC 6 cut(s) 346, 1909, 2096, 2865, 2868, 2978
LweI GCATC 5 cut(s) 187, 1213, 1439, 1494, 2289
MabI ACCWGGT 1 cut(s) 1295
MaeI CTAG 7 cut(s) 41, 888, 983, 1139, 1157, 1899, 3054
MaeII ACGT 5 cut(s) 391, 559, 580, 1108, 2806
MfeI CAATTG 2 cut(s) 450, 2433
MflI RGATCY 3 cut(s) 1450, 2053, 2407
MhlI GDGCHC 6 cut(s) 1077, 1643, 1804, 2452, 2604, 2612
MlsI TGGCCA 1 cut(s) 606
MluNI TGGCCA 1 cut(s) 606
MlyI GAGTC 3 cut(s) 195, 1160, 1582
MmeI TCCRAC 6 cut(s) 796, 816, 1200, 1896, 1918, 2697
Mox20I TGGCCA 1 cut(s) 606
Mph1103I ATGCAT 1 cut(s) 1509
MroXI GAANNNNTTC 2 cut(s) 538, 2300
MscI TGGCCA 1 cut(s) 606
MslI CAYNNNNRTG 2 cut(s) 704, 1484
Msp20I TGGCCA 1 cut(s) 606
MspA1I CMGCKG 1 cut(s) 1922
MspR9I CCNGG 2 cut(s) 741, 1297
MunI CAATTG 2 cut(s) 450, 2433
Mva1269I GAATGC 3 cut(s) 111, 1044, 1358
MvaI CCWGG 2 cut(s) 741, 1297
MvnI CGCG 1 cut(s) 1398
MwoI GCNNNNNNNGC 6 cut(s) 83, 117, 1081, 2637, 2963, 3058
NdeI CATATG 1 cut(s) 2683
NlaIV GGNNCC 7 cut(s) 463, 1258, 1621, 2116, 2243, 2570, 2632
NmeAIII GCCGAG 1 cut(s) 3000
NmuCI GTSAC 6 cut(s) 187, 959, 1152, 1810, 2528, 3004
NsiI ATGCAT 1 cut(s) 1509
NspI RCATGY 5 cut(s) 1511, 2482, 2544, 2695, 2755
PceI AGGCCT 1 cut(s) 3052
PciI ACATGT 2 cut(s) 2691, 2751
PciSI GCTCTTC 1 cut(s) 2617
PctI GAATGC 3 cut(s) 111, 1044, 1358
PdmI GAANNNNTTC 2 cut(s) 538, 2300
PflMI CCANNNNNTGG 3 cut(s) 16, 436, 2657
PkrI GCNGC 6 cut(s) 336, 1924, 2086, 2855, 2858, 2968
PleI GAGTC 3 cut(s) 194, 1159, 1582
PpsI GAGTC 3 cut(s) 194, 1159, 1582
Ppu21I YACGTR 3 cut(s) 560, 581, 1109
PscI ACATGT 2 cut(s) 2691, 2751
PshBI ATTAAT 1 cut(s) 1470
Psp124BI GAGCTC 3 cut(s) 1077, 1643, 2612
Psp6I CCWGG 2 cut(s) 739, 1295
PspFI CCCAGC 1 cut(s) 1700
PspGI CCWGG 2 cut(s) 739, 1295
PspN4I GGNNCC 7 cut(s) 463, 1258, 1621, 2116, 2243, 2570, 2632
PspPI GGNCC 6 cut(s) 199, 748, 806, 1620, 2115, 2770
PstI CTGCAG 3 cut(s) 336, 2086, 2968
PstNI CAGNNNCTG 2 cut(s) 484, 638
PsuI RGATCY 3 cut(s) 1450, 2053, 2407
PvuII CAGCTG 1 cut(s) 1922
RsaI GTAC 4 cut(s) 1258, 1576, 2172, 2863
RsaNI GTAC 4 cut(s) 1257, 1575, 2171, 2862
RseI CAYNNNNRTG 2 cut(s) 704, 1484
SacI GAGCTC 3 cut(s) 1077, 1643, 2612
SapI GCTCTTC 1 cut(s) 2617
SatI GCNGC 6 cut(s) 335, 1923, 2085, 2854, 2857, 2967
Sau96I GGNCC 6 cut(s) 199, 748, 806, 1620, 2115, 2770
ScaI AGTACT 2 cut(s) 2172, 2863
SchI GAGTC 3 cut(s) 195, 1160, 1582
ScrFI CCNGG 2 cut(s) 741, 1297
SduI GDGCHC 6 cut(s) 1077, 1643, 1804, 2452, 2604, 2612
SexAI ACCWGGT 1 cut(s) 1295
SfaNI GCATC 5 cut(s) 187, 1213, 1439, 1494, 2289
SfcI CTRYAG 4 cut(s) 332, 2047, 2082, 2964
SinI GGWCC 5 cut(s) 199, 806, 1620, 2115, 2770
SmiMI CAYNNNNRTG 2 cut(s) 704, 1484
SmlI CTYRAG 3 cut(s) 250, 306, 1636
SmoI CTYRAG 3 cut(s) 250, 306, 1636
SseBI AGGCCT 1 cut(s) 3052
SsiI CCGC 5 cut(s) 328, 510, 1337, 1398, 1720
SspI AATATT 1 cut(s) 618
SspMI CTAG 7 cut(s) 41, 888, 983, 1139, 1157, 1899, 3054
SstI GAGCTC 3 cut(s) 1077, 1643, 2612
StuI AGGCCT 1 cut(s) 3052
StyD4I CCNGG 2 cut(s) 739, 1295
StyI CCWWGG 1 cut(s) 601
TaaI ACNGT 4 cut(s) 193, 224, 486, 849
TaiI ACGT 5 cut(s) 394, 562, 583, 1111, 2809
TaqI TCGA 9 cut(s) 1067, 1474, 1665, 1788, 1975, 2136, 2283, 2343, 2983
TaqII GACCGA 1 cut(s) 823
TatI WGTACW 3 cut(s) 1574, 2170, 2861
TscAI CASTG 8 cut(s) 111, 370, 639, 808, 852, 1819, 2169, 3013
TseFI GTSAC 6 cut(s) 187, 959, 1152, 1810, 2528, 3004
TseI GCWGC 6 cut(s) 334, 1922, 2084, 2853, 2856, 2966
Tsp45I GTSAC 6 cut(s) 187, 959, 1152, 1810, 2528, 3004
TspDTI ATGAA 8 cut(s) 15, 144, 961, 1790, 2160, 2197, 2314, 2480
TspGWI ACGGA 3 cut(s) 1840, 2107, 2718
TspRI CASTG 8 cut(s) 111, 370, 639, 808, 852, 1819, 2169, 3013
Van91I CCANNNNNTGG 3 cut(s) 16, 436, 2657
VneI GTGCAC 2 cut(s) 1800, 2600
VpaK11BI GGWCC 5 cut(s) 199, 806, 1620, 2115, 2770
VspI ATTAAT 1 cut(s) 1470
XagI CCTNNNNNAGG 1 cut(s) 2576
XapI RAATTY 7 cut(s) 444, 623, 907, 1116, 1404, 1695, 1732
XceI RCATGY 5 cut(s) 1511, 2482, 2544, 2695, 2755
XmiI GTMKAC 1 cut(s) 1840
XmnI GAANNNNTTC 2 cut(s) 538, 2300
XspI CTAG 7 cut(s) 41, 888, 983, 1139, 1157, 1899, 3054
ZrmI AGTACT 2 cut(s) 2172, 2863
Zsp2I ATGCAT 1 cut(s) 1509
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.