RLG00000028091
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
18593809 .. 18596769
2961 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028091

Sequence Viewer

Length: 2835 bp
ATGCTGGACCTCAAATCACAAGGCTTGTCCGGCTTCATATCCCCACACATAGGAAATCTAAGTTTCCTAAGGGAGATGTACCTCTATAGCAATAACTTCACTCATGAAATTCCTCCAGAAATTGGGCGTTTGCGTAGGTTGCAGGTATTACACCTAGCTAATAATTCATTTACTGGCCATATTCCTACCAACATATCCAATTGCTTCAATCTTACCTATCTCAGTTTCGGGTTCAACAAGCTGGTTGGCGAAATTCCTTCCCAACTCGGTTTCTTGTCTAAGCTTCAGACAATTGATTTCGACCATAATAATTTTACTGGAGAATTCCCTCCTTCCTTTGGGAATCTTTCATCTCTTACGCAGCTCAGTGCAACTGTTAACAACTTGGTGGGTAGCATCCCTACGTCTTTAGGCCAATTGAAAAAATTAACTTTCTTTTCGTTGGGTGGTAATATGTTGTCTGGTTTCATGCCTCCCTCCATTTTTAACTTATCTGCCATTGTTTCTTTTTCCATACTACAAAACCAAATTCAAGGAAATCTTCCCTTAAACTTCAGTGATGCTTTTCCAGTCATCAAGGTCTTTAGCATTTCGGGAAACAAATTTATTGGAGGCATTCCAGTGTCAATATCCAATGCAACAAGTCTAGTGTCCTTCGATGTCTCCCGGAACAATCTAACAGGACAAGTGCCCAGTTTGCTACTACTTCATAACCTCATGGTTTTCTCAGTCGCAGATAATCATCTTGGAAGTGGTAAAGATGGTGACTTGAGTTTTGTCTCGGAAATGATCAATGCCACACAGTTAATGTGGGTGTTTTTAGCTTACAACAATTTCGGAGGGACATTGCCCACATCAGTATCCAATCTCTCAACCACTCTTGAACAGCTTTGGGTTCAAGGAAACAGCCTACATGGTAGCATCCCAAAGTTGGGGAATCTTGTCAACTTGCAATCATTGTCTATGGAGGAAAACTCCTTCACAGGTAACATCCCCACTGACATTGGGAAGCTTATAAGGCTTGGGGCATTGTCTCTTAATAGCAACAAACTATCAGGGAGCCTTCCATCCTCTCTTGGAAATTTAACCATGTTAACCCTTCTTTACTTGCAAAGAAATAATCTTAATGGCACCATCCCTTTAAGCCTTGGGCAATGCCAGGGGTTGCTAGAGTTGGATCTTTCTCAAAATAACATTGATGGCACAATACCCCAACAACTGCCTATTGGCCTCCCTTTTTTATCAATTTCTTTGAACTTGTCGAAAAATCACTTTTATGGTTCTCTCCCATTGGAGATAGGAAATTTGAAGAATCTAGGTGCATTGGATGTTTCAGACAACTTGTTATCTGGAGAACTTCCTCCTAGCCTCGGCAGTTGTAAGAGTTTAGAAGTCTTACACTTGCAAGGTAACTTATTCCATGGGCTCATTCCTTCATCTATGAGTGAGTTGAGAGGGATTCGAGATTTAGACCTTTCTCACAACAATTTTTCAGGAGATATTCCACATTTCCTAGAAGGCCTTGGTAACTTGCAGAATCTGAACTTGTCCTTCAATGATTTTTGGGGAGCAGTACCAATTGGGGGTGTTTTTAAGAATGTAAGTGTCAGTTCAGTTGTGGGAAACATTGGGCTCTGCAGCGTCACTGCTAATCTTCGACTTCCTTTGTGCAAGTCTAAGGAGTCTAAAGGAGGAGGATTATCCTCCCCTAGAATGAAACTAATGATTTCTCTAGTATCCGGGTTCACTCTTTTGGGAATTATTGTGGTTGTGGTGATCTATATTCTATTTCGTTGTTCAAGAAAGAAAATGAAAGGAACTGAATTGAGCACTTTGGGGAACTCTATGTTGCAAGTTTCATATGCTAGTCTCCTAAACGCTACTAATGGGTTCTCTTCAACTAATTTGATTGGCATTGGCGCTTTTGGGTCCGTGTACAAAGGAATTCTTGCTGATGATGCAGCTATTGTTGCTGTGAAGGTGTTTAACATGTTACATCGGGGTGCTTCTAAGAGTTTCATCTCCGAATGTGAGGCATTGAGAAACATCAGACATCGAAATCTGGTAAAGATTTTAACTGCATGCTCAAGTATTGATTTCAATGGCAATGATTTTAAGGCTCTTGTTTACGAGTTCATGGACAATGGGAGCTTAGAGGATTGGTTGCATCCATCTACTGGAACTGAAGAGCTAACAGAAGCACCCAAAAGTTTAAATCTAGTTCAAAGGGTCGACATTGCCATTGATGTTGCTTCTGCATTGGATTATCTTCACAACCACTGTGAAACACCGATTGTTCATTGTGATCTCAAGCCAAGTAATGTTCTTTTGGACAGTGATCTGACTGGACATGTTTCTGACTTTGGGCTGTCAAGGTTTCTAACAGCACCAACCACTAATGTGCCCGAAAATCAGTCAAGCTCCATTGGAATCCGAGGATCGGTTGGCTATGCTGCACCAGAGTATGGTATGGGAAGTGAGGTATCTGTATATGGGGATGTCTATAGCTTTGGCATTCTTTTGTTAGAAATGTTTACTGGGAAGAGACCCACTGATCACATGTTCAGTGATGGCTTGAATCTTCATAATTATGTGAAGACAGCTCTCCCTGAATGTGTTTCAGAGATTTCAGAATCACTAGTTCTTCAAGAAGGCGCCGTCAATGTCGTTGAAGCTCGCAGACAACTGAGTGTTACACCACAGAAAATTGAAGAGTGCTTGACTGTGATATTTGGAATTGGGATTGCATGTTCTACTGACTCCCCAACAAACAGAAAGGATATCAGTAATGTTGCAGCTGAATTGAAGTCCATTAGGAAAAACTTACTAGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

945

Amino Acids

101.87

Weight (kDa)

6.0

Isoelectric Point (pI)

35.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 63 - 147 3.7e-07 Leucine-rich repeat region
LRR_14 PF23598 305 - 396 9.3e-07 Leucine-rich repeat region
LRR_14 PF23598 418 - 515 1.3e-08 Leucine-rich repeat region
LRR_8 PF13855 462 - 521 3.3e-08 Leucine rich repeat
Pkinase PF00069 633 - 858 4.8e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 635 - 855 7.6e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1016
Acc36I ACCTGC 1 cut(s) 133
AccB1I GGYRCC 2 cut(s) 1130, 2654
AccB7I CCANNNNNTGG 3 cut(s) 122, 2177, 2465
AccI GTMKAC 1 cut(s) 2232
AclWI GGATC 2 cut(s) 1185, 2446
AcoI YGGCCR 1 cut(s) 175
AcsI RAATTY 8 cut(s) 108, 252, 323, 528, 602, 1081, 1303, 1944
AcuI CTGAAG 3 cut(s) 269, 538, 2205
AcyI GRCGYC 1 cut(s) 2655
AfaI GTAC 3 cut(s) 80, 1575, 1937
AflIII ACRYGT 3 cut(s) 1989, 2350, 2559
AhlI ACTAGT 1 cut(s) 2638
AjnI CCWGG 1 cut(s) 1158
AleI CACNNNNGTG 1 cut(s) 2399
AloI GAACNNNNNNTCC 2 cut(s) 2734, 2766
Alw21I GWGCWC 1 cut(s) 1832
Alw26I GTCTC 5 cut(s) 667, 784, 1038, 1874, 2539
AlwI GGATC 2 cut(s) 1185, 2446
AlwNI CAGNNNCTG 1 cut(s) 1540
AoxI GGCC 4 cut(s) 175, 412, 1228, 1519
ApeKI GCWGC 5 cut(s) 361, 1638, 1961, 2453, 2795
ApoI RAATTY 8 cut(s) 108, 252, 323, 528, 602, 1081, 1303, 1944
ArsI GACNNNNNNTTYG 2 cut(s) 758, 790
AspLEI GCGC 2 cut(s) 1922, 2657
AspS9I GGNCC 2 cut(s) 7, 1929
AsuC2I CCSGG 2 cut(s) 667, 1741
AsuHPI GGTGA 2 cut(s) 776, 1786
AvaII GGWCC 2 cut(s) 7, 1929
AxyI CCTNAGG 1 cut(s) 68
BaeGI GKGCMC 2 cut(s) 693, 2406
BaeI ACNNNNGTAYC 2 cut(s) 843, 876
BalI TGGCCA 1 cut(s) 177
BanI GGYRCC 2 cut(s) 1130, 2654
BanII GRGCYC 2 cut(s) 1428, 1635
BbsI GAAGAC 1 cut(s) 2603
Bbv12I GWGCWC 1 cut(s) 1832
BbvI GCAGC 5 cut(s) 373, 1650, 1973, 2440, 2807
BccI CCATC 6 cut(s) 755, 1075, 1142, 1193, 2179, 2564
BceAI ACGGC 1 cut(s) 2642
BciT130I CCWGG 1 cut(s) 1160
BciVI GTATCC 2 cut(s) 871, 1747
BclI TGATCA 2 cut(s) 789, 2554
BcnI CCSGG 2 cut(s) 667, 1741
BcoDI GTCTC 5 cut(s) 667, 784, 1038, 1874, 2539
BcuI ACTAGT 1 cut(s) 2638
BfmI CTRYAG 3 cut(s) 85, 1636, 2503
BfoI RGCGCY 2 cut(s) 1923, 2658
BfuAI ACCTGC 1 cut(s) 133
BfuI GTATCC 2 cut(s) 871, 1747
BisI GCNGC 5 cut(s) 362, 1639, 1962, 2454, 2796
BlsI GCNGC 5 cut(s) 363, 1640, 1963, 2455, 2797
Bme1390I CCNGG 3 cut(s) 667, 1160, 1741
Bme18I GGWCC 2 cut(s) 7, 1929
BmgT120I GGNCC 2 cut(s) 7, 1929
BmiI GGNNCC 4 cut(s) 1061, 1132, 1930, 2656
BmrFI CCNGG 3 cut(s) 667, 1160, 1741
BmrI ACTGGG 2 cut(s) 687, 2547
BmsI GCATC 5 cut(s) 405, 550, 930, 1948, 2176
BmuI ACTGGG 2 cut(s) 687, 2547
BpiI GAAGAC 1 cut(s) 2603
BplI GAGNNNNNCTC 2 cut(s) 959, 991
BpmI CTGGAG 3 cut(s) 99, 339, 1371
BpuEI CTTGAG 3 cut(s) 790, 2071, 2294
BpuMI CCSGG 2 cut(s) 667, 1741
BsaBI GATNNNNATC 1 cut(s) 741
BsaHI GRCGYC 1 cut(s) 2655
BsaI GGTCTC 1 cut(s) 2539
BsaJI CCNNGG 6 cut(s) 1147, 1159, 1369, 1420, 1522, 2434
Bse1I ACTGG 8 cut(s) 178, 322, 569, 620, 693, 2182, 2350, 2542
Bse21I CCTNAGG 1 cut(s) 68
Bse3DI GCAATG 4 cut(s) 845, 1160, 2113, 2235
Bse8I GATNNNNATC 1 cut(s) 741
BseBI CCWGG 1 cut(s) 1160
BseDI CCNNGG 6 cut(s) 1147, 1159, 1369, 1420, 1522, 2434
BseGI GGATG 8 cut(s) 396, 921, 990, 1067, 1134, 1333, 2167, 2503
BseJI GATNNNNATC 1 cut(s) 741
BseMI GCAATG 4 cut(s) 845, 1160, 2113, 2235
BseMII CTCAG 4 cut(s) 235, 379, 741, 2678
BseNI ACTGG 8 cut(s) 178, 322, 569, 620, 693, 2182, 2350, 2542
BseRI GAGGAG 1 cut(s) 1707
BseSI GKGCMC 2 cut(s) 693, 2406
BseXI GCAGC 5 cut(s) 373, 1650, 1973, 2440, 2807
BsgI GTGCAG 1 cut(s) 2439
BshFI GGCC 4 cut(s) 177, 414, 1230, 1521
BshNI GGYRCC 2 cut(s) 1130, 2654
BsiHKAI GWGCWC 1 cut(s) 1832
BsiSI CCGG 3 cut(s) 30, 667, 1740
BslFI GGGAC 1 cut(s) 856
BsmAI GTCTC 5 cut(s) 667, 784, 1038, 1874, 2539
BsmFI GGGAC 1 cut(s) 856
BsmI GAATGC 2 cut(s) 615, 2514
BsnI GGCC 4 cut(s) 177, 414, 1230, 1521
Bso31I GGTCTC 1 cut(s) 2539
Bsp1286I GDGCHC 5 cut(s) 693, 1428, 1635, 1832, 2406
Bsp1407I TGTACA 1 cut(s) 1935
Bsp143I GATC 7 cut(s) 789, 1177, 1776, 2305, 2338, 2438, 2554
Bsp19I CCATGG 1 cut(s) 1420
BspANI GGCC 4 cut(s) 177, 414, 1230, 1521
BspCNI CTCAG 4 cut(s) 234, 378, 740, 2679
BspHI TCATGA 1 cut(s) 103
BspLI GGNNCC 4 cut(s) 1061, 1132, 1930, 2656
BspMAI CTGCAG 1 cut(s) 1640
BspMI ACCTGC 1 cut(s) 133
BspPI GGATC 2 cut(s) 1185, 2446
BspQI GCTCTTC 1 cut(s) 2181
BspT107I GGYRCC 2 cut(s) 1130, 2654
BspTNI GGTCTC 1 cut(s) 2539
BsrDI GCAATG 4 cut(s) 845, 1160, 2113, 2235
BsrGI TGTACA 1 cut(s) 1935
BsrI ACTGG 8 cut(s) 178, 322, 569, 620, 693, 2182, 2350, 2542
BssECI CCNNGG 6 cut(s) 1147, 1159, 1369, 1420, 1522, 2434
BssMI GATC 7 cut(s) 789, 1177, 1776, 2305, 2338, 2438, 2554
BssNI GRCGYC 1 cut(s) 2655
BssT1I CCWWGG 3 cut(s) 1147, 1420, 1522
Bst2UI CCWGG 1 cut(s) 1160
Bst4CI ACNGT 5 cut(s) 376, 804, 2282, 2336, 2725
Bst6I CTCTTC 4 cut(s) 1900, 2181, 2537, 2706
BstACI GRCGYC 1 cut(s) 2655
BstAUI TGTACA 1 cut(s) 1935
BstC8I GCNNGC 2 cut(s) 2083, 2677
BstDSI CCRYGG 1 cut(s) 1420
BstF5I GGATG 8 cut(s) 396, 921, 990, 1067, 1134, 1333, 2167, 2503
BstH2I RGCGCY 2 cut(s) 1923, 2658
BstHHI GCGC 2 cut(s) 1922, 2657
BstKTI GATC 7 cut(s) 792, 1180, 1779, 2308, 2341, 2441, 2557
BstMAI GTCTC 5 cut(s) 667, 784, 1038, 1874, 2539
BstMBI GATC 7 cut(s) 789, 1177, 1776, 2305, 2338, 2438, 2554
BstMWI GCNNNNNNNGC 6 cut(s) 30, 139, 697, 1018, 1958, 1970
BstNI CCWGG 1 cut(s) 1160
BstNSI RCATGY 5 cut(s) 1993, 2085, 2354, 2563, 2751
BstSCI CCNGG 3 cut(s) 665, 1158, 1739
BstSFI CTRYAG 3 cut(s) 85, 1636, 2503
BstSLI GKGCMC 2 cut(s) 693, 2406
BstV1I GCAGC 5 cut(s) 373, 1650, 1973, 2440, 2807
BstV2I GAAGAC 1 cut(s) 2603
BstX2I RGATCY 1 cut(s) 1177
BstYI RGATCY 1 cut(s) 1177
Bsu36I CCTNAGG 1 cut(s) 68
BsuI GTATCC 2 cut(s) 871, 1747
BsuRI GGCC 4 cut(s) 177, 414, 1230, 1521
BtgI CCRYGG 1 cut(s) 1420
BtsCI GGATG 8 cut(s) 396, 921, 990, 1067, 1134, 1333, 2167, 2503
BtsI GCAGTG 1 cut(s) 1644
BtsIMutI CAGTG 9 cut(s) 373, 562, 627, 996, 1644, 2278, 2341, 2550, 2572
BveI ACCTGC 1 cut(s) 133
Cac8I GCNNGC 2 cut(s) 2083, 2677
CaiI CAGNNNCTG 1 cut(s) 1540
CciI TCATGA 1 cut(s) 103
CfoI GCGC 2 cut(s) 1922, 2657
Cfr13I GGNCC 2 cut(s) 7, 1929
CseI GACGC 1 cut(s) 1630
Csp6I GTAC 3 cut(s) 79, 1574, 1936
CspCI CAANNNNNGTGG 2 cut(s) 985, 1020
CviQI GTAC 3 cut(s) 79, 1574, 1936
DinI GGCGCC 1 cut(s) 2656
DpnI GATC 7 cut(s) 791, 1179, 1778, 2307, 2340, 2440, 2556
DpnII GATC 7 cut(s) 789, 1177, 1776, 2305, 2338, 2438, 2554
DraI TTTAAA 1 cut(s) 2214
EaeI YGGCCR 1 cut(s) 175
Eam1104I CTCTTC 4 cut(s) 1900, 2181, 2537, 2706
EarI CTCTTC 4 cut(s) 1900, 2181, 2537, 2706
Eco130I CCWWGG 3 cut(s) 1147, 1420, 1522
Eco147I AGGCCT 1 cut(s) 1521
Eco24I GRGCYC 2 cut(s) 1428, 1635
Eco31I GGTCTC 1 cut(s) 2539
Eco32I GATATC 1 cut(s) 2782
Eco47I GGWCC 2 cut(s) 7, 1929
Eco57I CTGAAG 3 cut(s) 269, 538, 2205
Eco81I CCTNAGG 1 cut(s) 68
EcoRI GAATTC 2 cut(s) 323, 1944
EcoRII CCWGG 1 cut(s) 1158
EcoRV GATATC 1 cut(s) 2782
EcoT14I CCWWGG 3 cut(s) 1147, 1420, 1522
EcoT38I GRGCYC 2 cut(s) 1428, 1635
EgeI GGCGCC 1 cut(s) 2656
EheI GGCGCC 1 cut(s) 2656
ErhI CCWWGG 3 cut(s) 1147, 1420, 1522
FalI AAGNNNNNCTT 4 cut(s) 525, 557, 1932, 1964
FaqI GGGAC 1 cut(s) 856
FauNDI CATATG 1 cut(s) 1861
FbaI TGATCA 2 cut(s) 789, 2554
FblI GTMKAC 1 cut(s) 2232
Fnu4HI GCNGC 5 cut(s) 362, 1639, 1962, 2454, 2796
FokI GGATG 8 cut(s) 383, 908, 977, 1054, 1121, 1340, 2154, 2510
FriOI GRGCYC 2 cut(s) 1428, 1635
Fsp4HI GCNGC 5 cut(s) 362, 1639, 1962, 2454, 2796
GlaI GCGC 2 cut(s) 1921, 2656
GluI GCNGC 5 cut(s) 362, 1639, 1962, 2454, 2796
GsuI CTGGAG 3 cut(s) 99, 339, 1371
HaeII RGCGCY 2 cut(s) 1923, 2658
HaeIII GGCC 4 cut(s) 177, 414, 1230, 1521
HapII CCGG 3 cut(s) 30, 667, 1740
HgaI GACGC 1 cut(s) 1630
HhaI GCGC 2 cut(s) 1922, 2657
Hin1I GRCGYC 1 cut(s) 2655
Hin6I GCGC 2 cut(s) 1920, 2655
HinP1I GCGC 2 cut(s) 1920, 2655
HincII GTYRAC 4 cut(s) 379, 946, 1095, 2233
HindII GTYRAC 4 cut(s) 379, 946, 1095, 2233
HindIII AAGCTT 2 cut(s) 281, 1010
HpaI GTTAAC 2 cut(s) 379, 1095
HpaII CCGG 3 cut(s) 30, 667, 1740
HphI GGTGA 2 cut(s) 776, 1786
Hpy166II GTNNAC 8 cut(s) 379, 946, 1095, 1746, 1936, 2128, 2233, 2535
Hpy188III TCNNGA 9 cut(s) 104, 116, 594, 881, 1350, 1463, 1494, 1800, 2648
Hpy8I GTNNAC 8 cut(s) 379, 946, 1095, 1746, 1936, 2128, 2233, 2535
HpyCH4III ACNGT 5 cut(s) 376, 804, 2282, 2336, 2725
HpyCH4IV ACGT 1 cut(s) 404
HpyF10VI GCNNNNNNNGC 6 cut(s) 30, 139, 697, 1018, 1958, 1970
HpySE526I ACGT 1 cut(s) 404
Hsp92I GRCGYC 1 cut(s) 2655
HspAI GCGC 2 cut(s) 1920, 2655
KasI GGCGCC 1 cut(s) 2654
Ksp22I TGATCA 2 cut(s) 789, 2554
KspAI GTTAAC 2 cut(s) 379, 1095
Kzo9I GATC 7 cut(s) 789, 1177, 1776, 2305, 2338, 2438, 2554
LguI GCTCTTC 1 cut(s) 2181
LmnI GCTCC 4 cut(s) 1059, 1568, 2148, 2426
Lsp1109I GCAGC 5 cut(s) 373, 1650, 1973, 2440, 2807
LweI GCATC 5 cut(s) 405, 550, 930, 1948, 2176
MaeII ACGT 1 cut(s) 404
MaeIII GTNAC 7 cut(s) 764, 986, 1409, 1526, 1642, 1992, 2692
MalI GATC 7 cut(s) 791, 1179, 1778, 2307, 2340, 2440, 2556
MboI GATC 7 cut(s) 789, 1177, 1776, 2305, 2338, 2438, 2554
MfeI CAATTG 4 cut(s) 199, 291, 416, 1578
MflI RGATCY 1 cut(s) 1177
MhlI GDGCHC 5 cut(s) 693, 1428, 1635, 1832, 2406
MlsI TGGCCA 1 cut(s) 177
MluNI TGGCCA 1 cut(s) 177
Mly113I GGCGCC 1 cut(s) 2655
MlyI GAGTC 2 cut(s) 1691, 2753
MmeI TCCRAC 1 cut(s) 1155
Mox20I TGGCCA 1 cut(s) 177
MscI TGGCCA 1 cut(s) 177
MslI CAYNNNNRTG 5 cut(s) 620, 1275, 2001, 2399, 2589
Msp20I TGGCCA 1 cut(s) 177
MspA1I CMGCKG 1 cut(s) 2798
MspI CCGG 3 cut(s) 30, 667, 1740
MspR9I CCNGG 3 cut(s) 667, 1160, 1741
MunI CAATTG 4 cut(s) 199, 291, 416, 1578
Mva1269I GAATGC 2 cut(s) 615, 2514
MvaI CCWGG 1 cut(s) 1160
MwoI GCNNNNNNNGC 6 cut(s) 30, 139, 697, 1018, 1958, 1970
NarI GGCGCC 1 cut(s) 2655
NciI CCSGG 2 cut(s) 667, 1741
NcoI CCATGG 1 cut(s) 1420
NdeI CATATG 1 cut(s) 1861
NdeII GATC 7 cut(s) 789, 1177, 1776, 2305, 2338, 2438, 2554
NlaIV GGNNCC 4 cut(s) 1061, 1132, 1930, 2656
NmeAIII GCCGAG 1 cut(s) 1350
NmuCI GTSAC 2 cut(s) 764, 1642
NspI RCATGY 5 cut(s) 1993, 2085, 2354, 2563, 2751
OliI CACNNNNGTG 1 cut(s) 2399
PaeI GCATGC 1 cut(s) 2085
PagI TCATGA 1 cut(s) 103
PceI AGGCCT 1 cut(s) 1521
PciI ACATGT 3 cut(s) 1989, 2350, 2559
PciSI GCTCTTC 1 cut(s) 2181
PctI GAATGC 2 cut(s) 615, 2514
PfeI GAWTC 8 cut(s) 343, 937, 1312, 1459, 1537, 2430, 2578, 2633
PflMI CCANNNNNTGG 3 cut(s) 122, 2177, 2465
PfoI TCCNGGA 1 cut(s) 665
PkrI GCNGC 5 cut(s) 363, 1640, 1963, 2455, 2797
PleI GAGTC 2 cut(s) 1690, 2753
PluTI GGCGCC 1 cut(s) 2658
PpsI GAGTC 2 cut(s) 1690, 2753
PscI ACATGT 3 cut(s) 1989, 2350, 2559
PsiI TTATAA 1 cut(s) 1016
Psp6I CCWGG 1 cut(s) 1158
PspGI CCWGG 1 cut(s) 1158
PspN4I GGNNCC 4 cut(s) 1061, 1132, 1930, 2656
PspPI GGNCC 2 cut(s) 7, 1929
PstI CTGCAG 1 cut(s) 1640
PstNI CAGNNNCTG 1 cut(s) 1540
PsuI RGATCY 1 cut(s) 1177
PvuII CAGCTG 1 cut(s) 2798
RsaI GTAC 3 cut(s) 80, 1575, 1937
RsaNI GTAC 3 cut(s) 79, 1574, 1936
RseI CAYNNNNRTG 5 cut(s) 620, 1275, 2001, 2399, 2589
SalI GTCGAC 1 cut(s) 2231
SapI GCTCTTC 1 cut(s) 2181
SatI GCNGC 5 cut(s) 362, 1639, 1962, 2454, 2796
Sau3AI GATC 7 cut(s) 789, 1177, 1776, 2305, 2338, 2438, 2554
Sau96I GGNCC 2 cut(s) 7, 1929
SchI GAGTC 2 cut(s) 1691, 2753
ScrFI CCNGG 3 cut(s) 667, 1160, 1741
SduI GDGCHC 5 cut(s) 693, 1428, 1635, 1832, 2406
SfaNI GCATC 5 cut(s) 405, 550, 930, 1948, 2176
SfcI CTRYAG 3 cut(s) 85, 1636, 2503
SfoI GGCGCC 1 cut(s) 2656
SinI GGWCC 2 cut(s) 7, 1929
SmiMI CAYNNNNRTG 5 cut(s) 620, 1275, 2001, 2399, 2589
SmlI CTYRAG 3 cut(s) 769, 2086, 2309
SmoI CTYRAG 3 cut(s) 769, 2086, 2309
SpeI ACTAGT 1 cut(s) 2638
SphI GCATGC 1 cut(s) 2085
SseBI AGGCCT 1 cut(s) 1521
SspDI GGCGCC 1 cut(s) 2654
StuI AGGCCT 1 cut(s) 1521
StyD4I CCNGG 3 cut(s) 665, 1158, 1739
StyI CCWWGG 3 cut(s) 1147, 1420, 1522
TaaI ACNGT 5 cut(s) 376, 804, 2282, 2336, 2725
TaiI ACGT 1 cut(s) 407
TaqI TCGA 7 cut(s) 300, 657, 1262, 1462, 1657, 2056, 2232
TatI WGTACW 1 cut(s) 1935
TfiI GAWTC 8 cut(s) 343, 937, 1312, 1459, 1537, 2430, 2578, 2633
TscAI CASTG 9 cut(s) 373, 562, 627, 1003, 1651, 2285, 2341, 2557, 2572
TseFI GTSAC 2 cut(s) 764, 1642
TseI GCWGC 5 cut(s) 361, 1638, 1961, 2453, 2795
Tsp45I GTSAC 2 cut(s) 764, 1642
TspGWI ACGGA 1 cut(s) 1921
TspRI CASTG 9 cut(s) 373, 562, 627, 1003, 1651, 2285, 2341, 2557, 2572
Van91I CCANNNNNTGG 3 cut(s) 122, 2177, 2465
VpaK11BI GGWCC 2 cut(s) 7, 1929
XapI RAATTY 8 cut(s) 108, 252, 323, 528, 602, 1081, 1303, 1944
XceI RCATGY 5 cut(s) 1993, 2085, 2354, 2563, 2751
XmiI GTMKAC 1 cut(s) 2232
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.