Belongs to the protein kinase superfamily. Ser Thr protein kinase family
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 675 |
| AarI | CACCTGC | 1 cut(s) | 167 |
| Acc36I | ACCTGC | 2 cut(s) | 167, 322 |
| Acc65I | GGTACC | 1 cut(s) | 1181 |
| AccB1I | GGYRCC | 2 cut(s) | 1181, 2831 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 810, 1775, 2354, 2642 |
| AccI | GTMKAC | 3 cut(s) | 2112, 2409, 2679 |
| AciI | CCGC | 4 cut(s) | 233, 1830, 1833, 2835 |
| AclI | AACGTT | 1 cut(s) | 1521 |
| AclWI | GGATC | 6 cut(s) | 89, 216, 229, 508, 2113, 2623 |
| AcsI | RAATTY | 6 cut(s) | 316, 441, 717, 883, 1257, 1692 |
| AcuI | CTGAAG | 2 cut(s) | 1788, 2058 |
| AcyI | GRCGYC | 1 cut(s) | 153 |
| AfaI | GTAC | 3 cut(s) | 367, 1183, 1399 |
| AfeI | AGCGCT | 1 cut(s) | 1712 |
| AflII | CTTAAG | 1 cut(s) | 1217 |
| AflIII | ACRYGT | 4 cut(s) | 874, 2166, 2527, 2736 |
| AgeI | ACCGGT | 1 cut(s) | 1469 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2911, 2943 |
| Alw21I | GWGCWC | 1 cut(s) | 2009 |
| Alw26I | GTCTC | 2 cut(s) | 973, 2716 |
| AlwI | GGATC | 6 cut(s) | 89, 216, 229, 508, 2113, 2623 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1811 |
| Ama87I | CYCGRG | 2 cut(s) | 272, 545 |
| Aor51HI | AGCGCT | 1 cut(s) | 1712 |
| AoxI | GGCC | 2 cut(s) | 800, 1420 |
| ApaI | GGGCCC | 1 cut(s) | 804 |
| ApeKI | GCWGC | 4 cut(s) | 162, 2026, 2630, 2972 |
| ApoI | RAATTY | 6 cut(s) | 316, 441, 717, 883, 1257, 1692 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 947, 979 |
| AseI | ATTAAT | 1 cut(s) | 2421 |
| AsiGI | ACCGGT | 1 cut(s) | 1469 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1371 |
| Asp718I | GGTACC | 1 cut(s) | 1181 |
| AspA2I | CCTAGG | 1 cut(s) | 1342 |
| AspLEI | GCGC | 1 cut(s) | 1713 |
| AspS9I | GGNCC | 2 cut(s) | 800, 801 |
| AsuC2I | CCSGG | 3 cut(s) | 28, 799, 1930 |
| AsuHPI | GGTGA | 4 cut(s) | 148, 394, 965, 2525 |
| AvaI | CYCGRG | 2 cut(s) | 272, 545 |
| AvrII | CCTAGG | 1 cut(s) | 1342 |
| AxyI | CCTNAGG | 1 cut(s) | 1410 |
| BaeGI | GKGCMC | 1 cut(s) | 804 |
| BamHI | GGATCC | 1 cut(s) | 221 |
| BanI | GGYRCC | 2 cut(s) | 1181, 2831 |
| BanII | GRGCYC | 2 cut(s) | 804, 1620 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 646, 678, 1318, 1350 |
| BbsI | GAAGAC | 1 cut(s) | 2780 |
| Bbv12I | GWGCWC | 1 cut(s) | 2009 |
| BbvI | GCAGC | 4 cut(s) | 174, 2013, 2617, 2984 |
| BccI | CCATC | 6 cut(s) | 742, 812, 1193, 2057, 2356, 2741 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 536, 570 |
| BciVI | GTATCC | 1 cut(s) | 1060 |
| BclI | TGATCA | 2 cut(s) | 978, 2731 |
| BcnI | CCSGG | 3 cut(s) | 28, 799, 1930 |
| BcoDI | GTCTC | 2 cut(s) | 973, 2716 |
| BfmI | CTRYAG | 2 cut(s) | 160, 2680 |
| BfoI | RGCGCY | 1 cut(s) | 1714 |
| BfrI | CTTAAG | 1 cut(s) | 1217 |
| BfuAI | ACCTGC | 2 cut(s) | 167, 322 |
| BfuI | GTATCC | 1 cut(s) | 1060 |
| BisI | GCNGC | 5 cut(s) | 163, 1831, 2027, 2631, 2973 |
| BlnI | CCTAGG | 1 cut(s) | 1342 |
| BlsI | GCNGC | 5 cut(s) | 164, 1832, 2028, 2632, 2974 |
| Bme1390I | CCNGG | 3 cut(s) | 28, 799, 1930 |
| BmeT110I | CYCGRG | 2 cut(s) | 272, 545 |
| BmgT120I | GGNCC | 2 cut(s) | 800, 801 |
| BmiI | GGNNCC | 7 cut(s) | 223, 533, 802, 1183, 1474, 2359, 2833 |
| BmrFI | CCNGG | 3 cut(s) | 28, 799, 1930 |
| BmrI | ACTGGG | 2 cut(s) | 1112, 2724 |
| BmsI | GCATC | 3 cut(s) | 1122, 1338, 2353 |
| BmuI | ACTGGG | 2 cut(s) | 1112, 2724 |
| BpiI | GAAGAC | 1 cut(s) | 2780 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1154, 1186 |
| BpmI | CTGGAG | 1 cut(s) | 215 |
| BpuEI | CTTGAG | 4 cut(s) | 763, 979, 2248, 2471 |
| BpuMI | CCSGG | 3 cut(s) | 28, 799, 1930 |
| BsaBI | GATNNNNATC | 2 cut(s) | 226, 930 |
| BsaHI | GRCGYC | 1 cut(s) | 153 |
| BsaI | GGTCTC | 1 cut(s) | 2716 |
| BsaJI | CCNNGG | 4 cut(s) | 37, 809, 1342, 1561 |
| BsaWI | WCCGGW | 2 cut(s) | 683, 1469 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1390, 1420 |
| Bse118I | RCCGGY | 1 cut(s) | 1469 |
| Bse21I | CCTNAGG | 1 cut(s) | 1410 |
| Bse3DI | GCAATG | 3 cut(s) | 497, 754, 2290 |
| Bse8I | GATNNNNATC | 2 cut(s) | 226, 930 |
| BseDI | CCNNGG | 4 cut(s) | 37, 809, 1342, 1561 |
| BseGI | GGATG | 8 cut(s) | 657, 804, 1113, 1185, 1329, 1620, 2344, 2930 |
| BseJI | GATNNNNATC | 2 cut(s) | 226, 930 |
| BseMI | GCAATG | 3 cut(s) | 497, 754, 2290 |
| BseMII | CTCAG | 3 cut(s) | 469, 984, 1424 |
| BseRI | GAGGAG | 3 cut(s) | 294, 1398, 1899 |
| BseSI | GKGCMC | 1 cut(s) | 804 |
| BseXI | GCAGC | 4 cut(s) | 174, 2013, 2617, 2984 |
| BseYI | CCCAGC | 1 cut(s) | 199 |
| BsgI | GTGCAG | 1 cut(s) | 2616 |
| BshFI | GGCC | 2 cut(s) | 802, 1422 |
| BshNI | GGYRCC | 2 cut(s) | 1181, 2831 |
| BshTI | ACCGGT | 1 cut(s) | 1469 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2009 |
| BsiHKCI | CYCGRG | 2 cut(s) | 272, 545 |
| BsiSI | CCGG | 5 cut(s) | 27, 684, 798, 1470, 1929 |
| BslFI | GGGAC | 3 cut(s) | 863, 1045, 1959 |
| BsmAI | GTCTC | 2 cut(s) | 973, 2716 |
| BsmFI | GGGAC | 3 cut(s) | 863, 1045, 1959 |
| BsmI | GAATGC | 2 cut(s) | 585, 2691 |
| BsnI | GGCC | 2 cut(s) | 802, 1422 |
| Bso31I | GGTCTC | 1 cut(s) | 2716 |
| BsoBI | CYCGRG | 2 cut(s) | 272, 545 |
| Bsp120I | GGGCCC | 1 cut(s) | 800 |
| Bsp1286I | GDGCHC | 3 cut(s) | 804, 1620, 2009 |
| Bsp143I | GATC | 9 cut(s) | 94, 221, 513, 978, 1914, 2105, 2482, 2615, 2731 |
| BspACI | CCGC | 4 cut(s) | 233, 1830, 1833, 2835 |
| BspANI | GGCC | 2 cut(s) | 802, 1422 |
| BspCNI | CTCAG | 3 cut(s) | 468, 983, 1423 |
| BspLI | GGNNCC | 7 cut(s) | 223, 533, 802, 1183, 1474, 2359, 2833 |
| BspMAI | CTGCAG | 1 cut(s) | 164 |
| BspMI | ACCTGC | 2 cut(s) | 167, 322 |
| BspPI | GGATC | 6 cut(s) | 89, 216, 229, 508, 2113, 2623 |
| BspQI | GCTCTTC | 2 cut(s) | 2358, 2826 |
| BspT107I | GGYRCC | 2 cut(s) | 1181, 2831 |
| BspTI | CTTAAG | 1 cut(s) | 1217 |
| BspTNI | GGTCTC | 1 cut(s) | 2716 |
| BsrDI | GCAATG | 3 cut(s) | 497, 754, 2290 |
| BsrFI | RCCGGY | 1 cut(s) | 1469 |
| BssAI | RCCGGY | 1 cut(s) | 1469 |
| BssECI | CCNNGG | 4 cut(s) | 37, 809, 1342, 1561 |
| BssMI | GATC | 9 cut(s) | 94, 221, 513, 978, 1914, 2105, 2482, 2615, 2731 |
| BssNAI | GTATAC | 1 cut(s) | 2113 |
| BssNI | GRCGYC | 1 cut(s) | 153 |
| BssT1I | CCWWGG | 3 cut(s) | 37, 809, 1342 |
| Bst1107I | GTATAC | 1 cut(s) | 2113 |
| Bst4CI | ACNGT | 5 cut(s) | 851, 1701, 2146, 2459, 2513 |
| Bst6I | CTCTTC | 6 cut(s) | 735, 2077, 2358, 2714, 2826, 2883 |
| BstACI | GRCGYC | 1 cut(s) | 153 |
| BstAFI | CTTAAG | 1 cut(s) | 1217 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 68, 328 |
| BstC8I | GCNNGC | 2 cut(s) | 60, 2260 |
| BstDEI | CTNAG | 9 cut(s) | 248, 455, 574, 905, 970, 1410, 1579, 2187, 2329 |
| BstEII | GGTNACC | 1 cut(s) | 2513 |
| BstF5I | GGATG | 8 cut(s) | 657, 804, 1113, 1185, 1329, 1620, 2344, 2930 |
| BstH2I | RGCGCY | 1 cut(s) | 1714 |
| BstHHI | GCGC | 1 cut(s) | 1713 |
| BstKTI | GATC | 9 cut(s) | 97, 224, 516, 981, 1917, 2108, 2485, 2618, 2734 |
| BstMAI | GTCTC | 2 cut(s) | 973, 2716 |
| BstMBI | GATC | 9 cut(s) | 94, 221, 513, 978, 1914, 2105, 2482, 2615, 2731 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 68, 77, 159, 328, 1817 |
| BstNSI | RCATGY | 6 cut(s) | 145, 878, 2170, 2262, 2531, 2740 |
| BstPI | GGTNACC | 1 cut(s) | 2513 |
| BstSCI | CCNGG | 3 cut(s) | 26, 797, 1928 |
| BstSFI | CTRYAG | 2 cut(s) | 160, 2680 |
| BstSLI | GKGCMC | 1 cut(s) | 804 |
| BstV1I | GCAGC | 4 cut(s) | 174, 2013, 2617, 2984 |
| BstV2I | GAAGAC | 1 cut(s) | 2780 |
| BstX2I | RGATCY | 3 cut(s) | 221, 513, 2105 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1106 |
| BstYI | RGATCY | 3 cut(s) | 221, 513, 2105 |
| BstZ17I | GTATAC | 1 cut(s) | 2113 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1410 |
| BsuI | GTATCC | 1 cut(s) | 1060 |
| BsuRI | GGCC | 2 cut(s) | 802, 1422 |
| BtgZI | GCGATG | 2 cut(s) | 158, 2398 |
| BtsCI | GGATG | 8 cut(s) | 657, 804, 1113, 1185, 1329, 1620, 2344, 2930 |
| BtsIMutI | CAGTG | 5 cut(s) | 847, 867, 2455, 2749, 2845 |
| BveI | ACCTGC | 2 cut(s) | 167, 322 |
| Cac8I | GCNNGC | 2 cut(s) | 60, 2260 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1811 |
| CfoI | GCGC | 1 cut(s) | 1713 |
| Cfr10I | RCCGGY | 1 cut(s) | 1469 |
| Cfr13I | GGNCC | 2 cut(s) | 800, 801 |
| CseI | GACGC | 1 cut(s) | 142 |
| Csp6I | GTAC | 3 cut(s) | 366, 1182, 1398 |
| CspAI | ACCGGT | 1 cut(s) | 1469 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1180, 1215 |
| CviQI | GTAC | 3 cut(s) | 366, 1182, 1398 |
| DdeI | CTNAG | 9 cut(s) | 248, 455, 574, 905, 970, 1410, 1579, 2187, 2329 |
| DpnI | GATC | 9 cut(s) | 96, 223, 515, 980, 1916, 2107, 2484, 2617, 2733 |
| DpnII | GATC | 9 cut(s) | 94, 221, 513, 978, 1914, 2105, 2482, 2615, 2731 |
| DraI | TTTAAA | 3 cut(s) | 345, 1786, 2391 |
| Eam1104I | CTCTTC | 6 cut(s) | 735, 2077, 2358, 2714, 2826, 2883 |
| EarI | CTCTTC | 6 cut(s) | 735, 2077, 2358, 2714, 2826, 2883 |
| Eco130I | CCWWGG | 3 cut(s) | 37, 809, 1342 |
| Eco24I | GRGCYC | 2 cut(s) | 804, 1620 |
| Eco31I | GGTCTC | 1 cut(s) | 2716 |
| Eco47III | AGCGCT | 1 cut(s) | 1712 |
| Eco57I | CTGAAG | 2 cut(s) | 1788, 2058 |
| Eco81I | CCTNAGG | 1 cut(s) | 1410 |
| Eco88I | CYCGRG | 2 cut(s) | 272, 545 |
| Eco91I | GGTNACC | 1 cut(s) | 2513 |
| EcoO65I | GGTNACC | 1 cut(s) | 2513 |
| EcoRI | GAATTC | 1 cut(s) | 1257 |
| EcoT14I | CCWWGG | 3 cut(s) | 37, 809, 1342 |
| EcoT38I | GRGCYC | 2 cut(s) | 804, 1620 |
| ErhI | CCWWGG | 3 cut(s) | 37, 809, 1342 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 714, 746, 1786, 1818, 2109, 2141 |
| FaqI | GGGAC | 3 cut(s) | 863, 1045, 1959 |
| FauNDI | CATATG | 1 cut(s) | 2038 |
| FbaI | TGATCA | 2 cut(s) | 978, 2731 |
| FblI | GTMKAC | 3 cut(s) | 2112, 2409, 2679 |
| Fnu4HI | GCNGC | 5 cut(s) | 163, 1831, 2027, 2631, 2973 |
| FokI | GGATG | 8 cut(s) | 644, 791, 1100, 1172, 1316, 1607, 2331, 2937 |
| FriOI | GRGCYC | 2 cut(s) | 804, 1620 |
| Fsp4HI | GCNGC | 5 cut(s) | 163, 1831, 2027, 2631, 2973 |
| GlaI | GCGC | 1 cut(s) | 1712 |
| GluI | GCNGC | 5 cut(s) | 163, 1831, 2027, 2631, 2973 |
| GsaI | CCCAGC | 1 cut(s) | 203 |
| GsuI | CTGGAG | 1 cut(s) | 215 |
| HaeII | RGCGCY | 1 cut(s) | 1714 |
| HaeIII | GGCC | 2 cut(s) | 802, 1422 |
| HapII | CCGG | 5 cut(s) | 27, 684, 798, 1470, 1929 |
| HgaI | GACGC | 1 cut(s) | 142 |
| HhaI | GCGC | 1 cut(s) | 1713 |
| Hin1I | GRCGYC | 1 cut(s) | 153 |
| Hin6I | GCGC | 1 cut(s) | 1711 |
| HinP1I | GCGC | 1 cut(s) | 1711 |
| HincII | GTYRAC | 3 cut(s) | 1141, 1290, 2410 |
| HindII | GTYRAC | 3 cut(s) | 1141, 1290, 2410 |
| HindIII | AAGCTT | 2 cut(s) | 250, 470 |
| HpaI | GTTAAC | 1 cut(s) | 1290 |
| HpaII | CCGG | 5 cut(s) | 27, 684, 798, 1470, 1929 |
| HphI | GGTGA | 4 cut(s) | 148, 394, 965, 2525 |
| Hpy188I | TCNGA | 8 cut(s) | 634, 973, 1392, 2203, 2228, 2536, 2612, 2800 |
| Hpy99I | CGWCG | 1 cut(s) | 171 |
| HpyCH4III | ACNGT | 5 cut(s) | 851, 1701, 2146, 2459, 2513 |
| HpyCH4IV | ACGT | 3 cut(s) | 636, 1034, 1521 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 68, 77, 159, 328, 1817 |
| HpyF3I | CTNAG | 9 cut(s) | 248, 455, 574, 905, 970, 1410, 1579, 2187, 2329 |
| HpySE526I | ACGT | 3 cut(s) | 636, 1034, 1521 |
| Hsp92I | GRCGYC | 1 cut(s) | 153 |
| HspAI | GCGC | 1 cut(s) | 1711 |
| KpnI | GGTACC | 1 cut(s) | 1185 |
| Ksp22I | TGATCA | 2 cut(s) | 978, 2731 |
| KspAI | GTTAAC | 1 cut(s) | 1290 |
| Kzo9I | GATC | 9 cut(s) | 94, 221, 513, 978, 1914, 2105, 2482, 2615, 2731 |
| LguI | GCTCTTC | 2 cut(s) | 2358, 2826 |
| LmnI | GCTCC | 5 cut(s) | 196, 1760, 2180, 2325, 2603 |
| Lsp1109I | GCAGC | 4 cut(s) | 174, 2013, 2617, 2984 |
| LweI | GCATC | 3 cut(s) | 1122, 1338, 2353 |
| MaeII | ACGT | 3 cut(s) | 636, 1034, 1521 |
| MaeIII | GTNAC | 9 cut(s) | 106, 154, 184, 559, 953, 1156, 2169, 2513, 2869 |
| MalI | GATC | 9 cut(s) | 96, 223, 515, 980, 1916, 2107, 2484, 2617, 2733 |
| MboI | GATC | 9 cut(s) | 94, 221, 513, 978, 1914, 2105, 2482, 2615, 2731 |
| MfeI | CAATTG | 2 cut(s) | 388, 2861 |
| MflI | RGATCY | 3 cut(s) | 221, 513, 2105 |
| MhlI | GDGCHC | 3 cut(s) | 804, 1620, 2009 |
| MlyI | GAGTC | 4 cut(s) | 27, 119, 1818, 2930 |
| MmeI | TCCRAC | 4 cut(s) | 1102, 1286, 2487, 2559 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1371 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2766 |
| MspA1I | CMGCKG | 1 cut(s) | 2975 |
| MspCI | CTTAAG | 1 cut(s) | 1217 |
| MspI | CCGG | 5 cut(s) | 27, 684, 798, 1470, 1929 |
| MspR9I | CCNGG | 3 cut(s) | 28, 799, 1930 |
| MunI | CAATTG | 2 cut(s) | 388, 2861 |
| Mva1269I | GAATGC | 2 cut(s) | 585, 2691 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 68, 77, 159, 328, 1817 |
| NciI | CCSGG | 3 cut(s) | 28, 799, 1930 |
| NdeI | CATATG | 1 cut(s) | 2038 |
| NdeII | GATC | 9 cut(s) | 94, 221, 513, 978, 1914, 2105, 2482, 2615, 2731 |
| NlaIV | GGNNCC | 7 cut(s) | 223, 533, 802, 1183, 1474, 2359, 2833 |
| NmeAIII | GCCGAG | 2 cut(s) | 808, 1542 |
| NmuCI | GTSAC | 5 cut(s) | 106, 154, 184, 953, 2513 |
| NspI | RCATGY | 6 cut(s) | 145, 878, 2170, 2262, 2531, 2740 |
| PaeI | GCATGC | 1 cut(s) | 2262 |
| PaeR7I | CTCGAG | 2 cut(s) | 272, 545 |
| PaqCI | CACCTGC | 1 cut(s) | 167 |
| PciI | ACATGT | 4 cut(s) | 874, 2166, 2527, 2736 |
| PciSI | GCTCTTC | 2 cut(s) | 2358, 2826 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1569 |
| PctI | GAATGC | 2 cut(s) | 585, 2691 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1371 |
| PfeI | GAWTC | 8 cut(s) | 787, 1132, 1504, 1651, 1729, 2248, 2607, 2755 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 810, 1775, 2354, 2642 |
| PinAI | ACCGGT | 1 cut(s) | 1469 |
| PkrI | GCNGC | 5 cut(s) | 164, 1832, 2028, 2632, 2974 |
| PleI | GAGTC | 4 cut(s) | 27, 119, 1818, 2930 |
| PpsI | GAGTC | 4 cut(s) | 27, 119, 1818, 2930 |
| PscI | ACATGT | 4 cut(s) | 874, 2166, 2527, 2736 |
| PshBI | ATTAAT | 1 cut(s) | 2421 |
| PsiI | TTATAA | 1 cut(s) | 675 |
| Psp1406I | AACGTT | 1 cut(s) | 1521 |
| PspEI | GGTNACC | 1 cut(s) | 2513 |
| PspFI | CCCAGC | 1 cut(s) | 199 |
| PspN4I | GGNNCC | 7 cut(s) | 223, 533, 802, 1183, 1474, 2359, 2833 |
| PspOMI | GGGCCC | 1 cut(s) | 800 |
| PspPI | GGNCC | 2 cut(s) | 800, 801 |
| PstI | CTGCAG | 1 cut(s) | 164 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1811 |
| PsuI | RGATCY | 3 cut(s) | 221, 513, 2105 |
| PvuII | CAGCTG | 1 cut(s) | 2975 |
| RsaI | GTAC | 3 cut(s) | 367, 1183, 1399 |
| RsaNI | GTAC | 3 cut(s) | 366, 1182, 1398 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2766 |
| SalI | GTCGAC | 1 cut(s) | 2408 |
| SapI | GCTCTTC | 2 cut(s) | 2358, 2826 |
| SatI | GCNGC | 5 cut(s) | 163, 1831, 2027, 2631, 2973 |
| Sau3AI | GATC | 9 cut(s) | 94, 221, 513, 978, 1914, 2105, 2482, 2615, 2731 |
| Sau96I | GGNCC | 2 cut(s) | 800, 801 |
| SchI | GAGTC | 4 cut(s) | 27, 119, 1818, 2930 |
| ScrFI | CCNGG | 3 cut(s) | 28, 799, 1930 |
| SduI | GDGCHC | 3 cut(s) | 804, 1620, 2009 |
| SfaNI | GCATC | 3 cut(s) | 1122, 1338, 2353 |
| SfcI | CTRYAG | 2 cut(s) | 160, 2680 |
| Sfr274I | CTCGAG | 2 cut(s) | 272, 545 |
| SlaI | CTCGAG | 2 cut(s) | 272, 545 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2766 |
| SmlI | CTYRAG | 7 cut(s) | 272, 545, 742, 958, 1217, 2263, 2486 |
| SmoI | CTYRAG | 7 cut(s) | 272, 545, 742, 958, 1217, 2263, 2486 |
| SphI | GCATGC | 1 cut(s) | 2262 |
| SsiI | CCGC | 4 cut(s) | 233, 1830, 1833, 2835 |
| SspI | AATATT | 2 cut(s) | 912, 2959 |
| StyD4I | CCNGG | 3 cut(s) | 26, 797, 1928 |
| StyI | CCWWGG | 3 cut(s) | 37, 809, 1342 |
| TaaI | ACNGT | 5 cut(s) | 851, 1701, 2146, 2459, 2513 |
| TaiI | ACGT | 3 cut(s) | 639, 1037, 1524 |
| TaqI | TCGA | 8 cut(s) | 273, 546, 1000, 1654, 1707, 1849, 2233, 2409 |
| TauI | GCSGC | 1 cut(s) | 1833 |
| TfiI | GAWTC | 8 cut(s) | 787, 1132, 1504, 1651, 1729, 2248, 2607, 2755 |
| TscAI | CASTG | 5 cut(s) | 854, 874, 2462, 2749, 2845 |
| TseFI | GTSAC | 5 cut(s) | 106, 154, 184, 953, 2513 |
| TseI | GCWGC | 4 cut(s) | 162, 2026, 2630, 2972 |
| Tsp45I | GTSAC | 5 cut(s) | 106, 154, 184, 953, 2513 |
| TspGWI | ACGGA | 2 cut(s) | 65, 1175 |
| TspRI | CASTG | 5 cut(s) | 854, 874, 2462, 2749, 2845 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 810, 1775, 2354, 2642 |
| Vha464I | CTTAAG | 1 cut(s) | 1217 |
| VspI | ATTAAT | 1 cut(s) | 2421 |
| XapI | RAATTY | 6 cut(s) | 316, 441, 717, 883, 1257, 1692 |
| XbaI | TCTAGA | 2 cut(s) | 1069, 1318 |
| XceI | RCATGY | 6 cut(s) | 145, 878, 2170, 2262, 2531, 2740 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1022 |
| XhoI | CTCGAG | 2 cut(s) | 272, 545 |
| XmaJI | CCTAGG | 1 cut(s) | 1342 |
| XmiI | GTMKAC | 3 cut(s) | 2112, 2409, 2679 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1371 |