Rw1G015510

LRR receptor-like serine threonine-protein kinase At3g47570

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Reverse (-)
34594538 .. 34608134
13597 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G015510.1

Sequence Viewer

Length: 3591 bp
ATGGGGATTTACAGGTTCATTTCAGCTGCGTTTTCCTTGTTATGTTTTCACTCTTGCCTTTGTTTGACTCTGAGTGGAAATGAGACGGATCGACTGGCCTTGCTTGACATCAAGGCCAGGATAACTGGTGATCCATTTGGAGCCCTGACTTCATGGAATGATTCTGTCCACTTTTGCCAGTGGCGTAGAGTTACTTGTGGTCTACGACACCAAAGGGTCACGAGGTTGGACCTGCAGTCCTTGCAACTTACAGGCTCCATATCACCACATGTTGGAAATTTGAGTTTTGTGAGAGTGCTGTATCTTCTCAACAACAGCTTCAGCCATGAAATCCCTCCACAAATTGGCCGCCTGCACAGGTTGCAAGATTTGCAGCTGCAGAACAATTCAATAAGTGGTGAAATTCCTTCTAACTTATCTGGTTGCTCTCAACTTGTTACAATTCGTCTTGATATTTTTGGTCAACTGACCAATCTTAGTTTCCTTGCACTCGAAGACAATAGCTTGTCTGGTATCATCCCTCCCTCGATCTTTAATCTCTCCTTCCGCACAGTCTTTTCTGTCATTATAGACCAACTCCAAGGGACTCTGCCCTCAGACCTAGGTGTTGCTCTTCCAAATCTCGAATTTTTTGGTATTGATTACAACCAAATCAGTGGACCTATTCCTGTTTCAATTTCTAATCTCTCAAATCTAGCTTCCCTTCAACTGATTGCAAACCAACTATCTGGAAAAGTTCCTTCTTTGAAAAATTTACATAAACTTGAGAGATTAAATCTCGGGGGCAATAACCATCTTGGAAGTGGGGGAATTGGTGACTTGAGCTTTCTCTGTGATTTGACTAATGCCACTCTTTTAGATGAACTGTTTATTAGTGAAAACAATTTTGGGGGTATATTACCTCAATGCATTGCTAACTTATCTTCTCATCTGGAATACTTCTATGTCAATATCAATAAAATAACAGGAAGCATTCCAAATGGGATTGGAAATCTGGTTAACTTGCAAGGCCTATTTCTTTCAGCAAACCAATTTAAAGGTCAAATTCCCTCTGAAATTGGGAAGCTTCAGAAGTTGGTTGAATTAAACTTATCTATGAACTCTTTCTCTGGGAATATTCCTTCCACTTTTGGAAATTTAAGTTACCTATCTGAATTGGATTTAGATGGAGATAAGCTTCATGGCAGTATCCCCTCATCTCTAGCAGAGTGTCATGATTTGACATCCTTGTTTCTTGGTCAGAACAATCTCAGCGGTACAATTTCCCAAGAAGTCATTGGTCTGTCCTCCTATATTGAGTTTGATTTATATCAAAATCATTTCACTGGTTCCCTTCCACAGAAAATAGAAAATTTGATAAATCTGGAGTACTTTAGATCAAGTCTTGGTAGCTGTATAAAAGTAGAATACCTATACATGCAAGGAAACTTCTTCCAAGGGACAATTCCATCATCTTTGGGTTCTCTGAGGGGTCTTAAAGAGTTACATATTTCTAACAACAACTTGTCAGGCCTCATTCCAGAATTCTTGGAGCATTTTGAATTCCTGCAATCATTGGATTTATCTTATAACAATTTGGAAGGCATGGTACCAGTCAAAGGAGTTTTTCAGAATGCAACAGCCACATCAGTCAAAGGAAATAATAAGCTTTGTGCGGGCATACCTGAGTTTCAATTGCCGAAATGCGAATTTGGACATCCCAAGAAGAGAGGATTAAGCCGAACCTTGAAGCTGATAATCTGTCTCGTTTGTGGGCTTCTTGGAGTCTCCTGCGCTCTGTCATTTTGGTACCTTCTTTGCTCAAGGAGGAAAATAGTGAAGCACACTGCAAGCGATTCAGAAAATTTTCTTAAGGTGTCTTACCAAAATCTTCTAAAAGCTACTGATGGATTCTCCACTGCTAACTTGCTAGGCATGGGCAGTTTTGGATCAGTTTATAAAGGAGTTCTTGAACAAGGTCAAACAACTGTTGCTGTCAAAGTACTTAACCTATTTCATCCTGGAGCTTCCAAAAGTTTCTCTGCTGAGTGTGAGGCATTGAGAAACATTAGACACCGTAATCTTTTGAAGGTACTCTCTGTGTGTTCAGGTTCTGATTTTGAAGGTTGGGATTTTAAGGCCTTAATCTATGAGTTCATGGTTAATGGGAGCTTGGAGGAATGGTTGCATCCAACTCAGACAGTTGCTGAGACAATCGAGAGACCAAGAAGCTTGAGTTTTTCTCAAAGGTTGGCCATATCAAGTGATGTTTCTTTGGCATTGGATTATCTCCATCATCATTGTGAGACGCTGATAGTTCACTGTGACCTCAAACCGAGCGATATCCTTCTCAATGATGATATGGTTGCACATGTTGAATATGGTATGGGACATGAAGTTTGGACACAGGGTGATGTGTACAGTTATGGCATTCTCCTACTGGAAATGTTCGCAGGAAAAAGGCCAACAGATGACATGTTTCAAGGAACTTCAAACCTTCATAACTTTGTGAAGGCAGCTCTGGCTGAGGATGTTATTGAGATTGTGGATCCTGTTCTTGTTCATGAAAAAGCGGAAGGGGAGATCATTGCGGACAAATGTCTTAATGAGGATAGCATAAGGCCTCACATTAAAATAGAAGAAAGCTTGATTTCAATCCTAGAAATTGGTGTGGCTTGCTCTGCAGAACGTCCTAGAGAACGTCCAGACATTAGTGATGTTGTATGTGAGATGTACCGAATAAGAAACAAACTAGCTTCCAAAAGTTTCACTGCTGAGTGTGAGGCCTTGAAAAATATCAGACACCGTAATCTTGTGAAGGTACTCTCTACATGTTCGGGTACTGATTATCGTGGCTGTGATTTCAAGGCCTTAATTTATGAGTACATGGTTAATGGGAGCTTAGAGGAATGGTTGCATCCGCAGGAAATTAATGGCGTGAAAGATGAGAGGCAGGGGATCCTAAAGTTTTCTCAGAGGTTGAACATTGCCATTGACATTGCAATGGCATTGGAATATCTCCATTATCATTGTGAGACCCCGATAGTTCACTGCGATCTCAAGCCAAGTAATGTTCTTCTTGATGATGATATGGTTGGCCATGTGGGTGACTTTGGGTTGGTAAAATTCCTTCACAGAGCTTCTGATACTGTTTCTGGAGATCAATCAAGCTCCTTGGGAGTAAGAGGAACAATTGGTTATACTCCTCCAGAATATGGCATGGGACATGAAGTTTGGACACAAGGCGACGTGTACAGCTATGGCATCCTTCTGTTGCAAATGTTTACTGGAAGTAGACCAACCGATGACTTGTTTCAAGGAACTTCAAATATTCATAACTTTGTGAAGGAGGCTCTGCCTACACAAGTTCTAGAGATTGTGGATCCTGTTCTTGTTCAAGAAAAAATGGAGGGAGAGATGAGAAGAAACAATAATCTTAATGATGATAGCACAAGGGTTTCCAACAAAGTTCAAGAATGCTTGGCTACAATTTTAGAAATTGGTGTTGCTTGCTCCACAGAACTGTCTACAGCGCGGTTAGACATTAGTGATGTTGTTGCTGAGATGTGTCGAATAAGAAATAAATATCTAGCAAATAGAATTTGTGAATAG

Protein Analysis

1196

Amino Acids

132.53

Weight (kDa)

5.52

Isoelectric Point (pI)

35.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 28 - 66 2.7e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 76 - 153 3.2e-06 Leucine-rich repeat region
LRR_14 PF23598 138 - 261 3.6e-06 Leucine-rich repeat region
LRR_14 PF23598 309 - 410 1.4e-08 Leucine-rich repeat region
LRR_8 PF13855 468 - 526 9.6e-08 Leucine rich repeat
Pkinase PF00069 633 - 789 1.1e-18 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 634 - 785 3.1e-19 Protein tyrosine and serine/threonine kinase
PK_Tyr_Ser-Thr PF07714 908 - 1108 2.5e-27 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 912 - 1103 2.4e-27 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1569, 1938
Acc36I ACCTGC 1 cut(s) 240
Acc65I GGTACC 2 cut(s) 1588, 1788
AccB1I GGYRCC 2 cut(s) 1588, 1788
AccB7I CCANNNNNTGG 3 cut(s) 272, 344, 3194
AccI GTMKAC 3 cut(s) 202, 3274, 3506
AccII CGCG 1 cut(s) 3514
AciI CCGC 8 cut(s) 349, 547, 1254, 1655, 2552, 2570, 2900, 3514
AclWI GGATC 9 cut(s) 96, 125, 1936, 2522, 2535, 2932, 2945, 3356, 3369
AcoI YGGCCR 3 cut(s) 346, 2232, 3076
AcuI CTGAAG 2 cut(s) 304, 1052
AdeI CACNNNGTG 1 cut(s) 2390
AfiI CCNNNNNNNGG 4 cut(s) 272, 344, 1598, 3194
AflII CTTAAG 1 cut(s) 1850
AflIII ACRYGT 5 cut(s) 268, 2350, 2454, 2810, 3228
AhdI GACNNNNNGTC 1 cut(s) 235
AjiI CACGTC 1 cut(s) 3229
AjnI CCWGG 2 cut(s) 116, 1999
AjuI GAANNNNNNNTTGG 6 cut(s) 464, 496, 870, 902, 1428, 1460
Alw26I GTCTC 7 cut(s) 77, 1748, 1771, 2183, 2194, 2279, 3008
AlwI GGATC 9 cut(s) 96, 125, 1936, 2522, 2535, 2932, 2945, 3356, 3369
AlwNI CAGNNNCTG 2 cut(s) 2093, 2186
Ama87I CYCGRG 1 cut(s) 779
ApeKI GCWGC 4 cut(s) 26, 373, 376, 2495
ArsI GACNNNNNNTTYG 4 cut(s) 2361, 2393, 3195, 3227
AseI ATTAAT 1 cut(s) 2910
Asp700I GAANNNNTTC 2 cut(s) 1103, 1845
Asp718I GGTACC 2 cut(s) 1588, 1788
AspA2I CCTAGG 1 cut(s) 601
AspLEI GCGC 2 cut(s) 1775, 3514
AspS9I GGNCC 2 cut(s) 229, 659
AsuHPI GGTGA 6 cut(s) 140, 255, 410, 827, 2402, 3098
AvaI CYCGRG 1 cut(s) 779
AvaII GGWCC 2 cut(s) 229, 659
AvrII CCTAGG 1 cut(s) 601
BalI TGGCCA 2 cut(s) 2234, 3078
BamHI GGATCC 3 cut(s) 2527, 2937, 3361
BanI GGYRCC 2 cut(s) 1588, 1788
BanII GRGCYC 1 cut(s) 145
BarI GAAGNNNNNNTAC 4 cut(s) 1572, 1604, 3093, 3125
BauI CACGAG 1 cut(s) 220
BbsI GAAGAC 1 cut(s) 501
BbvCI CCTCAGC 1 cut(s) 2505
BbvI GCAGC 4 cut(s) 13, 363, 385, 2507
BccI CCATC 5 cut(s) 801, 1160, 1456, 1880, 2280
BciT130I CCWGG 2 cut(s) 118, 2001
BciVI GTATCC 1 cut(s) 1199
BcoDI GTCTC 7 cut(s) 77, 1748, 1771, 2183, 2194, 2279, 3008
BfaI CTAG 9 cut(s) 602, 695, 1202, 1910, 2639, 2673, 2732, 3350, 3569
BfmI CTRYAG 4 cut(s) 233, 377, 2661, 3507
BfrI CTTAAG 1 cut(s) 1850
BfuAI ACCTGC 1 cut(s) 240
BfuI GTATCC 1 cut(s) 1199
BisI GCNGC 5 cut(s) 27, 349, 374, 377, 2496
BlnI CCTAGG 1 cut(s) 601
BlsI GCNGC 5 cut(s) 28, 350, 375, 378, 2497
BmcAI AGTACT 2 cut(s) 1370, 1983
Bme1390I CCNGG 2 cut(s) 118, 2001
Bme18I GGWCC 2 cut(s) 229, 659
BmeRI GACNNNNNGTC 1 cut(s) 235
BmeT110I CYCGRG 1 cut(s) 779
BmgBI CACGTC 1 cut(s) 3229
BmgT120I GGNCC 2 cut(s) 229, 659
BmiI GGNNCC 8 cut(s) 142, 256, 1330, 1590, 1790, 2529, 2939, 3363
BmrFI CCNGG 2 cut(s) 118, 2001
BmsI GCATC 3 cut(s) 2176, 2905, 3252
BoxI GACNNNNGTC 1 cut(s) 2577
BpiI GAAGAC 1 cut(s) 501
BplI GAGNNNNNCTC 2 cut(s) 2206, 2238
BpmI CTGGAG 4 cut(s) 1385, 2022, 3156, 3171
Bpu10I CCTNAGC 1 cut(s) 2505
BpuEI CTTGAG 5 cut(s) 785, 841, 1786, 2233, 3023
BsaBI GATNNNNATC 2 cut(s) 1308, 2633
BsaI GGTCTC 2 cut(s) 2194, 3008
BsaJI CCNNGG 4 cut(s) 580, 601, 1435, 3153
BsaXI ACNNNNNCTCC 2 cut(s) 2147, 2177
Bsc4I CCNNNNNNNGG 4 cut(s) 272, 344, 1598, 3194
Bse1I ACTGG 7 cut(s) 99, 130, 178, 1330, 1592, 2424, 3271
Bse3DI GCAATG 5 cut(s) 909, 2565, 2964, 2976, 2988
Bse8I GATNNNNATC 2 cut(s) 1308, 2633
BseBI CCWGG 2 cut(s) 118, 2001
BseDI CCNNGG 4 cut(s) 580, 601, 1435, 3153
BseGI GGATG 8 cut(s) 516, 1223, 1696, 1996, 2167, 2515, 2896, 3243
BseJI GATNNNNATC 2 cut(s) 1308, 2633
BseLI CCNNNNNNNGG 4 cut(s) 272, 344, 1598, 3194
BseMI GCAATG 5 cut(s) 909, 2565, 2964, 2976, 2988
BseNI ACTGG 7 cut(s) 99, 130, 178, 1330, 1592, 2424, 3271
BseRI GAGGAG 1 cut(s) 3174
BseXI GCAGC 4 cut(s) 13, 363, 385, 2507
BsgI GTGCAG 1 cut(s) 338
Bsh1236I CGCG 1 cut(s) 3514
BshNI GGYRCC 2 cut(s) 1588, 1788
BsiHKCI CYCGRG 1 cut(s) 779
BslFI GGGAC 4 cut(s) 598, 1453, 2382, 3216
BslI CCNNNNNNNGG 4 cut(s) 272, 344, 1598, 3194
BsmAI GTCTC 7 cut(s) 77, 1748, 1771, 2183, 2194, 2279, 3008
BsmBI CGTCTC 2 cut(s) 77, 2279
BsmFI GGGAC 4 cut(s) 598, 1453, 2382, 3216
BsmI GAATGC 4 cut(s) 972, 1618, 2409, 3461
Bso31I GGTCTC 2 cut(s) 2194, 3008
BsoBI CYCGRG 1 cut(s) 779
Bsp1286I GDGCHC 1 cut(s) 145
Bsp1407I TGTACA 2 cut(s) 2397, 3231
BspACI CCGC 8 cut(s) 349, 547, 1254, 1655, 2552, 2570, 2900, 3514
BspFNI CGCG 1 cut(s) 3514
BspHI TCATGA 2 cut(s) 1213, 2542
BspLI GGNNCC 8 cut(s) 142, 256, 1330, 1590, 1790, 2529, 2939, 3363
BspMAI CTGCAG 3 cut(s) 237, 381, 2665
BspMI ACCTGC 1 cut(s) 240
BspPI GGATC 9 cut(s) 96, 125, 1936, 2522, 2535, 2932, 2945, 3356, 3369
BspQI GCTCTTC 1 cut(s) 618
BspT107I GGYRCC 2 cut(s) 1588, 1788
BspTI CTTAAG 1 cut(s) 1850
BspTNI GGTCTC 2 cut(s) 2194, 3008
BsrDI GCAATG 5 cut(s) 909, 2565, 2964, 2976, 2988
BsrGI TGTACA 2 cut(s) 2397, 3231
BsrI ACTGG 7 cut(s) 99, 130, 178, 1330, 1592, 2424, 3271
BssECI CCNNGG 4 cut(s) 580, 601, 1435, 3153
BssSI CACGAG 1 cut(s) 220
BssT1I CCWWGG 4 cut(s) 580, 601, 1435, 3153
Bst2BI CACGAG 1 cut(s) 220
Bst2UI CCWGG 2 cut(s) 118, 2001
Bst6I CTCTTC 2 cut(s) 618, 1700
BstAFI CTTAAG 1 cut(s) 1850
BstAPI GCANNNNNTGC 3 cut(s) 241, 361, 370
BstAUI TGTACA 2 cut(s) 2397, 3231
BstC8I GCNNGC 5 cut(s) 353, 1657, 1831, 2656, 3490
BstF5I GGATG 8 cut(s) 516, 1223, 1696, 1996, 2167, 2515, 2896, 3243
BstFNI CGCG 1 cut(s) 3514
BstHHI GCGC 2 cut(s) 1775, 3514
BstMAI GTCTC 7 cut(s) 77, 1748, 1771, 2183, 2194, 2279, 3008
BstMWI GCNNNNNNNGC 5 cut(s) 241, 361, 370, 2501, 2660
BstNI CCWGG 2 cut(s) 118, 2001
BstNSI RCATGY 5 cut(s) 272, 1420, 2354, 2458, 2814
BstPAI GACNNNNGTC 1 cut(s) 2577
BstSCI CCNGG 2 cut(s) 116, 1999
BstSFI CTRYAG 4 cut(s) 233, 377, 2661, 3507
BstUI CGCG 1 cut(s) 3514
BstV1I GCAGC 4 cut(s) 13, 363, 385, 2507
BstV2I GAAGAC 1 cut(s) 501
BstX2I RGATCY 3 cut(s) 2527, 2937, 3361
BstXI CCANNNNNNTGG 2 cut(s) 656, 728
BstYI RGATCY 3 cut(s) 2527, 2937, 3361
BsuI GTATCC 1 cut(s) 1199
BtrI CACGTC 1 cut(s) 3229
BtsCI GGATG 8 cut(s) 516, 1223, 1696, 1996, 2167, 2515, 2896, 3243
BtsI GCAGTG 4 cut(s) 1824, 1896, 2748, 3028
BtsIMutI CAGTG 8 cut(s) 185, 661, 1323, 1824, 1896, 2299, 2748, 3028
BveI ACCTGC 1 cut(s) 240
Cac8I GCNNGC 5 cut(s) 353, 1657, 1831, 2656, 3490
CaiI CAGNNNCTG 2 cut(s) 2093, 2186
CciI TCATGA 2 cut(s) 1213, 2542
CfoI GCGC 2 cut(s) 1775, 3514
Cfr13I GGNCC 2 cut(s) 229, 659
CseI GACGC 1 cut(s) 2296
DraI TTTAAA 1 cut(s) 1036
DraIII CACNNNGTG 1 cut(s) 2390
DriI GACNNNNNGTC 1 cut(s) 235
EaeI YGGCCR 3 cut(s) 346, 2232, 3076
Eam1104I CTCTTC 2 cut(s) 618, 1700
Eam1105I GACNNNNNGTC 1 cut(s) 235
EarI CTCTTC 2 cut(s) 618, 1700
Eco130I CCWWGG 4 cut(s) 580, 601, 1435, 3153
Eco147I AGGCCT 6 cut(s) 1011, 1512, 2120, 2602, 2765, 2849
Eco24I GRGCYC 1 cut(s) 145
Eco31I GGTCTC 2 cut(s) 2194, 3008
Eco32I GATATC 1 cut(s) 2323
Eco47I GGWCC 2 cut(s) 229, 659
Eco57I CTGAAG 2 cut(s) 304, 1052
Eco88I CYCGRG 1 cut(s) 779
EcoRI GAATTC 2 cut(s) 1523, 1541
EcoRII CCWGG 2 cut(s) 116, 1999
EcoRV GATATC 1 cut(s) 2323
EcoT14I CCWWGG 4 cut(s) 580, 601, 1435, 3153
EcoT22I ATGCAT 1 cut(s) 911
EcoT38I GRGCYC 1 cut(s) 145
ErhI CCWWGG 4 cut(s) 580, 601, 1435, 3153
Esp3I CGTCTC 2 cut(s) 77, 2279
FalI AAGNNNNNCTT 2 cut(s) 1932, 1964
FaqI GGGAC 4 cut(s) 598, 1453, 2382, 3216
FauI CCCGC 1 cut(s) 1648
FblI GTMKAC 3 cut(s) 202, 3274, 3506
Fnu4HI GCNGC 5 cut(s) 27, 349, 374, 377, 2496
FokI GGATG 8 cut(s) 503, 1210, 1683, 1983, 2154, 2522, 2883, 3230
FriOI GRGCYC 1 cut(s) 145
Fsp4HI GCNGC 5 cut(s) 27, 349, 374, 377, 2496
FspBI CTAG 9 cut(s) 602, 695, 1202, 1910, 2639, 2673, 2732, 3350, 3569
GlaI GCGC 2 cut(s) 1774, 3513
GluI GCNGC 5 cut(s) 27, 349, 374, 377, 2496
GsuI CTGGAG 4 cut(s) 1385, 2022, 3156, 3171
HgaI GACGC 1 cut(s) 2296
HhaI GCGC 2 cut(s) 1775, 3514
Hin6I GCGC 2 cut(s) 1773, 3512
HinP1I GCGC 2 cut(s) 1773, 3512
HincII GTYRAC 2 cut(s) 464, 1000
HindII GTYRAC 2 cut(s) 464, 1000
HindIII AAGCTT 5 cut(s) 1064, 1175, 1646, 2209, 2623
HinfI GANTC 6 cut(s) 67, 161, 586, 1764, 1835, 1890
HpaI GTTAAC 1 cut(s) 1000
HphI GGTGA 6 cut(s) 140, 255, 410, 827, 2402, 3098
Hpy99I CGWCG 1 cut(s) 3230
HpyCH4IV ACGT 3 cut(s) 2668, 2680, 3228
HpyF10VI GCNNNNNNNGC 5 cut(s) 241, 361, 370, 2501, 2660
HpySE526I ACGT 3 cut(s) 2668, 2680, 3228
HspAI GCGC 2 cut(s) 1773, 3512
KpnI GGTACC 2 cut(s) 1592, 1792
KspAI GTTAAC 1 cut(s) 1000
LguI GCTCTTC 1 cut(s) 618
LmnI GCTCC 8 cut(s) 140, 260, 1531, 2003, 2148, 2877, 3155, 3497
Lsp1109I GCAGC 4 cut(s) 13, 363, 385, 2507
LweI GCATC 3 cut(s) 2176, 2905, 3252
MaeI CTAG 9 cut(s) 602, 695, 1202, 1910, 2639, 2673, 2732, 3350, 3569
MaeII ACGT 3 cut(s) 2668, 2680, 3228
MaeIII GTNAC 8 cut(s) 190, 217, 436, 815, 1142, 1482, 2303, 3086
MfeI CAATTG 2 cut(s) 1673, 3171
MflI RGATCY 3 cut(s) 2527, 2937, 3361
MhlI GDGCHC 1 cut(s) 145
MlsI TGGCCA 2 cut(s) 2234, 3078
MluNI TGGCCA 2 cut(s) 2234, 3078
MlyI GAGTC 3 cut(s) 61, 580, 1773
MmeI TCCRAC 4 cut(s) 207, 253, 2195, 3465
Mox20I TGGCCA 2 cut(s) 2234, 3078
Mph1103I ATGCAT 1 cut(s) 911
MroXI GAANNNNTTC 2 cut(s) 1103, 1845
MscI TGGCCA 2 cut(s) 2234, 3078
MslI CAYNNNNRTG 3 cut(s) 2280, 2981, 3084
Msp20I TGGCCA 2 cut(s) 2234, 3078
MspA1I CMGCKG 3 cut(s) 26, 376, 1254
MspCI CTTAAG 1 cut(s) 1850
MspR9I CCNGG 2 cut(s) 118, 2001
MunI CAATTG 2 cut(s) 1673, 3171
Mva1269I GAATGC 4 cut(s) 972, 1618, 2409, 3461
MvaI CCWGG 2 cut(s) 118, 2001
MvnI CGCG 1 cut(s) 3514
MwoI GCNNNNNNNGC 5 cut(s) 241, 361, 370, 2501, 2660
NlaIV GGNNCC 8 cut(s) 142, 256, 1330, 1590, 1790, 2529, 2939, 3363
NmuCI GTSAC 4 cut(s) 217, 815, 2303, 3086
NsiI ATGCAT 1 cut(s) 911
NspI RCATGY 5 cut(s) 272, 1420, 2354, 2458, 2814
PagI TCATGA 2 cut(s) 1213, 2542
PceI AGGCCT 6 cut(s) 1011, 1512, 2120, 2602, 2765, 2849
PciI ACATGT 4 cut(s) 268, 2350, 2454, 2810
PciSI GCTCTTC 1 cut(s) 618
PctI GAATGC 4 cut(s) 972, 1618, 2409, 3461
PdmI GAANNNNTTC 2 cut(s) 1103, 1845
PfeI GAWTC 3 cut(s) 161, 1835, 1890
PflMI CCANNNNNTGG 3 cut(s) 272, 344, 3194
PfoI TCCNGGA 1 cut(s) 1999
PkrI GCNGC 5 cut(s) 28, 350, 375, 378, 2497
PleI GAGTC 3 cut(s) 61, 580, 1772
PpsI GAGTC 3 cut(s) 61, 580, 1772
PscI ACATGT 4 cut(s) 268, 2350, 2454, 2810
PshAI GACNNNNGTC 1 cut(s) 2577
PshBI ATTAAT 1 cut(s) 2910
PsiI TTATAA 2 cut(s) 1569, 1938
Psp6I CCWGG 2 cut(s) 116, 1999
PspGI CCWGG 2 cut(s) 116, 1999
PspN4I GGNNCC 8 cut(s) 142, 256, 1330, 1590, 1790, 2529, 2939, 3363
PspPI GGNCC 2 cut(s) 229, 659
PstI CTGCAG 3 cut(s) 237, 381, 2665
PstNI CAGNNNCTG 2 cut(s) 2093, 2186
PsuI RGATCY 3 cut(s) 2527, 2937, 3361
PvuII CAGCTG 2 cut(s) 26, 376
RseI CAYNNNNRTG 3 cut(s) 2280, 2981, 3084
SapI GCTCTTC 1 cut(s) 618
SatI GCNGC 5 cut(s) 27, 349, 374, 377, 2496
Sau96I GGNCC 2 cut(s) 229, 659
ScaI AGTACT 2 cut(s) 1370, 1983
SchI GAGTC 3 cut(s) 61, 580, 1773
ScrFI CCNGG 2 cut(s) 118, 2001
SduI GDGCHC 1 cut(s) 145
SfaNI GCATC 3 cut(s) 2176, 2905, 3252
SfcI CTRYAG 4 cut(s) 233, 377, 2661, 3507
SinI GGWCC 2 cut(s) 229, 659
SmiMI CAYNNNNRTG 3 cut(s) 2280, 2981, 3084
SmlI CTYRAG 6 cut(s) 764, 820, 1801, 1850, 2212, 3038
SmoI CTYRAG 6 cut(s) 764, 820, 1801, 1850, 2212, 3038
SseBI AGGCCT 6 cut(s) 1011, 1512, 2120, 2602, 2765, 2849
SsiI CCGC 8 cut(s) 349, 547, 1254, 1655, 2552, 2570, 2900, 3514
SspI AATATT 2 cut(s) 1117, 3310
SspMI CTAG 9 cut(s) 602, 695, 1202, 1910, 2639, 2673, 2732, 3350, 3569
StuI AGGCCT 6 cut(s) 1011, 1512, 2120, 2602, 2765, 2849
StyD4I CCNGG 2 cut(s) 116, 1999
StyI CCWWGG 4 cut(s) 580, 601, 1435, 3153
TaiI ACGT 3 cut(s) 2671, 2683, 3231
TaqI TCGA 6 cut(s) 91, 492, 527, 624, 2196, 3550
TatI WGTACW 5 cut(s) 1368, 1981, 2397, 2862, 3231
TauI GCSGC 1 cut(s) 351
TfiI GAWTC 3 cut(s) 161, 1835, 1890
TscAI CASTG 8 cut(s) 185, 661, 1330, 1831, 1903, 2306, 2755, 3035
TseFI GTSAC 4 cut(s) 217, 815, 2303, 3086
TseI GCWGC 4 cut(s) 26, 373, 376, 2495
Tsp45I GTSAC 4 cut(s) 217, 815, 2303, 3086
TspGWI ACGGA 1 cut(s) 101
TspRI CASTG 8 cut(s) 185, 661, 1330, 1831, 1903, 2306, 2755, 3035
Van91I CCANNNNNTGG 3 cut(s) 272, 344, 3194
Vha464I CTTAAG 1 cut(s) 1850
VpaK11BI GGWCC 2 cut(s) 229, 659
VspI ATTAAT 1 cut(s) 2910
XbaI TCTAGA 1 cut(s) 3349
XceI RCATGY 5 cut(s) 272, 1420, 2354, 2458, 2814
XcmI CCANNNNNNNNNTGG 2 cut(s) 800, 1274
XmaJI CCTAGG 1 cut(s) 601
XmiI GTMKAC 3 cut(s) 202, 3274, 3506
XmnI GAANNNNTTC 2 cut(s) 1103, 1845
XspI CTAG 9 cut(s) 602, 695, 1202, 1910, 2639, 2673, 2732, 3350, 3569
ZrmI AGTACT 2 cut(s) 1370, 1983
Zsp2I ATGCAT 1 cut(s) 911
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.