Rmu_sc0001001.1_g000015
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001001.1
Physical Location & Seq
Reverse (-)
87370 .. 90606
3237 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001001.1_g000015.1.cds

Sequence Viewer

Length: 3120 bp
atgatcatcactttggcctcttcaaatctaagagggaatgaggtggaacgacgatccttgcttgcctttaaatctgaaatattcagtgatcctctgggcatccttagctcctggaatgattcctccaacttatgtgatgagtggcgagggattacttgcggccgcacacaccagcgagtcactgttctggacctccagtcaagccagctgaagggtatcctaacttcacacatcggaaacttgagctttctcaggacattaaatctccaaaacaatagcttcaacggcaccatccctcaagaagttggtcgattgtttcggctgcaacgactacacctcggggacaacttcttcaaaggtgacatccccatcaatatatctcattgttttaatctccaatatcttgtcttggctaataacactcttagtgggaaacttccactggaacttggctcattgttcaagcttcgagtacttactttgcgtaggaacaatttagttggggaaattccatcttcttatggaaatctttcttatcttcaaattctttctctggaagaaaatattctgtatggtggtctcttgagtagccgccttggggaattaaaaagcttaagatatctcgcattgggtacaaatagattgactggtaccatccctctctccatatacaacctttcttccattgaacacatttctgtgataggaaaccaatttcatggaactcttccttctgggttgggccgcactatatttccaaaacttcaaacctttcatttccaaatgaacagattcagcggaccaattccatttacaatctcaaacgcatcccacctttcacagtttttgatctctaataataattttaccggaaaagttcctagtctggcaagagtttccaatctgtttcggttggaaatgggtgataataatcttataaatgaggatggtgacttggattttctctcttctctggttaattgtaccagtttagaacgtgtaaatattagtgggaataattttcaaggagtgctacctgaatctatcagcaatttctcaacaaagctcaaggtaataagtttaggaaggaatcagctacgtggaagcattcccattgcgataggaaatctcatcaacttgtttgtattgagcttcgaggaaaacctattgacaggccctatacccagttcaatatgcaagccaagtaaattgtacgatctgtgtataaaccataatcagttatcaggtactatcccatcttgtttggtaaatctaacttggttaagcatattagatctcaagtcaaacaacttacaaggaggcataccaaaaagtcttggtcaatgcaagaatttgctagctttggttctttctcaaaataaacttaacggttctattccgcaagaagtcatcggttcatcatctttatcactagttttggatttatccagtaaccaatttactggttacattcccagtgaagtaggtaatctgtcgagacttgtttctttgaatctttctgaaaatagattatctggtgagattccactaagcttactgggattcacaaatttgataagtttgcacctgaatggaaacatgttgcatgggagaattcttgaatatttgagttcttcgtggcagattcaagattttgacgtctctcgtaacaacttctctggaacaattcccgattatttgcagaatttcaccttcttgctcaatttgaacctatcctttaataattttgaaggtgaagtaccaaatgaaggagtgtttaggaatacaagtgtggtttctctcatgggaaacagaggagtactttgtggaggtgtacctcagttgaacttgcctaaatgtaggcctaacctaagtgacttgtctaagaaaaaatcgtcgaagaaaaaatcgtcgaagaaaaaatcgtctaagaaaaaatcgtctaagaaaaaatcgtcttttctgctgatattagtcatcttagttttttctttgtccagtttgatgttgtgctgtctgctcctttatagatcaaagaaaaggaaagcaaaagttgagtcaacttggatacaaatgttggatatttcacccttaaaactgtcctatggtgatctcctaaaagcaactgatggcttctcttctcggaatttgattggctctggtagttctggttctgtgtattggggagttcttgatcaacaggaggaaacaattgttgctgtgaaagtactcaaccttcaaagttcaagagcttctagaagttttgtagctgaatgtaaagtcctgaaaagcattaggcaccgaaatcttgttaaactagtgactgcttgctcaagtattgattttcaaggaaatgaattcaaagctttggtttttgagttcatgttggatggaaatctagatgaaatgttgcattattcagctcattcagtggttggggtgcccaatgtgcaggtgcatttgaatcttatccaaagggtaaatattgccattgatgtagctaatgctttggattatttgcacagttgctttcacatcccgatagttcattgtgatttaaagccgagtaatgttctcctagaaaaggacatgactgcccgtgtctgtgattttgggttagcaacctacctcccagatgcttcttcactagagagttcttccaatataataagggggtccatcggatattttcccccagagtatggcatgggaggtgcggtctcaacgtatggggacgtgtatagctacggaatcttggtactggagatgcttactggtaagaggccaacagatgatatgtttacagatgacatgaacttgcacaattttgttctgatggctttgcctgaacgtgtgaaagaaatatgtgatccggtgcttgttcaagaaaaggaaagcagcactagtacaaatcctgcatgcaataggaatgatgtccaaactgatgaaacacgaagagttgaagagtgccttatttccattgctaggataggagttgggtgttctgtgcattttcccaaagcacgaatggagattggagaagttgtagctgaattacgtgtaatcagggatgtactgactggaaccaggatgcctagagagcacatgaacactacctaa

Protein Analysis

1039

Amino Acids

114.88

Weight (kDa)

8.84

Isoelectric Point (pI)

37.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 938
AarI CACCTGC 1 cut(s) 2443
AatII GACGTC 1 cut(s) 1662
Acc36I ACCTGC 1 cut(s) 2443
Acc65I GGTACC 1 cut(s) 650
AccB1I GGYRCC 4 cut(s) 287, 650, 2298, 2440
AccB7I CCANNNNNTGG 1 cut(s) 2702
AciI CCGC 7 cut(s) 159, 163, 592, 745, 798, 1400, 2717
AclWI GGATC 3 cut(s) 48, 83, 2864
AcoI YGGCCR 1 cut(s) 160
AcsI RAATTY 8 cut(s) 507, 543, 1351, 1570, 1614, 1705, 2146, 2357
AcuI CTGAAG 1 cut(s) 230
AcyI GRCGYC 1 cut(s) 1659
AfiI CCNNNNNNNGG 6 cut(s) 211, 598, 1769, 2584, 2702, 2985
AflII CTTAAG 1 cut(s) 613
AflIII ACRYGT 5 cut(s) 997, 1599, 2736, 2851, 3058
AhdI GACNNNNNGTC 1 cut(s) 196
AhlI ACTAGT 3 cut(s) 1432, 2317, 2903
AjiI CACGTC 1 cut(s) 2737
AjnI CCWGG 2 cut(s) 110, 3086
Alw21I GWGCWC 1 cut(s) 3105
Alw26I GTCTC 4 cut(s) 584, 1492, 1666, 2725
AlwI GGATC 3 cut(s) 48, 83, 2864
Ama87I CYCGRG 1 cut(s) 338
AoxI GGCC 6 cut(s) 15, 160, 742, 1174, 1862, 2783
ApeKI GCWGC 2 cut(s) 322, 2898
ApoI RAATTY 8 cut(s) 507, 543, 1351, 1570, 1614, 1705, 2146, 2357
ArsI GACNNNNNNTTYG 2 cut(s) 2042, 2074
Asp700I GAANNNNTTC 3 cut(s) 529, 564, 791
Asp718I GGTACC 1 cut(s) 650
AspS9I GGNCC 5 cut(s) 190, 742, 800, 1175, 2676
AsuHPI GGTGA 8 cut(s) 371, 935, 962, 1550, 1702, 1766, 2079, 2120
AsuNHI GCTAGC 1 cut(s) 1357
AvaI CYCGRG 1 cut(s) 338
AvaII GGWCC 3 cut(s) 190, 800, 2676
BaeGI GKGCMC 1 cut(s) 2445
BaeI ACNNNNGTAYC 2 cut(s) 2060, 2093
BanI GGYRCC 4 cut(s) 287, 650, 2298, 2440
BarI GAAGNNNNNNTAC 6 cut(s) 208, 240, 1743, 1775, 2220, 2252
Bbv12I GWGCWC 1 cut(s) 3105
BbvI GCAGC 2 cut(s) 309, 2910
BceAI ACGGC 1 cut(s) 301
BciT130I CCWGG 2 cut(s) 112, 3088
BciVI GTATCC 2 cut(s) 227, 2061
BclI TGATCA 2 cut(s) 3, 2194
BcoDI GTCTC 4 cut(s) 584, 1492, 1666, 2725
BcuI ACTAGT 3 cut(s) 1432, 2317, 2903
BfrI CTTAAG 1 cut(s) 613
BfuAI ACCTGC 1 cut(s) 2443
BfuI GTATCC 2 cut(s) 227, 2061
BglII AGATCT 1 cut(s) 1294
BisI GCNGC 6 cut(s) 160, 163, 323, 592, 745, 2899
BlsI GCNGC 6 cut(s) 161, 164, 324, 593, 746, 2900
BmcAI AGTACT 3 cut(s) 474, 1821, 2229
Bme1390I CCNGG 2 cut(s) 112, 3088
Bme18I GGWCC 3 cut(s) 190, 800, 2676
BmeRI GACNNNNNGTC 1 cut(s) 196
BmeT110I CYCGRG 1 cut(s) 338
BmgBI CACGTC 1 cut(s) 2737
BmgT120I GGNCC 5 cut(s) 190, 742, 800, 1175, 2676
BmiI GGNNCC 6 cut(s) 289, 652, 2300, 2442, 2677, 3085
BmrFI CCNGG 2 cut(s) 112, 3088
BmrI ACTGGG 3 cut(s) 1179, 1470, 1568
BmsI GCATC 5 cut(s) 108, 836, 2626, 2757, 3081
BmtI GCTAGC 1 cut(s) 1361
BmuI ACTGGG 3 cut(s) 1179, 1470, 1568
BpmI CTGGAG 2 cut(s) 179, 2783
Bpu10I CCTNAGC 1 cut(s) 104
BpuEI CTTGAG 6 cut(s) 262, 282, 604, 1052, 1283, 2317
BsaAI YACGTR 2 cut(s) 1100, 3059
BsaBI GATNNNNATC 2 cut(s) 930, 2394
BsaHI GRCGYC 1 cut(s) 1659
BsaI GGTCTC 2 cut(s) 584, 2725
BsaJI CCNNGG 2 cut(s) 337, 595
BsaWI WCCGGW 2 cut(s) 869, 2872
BsaXI ACNNNNNCTCC 4 cut(s) 2703, 2733, 3030, 3060
Bsc4I CCNNNNNNNGG 6 cut(s) 211, 598, 1769, 2584, 2702, 2985
Bse3DI GCAATG 2 cut(s) 1113, 2979
Bse8I GATNNNNATC 2 cut(s) 930, 2394
BseBI CCWGG 2 cut(s) 112, 3088
BseDI CCNNGG 2 cut(s) 337, 595
BseJI GATNNNNATC 2 cut(s) 930, 2394
BseLI CCNNNNNNNGG 6 cut(s) 211, 598, 1769, 2584, 2702, 2985
BseMI GCAATG 2 cut(s) 1113, 2979
BseMII CTCAG 2 cut(s) 265, 1853
BseRI GAGGAG 1 cut(s) 1830
BseSI GKGCMC 1 cut(s) 2445
BseX3I CGGCCG 1 cut(s) 160
BseXI GCAGC 2 cut(s) 309, 2910
BsgI GTGCAG 1 cut(s) 2471
Bsh1285I CGRYCG 1 cut(s) 163
BshFI GGCC 6 cut(s) 17, 162, 744, 1176, 1864, 2785
BshNI GGYRCC 4 cut(s) 287, 650, 2298, 2440
BsiEI CGRYCG 1 cut(s) 163
BsiHKAI GWGCWC 1 cut(s) 3105
BsiHKCI CYCGRG 1 cut(s) 338
BsiSI CCGG 2 cut(s) 870, 2873
BslFI GGGAC 2 cut(s) 356, 2747
BslI CCNNNNNNNGG 6 cut(s) 211, 598, 1769, 2584, 2702, 2985
BsmAI GTCTC 4 cut(s) 584, 1492, 1666, 2725
BsmBI CGTCTC 1 cut(s) 1666
BsmFI GGGAC 2 cut(s) 356, 2747
BsmI GAATGC 1 cut(s) 1107
BsnI GGCC 6 cut(s) 17, 162, 744, 1176, 1864, 2785
Bso31I GGTCTC 2 cut(s) 584, 2725
BsoBI CYCGRG 1 cut(s) 338
Bsp1286I GDGCHC 2 cut(s) 2445, 3105
BspACI CCGC 7 cut(s) 159, 163, 592, 745, 798, 1400, 2717
BspANI GGCC 6 cut(s) 17, 162, 744, 1176, 1864, 2785
BspCNI CTCAG 2 cut(s) 264, 1852
BspLI GGNNCC 6 cut(s) 289, 652, 2300, 2442, 2677, 3085
BspMI ACCTGC 1 cut(s) 2443
BspOI GCTAGC 1 cut(s) 1361
BspPI GGATC 3 cut(s) 48, 83, 2864
BspT107I GGYRCC 4 cut(s) 287, 650, 2298, 2440
BspTI CTTAAG 1 cut(s) 613
BspTNI GGTCTC 2 cut(s) 584, 2725
BsrDI GCAATG 2 cut(s) 1113, 2979
BssECI CCNNGG 2 cut(s) 337, 595
BssNI GRCGYC 1 cut(s) 1659
BssT1I CCWWGG 1 cut(s) 595
Bst2UI CCWGG 2 cut(s) 112, 3088
Bst4CI ACNGT 5 cut(s) 184, 843, 1391, 2100, 2525
Bst6I CTCTTC 6 cut(s) 25, 732, 973, 2143, 2950, 2958
BstACI GRCGYC 1 cut(s) 1659
BstAFI CTTAAG 1 cut(s) 613
BstBAI YACGTR 2 cut(s) 1100, 3059
BstC8I GCNNGC 6 cut(s) 63, 206, 1199, 1359, 2329, 2920
BstENI CCTNNNNNAGG 1 cut(s) 2582
BstMAI GTCTC 4 cut(s) 584, 1492, 1666, 2725
BstMCI CGRYCG 1 cut(s) 163
BstMWI GCNNNNNNNGC 4 cut(s) 105, 285, 2449, 3100
BstNI CCWGG 2 cut(s) 112, 3088
BstNSI RCATGY 2 cut(s) 1603, 2922
BstSCI CCNGG 2 cut(s) 110, 3086
BstSLI GKGCMC 1 cut(s) 2445
BstV1I GCAGC 2 cut(s) 309, 2910
BstX2I RGATCY 1 cut(s) 1294
BstXI CCANNNNNNTGG 2 cut(s) 719, 1463
BstYI RGATCY 1 cut(s) 1294
BstZI CGGCCG 1 cut(s) 160
BsuI GTATCC 2 cut(s) 227, 2061
BsuRI GGCC 6 cut(s) 17, 162, 744, 1176, 1864, 2785
BtrI CACGTC 1 cut(s) 2737
BtsIMutI CAGTG 5 cut(s) 91, 180, 440, 1483, 2436
BveI ACCTGC 1 cut(s) 2443
Cac8I GCNNGC 6 cut(s) 63, 206, 1199, 1359, 2329, 2920
CciNI GCGGCCGC 1 cut(s) 160
Cfr13I GGNCC 5 cut(s) 190, 742, 800, 1175, 2676
DraI TTTAAA 2 cut(s) 70, 2559
DriI GACNNNNNGTC 1 cut(s) 196
EaeI YGGCCR 1 cut(s) 160
EagI CGGCCG 1 cut(s) 160
Eam1104I CTCTTC 6 cut(s) 25, 732, 973, 2143, 2950, 2958
Eam1105I GACNNNNNGTC 1 cut(s) 196
EarI CTCTTC 6 cut(s) 25, 732, 973, 2143, 2950, 2958
EclXI CGGCCG 1 cut(s) 160
Eco130I CCWWGG 1 cut(s) 595
Eco147I AGGCCT 1 cut(s) 1864
Eco31I GGTCTC 2 cut(s) 584, 2725
Eco32I GATATC 1 cut(s) 620
Eco47I GGWCC 3 cut(s) 190, 800, 2676
Eco52I CGGCCG 1 cut(s) 160
Eco57I CTGAAG 1 cut(s) 230
Eco88I CYCGRG 1 cut(s) 338
EcoNI CCTNNNNNAGG 1 cut(s) 2582
EcoO109I RGGNCCY 1 cut(s) 1175
EcoRI GAATTC 2 cut(s) 1614, 2357
EcoRII CCWGG 2 cut(s) 110, 3086
EcoRV GATATC 1 cut(s) 620
EcoT14I CCWWGG 1 cut(s) 595
ErhI CCWWGG 1 cut(s) 595
Esp3I CGTCTC 1 cut(s) 1666
FalI AAGNNNNNCTT 2 cut(s) 2955, 2987
FaqI GGGAC 2 cut(s) 356, 2747
FbaI TGATCA 2 cut(s) 3, 2194
Fnu4HI GCNGC 6 cut(s) 160, 163, 323, 592, 745, 2899
Fsp4HI GCNGC 6 cut(s) 160, 163, 323, 592, 745, 2899
GluI GCNGC 6 cut(s) 160, 163, 323, 592, 745, 2899
GsuI CTGGAG 2 cut(s) 179, 2783
HaeIII GGCC 6 cut(s) 17, 162, 744, 1176, 1864, 2785
HapII CCGG 2 cut(s) 870, 2873
Hin1I GRCGYC 1 cut(s) 1659
HincII GTYRAC 1 cut(s) 2061
HindII GTYRAC 1 cut(s) 2061
HindIII AAGCTT 4 cut(s) 464, 610, 1552, 2364
HpaII CCGG 2 cut(s) 870, 2873
HphI GGTGA 8 cut(s) 371, 935, 962, 1550, 1702, 1766, 2079, 2120
Hpy166II GTNNAC 3 cut(s) 1835, 2061, 2802
Hpy188I TCNGA 6 cut(s) 76, 236, 1522, 2145, 2684, 2835
Hpy8I GTNNAC 3 cut(s) 1835, 2061, 2802
Hpy99I CGWCG 3 cut(s) 54, 1900, 1915
HpyAV CCTTC 7 cut(s) 205, 741, 1080, 1723, 1745, 1763, 2246
HpyCH4III ACNGT 5 cut(s) 184, 843, 1391, 2100, 2525
HpyCH4IV ACGT 7 cut(s) 997, 1099, 1659, 2726, 2736, 2851, 3058
HpyF10VI GCNNNNNNNGC 4 cut(s) 105, 285, 2449, 3100
HpySE526I ACGT 7 cut(s) 997, 1099, 1659, 2726, 2736, 2851, 3058
Hsp92I GRCGYC 1 cut(s) 1659
KpnI GGTACC 1 cut(s) 654
Ksp22I TGATCA 2 cut(s) 3, 2194
LmnI GCTCC 2 cut(s) 113, 2025
Lsp1109I GCAGC 2 cut(s) 309, 2910
LweI GCATC 5 cut(s) 108, 836, 2626, 2757, 3081
MaeII ACGT 7 cut(s) 997, 1099, 1659, 2726, 2736, 2851, 3058
MaeIII GTNAC 8 cut(s) 178, 359, 950, 1451, 1466, 1667, 1874, 2320
MfeI CAATTG 1 cut(s) 2211
MflI RGATCY 1 cut(s) 1294
MhlI GDGCHC 2 cut(s) 2445, 3105
MlyI GAGTC 2 cut(s) 186, 2066
MmeI TCCRAC 4 cut(s) 150, 894, 2058, 2367
MroXI GAANNNNTTC 3 cut(s) 529, 564, 791
MslI CAYNNNNRTG 2 cut(s) 698, 1590
MspA1I CMGCKG 2 cut(s) 208, 798
MspCI CTTAAG 1 cut(s) 613
MspI CCGG 2 cut(s) 870, 2873
MspR9I CCNGG 2 cut(s) 112, 3088
MunI CAATTG 1 cut(s) 2211
Mva1269I GAATGC 1 cut(s) 1107
MvaI CCWGG 2 cut(s) 112, 3088
MwoI GCNNNNNNNGC 4 cut(s) 105, 285, 2449, 3100
NheI GCTAGC 1 cut(s) 1357
NlaIV GGNNCC 6 cut(s) 289, 652, 2300, 2442, 2677, 3085
NmeAIII GCCGAG 1 cut(s) 2589
NmuCI GTSAC 5 cut(s) 178, 359, 950, 1874, 2320
NotI GCGGCCGC 1 cut(s) 160
NspI RCATGY 2 cut(s) 1603, 2922
PaeI GCATGC 1 cut(s) 2922
PaqCI CACCTGC 1 cut(s) 2443
PceI AGGCCT 1 cut(s) 1864
PciI ACATGT 1 cut(s) 1599
PcsI WCGNNNNNNNCGW 1 cut(s) 325
PctI GAATGC 1 cut(s) 1107
PdmI GAANNNNTTC 3 cut(s) 529, 564, 791
PflMI CCANNNNNTGG 1 cut(s) 2702
PfoI TCCNGGA 1 cut(s) 110
PkrI GCNGC 6 cut(s) 161, 164, 324, 593, 746, 2900
PleI GAGTC 2 cut(s) 185, 2065
PpsI GAGTC 2 cut(s) 185, 2065
Ppu21I YACGTR 2 cut(s) 1100, 3059
PscI ACATGT 1 cut(s) 1599
PsiI TTATAA 1 cut(s) 938
Psp6I CCWGG 2 cut(s) 110, 3086
PspGI CCWGG 2 cut(s) 110, 3086
PspN4I GGNNCC 6 cut(s) 289, 652, 2300, 2442, 2677, 3085
PspPI GGNCC 5 cut(s) 190, 742, 800, 1175, 2676
PsrI GAACNNNNNNTAC 2 cut(s) 2155, 2187
PsuI RGATCY 1 cut(s) 1294
PvuII CAGCTG 1 cut(s) 208
RseI CAYNNNNRTG 2 cut(s) 698, 1590
SatI GCNGC 6 cut(s) 160, 163, 323, 592, 745, 2899
Sau96I GGNCC 5 cut(s) 190, 742, 800, 1175, 2676
ScaI AGTACT 3 cut(s) 474, 1821, 2229
SchI GAGTC 2 cut(s) 186, 2066
ScrFI CCNGG 2 cut(s) 112, 3088
SduI GDGCHC 2 cut(s) 2445, 3105
SfaNI GCATC 5 cut(s) 108, 836, 2626, 2757, 3081
SinI GGWCC 3 cut(s) 190, 800, 2676
SmiMI CAYNNNNRTG 2 cut(s) 698, 1590
SmlI CTYRAG 7 cut(s) 241, 297, 583, 613, 1067, 1298, 2332
SmoI CTYRAG 7 cut(s) 241, 297, 583, 613, 1067, 1298, 2332
SpeI ACTAGT 3 cut(s) 1432, 2317, 2903
SphI GCATGC 1 cut(s) 2922
SseBI AGGCCT 1 cut(s) 1864
SsiI CCGC 7 cut(s) 159, 163, 592, 745, 798, 1400, 2717
SspI AATATT 5 cut(s) 81, 565, 1006, 1625, 2485
StuI AGGCCT 1 cut(s) 1864
StyD4I CCNGG 2 cut(s) 110, 3086
StyI CCWWGG 1 cut(s) 595
TaaI ACNGT 5 cut(s) 184, 843, 1391, 2100, 2525
TaiI ACGT 7 cut(s) 1000, 1102, 1662, 2729, 2739, 2854, 3061
TaqI TCGA 6 cut(s) 310, 469, 1155, 1496, 1898, 1913
TatI WGTACW 5 cut(s) 472, 1819, 2227, 2906, 3073
TauI GCSGC 4 cut(s) 162, 165, 594, 747
TscAI CASTG 5 cut(s) 91, 187, 447, 1483, 2436
TseFI GTSAC 5 cut(s) 178, 359, 950, 1874, 2320
TseI GCWGC 2 cut(s) 322, 2898
Tsp45I GTSAC 5 cut(s) 178, 359, 950, 1874, 2320
TspGWI ACGGA 1 cut(s) 2763
TspRI CASTG 5 cut(s) 91, 187, 447, 1483, 2436
Van91I CCANNNNNTGG 1 cut(s) 2702
Vha464I CTTAAG 1 cut(s) 613
VpaK11BI GGWCC 3 cut(s) 190, 800, 2676
XagI CCTNNNNNAGG 1 cut(s) 2582
XapI RAATTY 8 cut(s) 507, 543, 1351, 1570, 1614, 1705, 2146, 2357
XbaI TCTAGA 2 cut(s) 2255, 2398
XceI RCATGY 2 cut(s) 1603, 2922
XcmI CCANNNNNNNNNTGG 1 cut(s) 3025
XmnI GAANNNNTTC 3 cut(s) 529, 564, 791
ZraI GACGTC 1 cut(s) 1660
ZrmI AGTACT 3 cut(s) 474, 1821, 2229
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.