Rw1G022890
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Reverse (-)
48432857 .. 48436067
3211 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G022890.1

Sequence Viewer

Length: 3081 bp
ATGGGGGGAGTTTTGGTTATGAAATTGGTTTTGATATACTCTTTAGTTTTAAATTCCATGTCCATTTTCTGTTGTAGCTCCATGCAATTGAACCATCCGAGACTCGAAGGGAATGAGACGGATAGGCTGGCATTGCTAGCAATCAAAGCTCAAATACAACACGATCCGAACCGGGTCACAAGCTCATGGAATGAAACCCTTCACTTTTGCCTGTGGCACGGCGTCACCTGCAGTCGACGACATCGCCAAAGGGTGACAAAGCTGGAGCTGGGCTCTCTAGCGTTGGTGGGATCCATACCTCCACACATCGGAAATCTAAGCTTCTTAAGAGTGCTAATTCTCGAGAACAACAGCTTCACTCTTCAAATCCCTCCTCAAATTGGCCGTTTGCACAGATTGCAGGTATTGCATCTAAACAATAACTCACTTACAGGCACCATTCCTGCCAATATATCCAATTGCTTTGAACTCATCAGTCTCTTTCTTAGAAGAAACAATCTAGTGGGTAAAATTCCTCCTAAATTGAGTTCCTTGTCAAAGCTTCAAGCTTTAAGATTGGGAGCCAACAATTTAACAGGAGAGATCCCTCCTTCTTTGGGGAACCTTTCATCTCTCGTGATGTTTTCATCAACTTCGAGTAACTTAGAAGGAAGCATCCCTAGTTCCCTATGCCAGTTGAAAAGATTAATAGATTTCTATTTGGACTTAAATAGGTTATCTGGTATCATCCCTTCCTGCATTTACAACCTCTCTGGTATAGTTACTTTCGGCGTAGGAGGAAACCAACTTCAAGGAAGTCTTCCATCAAACTTGAGCAATGCTTTTCCCAACCTTCAAATGTTTTCCGTTGCCGACAATCAATTTACTGGGGCCATCCCTTCCTCAATATCCAAGGCAACAAATCTTGTGCTGTTTCAATGTTCGTCAAACAAACTCTCTGGACAGGTGCCAAATTTACGAAATCTTCATAACCTTAGACTATTCTTTGTCGAATATAATAATCTTGGAAGCGGTAAAGATGGTGACTTGAGTTTTGTCTCAGAATTGATCAATGCCACACATTTAAATATATTGGGGTTCCACGGCAACAATTTTGGAGGCACGTTGCCCACATCAATATCCAATCTCTCAATCAATCTCCAGTGGCTTGGAATTGGAGGAAACCACCTACATGGAAGCATCCCAACTGGATTAGGGAATCTTGTAAACCTGCAATTACTCAATATGGCTGGAAACTCCTTCACAGGTAGCATCCCCACAGACATTGGGCAGCTTTCAGGGCTTGGGCAATTGAATCTTGAAAACAACCAATTATCAGGAAGCATTCCATCTTCTCTTGGAAATTTAACATTGTTAGCAATTCTCCAATTGCAAGAAAATAATCTAGAGGGTAGCATCCCGTCCAGCCTAGGGAAATTCCGCTGGTTAAACTCATTGCTTCTTTCTGGAAACAATCTAAATGGCACGATACCGCCCCAAGTTATTGGTCTCTCATCTTTGTCAACAACTTTGGCATTGGATAGAAACCAATTCACTGGTTCCCTTCCTACGGAGATTGGAAAATTGAAGAATCTACGTGTATTGACAGTTTCTGACAACTTGTTATCAGGAGAACTTCCCAGTAGCCTCGGCAGTTGCGAGAGCTTAGAAGAACTATACTTGCAAGGCAACTTCTTCTTGGGACCCATTCCTTCATCTATGAAAGAATTGAGAGGGATTCGAGTTTTAGACCTTTCTCGCAACAATTTGTCAGGAGATATTCCACAATTTCTTGAGAATCTGAACTTGGATTACCTGAATCTCTCCTTCAACCAGTTTTGGGGAGCAGTACCAACTGGCGGTGTCTTTAAGAATGCAAGTGTGACTTCAGTCGCTGGAAATGCTAGACTCTGCGGAGGTATGACTAGTCTTCAACTTCCTCTGTGTAAGCTTAATGAGTCTAAAGGAGAAGGGCTCTCTCATAGAATGAAACTTATGATCTCTTTAGTCTCCGGGTTCACTCTTTTGGGACTGGTTGTGGTGCTGTCTCTTTTTCTTCTTGGTAAGAAAAGGAAAGAAACTAATTTAAGCACTTTGGGGAACTCTGGTTTGCAAGTTTCATATGCTACACTCCTCAGAGCTACTGATGGTTTTTCGTTGGCTAATTTGATCGGTGTGGGTGCTTTTGGGTCTGTGTACAAAGGAATCCTTGCTGATGATAGAGTTGTTGTCGCTGTGAAGGTGCTTAACATGTTACACAGGGGAGCATCTAAGAGTTTCATGGCCGAATGTGAGGCATTGAGAAATATCAGACATCGAAATCTGGTCAAGCTCTTAACTGCATGTTCAAGTATTGATTTCAGCGGCAATGATTTCAAGGCCCTTGTTTACGAGTTCATGGACAACGGGAGCTTGGAAGAGTGGTTGCATCCATCTATTGGAACTGGAGAGGTAACAGAAGCACCCAAAATTTTAAGTCTTAATCAGAGGCTCAACATTGCCATTGATGTTGCTAGTGCATTGGACTATCTTCACAACCATTGTGAGACACCGATCGTTCATTGTGATCTCAAGCCAAGTAATGTTCTTCTGGATGGTGACCTGACTGGACATGTTTCCGACTTTGGGCTGTCAAAGTTTCTCTCAGAACCAACCACTAGTGTTTCTGGAAATCAATCAAGCTCCATTGGAATTAGAGGATCGGTTGGCTATGCTGCACCAGAGTATGGTATGGGAAGTGAGGTATCCACATACGGGGATATCTACAGCTTCGGCATTCTTTTGTTAGAAATGTTTACGGGGAAGCGACCCACTGATCACATGTTCAATGCTAGCTTGAATCTTCATAATTATGTAAAGACAGCTCTCCCTGAACTGGTTTCAGAGATTTCAGAATCACTAGTTCTTCAAGAAGGCACCACCAATGTCGCTGAAGCTCACAGGCACAGCCGATTGAGTGTGAGAGCACAGAAAATTGAAGAGTGCTTGACTCTGATACTTGGTATAGGAATTGCATGTTCTGTTGAATCCCCCACAAACAGAAAGGATATCAGTGATGCTGCAACTGAATTGCAATCCATTAGGCGCAATCTTCTCAACTAG

Protein Analysis

1026

Amino Acids

110.78

Weight (kDa)

7.6

Isoelectric Point (pI)

34.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 39 - 78 2.5e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 101 - 185 1.1e-07 Leucine-rich repeat region
LRR_14 PF23598 379 - 478 5e-07 Leucine-rich repeat region
LRR_14 PF23598 512 - 594 2.7e-06 Leucine-rich repeat region
PK_Tyr_Ser-Thr PF07714 713 - 939 1.8e-38 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 713 - 944 2e-38 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 236
Acc36I ACCTGC 3 cut(s) 236, 391, 1218
AccB1I GGYRCC 3 cut(s) 434, 946, 2894
AccB7I CCANNNNNTGG 2 cut(s) 2417, 2705
AccI GTMKAC 1 cut(s) 235
AciI CCGC 6 cut(s) 1011, 1420, 1472, 1839, 1893, 2343
AclWI GGATC 5 cut(s) 158, 285, 298, 577, 2686
AcoI YGGCCR 2 cut(s) 382, 2262
AcsI RAATTY 6 cut(s) 52, 510, 952, 1342, 1415, 2448
AcuI CTGAAG 2 cut(s) 1851, 2931
AcyI GRCGYC 1 cut(s) 222
AfaI GTAC 2 cut(s) 1830, 2177
AflII CTTAAG 1 cut(s) 325
AflIII ACRYGT 4 cut(s) 1576, 2229, 2590, 2799
AhlI ACTAGT 3 cut(s) 1904, 2636, 2878
AjuI GAANNNNNNNTTGG 2 cut(s) 1769, 1801
Alw21I GWGCWC 1 cut(s) 2947
Alw26I GTCTC 8 cut(s) 94, 110, 482, 1042, 1493, 1993, 2031, 2519
AlwI GGATC 5 cut(s) 158, 285, 298, 577, 2686
AlwNI CAGNNNCTG 2 cut(s) 1592, 1874
Ama87I CYCGRG 1 cut(s) 341
AoxI GGCC 4 cut(s) 382, 870, 2262, 2358
ApeKI GCWGC 3 cut(s) 1270, 2693, 3038
ApoI RAATTY 6 cut(s) 52, 510, 952, 1342, 1415, 2448
ArsI GACNNNNNNTTYG 2 cut(s) 1016, 1048
AseI ATTAAT 1 cut(s) 686
Asp700I GAANNNNTTC 1 cut(s) 198
AspA2I CCTAGG 1 cut(s) 1408
AspLEI GCGC 1 cut(s) 3066
AspS9I GGNCC 3 cut(s) 870, 1682, 2359
AsuC2I CCSGG 2 cut(s) 173, 1993
AsuHPI GGTGA 4 cut(s) 217, 265, 1034, 2588
AsuNHI GCTAGC 2 cut(s) 136, 2810
AvaI CYCGRG 1 cut(s) 341
AvaII GGWCC 1 cut(s) 1682
AvrII CCTAGG 1 cut(s) 1408
BamHI GGATCC 1 cut(s) 290
BanI GGYRCC 3 cut(s) 434, 946, 2894
BanII GRGCYC 2 cut(s) 275, 1956
BarI GAAGNNNNNNTAC 2 cut(s) 715, 747
BauI CACGAG 1 cut(s) 614
BbsI GAAGAC 2 cut(s) 791, 1901
Bbv12I GWGCWC 1 cut(s) 2947
BbvI GCAGC 3 cut(s) 1282, 2680, 3025
BccI CCATC 8 cut(s) 102, 811, 881, 1013, 1336, 2120, 2419, 2567
BceAI ACGGC 3 cut(s) 235, 369, 1099
BciVI GTATCC 1 cut(s) 2734
BclI TGATCA 2 cut(s) 1047, 2794
BcnI CCSGG 2 cut(s) 173, 1993
BcoDI GTCTC 8 cut(s) 94, 110, 482, 1042, 1493, 1993, 2031, 2519
BcuI ACTAGT 3 cut(s) 1904, 2636, 2878
BfmI CTRYAG 2 cut(s) 229, 2743
BfrI CTTAAG 1 cut(s) 325
BfuAI ACCTGC 3 cut(s) 236, 391, 1218
BfuI GTATCC 1 cut(s) 2734
BisI GCNGC 4 cut(s) 1271, 2344, 2694, 3039
BlnI CCTAGG 1 cut(s) 1408
BlsI GCNGC 4 cut(s) 1272, 2345, 2695, 3040
Bme1390I CCNGG 2 cut(s) 173, 1993
Bme18I GGWCC 1 cut(s) 1682
BmeT110I CYCGRG 1 cut(s) 341
BmgT120I GGNCC 3 cut(s) 870, 1682, 2359
BmrFI CCNGG 2 cut(s) 173, 1993
BmrI ACTGGG 2 cut(s) 876, 1614
BmsI GCATC 8 cut(s) 418, 663, 1188, 1260, 1404, 2255, 2416, 3025
BmtI GCTAGC 2 cut(s) 140, 2814
BmuI ACTGGG 2 cut(s) 876, 1614
BoxI GACNNNNGTC 1 cut(s) 1868
BpiI GAAGAC 2 cut(s) 791, 1901
BplI GAGNNNNNCTC 4 cut(s) 257, 289, 1938, 1970
BpmI CTGGAG 3 cut(s) 284, 1124, 2445
BpuEI CTTGAG 4 cut(s) 832, 1048, 1793, 2534
BpuMI CCSGG 2 cut(s) 173, 1993
BsaAI YACGTR 1 cut(s) 1577
BsaHI GRCGYC 1 cut(s) 222
BsaI GGTCTC 1 cut(s) 1493
BsaJI CCNNGG 4 cut(s) 891, 1081, 1408, 1627
BsaXI ACNNNNNCTCC 1 cut(s) 30
Bse3DI GCAATG 5 cut(s) 131, 823, 1433, 2353, 2475
BseDI CCNNGG 4 cut(s) 891, 1081, 1408, 1627
BseGI GGATG 9 cut(s) 94, 654, 726, 873, 1179, 1251, 1395, 2407, 2578
BseMI GCAATG 5 cut(s) 131, 823, 1433, 2353, 2475
BseMII CTCAG 3 cut(s) 1053, 2128, 2637
BseRI GAGGAG 2 cut(s) 363, 2102
BseXI GCAGC 3 cut(s) 1282, 2680, 3025
BseYI CCCAGC 1 cut(s) 268
BsgI GTGCAG 1 cut(s) 2679
Bsh1285I CGRYCG 1 cut(s) 2535
BshFI GGCC 4 cut(s) 384, 872, 2264, 2360
BshNI GGYRCC 3 cut(s) 434, 946, 2894
BsiEI CGRYCG 1 cut(s) 2535
BsiHKAI GWGCWC 1 cut(s) 2947
BsiHKCI CYCGRG 1 cut(s) 341
BsiSI CCGG 2 cut(s) 172, 1992
BslFI GGGAC 2 cut(s) 1695, 2022
BsmAI GTCTC 8 cut(s) 94, 110, 482, 1042, 1493, 1993, 2031, 2519
BsmBI CGTCTC 1 cut(s) 110
BsmFI GGGAC 2 cut(s) 1695, 2022
BsmI GAATGC 3 cut(s) 1323, 1858, 2754
BsnI GGCC 4 cut(s) 384, 872, 2264, 2360
Bso31I GGTCTC 1 cut(s) 1493
BsoBI CYCGRG 1 cut(s) 341
Bsp1286I GDGCHC 3 cut(s) 275, 1956, 2947
Bsp1407I TGTACA 1 cut(s) 2175
BspACI CCGC 6 cut(s) 1011, 1420, 1472, 1839, 1893, 2343
BspANI GGCC 4 cut(s) 384, 872, 2264, 2360
BspCNI CTCAG 3 cut(s) 1052, 2127, 2636
BspMAI CTGCAG 1 cut(s) 233
BspMI ACCTGC 3 cut(s) 236, 391, 1218
BspOI GCTAGC 2 cut(s) 140, 2814
BspPI GGATC 5 cut(s) 158, 285, 298, 577, 2686
BspT107I GGYRCC 3 cut(s) 434, 946, 2894
BspTI CTTAAG 1 cut(s) 325
BspTNI GGTCTC 1 cut(s) 1493
BsrDI GCAATG 5 cut(s) 131, 823, 1433, 2353, 2475
BsrGI TGTACA 1 cut(s) 2175
BssECI CCNNGG 4 cut(s) 891, 1081, 1408, 1627
BssNI GRCGYC 1 cut(s) 222
BssSI CACGAG 1 cut(s) 614
BssT1I CCWWGG 2 cut(s) 891, 1408
Bst2BI CACGAG 1 cut(s) 614
Bst4CI ACNGT 1 cut(s) 1588
Bst6I CTCTTC 3 cut(s) 366, 2391, 2952
BstACI GRCGYC 1 cut(s) 222
BstAFI CTTAAG 1 cut(s) 325
BstAPI GCANNNNNTGC 2 cut(s) 397, 406
BstAUI TGTACA 1 cut(s) 2175
BstBAI YACGTR 1 cut(s) 1577
BstC8I GCNNGC 3 cut(s) 129, 138, 2812
BstDEI CTNAG 9 cut(s) 317, 485, 643, 974, 1039, 1645, 2114, 2250, 2623
BstDSI CCRYGG 1 cut(s) 1081
BstEII GGTNACC 1 cut(s) 2576
BstF5I GGATG 9 cut(s) 94, 654, 726, 873, 1179, 1251, 1395, 2407, 2578
BstHHI GCGC 1 cut(s) 3066
BstMAI GTCTC 8 cut(s) 94, 110, 482, 1042, 1493, 1993, 2031, 2519
BstMCI CGRYCG 1 cut(s) 2535
BstMWI GCNNNNNNNGC 8 cut(s) 133, 137, 146, 228, 397, 406, 1279, 1880
BstNSI RCATGY 5 cut(s) 2233, 2325, 2594, 2803, 2997
BstPAI GACNNNNGTC 1 cut(s) 1868
BstPI GGTNACC 1 cut(s) 2576
BstSCI CCNGG 2 cut(s) 171, 1991
BstSFI CTRYAG 2 cut(s) 229, 2743
BstV1I GCAGC 3 cut(s) 1282, 2680, 3025
BstV2I GAAGAC 2 cut(s) 791, 1901
BstX2I RGATCY 2 cut(s) 290, 582
BstXI CCANNNNNNTGG 4 cut(s) 1148, 1172, 1484, 1535
BstYI RGATCY 2 cut(s) 290, 582
BsuI GTATCC 1 cut(s) 2734
BsuRI GGCC 4 cut(s) 384, 872, 2264, 2360
BtgI CCRYGG 1 cut(s) 1081
BtgZI GCGATG 1 cut(s) 227
BtsCI GGATG 9 cut(s) 94, 654, 726, 873, 1179, 1251, 1395, 2407, 2578
BtsIMutI CAGTG 4 cut(s) 1148, 1533, 2790, 3037
BveI ACCTGC 3 cut(s) 236, 391, 1218
Cac8I GCNNGC 3 cut(s) 129, 138, 2812
CaiI CAGNNNCTG 2 cut(s) 1592, 1874
CfoI GCGC 1 cut(s) 3066
Cfr13I GGNCC 3 cut(s) 870, 1682, 2359
CseI GACGC 1 cut(s) 211
Csp6I GTAC 2 cut(s) 1829, 2176
CspCI CAANNNNNGTGG 2 cut(s) 1246, 1281
CviQI GTAC 2 cut(s) 1829, 2176
DdeI CTNAG 9 cut(s) 317, 485, 643, 974, 1039, 1645, 2114, 2250, 2623
DraI TTTAAA 2 cut(s) 51, 1065
EaeI YGGCCR 2 cut(s) 382, 2262
Eam1104I CTCTTC 3 cut(s) 366, 2391, 2952
EarI CTCTTC 3 cut(s) 366, 2391, 2952
Eco130I CCWWGG 2 cut(s) 891, 1408
Eco24I GRGCYC 2 cut(s) 275, 1956
Eco31I GGTCTC 1 cut(s) 1493
Eco32I GATATC 2 cut(s) 2740, 3028
Eco47I GGWCC 1 cut(s) 1682
Eco57I CTGAAG 2 cut(s) 1851, 2931
Eco88I CYCGRG 1 cut(s) 341
Eco91I GGTNACC 1 cut(s) 2576
EcoO109I RGGNCCY 2 cut(s) 1682, 2359
EcoO65I GGTNACC 1 cut(s) 2576
EcoRV GATATC 2 cut(s) 2740, 3028
EcoT14I CCWWGG 2 cut(s) 891, 1408
EcoT38I GRGCYC 2 cut(s) 275, 1956
ErhI CCWWGG 2 cut(s) 891, 1408
Esp3I CGTCTC 1 cut(s) 110
FalI AAGNNNNNCTT 6 cut(s) 783, 815, 1849, 1881, 2172, 2204
FaqI GGGAC 2 cut(s) 1695, 2022
FauNDI CATATG 1 cut(s) 2101
FbaI TGATCA 2 cut(s) 1047, 2794
FblI GTMKAC 1 cut(s) 235
Fnu4HI GCNGC 4 cut(s) 1271, 2344, 2694, 3039
FokI GGATG 9 cut(s) 81, 641, 713, 860, 1166, 1238, 1382, 2394, 2585
FriOI GRGCYC 2 cut(s) 275, 1956
Fsp4HI GCNGC 4 cut(s) 1271, 2344, 2694, 3039
GlaI GCGC 1 cut(s) 3065
GluI GCNGC 4 cut(s) 1271, 2344, 2694, 3039
GsaI CCCAGC 1 cut(s) 272
GsuI CTGGAG 3 cut(s) 284, 1124, 2445
HaeIII GGCC 4 cut(s) 384, 872, 2264, 2360
HapII CCGG 2 cut(s) 172, 1992
HgaI GACGC 1 cut(s) 211
HhaI GCGC 1 cut(s) 3066
Hin1I GRCGYC 1 cut(s) 222
Hin6I GCGC 1 cut(s) 3064
HinP1I GCGC 1 cut(s) 3064
HincII GTYRAC 2 cut(s) 236, 1503
HindII GTYRAC 2 cut(s) 236, 1503
HindIII AAGCTT 4 cut(s) 319, 539, 546, 1928
HpaII CCGG 2 cut(s) 172, 1992
HphI GGTGA 4 cut(s) 217, 265, 1034, 2588
Hpy166II GTNNAC 7 cut(s) 236, 1207, 1503, 1998, 2176, 2368, 2775
Hpy8I GTNNAC 7 cut(s) 236, 1207, 1503, 1998, 2176, 2368, 2775
Hpy99I CGWCG 1 cut(s) 240
HpyCH4III ACNGT 1 cut(s) 1588
HpyCH4IV ACGT 2 cut(s) 1103, 1576
HpyF10VI GCNNNNNNNGC 8 cut(s) 133, 137, 146, 228, 397, 406, 1279, 1880
HpyF3I CTNAG 9 cut(s) 317, 485, 643, 974, 1039, 1645, 2114, 2250, 2623
HpySE526I ACGT 2 cut(s) 1103, 1576
Hsp92I GRCGYC 1 cut(s) 222
HspAI GCGC 1 cut(s) 3064
KflI GGGWCCC 1 cut(s) 1682
Ksp22I TGATCA 2 cut(s) 1047, 2794
LmnI GCTCC 7 cut(s) 83, 265, 560, 1823, 2243, 2388, 2666
Lsp1109I GCAGC 3 cut(s) 1282, 2680, 3025
LweI GCATC 8 cut(s) 418, 663, 1188, 1260, 1404, 2255, 2416, 3025
MaeII ACGT 2 cut(s) 1103, 1576
MfeI CAATTG 4 cut(s) 86, 457, 1289, 1367
MflI RGATCY 2 cut(s) 290, 582
MhlI GDGCHC 3 cut(s) 275, 1956, 2947
MlyI GAGTC 4 cut(s) 96, 1881, 1946, 2962
MmeI TCCRAC 1 cut(s) 2622
MroXI GAANNNNTTC 1 cut(s) 198
MslI CAYNNNNRTG 2 cut(s) 1170, 2829
MspA1I CMGCKG 2 cut(s) 1422, 2343
MspCI CTTAAG 1 cut(s) 325
MspI CCGG 2 cut(s) 172, 1992
MspR9I CCNGG 2 cut(s) 173, 1993
MunI CAATTG 4 cut(s) 86, 457, 1289, 1367
Mva1269I GAATGC 3 cut(s) 1323, 1858, 2754
MwoI GCNNNNNNNGC 8 cut(s) 133, 137, 146, 228, 397, 406, 1279, 1880
NciI CCSGG 2 cut(s) 173, 1993
NdeI CATATG 1 cut(s) 2101
NheI GCTAGC 2 cut(s) 136, 2810
NmeAIII GCCGAG 1 cut(s) 1608
NmuCI GTSAC 6 cut(s) 175, 223, 253, 1022, 1861, 2576
NspI RCATGY 5 cut(s) 2233, 2325, 2594, 2803, 2997
PaeR7I CTCGAG 1 cut(s) 341
PaqCI CACCTGC 1 cut(s) 236
PciI ACATGT 3 cut(s) 2229, 2590, 2799
PcsI WCGNNNNNNNCGW 1 cut(s) 1635
PctI GAATGC 3 cut(s) 1323, 1858, 2754
PdmI GAANNNNTTC 1 cut(s) 198
PflMI CCANNNNNTGG 2 cut(s) 2417, 2705
PkrI GCNGC 4 cut(s) 1272, 2345, 2695, 3040
Ple19I CGATCG 1 cut(s) 2535
PleI GAGTC 4 cut(s) 96, 1881, 1945, 2962
PpsI GAGTC 4 cut(s) 96, 1881, 1945, 2962
Ppu21I YACGTR 1 cut(s) 1577
PpuMI RGGWCCY 1 cut(s) 1682
PscI ACATGT 3 cut(s) 2229, 2590, 2799
PshAI GACNNNNGTC 1 cut(s) 1868
PshBI ATTAAT 1 cut(s) 686
Psp5II RGGWCCY 1 cut(s) 1682
PspEI GGTNACC 1 cut(s) 2576
PspFI CCCAGC 1 cut(s) 268
PspPI GGNCC 3 cut(s) 870, 1682, 2359
PspPPI RGGWCCY 1 cut(s) 1682
PsrI GAACNNNNNNTAC 2 cut(s) 1775, 1807
PstI CTGCAG 1 cut(s) 233
PstNI CAGNNNCTG 2 cut(s) 1592, 1874
PsuI RGATCY 2 cut(s) 290, 582
PvuI CGATCG 1 cut(s) 2535
RsaI GTAC 2 cut(s) 1830, 2177
RsaNI GTAC 2 cut(s) 1829, 2176
RseI CAYNNNNRTG 2 cut(s) 1170, 2829
SalI GTCGAC 1 cut(s) 234
SatI GCNGC 4 cut(s) 1271, 2344, 2694, 3039
Sau96I GGNCC 3 cut(s) 870, 1682, 2359
SchI GAGTC 4 cut(s) 96, 1881, 1946, 2962
ScrFI CCNGG 2 cut(s) 173, 1993
SduI GDGCHC 3 cut(s) 275, 1956, 2947
SfaNI GCATC 8 cut(s) 418, 663, 1188, 1260, 1404, 2255, 2416, 3025
SfcI CTRYAG 2 cut(s) 229, 2743
Sfr274I CTCGAG 1 cut(s) 341
SinI GGWCC 1 cut(s) 1682
SlaI CTCGAG 1 cut(s) 341
SmiI ATTTAAAT 1 cut(s) 1065
SmiMI CAYNNNNRTG 2 cut(s) 1170, 2829
SmlI CTYRAG 6 cut(s) 325, 341, 811, 1027, 1772, 2549
SmoI CTYRAG 6 cut(s) 325, 341, 811, 1027, 1772, 2549
SpeI ACTAGT 3 cut(s) 1904, 2636, 2878
SsiI CCGC 6 cut(s) 1011, 1420, 1472, 1839, 1893, 2343
StyD4I CCNGG 2 cut(s) 171, 1991
StyI CCWWGG 2 cut(s) 891, 1408
SwaI ATTTAAAT 1 cut(s) 1065
TaaI ACNGT 1 cut(s) 1588
TaiI ACGT 2 cut(s) 1106, 1579
TaqI TCGA 7 cut(s) 105, 235, 342, 635, 990, 1720, 2296
TatI WGTACW 1 cut(s) 2175
TauI GCSGC 1 cut(s) 2346
TscAI CASTG 4 cut(s) 1148, 1540, 2797, 3037
TseFI GTSAC 6 cut(s) 175, 223, 253, 1022, 1861, 2576
TseI GCWGC 3 cut(s) 1270, 2693, 3038
Tsp45I GTSAC 6 cut(s) 175, 223, 253, 1022, 1861, 2576
TspGWI ACGGA 3 cut(s) 134, 835, 1565
TspRI CASTG 4 cut(s) 1148, 1540, 2797, 3037
Van91I CCANNNNNTGG 2 cut(s) 2417, 2705
Vha464I CTTAAG 1 cut(s) 325
VpaK11BI GGWCC 1 cut(s) 1682
VspI ATTAAT 1 cut(s) 686
XapI RAATTY 6 cut(s) 52, 510, 952, 1342, 1415, 2448
XbaI TCTAGA 1 cut(s) 1384
XceI RCATGY 5 cut(s) 2233, 2325, 2594, 2803, 2997
XhoI CTCGAG 1 cut(s) 341
XmaJI CCTAGG 1 cut(s) 1408
XmiI GTMKAC 1 cut(s) 235
XmnI GAANNNNTTC 1 cut(s) 198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.