Belongs to the protein kinase superfamily. Ser Thr protein kinase family
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2423 |
| AccB1I | GGYRCC | 2 cut(s) | 1103, 3011 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 398, 2822 |
| AccBSI | CCGCTC | 1 cut(s) | 1258 |
| AccI | GTMKAC | 5 cut(s) | 325, 484, 720, 2843, 2859 |
| AccII | CGCG | 1 cut(s) | 620 |
| AccIII | TCCGGA | 2 cut(s) | 956, 1694 |
| AciI | CCGC | 7 cut(s) | 321, 377, 1256, 1983, 1986, 2246, 2519 |
| AclWI | GGATC | 5 cut(s) | 375, 388, 667, 967, 1536 |
| AcoI | YGGCCR | 1 cut(s) | 305 |
| AcsI | RAATTY | 8 cut(s) | 456, 600, 876, 1001, 1042, 1432, 1845, 2560 |
| AcuI | CTGAAG | 4 cut(s) | 538, 1460, 2148, 2558 |
| AcvI | CACGTG | 1 cut(s) | 303 |
| AcyI | GRCGYC | 2 cut(s) | 1104, 2840 |
| AfaI | GTAC | 6 cut(s) | 137, 495, 814, 1920, 2267, 2483 |
| AfeI | AGCGCT | 1 cut(s) | 1803 |
| AflIII | ACRYGT | 4 cut(s) | 394, 1686, 2701, 2916 |
| AgeI | ACCGGT | 1 cut(s) | 1622 |
| AhlI | ACTAGT | 1 cut(s) | 989 |
| AjnI | CCWGG | 2 cut(s) | 588, 1973 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 993, 1025, 2737, 2769 |
| Alw21I | GWGCWC | 3 cut(s) | 179, 275, 2174 |
| Alw26I | GTCTC | 3 cut(s) | 60, 200, 2896 |
| AlwI | GGATC | 5 cut(s) | 375, 388, 667, 967, 1536 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1516 |
| Ama87I | CYCGRG | 2 cut(s) | 704, 1333 |
| Aor13HI | TCCGGA | 2 cut(s) | 956, 1694 |
| Aor51HI | AGCGCT | 1 cut(s) | 1803 |
| AoxI | GGCC | 8 cut(s) | 42, 191, 253, 305, 708, 1576, 1768, 2308 |
| ApaI | GGGCCC | 1 cut(s) | 1772 |
| ApeKI | GCWGC | 7 cut(s) | 32, 35, 1513, 1516, 2005, 2512, 3024 |
| ApoI | RAATTY | 8 cut(s) | 456, 600, 876, 1001, 1042, 1432, 1845, 2560 |
| AsiGI | ACCGGT | 1 cut(s) | 1622 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1363 |
| AspA2I | CCTAGG | 1 cut(s) | 1498 |
| AspLEI | GCGC | 4 cut(s) | 620, 1106, 1556, 1804 |
| AspS9I | GGNCC | 6 cut(s) | 254, 709, 1031, 1625, 1768, 1769 |
| AsuC2I | CCSGG | 4 cut(s) | 195, 309, 1274, 2080 |
| AsuHPI | GGTGA | 5 cut(s) | 1124, 1612, 1853, 2294, 3137 |
| AsuNHI | GCTAGC | 1 cut(s) | 226 |
| AvaI | CYCGRG | 2 cut(s) | 704, 1333 |
| AvaII | GGWCC | 2 cut(s) | 1031, 1625 |
| AvrII | CCTAGG | 1 cut(s) | 1498 |
| AxyI | CCTNAGG | 1 cut(s) | 416 |
| BaeGI | GKGCMC | 1 cut(s) | 1772 |
| BamHI | GGATCC | 1 cut(s) | 380 |
| BanI | GGYRCC | 2 cut(s) | 1103, 3011 |
| BanII | GRGCYC | 4 cut(s) | 179, 275, 1772, 2174 |
| BbrPI | CACGTG | 1 cut(s) | 303 |
| Bbv12I | GWGCWC | 3 cut(s) | 179, 275, 2174 |
| BbvI | GCAGC | 7 cut(s) | 19, 47, 1503, 1525, 1992, 2499, 3036 |
| BccI | CCATC | 7 cut(s) | 239, 836, 1103, 1426, 2789, 2950, 3158 |
| BceAI | ACGGC | 1 cut(s) | 268 |
| BciT130I | CCWGG | 2 cut(s) | 590, 1975 |
| BciVI | GTATCC | 1 cut(s) | 1748 |
| BclI | TGATCA | 1 cut(s) | 1293 |
| BcnI | CCSGG | 4 cut(s) | 195, 309, 1274, 2080 |
| BcoDI | GTCTC | 3 cut(s) | 60, 200, 2896 |
| BcuI | ACTAGT | 1 cut(s) | 989 |
| BfaI | CTAG | 8 cut(s) | 227, 374, 990, 1373, 1427, 1499, 1710, 2093 |
| BfmI | CTRYAG | 4 cut(s) | 33, 567, 721, 2860 |
| BfoI | RGCGCY | 2 cut(s) | 1107, 1805 |
| BfuI | GTATCC | 1 cut(s) | 1748 |
| BisI | GCNGC | 8 cut(s) | 33, 36, 1514, 1517, 1984, 2006, 2513, 3025 |
| BlnI | CCTAGG | 1 cut(s) | 1498 |
| BlpI | GCTNAGC | 1 cut(s) | 353 |
| BlsI | GCNGC | 8 cut(s) | 34, 37, 1515, 1518, 1985, 2007, 2514, 3026 |
| Bme1390I | CCNGG | 6 cut(s) | 195, 309, 590, 1274, 1975, 2080 |
| Bme18I | GGWCC | 2 cut(s) | 1031, 1625 |
| BmeT110I | CYCGRG | 2 cut(s) | 704, 1333 |
| BmgT120I | GGNCC | 6 cut(s) | 254, 709, 1031, 1625, 1768, 1769 |
| BmiI | GGNNCC | 7 cut(s) | 286, 382, 692, 1105, 1770, 1771, 3013 |
| BmrFI | CCNGG | 6 cut(s) | 195, 309, 590, 1274, 1975, 2080 |
| BmtI | GCTAGC | 1 cut(s) | 230 |
| BpmI | CTGGAG | 5 cut(s) | 509, 1947, 1985, 2799, 2903 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2967 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 353 |
| BpuEI | CTTGAG | 3 cut(s) | 1085, 2645, 3076 |
| BpuMI | CCSGG | 4 cut(s) | 195, 309, 1274, 2080 |
| BsaAI | YACGTR | 1 cut(s) | 303 |
| BsaBI | GATNNNNATC | 2 cut(s) | 385, 2960 |
| BsaHI | GRCGYC | 2 cut(s) | 1104, 2840 |
| BsaI | GGTCTC | 1 cut(s) | 2896 |
| BsaJI | CCNNGG | 5 cut(s) | 188, 1261, 1498, 1714, 2347 |
| BsaWI | WCCGGW | 4 cut(s) | 956, 1028, 1622, 1694 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 805, 835 |
| Bse118I | RCCGGY | 3 cut(s) | 941, 1198, 1622 |
| Bse1I | ACTGG | 5 cut(s) | 492, 526, 1930, 2530, 2701 |
| Bse21I | CCTNAGG | 1 cut(s) | 416 |
| Bse3DI | GCAATG | 6 cut(s) | 45, 547, 1193, 2616, 2629, 2677 |
| Bse8I | GATNNNNATC | 2 cut(s) | 385, 2960 |
| BseAI | TCCGGA | 2 cut(s) | 956, 1694 |
| BseBI | CCWGG | 2 cut(s) | 590, 1975 |
| BseDI | CCNNGG | 5 cut(s) | 188, 1261, 1498, 1714, 2347 |
| BseGI | GGATG | 7 cut(s) | 1269, 1341, 1418, 1485, 2515, 2552, 2995 |
| BseJI | GATNNNNATC | 2 cut(s) | 385, 2960 |
| BseMI | GCAATG | 6 cut(s) | 45, 547, 1193, 2616, 2629, 2677 |
| BseMII | CTCAG | 6 cut(s) | 344, 488, 909, 1561, 2958, 3036 |
| BseNI | ACTGG | 5 cut(s) | 492, 526, 1930, 2530, 2701 |
| BseSI | GKGCMC | 1 cut(s) | 1772 |
| BseXI | GCAGC | 7 cut(s) | 19, 47, 1503, 1525, 1992, 2499, 3036 |
| BsgI | GTGCAG | 3 cut(s) | 171, 283, 3043 |
| Bsh1236I | CGCG | 1 cut(s) | 620 |
| Bsh1285I | CGRYCG | 1 cut(s) | 325 |
| BshFI | GGCC | 8 cut(s) | 44, 193, 255, 307, 710, 1578, 1770, 2310 |
| BshNI | GGYRCC | 2 cut(s) | 1103, 3011 |
| BshTI | ACCGGT | 1 cut(s) | 1622 |
| BsiEI | CGRYCG | 1 cut(s) | 325 |
| BsiHKAI | GWGCWC | 3 cut(s) | 179, 275, 2174 |
| BsiHKCI | CYCGRG | 2 cut(s) | 704, 1333 |
| BsmAI | GTCTC | 3 cut(s) | 60, 200, 2896 |
| BsmBI | CGTCTC | 1 cut(s) | 200 |
| BsmI | GAATGC | 2 cut(s) | 1948, 2871 |
| BsnI | GGCC | 8 cut(s) | 44, 193, 255, 307, 710, 1578, 1770, 2310 |
| Bso31I | GGTCTC | 1 cut(s) | 2896 |
| BsoBI | CYCGRG | 2 cut(s) | 704, 1333 |
| Bsp120I | GGGCCC | 1 cut(s) | 1768 |
| Bsp1286I | GDGCHC | 4 cut(s) | 179, 275, 1772, 2174 |
| Bsp13I | TCCGGA | 2 cut(s) | 956, 1694 |
| Bsp1407I | TGTACA | 1 cut(s) | 2265 |
| Bsp143I | GATC | 9 cut(s) | 264, 380, 672, 959, 1293, 1528, 2545, 2656, 3016 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 353 |
| Bsp19I | CCATGG | 2 cut(s) | 1261, 2347 |
| BspACI | CCGC | 7 cut(s) | 321, 377, 1256, 1983, 1986, 2246, 2519 |
| BspANI | GGCC | 8 cut(s) | 44, 193, 255, 307, 710, 1578, 1770, 2310 |
| BspCNI | CTCAG | 6 cut(s) | 345, 489, 908, 1560, 2959, 3037 |
| BspEI | TCCGGA | 2 cut(s) | 956, 1694 |
| BspFNI | CGCG | 1 cut(s) | 620 |
| BspHI | TCATGA | 2 cut(s) | 267, 451 |
| BspLI | GGNNCC | 7 cut(s) | 286, 382, 692, 1105, 1770, 1771, 3013 |
| BspMAI | CTGCAG | 1 cut(s) | 37 |
| BspOI | GCTAGC | 1 cut(s) | 230 |
| BspPI | GGATC | 5 cut(s) | 375, 388, 667, 967, 1536 |
| BspQI | GCTCTTC | 1 cut(s) | 2094 |
| BspT107I | GGYRCC | 2 cut(s) | 1103, 3011 |
| BspTNI | GGTCTC | 1 cut(s) | 2896 |
| BsrBI | CCGCTC | 1 cut(s) | 1258 |
| BsrDI | GCAATG | 6 cut(s) | 45, 547, 1193, 2616, 2629, 2677 |
| BsrFI | RCCGGY | 3 cut(s) | 941, 1198, 1622 |
| BsrGI | TGTACA | 1 cut(s) | 2265 |
| BsrI | ACTGG | 5 cut(s) | 492, 526, 1930, 2530, 2701 |
| BssAI | RCCGGY | 3 cut(s) | 941, 1198, 1622 |
| BssECI | CCNNGG | 5 cut(s) | 188, 1261, 1498, 1714, 2347 |
| BssMI | GATC | 9 cut(s) | 264, 380, 672, 959, 1293, 1528, 2545, 2656, 3016 |
| BssNI | GRCGYC | 2 cut(s) | 1104, 2840 |
| BssT1I | CCWWGG | 5 cut(s) | 188, 1261, 1498, 1714, 2347 |
| Bst2UI | CCWGG | 2 cut(s) | 590, 1975 |
| Bst4CI | ACNGT | 5 cut(s) | 284, 853, 1524, 2727, 2800 |
| Bst6I | CTCTTC | 4 cut(s) | 2094, 2230, 2529, 2894 |
| BstACI | GRCGYC | 2 cut(s) | 1104, 2840 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 318 |
| BstAUI | TGTACA | 1 cut(s) | 2265 |
| BstBAI | YACGTR | 1 cut(s) | 303 |
| BstC8I | GCNNGC | 7 cut(s) | 219, 228, 943, 1279, 1511, 1966, 3052 |
| BstDSI | CCRYGG | 2 cut(s) | 1261, 2347 |
| BstF5I | GGATG | 7 cut(s) | 1269, 1341, 1418, 1485, 2515, 2552, 2995 |
| BstFNI | CGCG | 1 cut(s) | 620 |
| BstH2I | RGCGCY | 2 cut(s) | 1107, 1805 |
| BstHHI | GCGC | 4 cut(s) | 620, 1106, 1556, 1804 |
| BstKTI | GATC | 9 cut(s) | 267, 383, 675, 962, 1296, 1531, 2548, 2659, 3019 |
| BstMAI | GTCTC | 3 cut(s) | 60, 200, 2896 |
| BstMBI | GATC | 9 cut(s) | 264, 380, 672, 959, 1293, 1528, 2545, 2656, 3016 |
| BstMCI | CGRYCG | 1 cut(s) | 325 |
| BstNI | CCWGG | 2 cut(s) | 590, 1975 |
| BstNSI | RCATGY | 7 cut(s) | 321, 398, 1120, 1690, 2433, 2705, 2920 |
| BstSCI | CCNGG | 6 cut(s) | 193, 307, 588, 1272, 1973, 2078 |
| BstSFI | CTRYAG | 4 cut(s) | 33, 567, 721, 2860 |
| BstSLI | GKGCMC | 1 cut(s) | 1772 |
| BstUI | CGCG | 1 cut(s) | 620 |
| BstV1I | GCAGC | 7 cut(s) | 19, 47, 1503, 1525, 1992, 2499, 3036 |
| BstX2I | RGATCY | 3 cut(s) | 380, 672, 1528 |
| BstYI | RGATCY | 3 cut(s) | 380, 672, 1528 |
| Bsu36I | CCTNAGG | 1 cut(s) | 416 |
| BsuI | GTATCC | 1 cut(s) | 1748 |
| BsuRI | GGCC | 8 cut(s) | 44, 193, 255, 307, 710, 1578, 1770, 2310 |
| BtgI | CCRYGG | 2 cut(s) | 1261, 2347 |
| BtgZI | GCGATG | 1 cut(s) | 317 |
| BtsCI | GGATG | 7 cut(s) | 1269, 1341, 1418, 1485, 2515, 2552, 2995 |
| BtsI | GCAGTG | 4 cut(s) | 159, 1034, 1628, 2328 |
| BtsIMutI | CAGTG | 8 cut(s) | 154, 159, 1034, 1555, 1628, 2328, 2907, 3026 |
| Cac8I | GCNNGC | 7 cut(s) | 219, 228, 943, 1279, 1511, 1966, 3052 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1516 |
| CciI | TCATGA | 2 cut(s) | 267, 451 |
| CfoI | GCGC | 4 cut(s) | 620, 1106, 1556, 1804 |
| Cfr10I | RCCGGY | 3 cut(s) | 941, 1198, 1622 |
| Cfr13I | GGNCC | 6 cut(s) | 254, 709, 1031, 1625, 1768, 1769 |
| CseI | GACGC | 1 cut(s) | 2829 |
| CsiI | ACCWGGT | 1 cut(s) | 588 |
| Csp6I | GTAC | 6 cut(s) | 136, 494, 813, 1919, 2266, 2482 |
| CspAI | ACCGGT | 1 cut(s) | 1622 |
| CviQI | GTAC | 6 cut(s) | 136, 494, 813, 1919, 2266, 2482 |
| DinI | GGCGCC | 1 cut(s) | 1105 |
| DpnI | GATC | 9 cut(s) | 266, 382, 674, 961, 1295, 1530, 2547, 2658, 3018 |
| DpnII | GATC | 9 cut(s) | 264, 380, 672, 959, 1293, 1528, 2545, 2656, 3016 |
| DraI | TTTAAA | 2 cut(s) | 663, 2565 |
| EaeI | YGGCCR | 1 cut(s) | 305 |
| Eam1104I | CTCTTC | 4 cut(s) | 2094, 2230, 2529, 2894 |
| EarI | CTCTTC | 4 cut(s) | 2094, 2230, 2529, 2894 |
| EciI | GGCGGA | 1 cut(s) | 2508 |
| Ecl136II | GAGCTC | 3 cut(s) | 177, 273, 2172 |
| Eco130I | CCWWGG | 5 cut(s) | 188, 1261, 1498, 1714, 2347 |
| Eco24I | GRGCYC | 4 cut(s) | 179, 275, 1772, 2174 |
| Eco31I | GGTCTC | 1 cut(s) | 2896 |
| Eco32I | GATATC | 1 cut(s) | 745 |
| Eco47I | GGWCC | 2 cut(s) | 1031, 1625 |
| Eco47III | AGCGCT | 1 cut(s) | 1803 |
| Eco53kI | GAGCTC | 3 cut(s) | 177, 273, 2172 |
| Eco57I | CTGAAG | 4 cut(s) | 538, 1460, 2148, 2558 |
| Eco72I | CACGTG | 1 cut(s) | 303 |
| Eco81I | CCTNAGG | 1 cut(s) | 416 |
| Eco88I | CYCGRG | 2 cut(s) | 704, 1333 |
| EcoICRI | GAGCTC | 3 cut(s) | 177, 273, 2172 |
| EcoO109I | RGGNCCY | 3 cut(s) | 709, 1768, 1769 |
| EcoRII | CCWGG | 2 cut(s) | 588, 1973 |
| EcoRV | GATATC | 1 cut(s) | 745 |
| EcoT14I | CCWWGG | 5 cut(s) | 188, 1261, 1498, 1714, 2347 |
| EcoT22I | ATGCAT | 1 cut(s) | 2554 |
| EcoT38I | GRGCYC | 4 cut(s) | 179, 275, 1772, 2174 |
| EgeI | GGCGCC | 1 cut(s) | 1105 |
| EheI | GGCGCC | 1 cut(s) | 1105 |
| ErhI | CCWWGG | 5 cut(s) | 188, 1261, 1498, 1714, 2347 |
| Esp3I | CGTCTC | 1 cut(s) | 200 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2262, 2294, 2298, 2330 |
| FauI | CCCGC | 3 cut(s) | 370, 1263, 2239 |
| FauNDI | CATATG | 1 cut(s) | 2191 |
| FbaI | TGATCA | 1 cut(s) | 1293 |
| FblI | GTMKAC | 5 cut(s) | 325, 484, 720, 2843, 2859 |
| Fnu4HI | GCNGC | 8 cut(s) | 33, 36, 1514, 1517, 1984, 2006, 2513, 3025 |
| FokI | GGATG | 7 cut(s) | 1256, 1328, 1405, 1472, 2502, 2539, 3002 |
| FriOI | GRGCYC | 4 cut(s) | 179, 275, 1772, 2174 |
| Fsp4HI | GCNGC | 8 cut(s) | 33, 36, 1514, 1517, 1984, 2006, 2513, 3025 |
| FspBI | CTAG | 8 cut(s) | 227, 374, 990, 1373, 1427, 1499, 1710, 2093 |
| GlaI | GCGC | 4 cut(s) | 619, 1105, 1555, 1803 |
| GluI | GCNGC | 8 cut(s) | 33, 36, 1514, 1517, 1984, 2006, 2513, 3025 |
| GsuI | CTGGAG | 5 cut(s) | 509, 1947, 1985, 2799, 2903 |
| HaeII | RGCGCY | 2 cut(s) | 1107, 1805 |
| HaeIII | GGCC | 8 cut(s) | 44, 193, 255, 307, 710, 1578, 1770, 2310 |
| HgaI | GACGC | 1 cut(s) | 2829 |
| HhaI | GCGC | 4 cut(s) | 620, 1106, 1556, 1804 |
| Hin1I | GRCGYC | 2 cut(s) | 1104, 2840 |
| Hin6I | GCGC | 4 cut(s) | 618, 1104, 1554, 1802 |
| HinP1I | GCGC | 4 cut(s) | 618, 1104, 1554, 1802 |
| HincII | GTYRAC | 4 cut(s) | 326, 2157, 2694, 2844 |
| HindII | GTYRAC | 4 cut(s) | 326, 2157, 2694, 2844 |
| HindIII | AAGCTT | 6 cut(s) | 629, 1052, 1061, 1226, 1361, 2497 |
| HphI | GGTGA | 5 cut(s) | 1124, 1612, 1853, 2294, 3137 |
| Hpy99I | CGWCG | 3 cut(s) | 330, 866, 2845 |
| HpyAV | CCTTC | 6 cut(s) | 27, 1500, 1589, 1788, 2320, 2579 |
| HpyCH4III | ACNGT | 5 cut(s) | 284, 853, 1524, 2727, 2800 |
| HpyCH4IV | ACGT | 2 cut(s) | 302, 1674 |
| HpySE526I | ACGT | 2 cut(s) | 302, 1674 |
| Hsp92I | GRCGYC | 2 cut(s) | 1104, 2840 |
| HspAI | GCGC | 4 cut(s) | 618, 1104, 1554, 1802 |
| KasI | GGCGCC | 1 cut(s) | 1103 |
| Kpn2I | TCCGGA | 2 cut(s) | 956, 1694 |
| KroI | GCCGGC | 1 cut(s) | 941 |
| KroNI | GCCGGC | 1 cut(s) | 943 |
| Ksp22I | TGATCA | 1 cut(s) | 1293 |
| Kzo9I | GATC | 9 cut(s) | 264, 380, 672, 959, 1293, 1528, 2545, 2656, 3016 |
| LguI | GCTCTTC | 1 cut(s) | 2094 |
| LmnI | GCTCC | 6 cut(s) | 174, 182, 1263, 1913, 2351, 2818 |
| Lsp1109I | GCAGC | 7 cut(s) | 19, 47, 1503, 1525, 1992, 2499, 3036 |
| MabI | ACCWGGT | 1 cut(s) | 588 |
| MaeI | CTAG | 8 cut(s) | 227, 374, 990, 1373, 1427, 1499, 1710, 2093 |
| MaeII | ACGT | 2 cut(s) | 302, 1674 |
| MaeIII | GTNAC | 9 cut(s) | 343, 524, 847, 994, 1112, 1175, 2282, 2340, 2974 |
| MalI | GATC | 9 cut(s) | 266, 382, 674, 961, 1295, 1530, 2547, 2658, 3018 |
| MbiI | CCGCTC | 1 cut(s) | 1258 |
| MboI | GATC | 9 cut(s) | 264, 380, 672, 959, 1293, 1528, 2545, 2656, 3016 |
| MfeI | CAATTG | 1 cut(s) | 2738 |
| MflI | RGATCY | 3 cut(s) | 380, 672, 1528 |
| MhlI | GDGCHC | 4 cut(s) | 179, 275, 1772, 2174 |
| Mly113I | GGCGCC | 1 cut(s) | 1104 |
| MlyI | GAGTC | 1 cut(s) | 508 |
| MmeI | TCCRAC | 7 cut(s) | 152, 379, 718, 991, 1506, 1624, 3148 |
| Mph1103I | ATGCAT | 1 cut(s) | 2554 |
| MroI | TCCGGA | 2 cut(s) | 956, 1694 |
| MroNI | GCCGGC | 1 cut(s) | 941 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1363 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2454 |
| MspA1I | CMGCKG | 2 cut(s) | 1516, 2005 |
| MspR9I | CCNGG | 6 cut(s) | 195, 309, 590, 1274, 1975, 2080 |
| MunI | CAATTG | 1 cut(s) | 2738 |
| Mva1269I | GAATGC | 2 cut(s) | 1948, 2871 |
| MvaI | CCWGG | 2 cut(s) | 590, 1975 |
| MvnI | CGCG | 1 cut(s) | 620 |
| NaeI | GCCGGC | 1 cut(s) | 943 |
| NarI | GGCGCC | 1 cut(s) | 1104 |
| NciI | CCSGG | 4 cut(s) | 195, 309, 1274, 2080 |
| NcoI | CCATGG | 2 cut(s) | 1261, 2347 |
| NdeI | CATATG | 1 cut(s) | 2191 |
| NdeII | GATC | 9 cut(s) | 264, 380, 672, 959, 1293, 1528, 2545, 2656, 3016 |
| NgoMIV | GCCGGC | 1 cut(s) | 941 |
| NheI | GCTAGC | 1 cut(s) | 226 |
| NlaIV | GGNNCC | 7 cut(s) | 286, 382, 692, 1105, 1770, 1771, 3013 |
| NmeAIII | GCCGAG | 1 cut(s) | 594 |
| NmuCI | GTSAC | 5 cut(s) | 343, 524, 1112, 2282, 2974 |
| NsiI | ATGCAT | 1 cut(s) | 2554 |
| NspI | RCATGY | 7 cut(s) | 321, 398, 1120, 1690, 2433, 2705, 2920 |
| PaeR7I | CTCGAG | 2 cut(s) | 704, 1333 |
| PagI | TCATGA | 2 cut(s) | 267, 451 |
| PciI | ACATGT | 4 cut(s) | 394, 1686, 2701, 2916 |
| PciSI | GCTCTTC | 1 cut(s) | 2094 |
| PctI | GAATGC | 2 cut(s) | 1948, 2871 |
| PdiI | GCCGGC | 1 cut(s) | 943 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1363 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 398, 2822 |
| PinAI | ACCGGT | 1 cut(s) | 1622 |
| PkrI | GCNGC | 8 cut(s) | 34, 37, 1515, 1518, 1985, 2007, 2514, 3026 |
| PleI | GAGTC | 1 cut(s) | 507 |
| PluTI | GGCGCC | 1 cut(s) | 1107 |
| PmaCI | CACGTG | 1 cut(s) | 303 |
| PmlI | CACGTG | 1 cut(s) | 303 |
| PpsI | GAGTC | 1 cut(s) | 507 |
| Ppu21I | YACGTR | 1 cut(s) | 303 |
| PscI | ACATGT | 4 cut(s) | 394, 1686, 2701, 2916 |
| PsiI | TTATAA | 1 cut(s) | 2423 |
| Psp124BI | GAGCTC | 3 cut(s) | 179, 275, 2174 |
| Psp6I | CCWGG | 2 cut(s) | 588, 1973 |
| PspCI | CACGTG | 1 cut(s) | 303 |
| PspGI | CCWGG | 2 cut(s) | 588, 1973 |
| PspN4I | GGNNCC | 7 cut(s) | 286, 382, 692, 1105, 1770, 1771, 3013 |
| PspOMI | GGGCCC | 1 cut(s) | 1768 |
| PspPI | GGNCC | 6 cut(s) | 254, 709, 1031, 1625, 1768, 1769 |
| PstI | CTGCAG | 1 cut(s) | 37 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1516 |
| PsuI | RGATCY | 3 cut(s) | 380, 672, 1528 |
| PvuII | CAGCTG | 2 cut(s) | 1516, 2005 |
| RsaI | GTAC | 6 cut(s) | 137, 495, 814, 1920, 2267, 2483 |
| RsaNI | GTAC | 6 cut(s) | 136, 494, 813, 1919, 2266, 2482 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2454 |
| SacI | GAGCTC | 3 cut(s) | 179, 275, 2174 |
| SalI | GTCGAC | 2 cut(s) | 324, 2842 |
| SapI | GCTCTTC | 1 cut(s) | 2094 |
| SatI | GCNGC | 8 cut(s) | 33, 36, 1514, 1517, 1984, 2006, 2513, 3025 |
| Sau3AI | GATC | 9 cut(s) | 264, 380, 672, 959, 1293, 1528, 2545, 2656, 3016 |
| Sau96I | GGNCC | 6 cut(s) | 254, 709, 1031, 1625, 1768, 1769 |
| SchI | GAGTC | 1 cut(s) | 508 |
| ScrFI | CCNGG | 6 cut(s) | 195, 309, 590, 1274, 1975, 2080 |
| SduI | GDGCHC | 4 cut(s) | 179, 275, 1772, 2174 |
| SexAI | ACCWGGT | 1 cut(s) | 588 |
| SfcI | CTRYAG | 4 cut(s) | 33, 567, 721, 2860 |
| SfoI | GGCGCC | 1 cut(s) | 1105 |
| Sfr274I | CTCGAG | 2 cut(s) | 704, 1333 |
| SinI | GGWCC | 2 cut(s) | 1031, 1625 |
| SlaI | CTCGAG | 2 cut(s) | 704, 1333 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2454 |
| SmlI | CTYRAG | 5 cut(s) | 704, 1064, 1333, 2660, 3055 |
| SmoI | CTYRAG | 5 cut(s) | 704, 1064, 1333, 2660, 3055 |
| SpeI | ACTAGT | 1 cut(s) | 989 |
| SsiI | CCGC | 7 cut(s) | 321, 377, 1256, 1983, 1986, 2246, 2519 |
| SspDI | GGCGCC | 1 cut(s) | 1103 |
| SspI | AATATT | 1 cut(s) | 541 |
| SspMI | CTAG | 8 cut(s) | 227, 374, 990, 1373, 1427, 1499, 1710, 2093 |
| SstI | GAGCTC | 3 cut(s) | 179, 275, 2174 |
| StyD4I | CCNGG | 6 cut(s) | 193, 307, 588, 1272, 1973, 2078 |
| StyI | CCWWGG | 5 cut(s) | 188, 1261, 1498, 1714, 2347 |
| TaaI | ACNGT | 5 cut(s) | 284, 853, 1524, 2727, 2800 |
| TaiI | ACGT | 2 cut(s) | 305, 1677 |
| TaqII | GACCGA | 1 cut(s) | 2993 |
| TatI | WGTACW | 3 cut(s) | 135, 2265, 2481 |
| TauI | GCSGC | 1 cut(s) | 1986 |
| TscAI | CASTG | 8 cut(s) | 154, 159, 1041, 1555, 1635, 2328, 2914, 3026 |
| TseFI | GTSAC | 5 cut(s) | 343, 524, 1112, 2282, 2974 |
| TseI | GCWGC | 7 cut(s) | 32, 35, 1513, 1516, 2005, 2512, 3024 |
| Tsp45I | GTSAC | 5 cut(s) | 343, 524, 1112, 2282, 2974 |
| TspGWI | ACGGA | 9 cut(s) | 224, 263, 277, 669, 681, 850, 1013, 2142, 2508 |
| TspRI | CASTG | 8 cut(s) | 154, 159, 1041, 1555, 1635, 2328, 2914, 3026 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 398, 2822 |
| VpaK11BI | GGWCC | 2 cut(s) | 1031, 1625 |
| XapI | RAATTY | 8 cut(s) | 456, 600, 876, 1001, 1042, 1432, 1845, 2560 |
| XceI | RCATGY | 7 cut(s) | 321, 398, 1120, 1690, 2433, 2705, 2920 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1571 |
| XhoI | CTCGAG | 2 cut(s) | 704, 1333 |
| XmaJI | CCTAGG | 1 cut(s) | 1498 |
| XmiI | GTMKAC | 5 cut(s) | 325, 484, 720, 2843, 2859 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1363 |
| XspI | CTAG | 8 cut(s) | 227, 374, 990, 1373, 1427, 1499, 1710, 2093 |
| Zsp2I | ATGCAT | 1 cut(s) | 2554 |