RchiOBHm_Chr5g0043551
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
38620551 .. 38623762
3212 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ32184

Sequence Viewer

Length: 2934 bp
ATGCGGGTTTTGGCTGTGGAAGTGATCTTAATAGTATGCTCTCTTTCAAGTGCAATATTTGTTTGCTGTCTTAACTCCTCCATGCATTTGGACCAACCCTTCACCTCTAGGCTGAAAGGAAATGAAACCGATAGGCTGGCACTCTTATCCATCAAAGGCAACATACAGCATGATCCCAACCGCGTCCTGAGCTCCTGGAATAACTCCATTCACTTCTGCTTGTGGCACGGTGTCACTTGCAGTTCAAGGCATCGTCAGAGAGTCACCATGCTGGACCTCAACTCCCAAGGCCTGGCTGGCTCCATATCCCCACACATAGGAAATCTGAGCTTTCTAAGGGATCTTCGCCTCCATAACAATAGCTTCTCTCAAGAAATTCCTCCACAAATTGGGCATTTGCGTAGGTTACAGGTATTGGATTTAGAGAATAACTCATTTATTGGCCGTATTCCTGCCAACATATCCAATTGCTTCAACCTCATCTCTCTCTCCTTTAGTCGCAACAAACTGGCGGGTGAAATTCCTTCCAATCTTGGTTTCTTGTCTAAGCTTCAAAAACTTGTTTTACAATCTAACAATCTAACGGGAGAAATCTCTCCTTCCTTGGGGAACCTTTCATCTCTTACAGTATTTGCTGCATTTGATAACAACTTAGTGGGGAGCATACCTAGTTCTCTAGGCCAATTGAAAATGTTAACCTTTTTCTCGTTGGGCCAAAATAAGTTGTCTGGTACCATCCCTCCTTCCATTTACAACTTATCGGCTATTGTTACTTTTTATGTGGCTTTTAACCAAATTCAGGGGAGTATTCCCTCACACTTGACCACTGCATTTCTTAACCTCAAGGTCTTTAACATTAATGATAATGAATTTACTGGGGTCATTCCTGTGTCGATATCCAATGGAACAAGTCTCGTGTCGTTCAATGTTGGACGTAACAATCTAACTGGACAAGTGCCCAATTTGCAAAAGGTTCATAACCTCAGAACATTCATTGTTCTGTCTAATCATCTCGGAAGCGGTAAACAAGGCGACCTGAGCTTTGTCTCAGAGTTGATGAATGCCACACAGTTAAGACGGTTGGGTTTAGGCTTCAATAATTTCGGAGGGACATTGCCCACATCAATATCCAATCTTTCAACCAGTCTTCAAATGCTTTGGGTTGAACGAAACCAACTACATGGAAGCATCCCAACTGGTTTAGAAAATCTTGTGAATTTGCAATCACTGATTTTGGAGGTAAACTCCTTCACTGGTAGCATCCCCGCTGACATTGGGAAGCTTTCGACGCTTGGGGAATTGTATCTTGACTACAACCAATTATCAGGAAGCATTCCATCTTCTCTTGGAAATTTAACCATGTTAAGCCGTCTTTACTTGCTAGCAAATAATCTTAGCGGCAGCATCCCTTCGAGTCTAGAGAAATGCCACGAGTTGTTGGAACTGGATCTTTCTCAAAATAACCTTAATGGTACAATACCCCAGCAACTACTTATTGGCCTCCTCTCCTTATCAATTTCTCTCGACTTGTCCAGAAACCACTTTGTTGGTTCCCTTCCTGTGCAGATCGGCAAGTTGAGGAATCTAGGCGTACTTGACGTTTCTGAGAACATGACATATTCCACTGTTTTTAAGGACTTTGGAAACTTGGAGTATTTGAACCTATCCTTCAATCACTTATGGGGGGGAGTACCAATTGAAGGTGTTTTTAAGAATGCAAGTGCAACATCAGTTGTTGGAAATGCTGCACTCTGCGGAGGTATTGCAGAGCTTCAACTACCTGTGTGCAAATCTGAAGTGTCTAAAGCAAGAGGTTTGTCTCGCACAATAAAAATAGTTATGGCTTTAGTATCCGGGTTTACTTTGTTGGTAATTGCTATAATGCTATCCTTTTTACTTCATTGTAAGAAAAGGAAAGCAATTGAGTTGAGCACTTTGGGGAACTCGGTTTTGCGAGTCTCATATGCTACGCTCCTAAAAGCAACTGATGAGTTTTCTCCCACTAATTTGATTGGTGAGGGTGGTTTTGGTACTGTGTACAAAGGAATTCTCGATCTTGATAGAGTTGTTGCTGTAAAGGTACTTAACATGTTATACAGGGGGGCTTCAAAGAGTTTCATAGCTGAATGTGACGCACTGAGAAACATCAGGCATCGAAATCTAGTCAAGATTATAACTGCATGTTCAAGTGTTGATTTTCGTGGGAATGATTTCAAGGCTCTAGTTTATGAATTCATGGAAAATGGGAGCTTAGAAGAGTGGTTGCATCTAACCAGTGGAATTGAAACGGTAATAGATGCACCCAAAACTTTAAGTCTTGTCCAGAGGCTCGATATCGCCATTGATGTTGCTTCTGCATTGGATTATCTTCACGATCATTGTGAAACACCAATAGTTCATTGTGATCTCAAACCAAGTAATGTTCTTTTGGACAAAGAGCTGACTGCACATGTTTCCGACTTTGGGTTGGCAAGGTTTCTCTCAAAATTAACTGATAACGTTTCTGGAAATCAATCAAGCTCCATTGGAATAAGAGGATCGGTTGGTTATGCTGCTCCAGAGTATGGTATGGGAAGTGAGGTGTCAACATATGGGGATGTGTACAGCTTTGGCATTCTCTTATTAGAAATGTTTACTGGGAAGAGACCTACTGATCCTATGTTCAATGACGGCTTGAATCTTCATAACTTTGTGAAGATGGCTCTACCTGAACATGTTGAGGAGATTACGGATTCACTACTTGAAGGAGGCATCACCACTATCGATGAAGCTCGCAATCAACCCATCGCAAGTCCACCACAGAAGATTGAAGAGTGCTTGACGTTGATATTTGGAATTGGAATTGCATGTTCTGCTGAATCCCCAACAAACCGAAAGGATATAAGTGATGTTGTATCTGAATTGCACACCATCAGGAACAATCTTCTTGGCTAG

Protein Analysis

977

Amino Acids

106.36

Weight (kDa)

6.42

Isoelectric Point (pI)

37.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 42 - 81 2.7e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 90 - 211 1.6e-13 Leucine-rich repeat region
LRR_14 PF23598 318 - 487 6.8e-09 Leucine-rich repeat region
Pkinase PF00069 668 - 889 1.2e-36 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 669 - 890 2.8e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2174
Acc65I GGTACC 1 cut(s) 731
AccB1I GGYRCC 1 cut(s) 731
AccB7I CCANNNNNTGG 3 cut(s) 292, 389, 2564
AccII CGCG 1 cut(s) 183
AciI CCGC 7 cut(s) 4, 181, 512, 1020, 1266, 1398, 1755
AclI AACGTT 1 cut(s) 2499
AclWI GGATC 5 cut(s) 167, 348, 1455, 2545, 2648
AcoI YGGCCR 1 cut(s) 442
AcsI RAATTY 8 cut(s) 375, 519, 795, 869, 1216, 1351, 2046, 2231
AcuI CTGAAG 1 cut(s) 1815
AfaI GTAC 8 cut(s) 733, 1474, 1593, 1692, 2032, 2039, 2082, 2603
AfiI CCNNNNNNNGG 8 cut(s) 292, 317, 389, 605, 799, 1700, 2463, 2564
AflIII ACRYGT 3 cut(s) 2088, 2449, 2713
AjnI CCWGG 2 cut(s) 194, 291
AjuI GAANNNNNNNTTGG 2 cut(s) 521, 553
Alw21I GWGCWC 2 cut(s) 194, 1934
Alw26I GTCTC 5 cut(s) 917, 1051, 1824, 1963, 2638
AlwI GGATC 5 cut(s) 167, 348, 1455, 2545, 2648
AoxI GGCC 5 cut(s) 289, 442, 679, 712, 1498
ApeKI GCWGC 4 cut(s) 635, 1401, 1745, 2552
ApoI RAATTY 8 cut(s) 375, 519, 795, 869, 1216, 1351, 2046, 2231
ArsI GACNNNNNNTTYG 2 cut(s) 1025, 1057
AseI ATTAAT 1 cut(s) 858
Asp700I GAANNNNTTC 1 cut(s) 2210
Asp718I GGTACC 1 cut(s) 731
AspS9I GGNCC 3 cut(s) 91, 274, 712
AsuC2I CCSGG 1 cut(s) 1855
AsuHPI GGTGA 5 cut(s) 94, 256, 527, 2027, 2746
AsuNHI GCTAGC 1 cut(s) 1381
AvaII GGWCC 2 cut(s) 91, 274
BaeGI GKGCMC 1 cut(s) 960
BanI GGYRCC 1 cut(s) 731
BanII GRGCYC 1 cut(s) 194
BauI CACGAG 2 cut(s) 914, 1430
BbsI GAAGAC 1 cut(s) 1139
Bbv12I GWGCWC 2 cut(s) 194, 1934
BbvI GCAGC 4 cut(s) 622, 1413, 1732, 2539
BccI CCATC 6 cut(s) 158, 743, 1345, 2692, 2792, 2918
BceAI ACGGC 3 cut(s) 429, 1353, 2686
BciT130I CCWGG 2 cut(s) 196, 293
BciVI GTATCC 1 cut(s) 1861
BcnI CCSGG 1 cut(s) 1855
BcoDI GTCTC 5 cut(s) 917, 1051, 1824, 1963, 2638
BfaI CTAG 9 cut(s) 108, 669, 677, 1382, 1418, 1586, 2162, 2222, 2932
BfuI GTATCC 1 cut(s) 1861
BglI GCCNNNNNGGC 1 cut(s) 297
BisI GCNGC 5 cut(s) 636, 1399, 1402, 1746, 2553
BlsI GCNGC 5 cut(s) 637, 1400, 1403, 1747, 2554
Bme1390I CCNGG 3 cut(s) 196, 293, 1855
Bme18I GGWCC 2 cut(s) 91, 274
BmgT120I GGNCC 3 cut(s) 91, 274, 712
BmiI GGNNCC 4 cut(s) 301, 611, 733, 1552
BmrFI CCNGG 3 cut(s) 196, 293, 1855
BmrI ACTGGG 2 cut(s) 885, 2646
BmsI GCATC 8 cut(s) 259, 1197, 1269, 1413, 2161, 2275, 2287, 2760
BmtI GCTAGC 1 cut(s) 1385
BmuI ACTGGG 2 cut(s) 885, 2646
BpiI GAAGAC 1 cut(s) 1139
BplI GAGNNNNNCTC 4 cut(s) 416, 448, 1229, 1261
BpmI CTGGAG 1 cut(s) 2541
Bpu10I CCTNAGC 2 cut(s) 188, 1037
BpuEI CTTGAG 2 cut(s) 354, 827
BpuMI CCSGG 1 cut(s) 1855
Bsa29I ATCGAT 1 cut(s) 2763
BsaI GGTCTC 1 cut(s) 2638
BsaJI CCNNGG 2 cut(s) 286, 603
BsaXI ACNNNNNCTCC 4 cut(s) 266, 296, 724, 754
Bsc4I CCNNNNNNNGG 8 cut(s) 292, 317, 389, 605, 799, 1700, 2463, 2564
Bse1I ACTGG 9 cut(s) 513, 880, 952, 1143, 1201, 1258, 1449, 2274, 2641
Bse3DI GCAATG 1 cut(s) 1112
BseBI CCWGG 2 cut(s) 196, 293
BseCI ATCGAT 1 cut(s) 2763
BseDI CCNNGG 2 cut(s) 286, 603
BseGI GGATG 5 cut(s) 735, 1188, 1260, 1404, 2602
BseLI CCNNNNNNNGG 8 cut(s) 292, 317, 389, 605, 799, 1700, 2463, 2564
BseMI GCAATG 1 cut(s) 1112
BseMII CTCAG 7 cut(s) 179, 317, 997, 1028, 1062, 1596, 2129
BseNI ACTGG 9 cut(s) 513, 880, 952, 1143, 1201, 1258, 1449, 2274, 2641
BseRI GAGGAG 3 cut(s) 67, 1493, 2735
BseSI GKGCMC 1 cut(s) 960
BseXI GCAGC 4 cut(s) 622, 1413, 1732, 2539
BseYI CCCAGC 1 cut(s) 1482
BsgI GTGCAG 3 cut(s) 1583, 1731, 2430
Bsh1236I CGCG 1 cut(s) 183
BshFI GGCC 5 cut(s) 291, 444, 681, 714, 1500
BshNI GGYRCC 1 cut(s) 731
BshVI ATCGAT 1 cut(s) 2763
BsiHKAI GWGCWC 2 cut(s) 194, 1934
BsiSI CCGG 1 cut(s) 1854
BslFI GGGAC 1 cut(s) 1123
BslI CCNNNNNNNGG 8 cut(s) 292, 317, 389, 605, 799, 1700, 2463, 2564
BsmAI GTCTC 5 cut(s) 917, 1051, 1824, 1963, 2638
BsmFI GGGAC 1 cut(s) 1123
BsmI GAATGC 4 cut(s) 1066, 1332, 1720, 2613
BsnI GGCC 5 cut(s) 291, 444, 681, 714, 1500
Bso31I GGTCTC 1 cut(s) 2638
Bsp1286I GDGCHC 3 cut(s) 194, 960, 1934
Bsp1407I TGTACA 2 cut(s) 2037, 2601
BspACI CCGC 7 cut(s) 4, 181, 512, 1020, 1266, 1398, 1755
BspANI GGCC 5 cut(s) 291, 444, 681, 714, 1500
BspCNI CTCAG 7 cut(s) 180, 318, 996, 1029, 1061, 1597, 2130
BspDI ATCGAT 1 cut(s) 2763
BspFNI CGCG 1 cut(s) 183
BspLI GGNNCC 4 cut(s) 301, 611, 733, 1552
BspOI GCTAGC 1 cut(s) 1385
BspPI GGATC 5 cut(s) 167, 348, 1455, 2545, 2648
BspT107I GGYRCC 1 cut(s) 731
BspTNI GGTCTC 1 cut(s) 2638
BsrDI GCAATG 1 cut(s) 1112
BsrGI TGTACA 2 cut(s) 2037, 2601
BsrI ACTGG 9 cut(s) 513, 880, 952, 1143, 1201, 1258, 1449, 2274, 2641
BssECI CCNNGG 2 cut(s) 286, 603
BssSI CACGAG 2 cut(s) 914, 1430
BssT1I CCWWGG 2 cut(s) 286, 603
Bst2BI CACGAG 2 cut(s) 914, 1430
Bst2UI CCWGG 2 cut(s) 196, 293
Bst4CI ACNGT 7 cut(s) 230, 628, 1071, 1080, 1627, 2035, 2290
Bst6I CTCTTC 3 cut(s) 2250, 2636, 2805
BstAPI GCANNNNNTGC 1 cut(s) 2852
BstAUI TGTACA 2 cut(s) 2037, 2601
BstC8I GCNNGC 4 cut(s) 138, 298, 1383, 2773
BstF5I GGATG 5 cut(s) 735, 1188, 1260, 1404, 2602
BstFNI CGCG 1 cut(s) 183
BstMAI GTCTC 5 cut(s) 917, 1051, 1824, 1963, 2638
BstMWI GCNNNNNNNGC 6 cut(s) 189, 297, 964, 1038, 1288, 2852
BstNI CCWGG 2 cut(s) 196, 293
BstNSI RCATGY 5 cut(s) 2092, 2184, 2453, 2717, 2850
BstSCI CCNGG 3 cut(s) 194, 291, 1853
BstSLI GKGCMC 1 cut(s) 960
BstUI CGCG 1 cut(s) 183
BstV1I GCAGC 4 cut(s) 622, 1413, 1732, 2539
BstV2I GAAGAC 1 cut(s) 1139
BstX2I RGATCY 2 cut(s) 340, 1447
BstXI CCANNNNNNTGG 3 cut(s) 88, 1181, 1547
BstYI RGATCY 2 cut(s) 340, 1447
Bsu15I ATCGAT 1 cut(s) 2763
BsuI GTATCC 1 cut(s) 1861
BsuRI GGCC 5 cut(s) 291, 444, 681, 714, 1500
BsuTUI ATCGAT 1 cut(s) 2763
BtgZI GCGATG 1 cut(s) 2770
BtsCI GGATG 5 cut(s) 735, 1188, 1260, 1404, 2602
BtsI GCAGTG 1 cut(s) 825
BtsIMutI CAGTG 6 cut(s) 825, 1226, 1251, 1623, 2135, 2281
Cac8I GCNNGC 4 cut(s) 138, 298, 1383, 2773
Cfr13I GGNCC 3 cut(s) 91, 274, 712
ClaI ATCGAT 1 cut(s) 2763
CseI GACGC 3 cut(s) 172, 1297, 2141
Csp6I GTAC 8 cut(s) 732, 1473, 1592, 1691, 2031, 2038, 2081, 2602
CviQI GTAC 8 cut(s) 732, 1473, 1592, 1691, 2031, 2038, 2081, 2602
EaeI YGGCCR 1 cut(s) 442
Eam1104I CTCTTC 3 cut(s) 2250, 2636, 2805
EarI CTCTTC 3 cut(s) 2250, 2636, 2805
Ecl136II GAGCTC 1 cut(s) 192
Eco130I CCWWGG 2 cut(s) 286, 603
Eco147I AGGCCT 1 cut(s) 291
Eco24I GRGCYC 1 cut(s) 194
Eco31I GGTCTC 1 cut(s) 2638
Eco32I GATATC 2 cut(s) 897, 2335
Eco47I GGWCC 2 cut(s) 91, 274
Eco53kI GAGCTC 1 cut(s) 192
Eco57I CTGAAG 1 cut(s) 1815
EcoICRI GAGCTC 1 cut(s) 192
EcoRI GAATTC 2 cut(s) 2046, 2231
EcoRII CCWGG 2 cut(s) 194, 291
EcoRV GATATC 2 cut(s) 897, 2335
EcoT14I CCWWGG 2 cut(s) 286, 603
EcoT22I ATGCAT 1 cut(s) 87
EcoT38I GRGCYC 1 cut(s) 194
ErhI CCWWGG 2 cut(s) 286, 603
FaqI GGGAC 1 cut(s) 1123
FauI CCCGC 2 cut(s) 505, 1273
FauNDI CATATG 2 cut(s) 1963, 2590
Fnu4HI GCNGC 5 cut(s) 636, 1399, 1402, 1746, 2553
FokI GGATG 5 cut(s) 722, 1175, 1247, 1391, 2609
FriOI GRGCYC 1 cut(s) 194
Fsp4HI GCNGC 5 cut(s) 636, 1399, 1402, 1746, 2553
FspBI CTAG 9 cut(s) 108, 669, 677, 1382, 1418, 1586, 2162, 2222, 2932
GluI GCNGC 5 cut(s) 636, 1399, 1402, 1746, 2553
GsaI CCCAGC 1 cut(s) 1486
GsuI CTGGAG 1 cut(s) 2541
HaeIII GGCC 5 cut(s) 291, 444, 681, 714, 1500
HapII CCGG 1 cut(s) 1854
HgaI GACGC 3 cut(s) 172, 1297, 2141
HincII GTYRAC 2 cut(s) 696, 2586
HindII GTYRAC 2 cut(s) 696, 2586
HindIII AAGCTT 2 cut(s) 548, 1280
HinfI GANTC 7 cut(s) 261, 1414, 1582, 1956, 2677, 2732, 2858
HpaI GTTAAC 1 cut(s) 696
HpaII CCGG 1 cut(s) 1854
HphI GGTGA 5 cut(s) 94, 256, 527, 2027, 2746
Hpy166II GTNNAC 9 cut(s) 696, 1025, 1243, 1860, 2038, 2586, 2602, 2634, 2795
Hpy8I GTNNAC 9 cut(s) 696, 1025, 1243, 1860, 2038, 2586, 2602, 2634, 2795
Hpy99I CGWCG 1 cut(s) 1291
HpyCH4III ACNGT 7 cut(s) 230, 628, 1071, 1080, 1627, 2035, 2290
HpyCH4IV ACGT 4 cut(s) 934, 1599, 2499, 2822
HpyF10VI GCNNNNNNNGC 6 cut(s) 189, 297, 964, 1038, 1288, 2852
HpySE526I ACGT 4 cut(s) 934, 1599, 2499, 2822
KpnI GGTACC 1 cut(s) 735
KspAI GTTAAC 1 cut(s) 696
LmnI GCTCC 7 cut(s) 197, 305, 660, 1977, 2247, 2525, 2560
Lsp1109I GCAGC 4 cut(s) 622, 1413, 1732, 2539
LweI GCATC 8 cut(s) 259, 1197, 1269, 1413, 2161, 2275, 2287, 2760
MaeI CTAG 9 cut(s) 108, 669, 677, 1382, 1418, 1586, 2162, 2222, 2932
MaeII ACGT 4 cut(s) 934, 1599, 2499, 2822
MaeIII GTNAC 6 cut(s) 232, 262, 405, 769, 935, 2129
MfeI CAATTG 4 cut(s) 466, 683, 1695, 1920
MflI RGATCY 2 cut(s) 340, 1447
MhlI GDGCHC 3 cut(s) 194, 960, 1934
MlyI GAGTC 3 cut(s) 270, 1423, 1965
MmeI TCCRAC 4 cut(s) 910, 1419, 1717, 2481
Mph1103I ATGCAT 1 cut(s) 87
MroXI GAANNNNTTC 1 cut(s) 2210
MslI CAYNNNNRTG 1 cut(s) 887
MspA1I CMGCKG 1 cut(s) 1268
MspI CCGG 1 cut(s) 1854
MspR9I CCNGG 3 cut(s) 196, 293, 1855
MunI CAATTG 4 cut(s) 466, 683, 1695, 1920
Mva1269I GAATGC 4 cut(s) 1066, 1332, 1720, 2613
MvaI CCWGG 2 cut(s) 196, 293
MvnI CGCG 1 cut(s) 183
MwoI GCNNNNNNNGC 6 cut(s) 189, 297, 964, 1038, 1288, 2852
NciI CCSGG 1 cut(s) 1855
NdeI CATATG 2 cut(s) 1963, 2590
NheI GCTAGC 1 cut(s) 1381
NlaIV GGNNCC 4 cut(s) 301, 611, 733, 1552
NmuCI GTSAC 3 cut(s) 232, 262, 2129
NsiI ATGCAT 1 cut(s) 87
NspI RCATGY 5 cut(s) 2092, 2184, 2453, 2717, 2850
PceI AGGCCT 1 cut(s) 291
PciI ACATGT 3 cut(s) 2088, 2449, 2713
PctI GAATGC 4 cut(s) 1066, 1332, 1720, 2613
PdmI GAANNNNTTC 1 cut(s) 2210
PfeI GAWTC 4 cut(s) 1582, 2677, 2732, 2858
PflMI CCANNNNNTGG 3 cut(s) 292, 389, 2564
PfoI TCCNGGA 1 cut(s) 194
PkrI GCNGC 5 cut(s) 637, 1400, 1403, 1747, 2554
PleI GAGTC 3 cut(s) 269, 1422, 1964
PpsI GAGTC 3 cut(s) 269, 1422, 1964
PscI ACATGT 3 cut(s) 2088, 2449, 2713
PshBI ATTAAT 1 cut(s) 858
PsiI TTATAA 1 cut(s) 2174
Psp124BI GAGCTC 1 cut(s) 194
Psp1406I AACGTT 1 cut(s) 2499
Psp6I CCWGG 2 cut(s) 194, 291
PspFI CCCAGC 1 cut(s) 1482
PspGI CCWGG 2 cut(s) 194, 291
PspN4I GGNNCC 4 cut(s) 301, 611, 733, 1552
PspPI GGNCC 3 cut(s) 91, 274, 712
PsuI RGATCY 2 cut(s) 340, 1447
RsaI GTAC 8 cut(s) 733, 1474, 1593, 1692, 2032, 2039, 2082, 2603
RsaNI GTAC 8 cut(s) 732, 1473, 1592, 1691, 2031, 2038, 2081, 2602
RseI CAYNNNNRTG 1 cut(s) 887
SacI GAGCTC 1 cut(s) 194
SatI GCNGC 5 cut(s) 636, 1399, 1402, 1746, 2553
Sau96I GGNCC 3 cut(s) 91, 274, 712
SchI GAGTC 3 cut(s) 270, 1423, 1965
ScrFI CCNGG 3 cut(s) 196, 293, 1855
SduI GDGCHC 3 cut(s) 194, 960, 1934
SfaNI GCATC 8 cut(s) 259, 1197, 1269, 1413, 2161, 2275, 2287, 2760
SinI GGWCC 2 cut(s) 91, 274
SmiMI CAYNNNNRTG 1 cut(s) 887
SmlI CTYRAG 2 cut(s) 369, 842
SmoI CTYRAG 2 cut(s) 369, 842
SseBI AGGCCT 1 cut(s) 291
SsiI CCGC 7 cut(s) 4, 181, 512, 1020, 1266, 1398, 1755
SspI AATATT 1 cut(s) 57
SspMI CTAG 9 cut(s) 108, 669, 677, 1382, 1418, 1586, 2162, 2222, 2932
SstI GAGCTC 1 cut(s) 194
StuI AGGCCT 1 cut(s) 291
StyD4I CCNGG 3 cut(s) 194, 291, 1853
StyI CCWWGG 2 cut(s) 286, 603
TaaI ACNGT 7 cut(s) 230, 628, 1071, 1080, 1627, 2035, 2290
TaiI ACGT 4 cut(s) 937, 1602, 2502, 2825
TaqI TCGA 8 cut(s) 893, 1286, 1412, 1524, 2052, 2155, 2331, 2763
TatI WGTACW 2 cut(s) 2037, 2601
TauI GCSGC 1 cut(s) 1401
TfiI GAWTC 4 cut(s) 1582, 2677, 2732, 2858
TscAI CASTG 6 cut(s) 832, 1233, 1258, 1630, 2142, 2281
TseFI GTSAC 3 cut(s) 232, 262, 2129
TseI GCWGC 4 cut(s) 635, 1401, 1745, 2552
Tsp45I GTSAC 3 cut(s) 232, 262, 2129
TspGWI ACGGA 1 cut(s) 2744
TspRI CASTG 6 cut(s) 832, 1233, 1258, 1630, 2142, 2281
Van91I CCANNNNNTGG 3 cut(s) 292, 389, 2564
VpaK11BI GGWCC 2 cut(s) 91, 274
VspI ATTAAT 1 cut(s) 858
XapI RAATTY 8 cut(s) 375, 519, 795, 869, 1216, 1351, 2046, 2231
XbaI TCTAGA 1 cut(s) 1417
XceI RCATGY 5 cut(s) 2092, 2184, 2453, 2717, 2850
XcmI CCANNNNNNNNNTGG 1 cut(s) 293
XmnI GAANNNNTTC 1 cut(s) 2210
XspI CTAG 9 cut(s) 108, 669, 677, 1382, 1418, 1586, 2162, 2222, 2932
Zsp2I ATGCAT 1 cut(s) 87
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.