RchiOBHm_Chr1g0331671
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
21522340 .. 21525520
3181 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56068

Sequence Viewer

Length: 3051 bp
ATGCAATGTTCATTTTTTGTTGTATCTCCTCCATGCATGCAACTGAACCATCCCTTAGCCATGAGACTCGAAGGGAGTGAGAGGGATAGGCTGGCACTACTAGCGATCAAAGCTCAAATACAACACGATCCCAACCAGGTCACAAGCTCATGGAATGAAACCCTTCACTTTTGCCTGTGGCACGGTGTCACCTGCAGTCGACGACATCGCCAAAGGGTGACAAAGCTTCAGCTGGGCTCTCTAGCGTTGGTGGGATCCATATCTCAGCACATAGGAAACCTAAGCTTCTTAAGAGTGCTAAATCTGGAGAACAATAGCTTCAATCATCAAATCCCTCCTCAAATTGGGCATTTGCACAGATTGAAGGTACTGTATCTAAAAAATAACTCACTTAATGGTACTATTCCTCCCAACATATCCAATTGCTTCCAACTCATCTCTCTTGATCTTGCTGGAAACCTTCTGGTGGGTAAAATTCCTCCCCAACTTAGTTCCTTGTCAAAGCTTGGATTTTTTAATTTGCAAGTTAACAATTTATCAGGAGAGATCCCTCCTTCTTTGGGGAACCTTTCGTCTCTCGAGATATTTGGTTCAACTTTTAATTCCTTAGAAGGAAGCATCCCTAATTCTCTATGCCAGTTGAAAAAATTAACAATTCTCTATTTAGGTGAAAATAGTTTGTCTGGTATCATCCCTTCCTGCATTTATAATCTCTCTAGTATAGTTGAATTCGAGGTATCAGGAAACCAAATTGAAGGAAGTCTTCCCTCAAACTTGGGCAATGCTTTTCCCAACCTTCAAATCTTTTCCATTTACCAGAATCAATTTACTGGGGCCATCCCTTTGTCAATATCCAATGCAACAAATCTTGTGTGGTTTCAAGGTTCTTCAAACAAACTTACTGGAAAGGTGCCAAATTTACGAAATCTTCATAACCTAAGGCGATTTGGTGTCAGTGACAATAATCTTGGAAGCAGTAAACATGGTGACTTGAGTTTTGTCTCAGAATTGATCAACGCCACACGGCTAACTGGGTTGAGCTTGGGCTACAATAATTTTGGAGGGATGTTGCCCACATCAATATCCAATCTCTCAACCAATCTCCGAATCCTAGGAATTGGAGAAAACAAACTGCATGGAAGCATCCCAAGTGGATTAGTGAATCTTATCAACTTGGAAGTGCTCTCTCTGGAGGAAAACTTCTTCACAGATAGCATCCCCAATGACATTGGGAAGGTTTCAGGGCTTGAGAAATTGTATCTTAACAACAACCAATTATCAGGGAGAATTCCATCCTCTCTAGGAAACTTGACATTGTTAGCAATGCTCCAATTGCAAGAAAATAATCTAGAGGGTAGCATCCCTTCCAGCCTAGGGAAATACCAGTGGTTACTAGAATTGGGCCTTTCTGGAAACAAACTGAATGGCACGATACCTCCTCAGGTTATTGGCCTCTCATCTTTATCAACAATTTTGGCATTGCATAGAAACCAATTCACTGGTTCCCTTCCGATGGAGATTGGCAAATTGAAGAATTTAGGTGGACTAGACGTTTCTGACAACTTGTTATCAGGAGAACTTCCCAGTAGCCTTGGCAGTTGCAAGAGTTTAGAAGCCTTATACTTGCAAGGCAACTTCTTCTTGGGACCCATTCCTTCATCTATGAAGGGCTTGAGAGGGATTCGATATTTAGACCTTTCTCGAAACAATTTGTCAGGAGATATTCCACAGTTCTTCGAACGCTTTGGAAACTTGGAGAATCTGAACCTATCCTTCAATCAATTTTGGGGAGCAGTACCAACTGAGGGTATTTTCAAGAATGCAAGTGCTATTTCAGTTGCTGGAAACACAAGACTTTGCGGCGGTATTCCTAATCTTCAACTTCCTGTGTGCGAGTCTAAAGAGTCTAAAGGAGAAGGATTGTCTCGTAGAATGAAACTAGTGATCTCTTTAGTTTCTGGGATCACTCTGTTGGGACTGGCTGTGGTGCTCACTCTTTTCGTTCTTCTTCGTAAGAAAAGGAAAGAAACTGAATTAAACACTTTTGGGAACTCTGTTTTGCAAGTTTCATATGCTACTCTTCTTAAAGCTACTGACGGGTTCTCTTCAGCTAATTTGATTGGTGTGGGTGCTTTTGGGTCTGTGTACAAAGGAATTCTTGGTGATGATAGAGTTGCTGTCGCTGTGAAGGTGCTTAACATGTTACACCAGGGAGCGTCTAAGAGTTTCATGGCTGAATGTGAGGCGTTGAGAAATATCAGGCATCGAAATCTGGTCAAGATCTTAACTGCATGTTCAAGTATTGATTTCAGCGGCAATGATTTCAAGGCCCTTGTTTACGAGTTCATGGACAATGGTAGCTTAGAGGAGTGGTTGCATCCATCTACTGGAACTGAAGAGGTAATAGAAGCACCCAAAAGTTTGAATCTTGTTCAAAGGGTCAACATCGCCATTGATGTTGCTAGTGCATTGGATTATCTTCACAACAATTGCGGAACACCGATCGTTCATTGTGATCTCAAGCCAAGTAATGTTCTTTTGGACAGTGACCTTACTGGACATGTTTCCGACTTTGGGCTGTCAAGGTTTCTCTTAAAACCAACCACGAGTGTTTCTGGAAATCAATCAAGCTCTATTGGAATTAGAGGATCGGTTGGTTATGCTGCGCCAGAGTATGGCATGGGAAGTGAAGTGTCAAAATATGGGGATGTCTATAGCTTTGGCATTCTCTTATTAGAAATGTTTACAGGGAAGAGACCCATGGATCACATGTTCAGTGACGGCTTGAATCTTCATAATTTTGTGAAGACATCTCTTTCTGAACGTGTTTCAGAGATTTTAGAATCACTAGTTCTCCAAGAAGACACCACCAATGTGGCTGAAGCTCACAGGCACAGCCAATTGAGTGTGAGAGCACAAAAAACTGAAGAGTTCTTGACTTCAATACTTGGTTTAGGTATTTCATGTTCTGTTGAATCCCCCACAAACAGAAAGGATATTAGTGATGTTGCTTCTGAATTGCATTCCATTAGGGGTAACCTTCTTGGCTAG

Protein Analysis

1016

Amino Acids

110.27

Weight (kDa)

7.1

Isoelectric Point (pI)

31.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 27 - 66 4.3e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 85 - 174 7.8e-08 Leucine-rich repeat region
LRR_14 PF23598 347 - 469 6.8e-07 Leucine-rich repeat region
LRR_14 PF23598 500 - 589 1.1e-06 Leucine-rich repeat region
LRR_8 PF13855 553 - 595 3.1e-06 Leucine rich repeat
Pkinase PF00069 703 - 939 1.1e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 705 - 924 6.4e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 708
AarI CACCTGC 1 cut(s) 200
Acc36I ACCTGC 1 cut(s) 200
AccB1I GGYRCC 1 cut(s) 910
AccB7I CCANNNNNTGG 2 cut(s) 2387, 2675
AccI GTMKAC 1 cut(s) 199
AciI CCGC 4 cut(s) 1860, 1863, 2313, 2493
AclWI GGATC 7 cut(s) 122, 249, 262, 541, 1970, 2656, 2772
AcsI RAATTY 6 cut(s) 474, 728, 916, 1287, 1534, 2154
AcuI CTGAAG 5 cut(s) 212, 2091, 2415, 2901, 2946
AfaI GTAC 4 cut(s) 369, 400, 1797, 2147
AfiI CCNNNNNNNGG 9 cut(s) 344, 466, 560, 1374, 1513, 1805, 2387, 2574, 2675
AflII CTTAAG 1 cut(s) 289
AflIII ACRYGT 4 cut(s) 2199, 2560, 2769, 2824
AhlI ACTAGT 2 cut(s) 1939, 2848
AjnI CCWGG 2 cut(s) 135, 2208
AleI CACNNNNGTG 1 cut(s) 2873
AloI GAACNNNNNNTCC 2 cut(s) 2756, 2788
Alw21I GWGCWC 3 cut(s) 1185, 1992, 2917
Alw26I GTCTC 5 cut(s) 58, 579, 1006, 1929, 2749
AlwI GGATC 7 cut(s) 122, 249, 262, 541, 1970, 2656, 2772
AlwNI CAGNNNCTG 1 cut(s) 1841
Ama87I CYCGRG 1 cut(s) 578
AoxI GGCC 4 cut(s) 834, 1402, 1450, 2328
ApeKI GCWGC 1 cut(s) 2663
ApoI RAATTY 6 cut(s) 474, 728, 916, 1287, 1534, 2154
ArsI GACNNNNNNTTYG 2 cut(s) 980, 1012
Asp700I GAANNNNTTC 1 cut(s) 162
AspA2I CCTAGG 2 cut(s) 1111, 1372
AspLEI GCGC 1 cut(s) 2668
AspS9I GGNCC 4 cut(s) 834, 1402, 1646, 2329
AsuHPI GGTGA 5 cut(s) 181, 229, 680, 998, 2174
AsuII TTCGAA 1 cut(s) 1737
AvaI CYCGRG 1 cut(s) 578
AvaII GGWCC 1 cut(s) 1646
AvrII CCTAGG 2 cut(s) 1111, 1372
AxyI CCTNAGG 2 cut(s) 938, 1440
BamHI GGATCC 1 cut(s) 254
BanI GGYRCC 1 cut(s) 910
BanII GRGCYC 1 cut(s) 239
BarI GAAGNNNNNNTAC 4 cut(s) 679, 711, 1348, 1380
BauI CACGAG 1 cut(s) 2605
BbsI GAAGAC 3 cut(s) 755, 2813, 2868
Bbv12I GWGCWC 3 cut(s) 1185, 1992, 2917
BbvI GCAGC 1 cut(s) 2650
BccI CCATC 5 cut(s) 57, 845, 1300, 1507, 2389
BceAI ACGGC 2 cut(s) 1040, 2797
BciT130I CCWGG 2 cut(s) 137, 2210
BclI TGATCA 1 cut(s) 1011
BcoDI GTCTC 5 cut(s) 58, 579, 1006, 1929, 2749
BcuI ACTAGT 2 cut(s) 1939, 2848
BfmI CTRYAG 2 cut(s) 193, 2713
BfrI CTTAAG 1 cut(s) 289
BfuAI ACCTGC 1 cut(s) 200
BglII AGATCT 1 cut(s) 2280
BisI GCNGC 3 cut(s) 1861, 2314, 2664
BlnI CCTAGG 2 cut(s) 1111, 1372
BlsI GCNGC 3 cut(s) 1862, 2315, 2665
Bme1390I CCNGG 2 cut(s) 137, 2210
Bme18I GGWCC 1 cut(s) 1646
BmeT110I CYCGRG 1 cut(s) 578
BmgT120I GGNCC 4 cut(s) 834, 1402, 1646, 2329
BmiI GGNNCC 7 cut(s) 256, 566, 835, 912, 1504, 1647, 1648
BmrFI CCNGG 2 cut(s) 137, 2210
BmrI ACTGGG 3 cut(s) 840, 1041, 1578
BmsI GCATC 6 cut(s) 627, 1152, 1224, 1368, 2272, 2386
BmuI ACTGGG 3 cut(s) 840, 1041, 1578
BpiI GAAGAC 3 cut(s) 755, 2813, 2868
BpmI CTGGAG 2 cut(s) 326, 1211
Bpu10I CCTNAGC 2 cut(s) 55, 281
Bpu14I TTCGAA 1 cut(s) 1737
BpuEI CTTGAG 4 cut(s) 1012, 1268, 1693, 2504
BsaBI GATNNNNATC 1 cut(s) 259
BsaI GGTCTC 1 cut(s) 2749
BsaJI CCNNGG 5 cut(s) 1111, 1372, 1591, 2209, 2760
BsaXI ACNNNNNCTCC 6 cut(s) 391, 421, 1420, 1450, 2838, 2868
Bsc4I CCNNNNNNNGG 9 cut(s) 344, 466, 560, 1374, 1513, 1805, 2387, 2574, 2675
Bse21I CCTNAGG 2 cut(s) 938, 1440
Bse3DI GCAATG 5 cut(s) 11, 787, 1329, 1478, 2323
Bse8I GATNNNNATC 1 cut(s) 259
BseBI CCWGG 2 cut(s) 137, 2210
BseDI CCNNGG 5 cut(s) 1111, 1372, 1591, 2209, 2760
BseJI GATNNNNATC 1 cut(s) 259
BseLI CCNNNNNNNGG 9 cut(s) 344, 466, 560, 1374, 1513, 1805, 2387, 2574, 2675
BseMI GCAATG 5 cut(s) 11, 787, 1329, 1478, 2323
BseMII CTCAG 4 cut(s) 278, 1017, 1454, 1794
BseRI GAGGAG 4 cut(s) 18, 327, 1428, 2381
BseXI GCAGC 1 cut(s) 2650
BseYI CCCAGC 1 cut(s) 232
Bsh1285I CGRYCG 1 cut(s) 2505
BshFI GGCC 4 cut(s) 836, 1404, 1452, 2330
BshNI GGYRCC 1 cut(s) 910
BsiEI CGRYCG 1 cut(s) 2505
BsiHKAI GWGCWC 3 cut(s) 1185, 1992, 2917
BsiHKCI CYCGRG 1 cut(s) 578
BslFI GGGAC 2 cut(s) 1659, 1989
BslI CCNNNNNNNGG 9 cut(s) 344, 466, 560, 1374, 1513, 1805, 2387, 2574, 2675
BsmAI GTCTC 5 cut(s) 58, 579, 1006, 1929, 2749
BsmBI CGTCTC 1 cut(s) 579
BsmFI GGGAC 2 cut(s) 1659, 1989
BsmI GAATGC 3 cut(s) 1825, 2724, 3022
BsnI GGCC 4 cut(s) 836, 1404, 1452, 2330
Bso31I GGTCTC 1 cut(s) 2749
BsoBI CYCGRG 1 cut(s) 578
Bsp119I TTCGAA 1 cut(s) 1737
Bsp1286I GDGCHC 4 cut(s) 239, 1185, 1992, 2917
Bsp1407I TGTACA 1 cut(s) 2145
Bsp19I CCATGG 1 cut(s) 2760
BspACI CCGC 4 cut(s) 1860, 1863, 2313, 2493
BspANI GGCC 4 cut(s) 836, 1404, 1452, 2330
BspCNI CTCAG 4 cut(s) 277, 1016, 1453, 1795
BspLI GGNNCC 7 cut(s) 256, 566, 835, 912, 1504, 1647, 1648
BspMAI CTGCAG 1 cut(s) 197
BspMI ACCTGC 1 cut(s) 200
BspPI GGATC 7 cut(s) 122, 249, 262, 541, 1970, 2656, 2772
BspT104I TTCGAA 1 cut(s) 1737
BspT107I GGYRCC 1 cut(s) 910
BspTI CTTAAG 1 cut(s) 289
BspTNI GGTCTC 1 cut(s) 2749
BsrDI GCAATG 5 cut(s) 11, 787, 1329, 1478, 2323
BsrGI TGTACA 1 cut(s) 2145
BssECI CCNNGG 5 cut(s) 1111, 1372, 1591, 2209, 2760
BssSI CACGAG 1 cut(s) 2605
BssT1I CCWWGG 4 cut(s) 1111, 1372, 1591, 2760
Bst2BI CACGAG 1 cut(s) 2605
Bst2UI CCWGG 2 cut(s) 137, 2210
Bst4CI ACNGT 4 cut(s) 185, 372, 1731, 2546
Bst6I CTCTTC 5 cut(s) 2085, 2110, 2391, 2747, 2922
BstAFI CTTAAG 1 cut(s) 289
BstAUI TGTACA 1 cut(s) 2145
BstBI TTCGAA 1 cut(s) 1737
BstC8I GCNNGC 2 cut(s) 38, 93
BstDSI CCRYGG 1 cut(s) 2760
BstEII GGTNACC 1 cut(s) 3035
BstHHI GCGC 1 cut(s) 2668
BstMAI GTCTC 5 cut(s) 58, 579, 1006, 1929, 2749
BstMCI CGRYCG 1 cut(s) 2505
BstMWI GCNNNNNNNGC 3 cut(s) 101, 110, 1333
BstNI CCWGG 2 cut(s) 137, 2210
BstNSI RCATGY 5 cut(s) 40, 2203, 2295, 2564, 2773
BstPI GGTNACC 1 cut(s) 3035
BstSCI CCNGG 2 cut(s) 135, 2208
BstSFI CTRYAG 2 cut(s) 193, 2713
BstV1I GCAGC 1 cut(s) 2650
BstV2I GAAGAC 3 cut(s) 755, 2813, 2868
BstX2I RGATCY 3 cut(s) 254, 546, 2280
BstXI CCANNNNNNTGG 2 cut(s) 1499, 2875
BstYI RGATCY 3 cut(s) 254, 546, 2280
Bsu36I CCTNAGG 2 cut(s) 938, 1440
BsuRI GGCC 4 cut(s) 836, 1404, 1452, 2330
BtgI CCRYGG 1 cut(s) 2760
BtgZI GCGATG 2 cut(s) 191, 2431
BtsIMutI CAGTG 5 cut(s) 961, 1391, 1497, 2551, 2782
BveI ACCTGC 1 cut(s) 200
Cac8I GCNNGC 2 cut(s) 38, 93
CaiI CAGNNNCTG 1 cut(s) 1841
CfoI GCGC 1 cut(s) 2668
Cfr13I GGNCC 4 cut(s) 834, 1402, 1646, 2329
CseI GACGC 1 cut(s) 2205
CsiI ACCWGGT 1 cut(s) 135
Csp6I GTAC 4 cut(s) 368, 399, 1796, 2146
CviQI GTAC 4 cut(s) 368, 399, 1796, 2146
Eam1104I CTCTTC 5 cut(s) 2085, 2110, 2391, 2747, 2922
EarI CTCTTC 5 cut(s) 2085, 2110, 2391, 2747, 2922
Eco130I CCWWGG 4 cut(s) 1111, 1372, 1591, 2760
Eco24I GRGCYC 1 cut(s) 239
Eco31I GGTCTC 1 cut(s) 2749
Eco47I GGWCC 1 cut(s) 1646
Eco57I CTGAAG 5 cut(s) 212, 2091, 2415, 2901, 2946
Eco81I CCTNAGG 2 cut(s) 938, 1440
Eco88I CYCGRG 1 cut(s) 578
Eco91I GGTNACC 1 cut(s) 3035
EcoO109I RGGNCCY 2 cut(s) 1646, 2329
EcoO65I GGTNACC 1 cut(s) 3035
EcoRI GAATTC 3 cut(s) 728, 1287, 2154
EcoRII CCWGG 2 cut(s) 135, 2208
EcoT14I CCWWGG 4 cut(s) 1111, 1372, 1591, 2760
EcoT22I ATGCAT 1 cut(s) 38
EcoT38I GRGCYC 1 cut(s) 239
ErhI CCWWGG 4 cut(s) 1111, 1372, 1591, 2760
Esp3I CGTCTC 1 cut(s) 579
FalI AAGNNNNNCTT 4 cut(s) 747, 779, 2142, 2174
FaqI GGGAC 2 cut(s) 1659, 1989
FauNDI CATATG 1 cut(s) 2071
FbaI TGATCA 1 cut(s) 1011
FblI GTMKAC 1 cut(s) 199
Fnu4HI GCNGC 3 cut(s) 1861, 2314, 2664
FriOI GRGCYC 1 cut(s) 239
Fsp4HI GCNGC 3 cut(s) 1861, 2314, 2664
GlaI GCGC 1 cut(s) 2667
GluI GCNGC 3 cut(s) 1861, 2314, 2664
GsaI CCCAGC 1 cut(s) 236
GsuI CTGGAG 2 cut(s) 326, 1211
HaeIII GGCC 4 cut(s) 836, 1404, 1452, 2330
HgaI GACGC 1 cut(s) 2205
HhaI GCGC 1 cut(s) 2668
Hin6I GCGC 1 cut(s) 2666
HinP1I GCGC 1 cut(s) 2666
HincII GTYRAC 3 cut(s) 200, 529, 2443
HindII GTYRAC 3 cut(s) 200, 529, 2443
HindIII AAGCTT 3 cut(s) 224, 283, 503
HpaI GTTAAC 1 cut(s) 529
HphI GGTGA 5 cut(s) 181, 229, 680, 998, 2174
Hpy166II GTNNAC 8 cut(s) 200, 529, 980, 1544, 2146, 2338, 2443, 2745
Hpy188I TCNGA 9 cut(s) 1006, 1106, 1512, 1558, 1764, 2569, 2821, 2833, 3016
Hpy8I GTNNAC 8 cut(s) 200, 529, 980, 1544, 2146, 2338, 2443, 2745
Hpy99I CGWCG 1 cut(s) 204
HpyCH4III ACNGT 4 cut(s) 185, 372, 1731, 2546
HpyCH4IV ACGT 2 cut(s) 1551, 2824
HpyF10VI GCNNNNNNNGC 3 cut(s) 101, 110, 1333
HpySE526I ACGT 2 cut(s) 1551, 2824
HspAI GCGC 1 cut(s) 2666
KflI GGGWCCC 1 cut(s) 1646
Ksp22I TGATCA 1 cut(s) 1011
KspAI GTTAAC 1 cut(s) 529
LmnI GCTCC 3 cut(s) 1332, 1790, 2213
Lsp1109I GCAGC 1 cut(s) 2650
LweI GCATC 6 cut(s) 627, 1152, 1224, 1368, 2272, 2386
MabI ACCWGGT 1 cut(s) 135
MaeII ACGT 2 cut(s) 1551, 2824
MfeI CAATTG 4 cut(s) 421, 1331, 2488, 2900
MflI RGATCY 3 cut(s) 254, 546, 2280
MhlI GDGCHC 4 cut(s) 239, 1185, 1992, 2917
MlyI GAGTC 3 cut(s) 60, 1904, 1913
MmeI TCCRAC 2 cut(s) 454, 2592
Mph1103I ATGCAT 1 cut(s) 38
MroXI GAANNNNTTC 1 cut(s) 162
MslI CAYNNNNRTG 1 cut(s) 2873
MspA1I CMGCKG 2 cut(s) 232, 2313
MspCI CTTAAG 1 cut(s) 289
MspR9I CCNGG 2 cut(s) 137, 2210
MunI CAATTG 4 cut(s) 421, 1331, 2488, 2900
Mva1269I GAATGC 3 cut(s) 1825, 2724, 3022
MvaI CCWGG 2 cut(s) 137, 2210
MwoI GCNNNNNNNGC 3 cut(s) 101, 110, 1333
NcoI CCATGG 1 cut(s) 2760
NdeI CATATG 1 cut(s) 2071
NlaIV GGNNCC 7 cut(s) 256, 566, 835, 912, 1504, 1647, 1648
NmuCI GTSAC 7 cut(s) 139, 187, 217, 956, 986, 2546, 2777
NsiI ATGCAT 1 cut(s) 38
NspI RCATGY 5 cut(s) 40, 2203, 2295, 2564, 2773
NspV TTCGAA 1 cut(s) 1737
OliI CACNNNNGTG 1 cut(s) 2873
PaeI GCATGC 1 cut(s) 40
PaeR7I CTCGAG 1 cut(s) 578
PaqCI CACCTGC 1 cut(s) 200
PciI ACATGT 3 cut(s) 2199, 2560, 2769
PctI GAATGC 3 cut(s) 1825, 2724, 3022
PdmI GAANNNNTTC 1 cut(s) 162
PfeI GAWTC 9 cut(s) 820, 1107, 1162, 1681, 1759, 2425, 2788, 2843, 2975
PflMI CCANNNNNTGG 2 cut(s) 2387, 2675
PkrI GCNGC 3 cut(s) 1862, 2315, 2665
Ple19I CGATCG 1 cut(s) 2505
PleI GAGTC 3 cut(s) 60, 1903, 1912
PpsI GAGTC 3 cut(s) 60, 1903, 1912
PpuMI RGGWCCY 1 cut(s) 1646
PscI ACATGT 3 cut(s) 2199, 2560, 2769
PsiI TTATAA 1 cut(s) 708
Psp5II RGGWCCY 1 cut(s) 1646
Psp6I CCWGG 2 cut(s) 135, 2208
PspEI GGTNACC 1 cut(s) 3035
PspFI CCCAGC 1 cut(s) 232
PspGI CCWGG 2 cut(s) 135, 2208
PspN4I GGNNCC 7 cut(s) 256, 566, 835, 912, 1504, 1647, 1648
PspPI GGNCC 4 cut(s) 834, 1402, 1646, 2329
PspPPI RGGWCCY 1 cut(s) 1646
PsrI GAACNNNNNNTAC 2 cut(s) 2950, 2982
PstI CTGCAG 1 cut(s) 197
PstNI CAGNNNCTG 1 cut(s) 1841
PsuI RGATCY 3 cut(s) 254, 546, 2280
PvuI CGATCG 1 cut(s) 2505
PvuII CAGCTG 1 cut(s) 232
RsaI GTAC 4 cut(s) 369, 400, 1797, 2147
RsaNI GTAC 4 cut(s) 368, 399, 1796, 2146
RseI CAYNNNNRTG 1 cut(s) 2873
SalI GTCGAC 1 cut(s) 198
SatI GCNGC 3 cut(s) 1861, 2314, 2664
Sau96I GGNCC 4 cut(s) 834, 1402, 1646, 2329
SchI GAGTC 3 cut(s) 60, 1904, 1913
ScrFI CCNGG 2 cut(s) 137, 2210
SduI GDGCHC 4 cut(s) 239, 1185, 1992, 2917
SexAI ACCWGGT 1 cut(s) 135
SfaNI GCATC 6 cut(s) 627, 1152, 1224, 1368, 2272, 2386
SfcI CTRYAG 2 cut(s) 193, 2713
Sfr274I CTCGAG 1 cut(s) 578
SfuI TTCGAA 1 cut(s) 1737
SinI GGWCC 1 cut(s) 1646
SlaI CTCGAG 1 cut(s) 578
SmiMI CAYNNNNRTG 1 cut(s) 2873
SmlI CTYRAG 6 cut(s) 289, 578, 991, 1247, 1672, 2519
SmoI CTYRAG 6 cut(s) 289, 578, 991, 1247, 1672, 2519
SpeI ACTAGT 2 cut(s) 1939, 2848
SphI GCATGC 1 cut(s) 40
SsiI CCGC 4 cut(s) 1860, 1863, 2313, 2493
StyD4I CCNGG 2 cut(s) 135, 2208
StyI CCWWGG 4 cut(s) 1111, 1372, 1591, 2760
TaaI ACNGT 4 cut(s) 185, 372, 1731, 2546
TaiI ACGT 2 cut(s) 1554, 2827
TaqI TCGA 8 cut(s) 69, 199, 579, 732, 1684, 1702, 1737, 2266
TatI WGTACW 1 cut(s) 2145
TauI GCSGC 2 cut(s) 1863, 2316
TfiI GAWTC 9 cut(s) 820, 1107, 1162, 1681, 1759, 2425, 2788, 2843, 2975
TscAI CASTG 5 cut(s) 961, 1391, 1504, 2551, 2782
TseFI GTSAC 7 cut(s) 139, 187, 217, 956, 986, 2546, 2777
TseI GCWGC 1 cut(s) 2663
Tsp45I GTSAC 7 cut(s) 139, 187, 217, 956, 986, 2546, 2777
TspRI CASTG 5 cut(s) 961, 1391, 1504, 2551, 2782
Van91I CCANNNNNTGG 2 cut(s) 2387, 2675
Vha464I CTTAAG 1 cut(s) 289
VpaK11BI GGWCC 1 cut(s) 1646
XapI RAATTY 6 cut(s) 474, 728, 916, 1287, 1534, 2154
XbaI TCTAGA 1 cut(s) 1348
XceI RCATGY 5 cut(s) 40, 2203, 2295, 2564, 2773
XhoI CTCGAG 1 cut(s) 578
XmaJI CCTAGG 2 cut(s) 1111, 1372
XmiI GTMKAC 1 cut(s) 199
XmnI GAANNNNTTC 1 cut(s) 162
Zsp2I ATGCAT 1 cut(s) 38
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.